CSPI01G15780 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI01G15780
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	RNA-binding Musashi
Location	Chr1 : 11302284 .. 11307026 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTAATTTTCGTACGCGCAAGACAACCAAGTCTTTCTTTTCTCTTTTCTTTCTCTCTCTACCTATACATATATAATTATAATTGTGTGTATATGTAATTTGTTATATATTTAGATGCAAATATTGCGCCCATTCCAGATGCAAATTCCTTTTCTTACACAAATATCTTTCTCCTTCTCTCTGTTTCATATATAGCCTTCAATCGTTTATTTGGTATTGCATATTTATCTAGAACAAAAACCAAAACAGTAACTGGAACAAGGAAAGAGATAGGAAAAAAGGAGGGCCTCTCGCCCTCTCTTCTTATTATGCCTTCTCTTAGATCTTAGATTCTAGAGTTCCCAACTGGGTCGTTTTCATTTCGGTAAGTTTCTCTTCTTTTCTCTGCAAATCATTTTCTTTCTTCAATCTTCCTACTTCATTTCTTTTCTGGGTTTTGAATCAAAACTCATTTCTTCCGAATTTTAACCTTTCTTCTTTGTTGGGGTTCATTCCTTTTATGTGCTTTTAGCTTTTGAGGATTCCTTGTTTGTAGATCGATCGATTTTTCTGATCGGTGGACGCTCCGATGCTTTGAGATCGAATCTGATTTCAATCATTCTCTATCTAACAATAAGAGCATTTTCCATTTTGATGACGATTTTGTGTTTTTCTTTTTCATAACATCTGTTTAATTTAGCTCGCATTGCCGTGTTTCTTAAATGAATGTTTCTTTTTCAATCCTAGCTTCAATTCTATTCCCCTTCTAATGTAAGCAAAACTGTTCCATAGATATCTGTATTGTTTTTGTATAGCCTTCTGTTTTTCCTCAGCTTGGATTGATCGGCTTTCTGGCTTCTTCTTCTCAAGCCGATTGGATTAGACTTTAAGATATGCGATTGCTGTGTGCCGTATGCACTCTTATTGCTGAATGATACTGATGGGATTGGTTGCAATGGATTTGTAGAGTGGGCATGGATCCTGGCAAGCTTTTCATTGGTGGTATTTCGTGGGACACAGATGAAGATCGTCTTCGGGAGTACTTTCGGAACTTTGGAGAAGTGGTGGAGGTGATGATCATGAGGGATCGGGCCACCGGCCGTGCCCGTGGCTTTGGATTCGTTGTCTTTGCTGACCCTGTTGCTGCAGCGAGAGTTGTATTGGAAAAACATGTAATTGATGGAAGAACTGTAAGTCTTGTGTATTCTACTTTATTTTCATTGGTTTTTCCACCTGTATTAGAAGCTTTAGATGTCTTTCAAAGAATGTTCCAGTGTGTCTTCAGATTCAATTTTGTGGATTAAATATACTCGTGGAGGGATCAAGGTTTTCCTGATATCTTTTGGTGTTCCTCATGATCCGAACTTATTAGAATTCTTCAGCATTTATATACTAAATCTCTTTTATCTCGATAATTCATAGTTTTCCTTCACAGCATGAAGGGGAAGATTCGGCTGTTCACAATTTAATTGGGCAATTTCTGTTTCATGTGAAATGATGACCATGTTTTTGTGGAAGTATGATGCCAATGTATGTACTTGGGTTGCCTTCATATGTCCTGGGTATATGTACAAACATTTATATATCAAATCAATACTGTGAGAGGGCTTTGGTCCTTCGATAAATTTGCAAATTTTTGTGTAGAAAGAAGTCTATCGTAATCTTCCTTAGTAGTCCTCAATGTAAAATGACCTTACTTGAACAGGATTTGTTCTATAGGTTGTACATCTATATCCTTGAGTTCTTAAGTAGTCCTCAATGTGAAACAATGAGTTGTGTATATTAGGAGGCTCGTTATCTTGTTGAGTTTGTCATGGACATTAAGCTTTATGTGTGATGGCTTCCACGTGTGTTAAAAAGATACGTTTTGTTGCTTCCAGACCTTTATGTGTATTGGTAAAGAAAGTAAATTCTATCATTTCCATGTTTTGATGTTAGTTTTTTTTGTCTTCTTTTTTCTTTTGTTCAGGTTGAAGCAAAGAAGGCGGTTCCTCGAGATGATCAAAACATTTTGAGCAGGAATAATACTGGTATTCTTGGATCACCTGGTCCTACTCGCACAAAGAAGATATTTGTTGGAGGATTGGCATCAACTGTTACAGAGAGTGACTTCAAAAAGTATTTTGATCAGTTTGGTACAATCGTAGATGTCGTTGTGATGTATGATCATAATACTCAAAGACCAAGAGGTTTTGGATTTATCACTTACGAGTCGGAGGAATCGGTGGAGAAAGTGTTATACAAAACTTTTCATGAACTCAATGGAAAAATGGTTGAGGTTAAGAGGGCTGTTCCCAAGGAATCATCACCAGTGCCAAATCGAAATCAATTAGCTGGATATCCTTTCAATTTTGGTAGAGTTGGTAGCTATTTAAATGGCTATAATCAAGGATATAATCCAACCGCAGTTGGGGGATATGGATTGAGATCTGATGGTAGATTTAGTCCTGTTACAGTTGGTCGGGGTGGCCTTTCTCCAATTAGTCCTGGTTATGGAATGGGGCTAAATCTTGAAACAGGCTTGAACCCCAACTATGGGACAGGTCCCAATGTTAGCTCTAACCTCAGCTATGGACGAGTAATGAGCCCCTCGTACAGTGGAAATTTAAATAGGTACGGTAGCCCAAACCCCATGGTATATAGTGGTGGTGGAGGTAATGGTTCTATTTTAAGCTCGTCGGTTCAGAATCTGTGGGGAAACGTCAGTACCTCTGCTGGTACAAACTCCTCACACTTGAGGACTTTTCCTGGCTCTGGTGGTGTGCATACAGGAACTAGTTCATTAAACAATATCGGAGGGCTTTGGGGTGCTTCTGCAAGTTTAGGTCATGGGGAAAATGCTGGTTCTTCATTCAATACTGTTAATCTTGACTTCGGAAACGGAGATGCCAGCTTTACATCAGGAACAACTGTAGGTTATGCTAGAAGCATTGGAACTAATGTTTCCTCAGCATCTTTGTACTCTGCACCAAATATTTATGATGAGGTTCATGGGAATAATGATGAAGGAAACACATTTTATGGGCATTCCAGTTGGCAGTCGTTGCCAACAGAGCTTGAGGATTCTTCCTCAATTGGTTTTGGCCTTGGCAATGCAGCTTCAGATGTTATTAGTAGAAACAATGCTGGTTATACTGTTGGATACGGTGTTTCTAATAGACAATCTAATAGAGGTGAGTTTTTTTACTTCAAAGAAAACTTTGAATATTTTAAAGTTTTTCTTTCTTTTGCTGCTGTTATTTCTGTAGAAACTTTAGACTTTCAAGATTTTATCACTTTAAACATTATAAAATCAAAAATCAAAACTAAATTATTACGACCTTACTTGAACAAGATTTGATCTGTAGGTTTTACCATAATGTCTTTTTGTTCTAAAGATTGTATATAATACATGGCTTTTTCATATTTATGCTTTTATAGGAGTTTTTCCTGGAATTTCTTACAATCTTCTTATAGAAGTCGGAATATATTTCTTATCCAAAAAAAAAAAGAGAAGTCGGAATATATTAACCTTCGAACCAATGTAATGTACTGTGCACCTTCCAAAGTTGGGAGACCCTATTAACTAACTATTTAGTGAAAAAACTTTTACCTTTTTCTTGGGGATTTTTAATGTTCTTTCCTCCAAAATATTAGACCTGTAAACAATGCCTTCTACCACATGATACTTTTTTATTTTTCTAGCTATCTGAACATAGTTTTATAAAAGCTGTCTAAAAAAACAAAAACAGAGAATCCACACAGAATCAGTCCCTATTCCCTAAGCTTTTCAATGCAAAGTTTGCAAAGTTGACAAGTTTCGTTCTCTGTTGCACAAAAATAAGTTTGCATAGTCACCTACAGAAATAAGAGAAAAAGGAGGCACATTTATTGCCTGCTAATTTGCGAATTAGATCTGTTTCTGTTTGGTTGTGTTATAATTAAAATATATGATCTTCGGCAGAACATGTATAAGTTATTTGCTGAATATCTGTCGTAGTTTGGGAAGTGTCCAAATCTCACTTAGACAAACGTAGGTTTAACAATATAAAACTAGGCTGATCTTTTTGTTTTGTATGTAAATGTTTTGAATCAGGAATTGCTGCTTAGGAAGAAGATGATACAACAGATGTCAAAAATTATAGTAGGTGATGCGTATTTCAGTAAAGCAGGTGTACTGCAATTTTTCGTATAATTTCGTCCTTGTGATACACTCCCATTTGATACTGTCAGAGCTAATTTGTTTTCTGTTTCACAAACTGTTCCATAAAGAAGCAGGTTCCAGAGGGTTTTCTCTTGGTCAGGATTGAGCTTGAAAATATAGGTCTTTCTTCTTTCTTCTTCTTCTACTTCTACTTCTTTCTTTCCTTCCTTCTTTCTTGTAATTTGATTGATATGTATAATTGGATTGTGGGTAAGGTATATGTGCAGAACTGTTGCATAATACGCTACTCCGAGAAATGATGTCACACGAACGAATCAACATCTTTTTTCTTTTTTTCTCCTTTTCTTTTCGGGTTCGTCTTTCTGAAAAAAGATGCTAGTATTCATCAGGTTTTCTTGTTGTTTGACCTTTTATTAGTCATTCTGGGTTTTTACTTCTCATCTGATTGTATGAAACTGAGGTTGATTAGTGGTGTGATGTTGTCCAGCTTCCCAATTCTTCTTTGTTGTAAATTTAGCTCCCTTTTGAGCTAAACCAAAGTTTTTTAAGCTAAAAAATACTCTTACTTGCAATTGAAAATGTTCTTACTTGCAATTGGAAATGTTTCTTTTTTGCATCCATC

mRNA sequence

ATGGATCCTGGCAAGCTTTTCATTGGTGGTATTTCGTGGGACACAGATGAAGATCGTCTTCGGGAGTACTTTCGGAACTTTGGAGAAGTGGTGGAGGTGATGATCATGAGGGATCGGGCCACCGGCCGTGCCCGTGGCTTTGGATTCGTTGTCTTTGCTGACCCTGTTGCTGCAGCGAGAGTTGTATTGGAAAAACATGTAATTGATGGAAGAACTGTTGAAGCAAAGAAGGCGGTTCCTCGAGATGATCAAAACATTTTGAGCAGGAATAATACTGGTATTCTTGGATCACCTGGTCCTACTCGCACAAAGAAGATATTTGTTGGAGGATTGGCATCAACTGTTACAGAGAGTGACTTCAAAAAGTATTTTGATCAGTTTGGTACAATCGTAGATGTCGTTGTGATGTATGATCATAATACTCAAAGACCAAGAGGTTTTGGATTTATCACTTACGAGTCGGAGGAATCGGTGGAGAAAGTGTTATACAAAACTTTTCATGAACTCAATGGAAAAATGGTTGAGGTTAAGAGGGCTGTTCCCAAGGAATCATCACCAGTGCCAAATCGAAATCAATTAGCTGGATATCCTTTCAATTTTGGTAGAGTTGGTAGCTATTTAAATGGCTATAATCAAGGATATAATCCAACCGCAGTTGGGGGATATGGATTGAGATCTGATGGTAGATTTAGTCCTGTTACAGTTGGTCGGGGTGGCCTTTCTCCAATTAGTCCTGGTTATGGAATGGGGCTAAATCTTGAAACAGGCTTGAACCCCAACTATGGGACAGGTCCCAATGTTAGCTCTAACCTCAGCTATGGACGAGTAATGAGCCCCTCGTACAGTGGAAATTTAAATAGGTACGGTAGCCCAAACCCCATGGTATATAGTGGTGGTGGAGGTAATGGTTCTATTTTAAGCTCGTCGGTTCAGAATCTGTGGGGAAACGTCAGTACCTCTGCTGGTACAAACTCCTCACACTTGAGGACTTTTCCTGGCTCTGGTGGTGTGCATACAGGAACTAGTTCATTAAACAATATCGGAGGGCTTTGGGGTGCTTCTGCAAGTTTAGGTCATGGGGAAAATGCTGGTTCTTCATTCAATACTGTTAATCTTGACTTCGGAAACGGAGATGCCAGCTTTACATCAGGAACAACTGTAGGTTATGCTAGAAGCATTGGAACTAATGTTTCCTCAGCATCTTTGTACTCTGCACCAAATATTTATGATGAGGTTCATGGGAATAATGATGAAGGAAACACATTTTATGGGCATTCCAGTTGGCAGTCGTTGCCAACAGAGCTTGAGGATTCTTCCTCAATTGGTTTTGGCCTTGGCAATGCAGCTTCAGATGTTATTAGTAGAAACAATGCTGGTTATACTGTTGGATACGGTGTTTCTAATAGACAATCTAATAGAGGAATTGCTGCTTAG

Coding sequence (CDS)

ATGGATCCTGGCAAGCTTTTCATTGGTGGTATTTCGTGGGACACAGATGAAGATCGTCTTCGGGAGTACTTTCGGAACTTTGGAGAAGTGGTGGAGGTGATGATCATGAGGGATCGGGCCACCGGCCGTGCCCGTGGCTTTGGATTCGTTGTCTTTGCTGACCCTGTTGCTGCAGCGAGAGTTGTATTGGAAAAACATGTAATTGATGGAAGAACTGTTGAAGCAAAGAAGGCGGTTCCTCGAGATGATCAAAACATTTTGAGCAGGAATAATACTGGTATTCTTGGATCACCTGGTCCTACTCGCACAAAGAAGATATTTGTTGGAGGATTGGCATCAACTGTTACAGAGAGTGACTTCAAAAAGTATTTTGATCAGTTTGGTACAATCGTAGATGTCGTTGTGATGTATGATCATAATACTCAAAGACCAAGAGGTTTTGGATTTATCACTTACGAGTCGGAGGAATCGGTGGAGAAAGTGTTATACAAAACTTTTCATGAACTCAATGGAAAAATGGTTGAGGTTAAGAGGGCTGTTCCCAAGGAATCATCACCAGTGCCAAATCGAAATCAATTAGCTGGATATCCTTTCAATTTTGGTAGAGTTGGTAGCTATTTAAATGGCTATAATCAAGGATATAATCCAACCGCAGTTGGGGGATATGGATTGAGATCTGATGGTAGATTTAGTCCTGTTACAGTTGGTCGGGGTGGCCTTTCTCCAATTAGTCCTGGTTATGGAATGGGGCTAAATCTTGAAACAGGCTTGAACCCCAACTATGGGACAGGTCCCAATGTTAGCTCTAACCTCAGCTATGGACGAGTAATGAGCCCCTCGTACAGTGGAAATTTAAATAGGTACGGTAGCCCAAACCCCATGGTATATAGTGGTGGTGGAGGTAATGGTTCTATTTTAAGCTCGTCGGTTCAGAATCTGTGGGGAAACGTCAGTACCTCTGCTGGTACAAACTCCTCACACTTGAGGACTTTTCCTGGCTCTGGTGGTGTGCATACAGGAACTAGTTCATTAAACAATATCGGAGGGCTTTGGGGTGCTTCTGCAAGTTTAGGTCATGGGGAAAATGCTGGTTCTTCATTCAATACTGTTAATCTTGACTTCGGAAACGGAGATGCCAGCTTTACATCAGGAACAACTGTAGGTTATGCTAGAAGCATTGGAACTAATGTTTCCTCAGCATCTTTGTACTCTGCACCAAATATTTATGATGAGGTTCATGGGAATAATGATGAAGGAAACACATTTTATGGGCATTCCAGTTGGCAGTCGTTGCCAACAGAGCTTGAGGATTCTTCCTCAATTGGTTTTGGCCTTGGCAATGCAGCTTCAGATGTTATTAGTAGAAACAATGCTGGTTATACTGTTGGATACGGTGTTTCTAATAGACAATCTAATAGAGGAATTGCTGCTTAG

Homology

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BLAST of CSPI01G15780 vs. Swiss-Prot
Match: RNP1_ARATH (Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana GN=RNP1 PE=1 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 2.3e-60
Identity = 164/447 (36.69%), Postives = 235/447 (52.57%), Query Frame = 1


Query: 2   DPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAARV 61
           D GKLF+GGISW+TDED+LRE+F N+GEV + ++MRD+ TGR RGFGFV+F+DP    RV
Sbjct: 4   DQGKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRV 63

Query: 62  VLEKHVIDGRTVEAKKAVPRDDQNILSR----NNTGILGSPGPTRTKKIFVGGLASTVTE 121
           + EKH ID R V+ K+A+ R++Q +  R    N +   G     +TKKIFVGGL  T+T+
Sbjct: 64  LQEKHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGGLPPTLTD 123

Query: 122 SDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVK 181
            +F++YF+ +G + DV +MYD  T RPRGFGF++++SE++V+ VL+KTFH+L+GK VEVK
Sbjct: 124 EEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHKTFHDLSGKQVEVK 183

Query: 182 RAVPKESSPVPNRNQLAGYPFNFGRVGSYLNGYNQGYNPTAVGGYGLRSDGRF-SPVTVG 241
           RA+PK+++P      + G     G  G Y     QGY        G     RF    +VG
Sbjct: 184 RALPKDANPGGGGRSMGG-----GGSGGY-----QGYGGNESSYDGRMDSNRFLQHQSVG 243

Query: 242 RGGLSPISPGYGMGLNLETGLNPNYGTGPNVSSNLSYGRVMSPSYSGNLNRYGSPNPMVY 301
            G  S  S GYG G          YG G N +   +YG      Y+G+   YG+     Y
Sbjct: 244 NGLPSYGSSGYGAG----------YGNGSNGAGYGAYG-----GYTGSAGGYGAGATAGY 303

Query: 302 SG----GGGNGSILSSSVQNLWGNVSTSAGTNSSHLRTFPGSGGVHTGTSSLNNIGGLWG 361
                 G G GS    + +N W   ++S   N  +     GSG  H+G        G+ G
Sbjct: 304 GATNIPGAGYGSSTGVAPRNSWDTPASSGYGNPGY-----GSGAAHSGY-------GVPG 363

Query: 362 ASASLGHGENAGSSFNTVNLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEV 421
           A+        + S ++     +G       SG+  GY         + + Y         
Sbjct: 364 AAPP----TQSPSGYSNQGYGYGG-----YSGSDSGY--------GNQAAYGVVGGRPSG 396

Query: 422 HGNNDEGN-----TFYGHSSWQSLPTE 435
            G+N+ G+       YG  SW+S P++
Sbjct: 424 GGSNNPGSGGYMGGGYGDGSWRSDPSQ 396

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BLAST of CSPI01G15780 vs. Swiss-Prot
Match: MSI2H_HUMAN (RNA-binding protein Musashi homolog 2 OS=Homo sapiens GN=MSI2 PE=1 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 2.9e-47
Identity = 126/324 (38.89%), Postives = 173/324 (53.40%), Query Frame = 1


Query: 2   DPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAARV 61
           DPGK+FIGG+SW T  D LR+YF  FGE+ E M+MRD  T R+RGFGFV FADP +  +V
Sbjct: 19  DPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKV 78

Query: 62  VLEKH-VIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 121
           + + H  +D +T++ K A PR  Q  +             TRTKKIFVGGL++     D 
Sbjct: 79  LGQPHHELDSKTIDPKVAFPRRAQPKMV------------TRTKKIFVGGLSANTVVEDV 138

Query: 122 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 181
           K+YF+QFG + D ++M+D  T R RGFGF+T+E+E+ VEKV    FHE+N KMVE K+A 
Sbjct: 139 KQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQ 198

Query: 182 PKE-SSPVPNRNQLAGYPF-------NFGRVG--SYLNGYNQGYNPTAVGGYGLRSDGRF 241
           PKE   P   R +  G P+         G +G  +++  Y +GY P     YG +  G F
Sbjct: 199 PKEVMFPPGTRGRARGLPYTMDAFMLGMGMLGYPNFVATYGRGY-PGFAPSYGYQFPG-F 258

Query: 242 SPVTVGRGGLSPISPGYGMGLNLETGLNPNYGTGPNVSSNLS--YGRVMSPSYSGNLNRY 301
                G    + ++   G G N      P    G N    ++  YG     S  GN    
Sbjct: 259 PAAAYGPVAAAAVAAARGSGSN---PARPGGFPGANSPGPVADLYGPASQDSGVGNYISA 318

Query: 302 GSPNPMVYSGGGGNGSILSSSVQN 313
            SP P    G G  G +++++  N
Sbjct: 319 ASPQPGSGFGHGIAGPLIATAFTN 325

[Close]

BLAST of CSPI01G15780 vs. Swiss-Prot
Match: MSI2H_MOUSE (RNA-binding protein Musashi homolog 2 OS=Mus musculus GN=Msi2 PE=1 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 2.5e-46
Identity = 134/350 (38.29%), Postives = 182/350 (52.00%), Query Frame = 1


Query: 2   DPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAARV 61
           DPGK+FIGG+SW T  D LR+YF  FGE+ E M+MRD  T R+RGFGFV FADP +  +V
Sbjct: 19  DPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKV 78

Query: 62  VLEKH-VIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 121
           + + H  +D +T++ K A PR  Q  +             TRTKKIFVGGL++     D 
Sbjct: 79  LGQPHHELDSKTIDPKVAFPRRAQPKMV------------TRTKKIFVGGLSANTVVEDV 138

Query: 122 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 181
           K+YF+QFG + D ++M+D  T R RGFGF+T+E+E+ VEKV    FHE+N KMVE K+A 
Sbjct: 139 KQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQ 198

Query: 182 PKE-SSPVPNRNQLAGYPF-------NFGRVG--SYLNGYNQGYNPTAVGGYGLRSDGRF 241
           PKE   P   R +  G P+         G +G  +++  Y +GY P     YG +  G F
Sbjct: 199 PKEVMFPPGTRGRARGLPYTMDAFMLGMGMLGYPNFVATYGRGY-PGFAPSYGYQFPG-F 258

Query: 242 SPVTVGRGGLSPISPGYGMGLNLETGLNPNYGTGPNVSSNLSYGRVMSPSYSGNLNRYGS 301
                G    + ++   G  LN       +Y   PN      +G   SP+ S        
Sbjct: 259 PAAAYGPVAAAAVAAARGSVLN-------SYSAQPN------FGAPASPAGS-------- 318

Query: 302 PNPMVYSGGGGNGSILSSSVQNLWGNVSTSAGTNS--SHLRTFPGSGGVH 339
            NP     GG  G+     V +L+G  S  +G  +  S     PGSG  H
Sbjct: 319 -NPA--RPGGFPGANSPGPVADLYGPASQDSGVGNYISAASPQPGSGFGH 330

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BLAST of CSPI01G15780 vs. Swiss-Prot
Match: DAZP1_MOUSE (DAZ-associated protein 1 OS=Mus musculus GN=Dazap1 PE=1 SV=2)

HSP 1 Score: 180.6 bits (457), Expect = 3.9e-44
Identity = 110/292 (37.67%), Postives = 155/292 (53.08%), Query Frame = 1


Query: 4   GKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAARVVL 63
           GKLF+GG+ W T ++ LR YF  +GEVV+ +IM+D+ T ++RGFGFV F DP     V+ 
Sbjct: 10  GKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 69

Query: 64  EK-HVIDGRTVEAKKAVPRDDQNILSRNNTGILGSP--GPTRTKKIFVGGLASTVTESDF 123
            + H +DGR ++ K   PR  Q   +R   G    P    +++ KIFVGG+     E++ 
Sbjct: 70  SRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGETEL 129

Query: 124 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 183
           ++YF +FG + +VV++YD   QRPRGFGFIT+E E+SV++ +   FH++ GK VEVKRA 
Sbjct: 130 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 189

Query: 184 PKESSPVPNRNQLAGYP----FNFGRVGSYLNG--------YNQGYNP--------TAVG 243
           P++S     +NQ  G P    +      S  NG        + QGY P         A+G
Sbjct: 190 PRDS-----KNQAPGQPGASQWGSRVAPSAANGWAGQPPPTWQQGYGPQGMWVPAGQAIG 249

Query: 244 GYGLRSDGRFSP----------VTVGRGGLSP---ISPGYGMGLNLETGLNP 260
           GYG    GR +P          V+   GG  P      GYG       G  P
Sbjct: 250 GYGPPPAGRGAPPPPPPFTSYIVSTPPGGFPPPQGFPQGYGAPPQFSFGYGP 296

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BLAST of CSPI01G15780 vs. Swiss-Prot
Match: MSI1H_HUMAN (RNA-binding protein Musashi homolog 1 OS=Homo sapiens GN=MSI1 PE=1 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 5.1e-44
Identity = 103/236 (43.64%), Postives = 140/236 (59.32%), Query Frame = 1


Query: 2   DPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAARV 61
           DP K+FIGG+SW T ++ LREYF  FGEV E ++MRD  T R+RGFGFV F D     +V
Sbjct: 18  DPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKV 77

Query: 62  VLE-KHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 121
           + + +H +D +T++ K A PR  Q  +             TRTKKIFVGGL+   T  D 
Sbjct: 78  LAQSRHELDSKTIDPKVAFPRRAQPKMV------------TRTKKIFVGGLSVNTTVEDV 137

Query: 122 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 181
           K+YF+QFG + D ++M+D  T R RGFGF+T+ESE+ VEKV    FHE+N KMVE K+A 
Sbjct: 138 KQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQ 197

Query: 182 PKE----SSPVPNRNQLAGYPFNFGRVGSYLNGYNQGYNPTAVGGYGLRSDGRFSP 233
           PKE    +     R+++  Y  +   +G  + GY  G+  T    Y  RS    +P
Sbjct: 198 PKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGY-PGFQATT---YASRSYTGLAP 237

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BLAST of CSPI01G15780 vs. TrEMBL
Match: A0A0A0LTE8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G181500 PE=4 SV=1)

HSP 1 Score: 943.3 bits (2437), Expect = 1.1e-271
Identity = 477/477 (100.00%), Postives = 477/477 (100.00%), Query Frame = 1


Query: 1   MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAAR 60
           MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAAR
Sbjct: 1   MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAAR 60

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF
Sbjct: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120

Query: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV
Sbjct: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180

Query: 181 PKESSPVPNRNQLAGYPFNFGRVGSYLNGYNQGYNPTAVGGYGLRSDGRFSPVTVGRGGL 240
           PKESSPVPNRNQLAGYPFNFGRVGSYLNGYNQGYNPTAVGGYGLRSDGRFSPVTVGRGGL
Sbjct: 181 PKESSPVPNRNQLAGYPFNFGRVGSYLNGYNQGYNPTAVGGYGLRSDGRFSPVTVGRGGL 240

Query: 241 SPISPGYGMGLNLETGLNPNYGTGPNVSSNLSYGRVMSPSYSGNLNRYGSPNPMVYSGGG 300
           SPISPGYGMGLNLETGLNPNYGTGPNVSSNLSYGRVMSPSYSGNLNRYGSPNPMVYSGGG
Sbjct: 241 SPISPGYGMGLNLETGLNPNYGTGPNVSSNLSYGRVMSPSYSGNLNRYGSPNPMVYSGGG 300

Query: 301 GNGSILSSSVQNLWGNVSTSAGTNSSHLRTFPGSGGVHTGTSSLNNIGGLWGASASLGHG 360
           GNGSILSSSVQNLWGNVSTSAGTNSSHLRTFPGSGGVHTGTSSLNNIGGLWGASASLGHG
Sbjct: 301 GNGSILSSSVQNLWGNVSTSAGTNSSHLRTFPGSGGVHTGTSSLNNIGGLWGASASLGHG 360

Query: 361 ENAGSSFNTVNLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEGN 420
           ENAGSSFNTVNLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEGN
Sbjct: 361 ENAGSSFNTVNLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEGN 420

Query: 421 TFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGIAA 478
           TFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGIAA
Sbjct: 421 TFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGIAA 477

[Close]

BLAST of CSPI01G15780 vs. TrEMBL
Match: A0A061GHM1_THECC (RNA-binding family protein isoform 1 OS=Theobroma cacao GN=TCM_030384 PE=4 SV=1)

HSP 1 Score: 598.6 bits (1542), Expect = 6.7e-168
Identity = 316/479 (65.97%), Postives = 377/479 (78.71%), Query Frame = 1


Query: 1   MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAAR 60
           M+ GKLFIGGISWDT+EDRLREYF+ FG+VVE +IMRDRATGRARGFGFVVFADP  A R
Sbjct: 3   MELGKLFIGGISWDTNEDRLREYFQAFGDVVEAVIMRDRATGRARGFGFVVFADPAIAER 62

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VV+EKH+IDGRTVEAKKAVPRDDQNIL+++N  I GSPGP RTKKIFVGGLASTVTESDF
Sbjct: 63  VVMEKHMIDGRTVEAKKAVPRDDQNILNKSNVSIHGSPGPARTKKIFVGGLASTVTESDF 122

Query: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           K+YFDQFGTI DVVVMYDHNTQRPRGFGFITY+SEE+V+KVL +TFHELNGKMVEVKRAV
Sbjct: 123 KRYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLQRTFHELNGKMVEVKRAV 182

Query: 181 PKESSPVPNRNQLAGYPFNFGRVGSYLNGYNQGYNPTAVGGYGLRSDGRFSPVTVGRGGL 240
           PKESSP P+RNQL GY F   RV S+LNGY QGYN ++VGGYG R +GRFSPVT GR G 
Sbjct: 183 PKESSPGPSRNQLGGYNFGLSRVNSFLNGYMQGYNTSSVGGYGFRMEGRFSPVTAGRSGF 242

Query: 241 SPISPGYGMGLNLETGLNPNYGTGPNVSSNLSYGRVMSPSYSGNLNRYGSPNPMVYSGG- 300
            P+SPGYGMGLN E+ L+P+YG   N+ SNLSYGR +  S++GN NR+GS  P  Y GG 
Sbjct: 243 PPLSPGYGMGLNFESNLSPSYGGSSNLGSNLSYGRGLYTSFNGNSNRFGS--PFGYGGGS 302

Query: 301 GGNGSILSSSVQNLWGNVSTSAGTNSSHLRTFPGSGGVHTGTSSLNNIGGLWGASASLGH 360
           GGN SIL+S+ +N+WGN S +  TNS+      GSG  ++G SS  +IG LW +S SLG 
Sbjct: 303 GGNSSILNSAGRNMWGNGSFNYATNSTTSSAIVGSGSGNSGVSSFGSIGALWDSSPSLGQ 362

Query: 361 GENAGSSFNTVNLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPN-IYDEVHGNNDE 420
           G  A S++N  NL +G+GD    SG  +GY R+  +NV+  S + A N  YD  + N  E
Sbjct: 363 GGGAASAYNGGNLRYGSGDFGVGSG-GIGYGRN--SNVAQLSTHGASNGGYDGAYANIYE 422

Query: 421 GNTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGIAA 478
             +FYG S+W+S P++LE SSS GFGLG+A+SDV++ N+A Y  GY V+NRQ+NRGIAA
Sbjct: 423 NGSFYGDSTWRSSPSDLERSSSFGFGLGDASSDVMTNNSADYIGGYSVTNRQANRGIAA 476

[Close]

BLAST of CSPI01G15780 vs. TrEMBL
Match: A0A061GGB0_THECC (RNA-binding family protein isoform 3 OS=Theobroma cacao GN=TCM_030384 PE=4 SV=1)

HSP 1 Score: 594.7 bits (1532), Expect = 9.7e-167
Identity = 313/479 (65.34%), Postives = 376/479 (78.50%), Query Frame = 1


Query: 1   MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAAR 60
           M+ GKLFIGGISWDT+EDRLREYF+ FG+VVE +IMRDRATGRARGFGFVVFADP  A R
Sbjct: 3   MELGKLFIGGISWDTNEDRLREYFQAFGDVVEAVIMRDRATGRARGFGFVVFADPAIAER 62

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VV+EKH+IDGRTVEAKKAVPRDDQNIL+++N  I GSPGP RTKKIFVGGLASTVTESDF
Sbjct: 63  VVMEKHMIDGRTVEAKKAVPRDDQNILNKSNVSIHGSPGPARTKKIFVGGLASTVTESDF 122

Query: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           K+YFDQFGTI DVVVMYDHNTQRPRGFGFITY+SEE+V+KVL +TFHELNGKMVEVKRAV
Sbjct: 123 KRYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLQRTFHELNGKMVEVKRAV 182

Query: 181 PKESSPVPNRNQLAGYPFNFGRVGSYLNGYNQGYNPTAVGGYGLRSDGRFSPVTVGRGGL 240
           PKESSP P+RNQL GY F   RV S+LNGY QGYN ++VGGYG R +GRFSPVT GR G 
Sbjct: 183 PKESSPGPSRNQLGGYNFGLSRVNSFLNGYMQGYNTSSVGGYGFRMEGRFSPVTAGRSGF 242

Query: 241 SPISPGYGMGLNLETGLNPNYGTGPNVSSNLSYGRVMSPSYSGNLNRYGSPNPMVYSGG- 300
            P+SPGYGMGLN E+ L+P+YG   N+ SNLSYGR +  S++GN NR+GS  P  Y GG 
Sbjct: 243 PPLSPGYGMGLNFESNLSPSYGGSSNLGSNLSYGRGLYTSFNGNSNRFGS--PFGYGGGS 302

Query: 301 GGNGSILSSSVQNLWGNVSTSAGTNSSHLRTFPGSGGVHTGTSSLNNIGGLWGASASLGH 360
           GGN SIL+S+ +N+WGN S +  TNS+      GSG  ++G SS  +IG LW +S SLG 
Sbjct: 303 GGNSSILNSAGRNMWGNGSFNYATNSTTSSAIVGSGSGNSGVSSFGSIGALWDSSPSLGQ 362

Query: 361 GENAGSSFNTVNLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPN-IYDEVHGNNDE 420
           G  A S++N  NL +G+GD    SG  +GY R+  +NV+  S + A N  YD  + N  E
Sbjct: 363 GGGAASAYNGGNLRYGSGDFGVGSG-GIGYGRN--SNVAQLSTHGASNGGYDGAYANIYE 422

Query: 421 GNTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGIAA 478
             +FYG S+W+S P++LE SSS GFGLG+A+SDV++ N+A Y  GY V+NRQ+NRG+ +
Sbjct: 423 NGSFYGDSTWRSSPSDLERSSSFGFGLGDASSDVMTNNSADYIGGYSVTNRQANRGMTS 476

[Close]

BLAST of CSPI01G15780 vs. TrEMBL
Match: A0A061GIB9_THECC (RNA-binding family protein isoform 5 OS=Theobroma cacao GN=TCM_030384 PE=4 SV=1)

HSP 1 Score: 594.3 bits (1531), Expect = 1.3e-166
Identity = 313/478 (65.48%), Postives = 375/478 (78.45%), Query Frame = 1


Query: 1   MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAAR 60
           M+ GKLFIGGISWDT+EDRLREYF+ FG+VVE +IMRDRATGRARGFGFVVFADP  A R
Sbjct: 3   MELGKLFIGGISWDTNEDRLREYFQAFGDVVEAVIMRDRATGRARGFGFVVFADPAIAER 62

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VV+EKH+IDGRTVEAKKAVPRDDQNIL+++N  I GSPGP RTKKIFVGGLASTVTESDF
Sbjct: 63  VVMEKHMIDGRTVEAKKAVPRDDQNILNKSNVSIHGSPGPARTKKIFVGGLASTVTESDF 122

Query: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           K+YFDQFGTI DVVVMYDHNTQRPRGFGFITY+SEE+V+KVL +TFHELNGKMVEVKRAV
Sbjct: 123 KRYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLQRTFHELNGKMVEVKRAV 182

Query: 181 PKESSPVPNRNQLAGYPFNFGRVGSYLNGYNQGYNPTAVGGYGLRSDGRFSPVTVGRGGL 240
           PKESSP P+RNQL GY F   RV S+LNGY QGYN ++VGGYG R +GRFSPVT GR G 
Sbjct: 183 PKESSPGPSRNQLGGYNFGLSRVNSFLNGYMQGYNTSSVGGYGFRMEGRFSPVTAGRSGF 242

Query: 241 SPISPGYGMGLNLETGLNPNYGTGPNVSSNLSYGRVMSPSYSGNLNRYGSPNPMVYSGG- 300
            P+SPGYGMGLN E+ L+P+YG   N+ SNLSYGR +  S++GN NR+GS  P  Y GG 
Sbjct: 243 PPLSPGYGMGLNFESNLSPSYGGSSNLGSNLSYGRGLYTSFNGNSNRFGS--PFGYGGGS 302

Query: 301 GGNGSILSSSVQNLWGNVSTSAGTNSSHLRTFPGSGGVHTGTSSLNNIGGLWGASASLGH 360
           GGN SIL+S+ +N+WGN S +  TNS+      GSG  ++G SS  +IG LW +S SLG 
Sbjct: 303 GGNSSILNSAGRNMWGNGSFNYATNSTTSSAIVGSGSGNSGVSSFGSIGALWDSSPSLGQ 362

Query: 361 GENAGSSFNTVNLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPN-IYDEVHGNNDE 420
           G  A S++N  NL +G+GD    SG  +GY R+  +NV+  S + A N  YD  + N  E
Sbjct: 363 GGGAASAYNGGNLRYGSGDFGVGSG-GIGYGRN--SNVAQLSTHGASNGGYDGAYANIYE 422

Query: 421 GNTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGIA 477
             +FYG S+W+S P++LE SSS GFGLG+A+SDV++ N+A Y  GY V+NRQ+NRG +
Sbjct: 423 NGSFYGDSTWRSSPSDLERSSSFGFGLGDASSDVMTNNSADYIGGYSVTNRQANRGFS 475

[Close]

BLAST of CSPI01G15780 vs. TrEMBL
Match: A0A067GSP6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g011518mg PE=4 SV=1)

HSP 1 Score: 585.5 bits (1508), Expect = 5.9e-164
Identity = 303/477 (63.52%), Postives = 368/477 (77.15%), Query Frame = 1


Query: 1   MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAAR 60
           M+ GKLFIGGISWDT+EDRLR+YF+ FGEV+E +IM+DRATGRARGFGF+VFADP  A R
Sbjct: 3   MELGKLFIGGISWDTNEDRLRDYFQAFGEVLEAVIMKDRATGRARGFGFIVFADPAVAER 62

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VV++KH+IDGRTVEAKKAVPRDDQNI +RNN+ I GSPGP RTKKIFVGGLASTVTESDF
Sbjct: 63  VVMQKHMIDGRTVEAKKAVPRDDQNIQNRNNSSIHGSPGPARTKKIFVGGLASTVTESDF 122

Query: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           KKYFDQFG I DVVVMYDHNTQRPRGFGFITY+SEE+V+KVL KTFHELNGKMVEVKRAV
Sbjct: 123 KKYFDQFGIITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAV 182

Query: 181 PKESSPVPNRNQLAGYPFNFGRVGSYLNGYNQGYNPTAVGGYGLRSDGRFSPVTVGRGGL 240
           PKE SP P+RNQL  + +   RV S+LNGY Q YNP++VGGYGLR DGR+ PVT+GR G 
Sbjct: 183 PKELSPGPSRNQLGTHNYGLSRVSSFLNGYTQSYNPSSVGGYGLRIDGRYGPVTIGRSGF 242

Query: 241 SPISPGYGMGLNLETGLNPNYGTGPNVSSNLSYGRVMSPSYSGNLNRYGSPNPMVYSGGG 300
           + I PGYGMGLN E  L+P++G G N+S NLSYGR ++PS+ GN NRY SP     +G G
Sbjct: 243 TTIGPGYGMGLNFEPNLSPSHGGGANLSPNLSYGRGLNPSFGGNSNRYSSPG-SYGAGNG 302

Query: 301 GNGSILSSSVQNLWGNVSTSAGTNSSHLRTFPGSGGVHTGTSSLNNIGGLWGASASLGHG 360
           GN S+LSS  +NLWGN + +   N+++   F GSGG  +G  SL ++G LW +S   GHG
Sbjct: 303 GNSSVLSSPSRNLWGNGNLNYALNTANSNAFLGSGGGTSGMGSLGSLGALWDSSPDPGHG 362

Query: 361 ENAGSSFNTVNLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEGN 420
             AG+ +++ NL +GNGD    SG  VGY R+  T+V   S  S    YD  +G+  E  
Sbjct: 363 GGAGAGYSSGNLSYGNGDLVVGSG-AVGYGRNSMTSVPPVS--STKGSYDVAYGDIYESG 422

Query: 421 TFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGIAA 478
           +FYG S+W+   +ELE S S GFG+G  ASDV+++N+AGY  GY V++RQ+NRGIAA
Sbjct: 423 SFYGDSTWRPSSSELEGSGSFGFGVGPTASDVMTKNSAGYVGGYSVTDRQANRGIAA 475

[Close]

BLAST of CSPI01G15780 vs. TAIR10
Match: AT3G07810.2 (AT3G07810.2 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 451.8 bits (1161), Expect = 5.2e-127
Identity = 273/495 (55.15%), Postives = 329/495 (66.46%), Query Frame = 1


Query: 2   DPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAARV 61
           D GKLFIGGISWDT+E+RL+EYF +FGEV+E +I++DR TGRARGFGFVVFADP  A  V
Sbjct: 4   DNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEIV 63

Query: 62  VLEKHVIDGRTVEAKKAVPRDDQNILSRNNTG-ILGSPG-PTRTKKIFVGGLASTVTESD 121
           + EKH IDGR VEAKKAVPRDDQN+++R+N+  I GSPG P RT+KIFVGGL S+VTESD
Sbjct: 64  ITEKHNIDGRLVEAKKAVPRDDQNMVNRSNSSSIQGSPGGPGRTRKIFVGGLPSSVTESD 123

Query: 122 FKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRA 181
           FK YF+QFGT  DVVVMYDHNTQRPRGFGFITY+SEE+VEKVL KTFHELNGKMVEVKRA
Sbjct: 124 FKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMVEVKRA 183

Query: 182 VPKESSPVPNRNQL-AGYPFNFGRVGSYLNGYNQGYNPTAVGGYGLRSDGRFSPVTVGRG 241
           VPKE SP P+R+ L AGY +   RV + LNGY QG+NP AVGGYGLR DGRFSPV  GR 
Sbjct: 184 VPKELSPGPSRSPLGAGYSYGVNRVNNLLNGYAQGFNPAAVGGYGLRMDGRFSPVGAGRS 243

Query: 242 GLSPISPGYGMGLNLETGLNPNYGTGPNVSSNLSYGRVMSPSYSGNLNRYGSPNPMVYSG 301
           G +  S GYGM +N + GL   +  G N + N+ YGR MSP Y GN NR+G         
Sbjct: 244 GFANYSSGYGMNVNFDQGLPTGFTGGTNYNGNVDYGRGMSPYYIGNTNRFGPAVGYEGGN 303

Query: 302 GGGNGSILSSSVQNLWGN---VSTSAGTNSSHLRTFPG--SGGVHTGTSSLNNIGGLWGA 361
           GGGN S  SS  +NLWGN   ++ +    +S+  T+ G  S G +T +    N G  WGA
Sbjct: 304 GGGNSSFFSSVTRNLWGNNGGLNYNNNNTNSNSNTYMGGSSSGNNTLSGPFGNSGVNWGA 363

Query: 362 SASLGHGENAGSSFNTVNLDFGNGDASFTSGTTVGYARSIGTN----VSSASLYSAPNI- 421
               G G NA S+ N      GNG++ F  GT    AR+ G N     SS S  SA N  
Sbjct: 364 P---GGGNNAVSNENVKFGYGGNGESGFGLGTGGYAARNPGANKAAPSSSFSSASATNNT 423

Query: 422 -YD-----EVHGNNDEGNTFYGHSSWQSLPTELEDSSSIGFGLGNA--ASDVISRNNA-G 475
            YD     E +GN       Y   +W+S   E E  +   +G+G    +SDV +R+++ G
Sbjct: 424 GYDTAGLAEFYGN----GAVYSDPTWRSPTPETEGPAPFSYGIGGGVPSSDVSARSSSPG 483

[Close]

BLAST of CSPI01G15780 vs. TAIR10
Match: AT5G47620.4 (AT5G47620.4 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 380.9 bits (977), Expect = 1.1e-105
Identity = 239/506 (47.23%), Postives = 304/506 (60.08%), Query Frame = 1


Query: 1   MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAAR 60
           M+  KLFIGGISW+T EDRLR+YF +FGEV+E +IM+DRATGRARGFGFVVFADP  A R
Sbjct: 3   MESCKLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAER 62

Query: 61  VVLEKHVIDGR----------------------TVEAKKAVPRDDQNILSRNNTGILGSP 120
           VVL KH+IDG+                       VEAKKAVPRDD  + +++N+ + GSP
Sbjct: 63  VVLLKHIIDGKILVDSIVYNQLCRSDKCISLSEVVEAKKAVPRDDHVVFNKSNSSLQGSP 122

Query: 121 GPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESV 180
           GP+ +KKIFVGGLAS+VTE++FKKYF QFG I DVVVMYDH TQRPRGFGFI+Y+SEE+V
Sbjct: 123 GPSNSKKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAV 182

Query: 181 EKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQLAGYPFNFGRVGSYLNGYNQGYNPTA 240
           +KVL KTFHELNGKMVEVK AVPK+ +    RNQ+    F   R+ S LN Y QG++P+ 
Sbjct: 183 DKVLQKTFHELNGKMVEVKLAVPKDMALNTMRNQMNVNSFGTSRISSLLNEYTQGFSPSP 242

Query: 241 VGGYGLRSDGRFSPVTVGRGGLSPISPGYGMGLNLETGLNPNYGTGPNVSSNLSYGRVMS 300
           + GYG++ + R+SP    RGG SP   GYG+ LN E     NYG+G    S+  +GR  S
Sbjct: 243 ISGYGVKPEVRYSPAVGNRGGFSPFGHGYGIELNFEPNQTQNYGSG----SSGGFGRPFS 302

Query: 301 PSYSGNLNRYGSPNPMVYSGGG--GNGSILSSSVQN-LWGNVSTSAGTNSSHLR-TFPGS 360
           P Y+ +L R+GS    + SGG   GNGS+L+++ +N LWGN      +NS   R +F G+
Sbjct: 303 PGYAASLGRFGS---QMESGGASVGNGSVLNAAPKNHLWGNGGLGYMSNSPISRSSFSGN 362

Query: 361 GGVHTGTSSLNNIGGLWGASA---SLGHGENAGSSFNTVNLDFGNGDASFTSGTTVGYAR 420
            G+    SSL +IG  WG  A   S  HGE  G     +    G     ++SG+++    
Sbjct: 363 SGM----SSLGSIGDNWGTVARARSSYHGERGGVGLEAMR---GVHVGGYSSGSSI---- 422

Query: 421 SIGTNVSSASLYSAPNIYDEVHGNNDEGNTFYGHSSWQSLPTELEDSSSIGFGLGNAASD 478
                                     E ++ Y  S W SLP + E+      GLG    D
Sbjct: 423 -------------------------LEADSLYSDSMWLSLPAKAEE------GLGMGPLD 453

[Close]

BLAST of CSPI01G15780 vs. TAIR10
Match: AT4G26650.1 (AT4G26650.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 368.2 bits (944), Expect = 7.5e-102
Identity = 242/500 (48.40%), Postives = 301/500 (60.20%), Query Frame = 1


Query: 2   DPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAARV 61
           D GKLFIGGISWDTDE+RL+EYF  +G++VE +IMRDR TGRARGFGF+VFADP  A RV
Sbjct: 13  DLGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAERV 72

Query: 62  VLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGIL-------GSPGPTRTKKIFVGGLAST 121
           +++KH+IDGRTVEAKKAVPRDDQ +L R+ + +        G+ G  RTKKIFVGGL S+
Sbjct: 73  IMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPMHLISPSHGGNGGGARTKKIFVGGLPSS 132

Query: 122 VTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMV 181
           +TE++FK YFDQFGTI DVVVMYDHNTQRPRGFGFIT++SEESV+ VL+KTFHELNGKMV
Sbjct: 133 ITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHKTFHELNGKMV 192

Query: 182 EVKRAVPKE-SSPVPNRNQLAGYPFNFGRV------GSYLNGYNQGYNPTAVGGYGLRSD 241
           EVKRAVPKE SS  PNR+ L GY  N+G V       SY N +  GYN   +G     S 
Sbjct: 193 EVKRAVPKELSSTTPNRSPLIGYGNNYGVVPNRSSANSYFNSFPPGYNNNNLG-----SA 252

Query: 242 GRFSPVTVGRGGLSPISPGYGMGLNLETGLNPNYGTGPNVSSNLSYGRVMSPSY--SGNL 301
           GRFSP+  GR   S     +G+GLN E  LN N+       + L Y R+    Y  S + 
Sbjct: 253 GRFSPIGSGRNAFS----SFGLGLNQELNLNSNFD-----GNTLGYSRIPGNQYFNSASP 312

Query: 302 NRYGSPNPMVYSGGGGNGSILSSSVQNLWGNVSTSAGTNSSHLRTFPGSGGVHTGTSSLN 361
           NRY SP      G     S  + S ++LWGN S S+G             G + G S  N
Sbjct: 313 NRYNSP-----IGYNRGDSAYNPSNRDLWGNRSDSSGP------------GWNLGVSVGN 372

Query: 362 NIGGLWGASASLGHGENAGSSFNTVNLDFGNGDASFT-SGTTVGYARSIGTNVSSASLYS 421
           N G  WG S+ +      G S+       G+G +  + +G T G+  SIG       LY 
Sbjct: 373 NRGN-WGLSSVVSDNNGYGRSYGA-----GSGLSGLSFAGNTNGFDGSIG------ELY- 432

Query: 422 APNIYDEVHGNNDEGNTFYGHSSW-QSLP-----TELED-SSSIGFGLGNAASDVISRNN 478
                         G++ Y  S+W QS+P      EL+  S S GFG+ N  SD  +  +
Sbjct: 433 -------------RGSSVYSDSTWQQSMPHHQSSNELDGLSRSYGFGIDNVGSDPSANAS 455

[Close]

BLAST of CSPI01G15780 vs. TAIR10
Match: AT5G55550.3 (AT5G55550.3 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 326.2 bits (835), Expect = 3.3e-89
Identity = 229/499 (45.89%), Postives = 293/499 (58.72%), Query Frame = 1


Query: 2   DPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAARV 61
           D GKLFIGGISWDTDE+RLR+YF N+G+VVE +IMRDRATGRARGFGF+VFADP  + RV
Sbjct: 4   DLGKLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERV 63

Query: 62  VLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGI-LGSP---GPTRTKKIFVGGLASTVTE 121
           +++KH+IDGRTVEAKKAVPRDDQ +L R+ + I L SP   G  RTKKIFVGGL S++TE
Sbjct: 64  IMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPIHLMSPVHGGGGRTKKIFVGGLPSSITE 123

Query: 122 SDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVK 181
            +FK YFDQFGTI DVVVMYDHNTQRPRGFGFIT++S+++V++VL+KTFHELNGK+VEVK
Sbjct: 124 EEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLHKTFHELNGKLVEVK 183

Query: 182 RAVPKESSPVPNRNQLAGYPFNFG------RVGSYLNGYNQG---YNPTAVGGYGLRSDG 241
           RAVPKE SPV N         N+G         SY N +  G   YN  ++G  G     
Sbjct: 184 RAVPKEISPVSNIRSPLASGVNYGGGSNRMPANSYFNNFAPGPGFYN--SLGPVG----R 243

Query: 242 RFSPVT-VGRGGLSPISPGYGMGLNLETGLNPNYGTGPNVSSNLSYGRVMSPSY--SGNL 301
           RFSPV   GR  +S     +G+GLN +  LN N  +    SS   Y R+ S  Y    + 
Sbjct: 244 RFSPVIGSGRNAVS----AFGLGLNHDLSLNLN-PSCDGTSSTFGYNRIPSNPYFNGASP 303

Query: 302 NRYGSPNPMVYSGGGGNGSILSSSVQNLWGNVSTSAGTNSSHLRTFPGSGGVHTGTSSLN 361
           NRY SP      G     S  +S+ ++LWGN + +AG             G +   S+ N
Sbjct: 304 NRYTSP-----IGHNRTESPYNSNNRDLWGNRTDTAGP------------GWNLNVSNGN 363

Query: 362 NIGGLWGASASLGHGENAGSSFNTVNLDFGNG---DASFTSGTTVGYARSIGTNVSSASL 421
           N G  WG  +S        S+ +  N  FG      +  +S    G+  SIG       L
Sbjct: 364 NRGN-WGLPSS--------SAVSNDNNGFGRNYGTSSGLSSSPFNGFEGSIG------EL 423

Query: 422 YSAPNIYDEVHGNNDEGNTFYGHSSW--QSLPT----ELED-SSSIGFGLGNAASDVISR 475
           Y   ++Y +              S+W  Q LP+    EL++ S + G+ + N  SD  + 
Sbjct: 424 YRGGSVYSD--------------STWQQQQLPSQSSHELDNLSRAYGYDIDNVGSDPSAN 445

[Close]

BLAST of CSPI01G15780 vs. TAIR10
Match: AT4G14300.1 (AT4G14300.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 234.6 bits (597), Expect = 1.3e-61
Identity = 164/447 (36.69%), Postives = 235/447 (52.57%), Query Frame = 1


Query: 2   DPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAARV 61
           D GKLF+GGISW+TDED+LRE+F N+GEV + ++MRD+ TGR RGFGFV+F+DP    RV
Sbjct: 4   DQGKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRV 63

Query: 62  VLEKHVIDGRTVEAKKAVPRDDQNILSR----NNTGILGSPGPTRTKKIFVGGLASTVTE 121
           + EKH ID R V+ K+A+ R++Q +  R    N +   G     +TKKIFVGGL  T+T+
Sbjct: 64  LQEKHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGGLPPTLTD 123

Query: 122 SDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVK 181
            +F++YF+ +G + DV +MYD  T RPRGFGF++++SE++V+ VL+KTFH+L+GK VEVK
Sbjct: 124 EEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHKTFHDLSGKQVEVK 183

Query: 182 RAVPKESSPVPNRNQLAGYPFNFGRVGSYLNGYNQGYNPTAVGGYGLRSDGRF-SPVTVG 241
           RA+PK+++P      + G     G  G Y     QGY        G     RF    +VG
Sbjct: 184 RALPKDANPGGGGRSMGG-----GGSGGY-----QGYGGNESSYDGRMDSNRFLQHQSVG 243

Query: 242 RGGLSPISPGYGMGLNLETGLNPNYGTGPNVSSNLSYGRVMSPSYSGNLNRYGSPNPMVY 301
            G  S  S GYG G          YG G N +   +YG      Y+G+   YG+     Y
Sbjct: 244 NGLPSYGSSGYGAG----------YGNGSNGAGYGAYG-----GYTGSAGGYGAGATAGY 303

Query: 302 SG----GGGNGSILSSSVQNLWGNVSTSAGTNSSHLRTFPGSGGVHTGTSSLNNIGGLWG 361
                 G G GS    + +N W   ++S   N  +     GSG  H+G        G+ G
Sbjct: 304 GATNIPGAGYGSSTGVAPRNSWDTPASSGYGNPGY-----GSGAAHSGY-------GVPG 363

Query: 362 ASASLGHGENAGSSFNTVNLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEV 421
           A+        + S ++     +G       SG+  GY         + + Y         
Sbjct: 364 AAPP----TQSPSGYSNQGYGYGG-----YSGSDSGY--------GNQAAYGVVGGRPSG 396

Query: 422 HGNNDEGN-----TFYGHSSWQSLPTE 435
            G+N+ G+       YG  SW+S P++
Sbjct: 424 GGSNNPGSGGYMGGGYGDGSWRSDPSQ 396

[Close]

BLAST of CSPI01G15780 vs. NCBI nr
Match: gi|449443534|ref|XP_004139532.1| (PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Cucumis sativus])

HSP 1 Score: 943.3 bits (2437), Expect = 1.6e-271
Identity = 477/477 (100.00%), Postives = 477/477 (100.00%), Query Frame = 1


Query: 1   MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAAR 60
           MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAAR
Sbjct: 1   MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAAR 60

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF
Sbjct: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120

Query: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV
Sbjct: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180

Query: 181 PKESSPVPNRNQLAGYPFNFGRVGSYLNGYNQGYNPTAVGGYGLRSDGRFSPVTVGRGGL 240
           PKESSPVPNRNQLAGYPFNFGRVGSYLNGYNQGYNPTAVGGYGLRSDGRFSPVTVGRGGL
Sbjct: 181 PKESSPVPNRNQLAGYPFNFGRVGSYLNGYNQGYNPTAVGGYGLRSDGRFSPVTVGRGGL 240

Query: 241 SPISPGYGMGLNLETGLNPNYGTGPNVSSNLSYGRVMSPSYSGNLNRYGSPNPMVYSGGG 300
           SPISPGYGMGLNLETGLNPNYGTGPNVSSNLSYGRVMSPSYSGNLNRYGSPNPMVYSGGG
Sbjct: 241 SPISPGYGMGLNLETGLNPNYGTGPNVSSNLSYGRVMSPSYSGNLNRYGSPNPMVYSGGG 300

Query: 301 GNGSILSSSVQNLWGNVSTSAGTNSSHLRTFPGSGGVHTGTSSLNNIGGLWGASASLGHG 360
           GNGSILSSSVQNLWGNVSTSAGTNSSHLRTFPGSGGVHTGTSSLNNIGGLWGASASLGHG
Sbjct: 301 GNGSILSSSVQNLWGNVSTSAGTNSSHLRTFPGSGGVHTGTSSLNNIGGLWGASASLGHG 360

Query: 361 ENAGSSFNTVNLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEGN 420
           ENAGSSFNTVNLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEGN
Sbjct: 361 ENAGSSFNTVNLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEGN 420

Query: 421 TFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGIAA 478
           TFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGIAA
Sbjct: 421 TFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGIAA 477

[Close]

BLAST of CSPI01G15780 vs. NCBI nr
Match: gi|659127261|ref|XP_008463611.1| (PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Cucumis melo])

HSP 1 Score: 911.4 bits (2354), Expect = 6.7e-262
Identity = 462/478 (96.65%), Postives = 467/478 (97.70%), Query Frame = 1


Query: 1   MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAAR 60
           MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDR TGRARGFGFVVFADPVAAAR
Sbjct: 1   MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRTTGRARGFGFVVFADPVAAAR 60

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF
Sbjct: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120

Query: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV
Sbjct: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180

Query: 181 PKESSPVPNRNQLAGYPFNFGRVGSYLNGYNQGYNPTAVGGYGLRSDGRFSPVTVGRGGL 240
           PKESSPVPNRNQLAGYP+NFGRVGSYLNGYNQGYNPT+VGGYGLRSDGRFSPVTVGRGGL
Sbjct: 181 PKESSPVPNRNQLAGYPYNFGRVGSYLNGYNQGYNPTSVGGYGLRSDGRFSPVTVGRGGL 240

Query: 241 SPISPGYGMGLNLETGLNPNYGTGPNVSSNLSYGRVMSPSYSGNLNRYGSPNPMVY-SGG 300
           SPISPGYGMG+NL+TGLNPNYGTGP  SSNLSYGRVMSPSY GNLNRYGSPNPMVY  GG
Sbjct: 241 SPISPGYGMGINLDTGLNPNYGTGP--SSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGG 300

Query: 301 GGNGSILSSSVQNLWGNVSTSAGTNSSHLRTFPGSGGVHTGTSSLNNIGGLWGASASLGH 360
           GGNGSILSSSVQNLWGNVS SAGTNSSHLRTFPGSGGVHTGT+SLNNIGGLWG SASLGH
Sbjct: 301 GGNGSILSSSVQNLWGNVSNSAGTNSSHLRTFPGSGGVHTGTNSLNNIGGLWGTSASLGH 360

Query: 361 GENAGSSFNTVNLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG 420
           GEN GS FNT NLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG
Sbjct: 361 GENGGSPFNTANLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG 420

Query: 421 NTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGIAA 478
           NTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGIAA
Sbjct: 421 NTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGIAA 476

[Close]

BLAST of CSPI01G15780 vs. NCBI nr
Match: gi|1009166919|ref|XP_015901845.1| (PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Ziziphus jujuba])

HSP 1 Score: 598.6 bits (1542), Expect = 9.7e-168
Identity = 313/478 (65.48%), Postives = 376/478 (78.66%), Query Frame = 1


Query: 1   MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAAR 60
           M+PGKLFIGGISWDT+EDRLREYF++FGEVVE +IM+DRATGRARGFGF+VFADP  A +
Sbjct: 3   MEPGKLFIGGISWDTNEDRLREYFQSFGEVVEAVIMKDRATGRARGFGFIVFADPYVAEK 62

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VV EKHVIDGRTVEAKKAVPRDDQN+L+RNN+ ILGSP P RTKKIFVGGLASTVTESDF
Sbjct: 63  VVTEKHVIDGRTVEAKKAVPRDDQNMLNRNNSNILGSPSPARTKKIFVGGLASTVTESDF 122

Query: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           K+YFDQFGTI DVVVMYDHNTQRPRGFGFITY+SE++V+KVLY+TFHELNGKMVEVKRAV
Sbjct: 123 KRYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKVLYRTFHELNGKMVEVKRAV 182

Query: 181 PKESSPVPNRNQLAGYPFNFGRVGSYLNGYNQGYNPTAVGGYGLRSDGRFSPVTVGRGGL 240
           PKE SP PNR QL GY +  GRV S+LNG++QGYN ++VGGY      RFSPV+VGR GL
Sbjct: 183 PKELSPGPNRGQLGGYSYGVGRVTSFLNGFSQGYNSSSVGGY-----SRFSPVSVGRSGL 242

Query: 241 SPISPGYGMGLNLETGLNPNYGTGPNVSSNLSYGRVMSPSYSGNLNRYGSPNPMVYSGG- 300
           S  +PGYG GLN E GL+P+YG   N SSNL+YGR +SPSY+GN  +YGS     Y GG 
Sbjct: 243 SSFNPGYGTGLNFEPGLSPSYGVNANQSSNLNYGRGLSPSYNGNSIKYGS--AAGYGGGN 302

Query: 301 GGNGSILSSSVQNLWGNVSTSAGTNSSHLRTFPGSGGVHTGTSSLNNIGGLWGASASLGH 360
           GGN SIL++  +NLWGN + +   NS++  +F GSG  +TG  S +NIG LWG+S S G 
Sbjct: 303 GGNSSILNTVGRNLWGNGNLNYAANSTNTSSFMGSGSGNTGMGSFSNIGALWGSSPSSGQ 362

Query: 361 GENAGSSFNTVNLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG 420
           G   GS+F++ +L +G+GD SF S   +GY R+ G  V+    Y+  + YD    +  EG
Sbjct: 363 GGGTGSTFSSGSLTYGSGDVSFGS-AGLGYGRNSGAGVTPGLSYATNDGYDGARTDIFEG 422

Query: 421 NTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGIAA 478
            +FYG S+W+S  +ELE S S G+GLGNAASDV+ +N+AGY  GYGV+NRQS RGIAA
Sbjct: 423 GSFYGDSTWRSSQSELEGSVSFGYGLGNAASDVMGKNSAGYVGGYGVANRQSTRGIAA 472

[Close]

BLAST of CSPI01G15780 vs. NCBI nr
Match: gi|590626871|ref|XP_007026291.1| (RNA-binding family protein isoform 1 [Theobroma cacao])

HSP 1 Score: 598.6 bits (1542), Expect = 9.7e-168
Identity = 316/479 (65.97%), Postives = 377/479 (78.71%), Query Frame = 1


Query: 1   MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAAR 60
           M+ GKLFIGGISWDT+EDRLREYF+ FG+VVE +IMRDRATGRARGFGFVVFADP  A R
Sbjct: 3   MELGKLFIGGISWDTNEDRLREYFQAFGDVVEAVIMRDRATGRARGFGFVVFADPAIAER 62

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VV+EKH+IDGRTVEAKKAVPRDDQNIL+++N  I GSPGP RTKKIFVGGLASTVTESDF
Sbjct: 63  VVMEKHMIDGRTVEAKKAVPRDDQNILNKSNVSIHGSPGPARTKKIFVGGLASTVTESDF 122

Query: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           K+YFDQFGTI DVVVMYDHNTQRPRGFGFITY+SEE+V+KVL +TFHELNGKMVEVKRAV
Sbjct: 123 KRYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLQRTFHELNGKMVEVKRAV 182

Query: 181 PKESSPVPNRNQLAGYPFNFGRVGSYLNGYNQGYNPTAVGGYGLRSDGRFSPVTVGRGGL 240
           PKESSP P+RNQL GY F   RV S+LNGY QGYN ++VGGYG R +GRFSPVT GR G 
Sbjct: 183 PKESSPGPSRNQLGGYNFGLSRVNSFLNGYMQGYNTSSVGGYGFRMEGRFSPVTAGRSGF 242

Query: 241 SPISPGYGMGLNLETGLNPNYGTGPNVSSNLSYGRVMSPSYSGNLNRYGSPNPMVYSGG- 300
            P+SPGYGMGLN E+ L+P+YG   N+ SNLSYGR +  S++GN NR+GS  P  Y GG 
Sbjct: 243 PPLSPGYGMGLNFESNLSPSYGGSSNLGSNLSYGRGLYTSFNGNSNRFGS--PFGYGGGS 302

Query: 301 GGNGSILSSSVQNLWGNVSTSAGTNSSHLRTFPGSGGVHTGTSSLNNIGGLWGASASLGH 360
           GGN SIL+S+ +N+WGN S +  TNS+      GSG  ++G SS  +IG LW +S SLG 
Sbjct: 303 GGNSSILNSAGRNMWGNGSFNYATNSTTSSAIVGSGSGNSGVSSFGSIGALWDSSPSLGQ 362

Query: 361 GENAGSSFNTVNLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPN-IYDEVHGNNDE 420
           G  A S++N  NL +G+GD    SG  +GY R+  +NV+  S + A N  YD  + N  E
Sbjct: 363 GGGAASAYNGGNLRYGSGDFGVGSG-GIGYGRN--SNVAQLSTHGASNGGYDGAYANIYE 422

Query: 421 GNTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGIAA 478
             +FYG S+W+S P++LE SSS GFGLG+A+SDV++ N+A Y  GY V+NRQ+NRGIAA
Sbjct: 423 NGSFYGDSTWRSSPSDLERSSSFGFGLGDASSDVMTNNSADYIGGYSVTNRQANRGIAA 476

[Close]

BLAST of CSPI01G15780 vs. NCBI nr
Match: gi|590626877|ref|XP_007026293.1| (RNA-binding family protein isoform 3 [Theobroma cacao])

HSP 1 Score: 594.7 bits (1532), Expect = 1.4e-166
Identity = 313/479 (65.34%), Postives = 376/479 (78.50%), Query Frame = 1


Query: 1   MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAAR 60
           M+ GKLFIGGISWDT+EDRLREYF+ FG+VVE +IMRDRATGRARGFGFVVFADP  A R
Sbjct: 3   MELGKLFIGGISWDTNEDRLREYFQAFGDVVEAVIMRDRATGRARGFGFVVFADPAIAER 62

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VV+EKH+IDGRTVEAKKAVPRDDQNIL+++N  I GSPGP RTKKIFVGGLASTVTESDF
Sbjct: 63  VVMEKHMIDGRTVEAKKAVPRDDQNILNKSNVSIHGSPGPARTKKIFVGGLASTVTESDF 122

Query: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           K+YFDQFGTI DVVVMYDHNTQRPRGFGFITY+SEE+V+KVL +TFHELNGKMVEVKRAV
Sbjct: 123 KRYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLQRTFHELNGKMVEVKRAV 182

Query: 181 PKESSPVPNRNQLAGYPFNFGRVGSYLNGYNQGYNPTAVGGYGLRSDGRFSPVTVGRGGL 240
           PKESSP P+RNQL GY F   RV S+LNGY QGYN ++VGGYG R +GRFSPVT GR G 
Sbjct: 183 PKESSPGPSRNQLGGYNFGLSRVNSFLNGYMQGYNTSSVGGYGFRMEGRFSPVTAGRSGF 242

Query: 241 SPISPGYGMGLNLETGLNPNYGTGPNVSSNLSYGRVMSPSYSGNLNRYGSPNPMVYSGG- 300
            P+SPGYGMGLN E+ L+P+YG   N+ SNLSYGR +  S++GN NR+GS  P  Y GG 
Sbjct: 243 PPLSPGYGMGLNFESNLSPSYGGSSNLGSNLSYGRGLYTSFNGNSNRFGS--PFGYGGGS 302

Query: 301 GGNGSILSSSVQNLWGNVSTSAGTNSSHLRTFPGSGGVHTGTSSLNNIGGLWGASASLGH 360
           GGN SIL+S+ +N+WGN S +  TNS+      GSG  ++G SS  +IG LW +S SLG 
Sbjct: 303 GGNSSILNSAGRNMWGNGSFNYATNSTTSSAIVGSGSGNSGVSSFGSIGALWDSSPSLGQ 362

Query: 361 GENAGSSFNTVNLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPN-IYDEVHGNNDE 420
           G  A S++N  NL +G+GD    SG  +GY R+  +NV+  S + A N  YD  + N  E
Sbjct: 363 GGGAASAYNGGNLRYGSGDFGVGSG-GIGYGRN--SNVAQLSTHGASNGGYDGAYANIYE 422

Query: 421 GNTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGIAA 478
             +FYG S+W+S P++LE SSS GFGLG+A+SDV++ N+A Y  GY V+NRQ+NRG+ +
Sbjct: 423 NGSFYGDSTWRSSPSDLERSSSFGFGLGDASSDVMTNNSADYIGGYSVTNRQANRGMTS 476

The following BLAST results are available for this feature:

BLAST of CSPI01G15780 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RNP1_ARATH	2.3e-60	36.69	Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana GN=RNP1 PE=1 S...	[more]
MSI2H_HUMAN	2.9e-47	38.89	RNA-binding protein Musashi homolog 2 OS=Homo sapiens GN=MSI2 PE=1 SV=1	[more]
MSI2H_MOUSE	2.5e-46	38.29	RNA-binding protein Musashi homolog 2 OS=Mus musculus GN=Msi2 PE=1 SV=1	[more]
DAZP1_MOUSE	3.9e-44	37.67	DAZ-associated protein 1 OS=Mus musculus GN=Dazap1 PE=1 SV=2	[more]
MSI1H_HUMAN	5.1e-44	43.64	RNA-binding protein Musashi homolog 1 OS=Homo sapiens GN=MSI1 PE=1 SV=1	[more]

BLAST of CSPI01G15780 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LTE8_CUCSA	1.1e-271	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G181500 PE=4 SV=1	[more]
A0A061GHM1_THECC	6.7e-168	65.97	RNA-binding family protein isoform 1 OS=Theobroma cacao GN=TCM_030384 PE=4 SV=1	[more]
A0A061GGB0_THECC	9.7e-167	65.34	RNA-binding family protein isoform 3 OS=Theobroma cacao GN=TCM_030384 PE=4 SV=1	[more]
A0A061GIB9_THECC	1.3e-166	65.48	RNA-binding family protein isoform 5 OS=Theobroma cacao GN=TCM_030384 PE=4 SV=1	[more]
A0A067GSP6_CITSI	5.9e-164	63.52	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g011518mg PE=4 SV=1	[more]

BLAST of CSPI01G15780 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G07810.2	5.2e-127	55.15	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G47620.4	1.1e-105	47.23	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G26650.1	7.5e-102	48.40	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G55550.3	3.3e-89	45.89	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G14300.1	1.3e-61	36.69	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

BLAST of CSPI01G15780 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449443534\|ref\|XP_004139532.1\|	1.6e-271	100.00	PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Cucumis sativus]	[more]
gi\|659127261\|ref\|XP_008463611.1\|	6.7e-262	96.65	PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Cucumis melo]	[more]
gi\|1009166919\|ref\|XP_015901845.1\|	9.7e-168	65.48	PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Ziziphus jujuba]	[more]
gi\|590626871\|ref\|XP_007026291.1\|	9.7e-168	65.97	RNA-binding family protein isoform 1 [Theobroma cacao]	[more]
gi\|590626877\|ref\|XP_007026293.1\|	1.4e-166	65.34	RNA-binding family protein isoform 3 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000504	RRM_dom
IPR012677	Nucleotide-bd_a/b_plait_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0000166	nucleotide binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0003723	RNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G15780.1	CSPI01G15780.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 106..164 score: 8.6E-17coord: 6..72 score: 2.2
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 105..177 score: 1.8E-24coord: 5..76 score: 3.9
IPR000504	RNA recognition motif domain	PROFILE	PS50102	RRM	coord: 4..80 score: 18.035coord: 104..181 score: 17
IPR012677	Nucleotide-binding alpha-beta plait domain	GENE3D	G3DSA:3.30.70.330		coord: 99..186 score: 2.6E-25coord: 4..85 score: 9.9
IPR012677	Nucleotide-binding alpha-beta plait domain	unknown	SSF54928	RNA-binding domain, RBD	coord: 100..202 score: 8.19E-27coord: 3..99 score: 1.18
None	No IPR available	PANTHER	PTHR24012	FAMILY NOT NAMED	coord: 103..283 score: 4.4E-165coord: 400..412 score: 4.4E-165coord: 442..477 score: 4.4E-165coord: 2..86 score: 4.4E
None	No IPR available	PANTHER	PTHR24012:SF433	RNA RECOGNITION MOTIF-CONTAINING PROTEIN	coord: 442..477 score: 4.4E-165coord: 103..283 score: 4.4E-165coord: 400..412 score: 4.4E-165coord: 2..86 score: 4.4E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI01G15780	Cla009042	Watermelon (97103) v1	cpiwmB054
CSPI01G15780	Csa1G181500	Cucumber (Chinese Long) v2	cpicuB000
CSPI01G15780	MELO3C025543	Melon (DHL92) v3.5.1	cpimeB016
CSPI01G15780	ClCG01G010610	Watermelon (Charleston Gray)	cpiwcgB025
CSPI01G15780	Lsi02G011240	Bottle gourd (USVL1VR-Ls)	cpilsiB033
CSPI01G15780	MELO3C025543.2	Melon (DHL92) v3.6.1	cpimedB025
CSPI01G15780	CsaV3_1G017060	Cucumber (Chinese Long) v3	cpicucB001
CSPI01G15780	CsaV3_UNG051390	Cucumber (Chinese Long) v3	cpicucB060
CSPI01G15780	Cla97C01G010390	Watermelon (97103) v2	cpiwmbB009
CSPI01G15780	Bhi08G000631	Wax gourd	cpiwgoB036
CSPI01G15780	Cucsa.180480	Cucumber (Gy14) v1	cgycpiB286
CSPI01G15780	CmaCh13G003830	Cucurbita maxima (Rimu)	cmacpiB224
CSPI01G15780	CmaCh18G006000	Cucurbita maxima (Rimu)	cmacpiB403
CSPI01G15780	CmoCh13G004080	Cucurbita moschata (Rifu)	cmocpiB211
CSPI01G15780	CmoCh18G005940	Cucurbita moschata (Rifu)	cmocpiB385
CSPI01G15780	Cp4.1LG20g06600	Cucurbita pepo (Zucchini)	cpecpiB511
CSPI01G15780	Cp4.1LG09g06540	Cucurbita pepo (Zucchini)	cpecpiB017
CSPI01G15780	CsGy1G015480	Cucumber (Gy14) v2	cgybcpiB001
CSPI01G15780	Carg25112	Silver-seed gourd	carcpiB1074
CSPI01G15780	Carg25613	Silver-seed gourd	carcpiB0055

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI01G15780	Cucumber (Gy14) v2	cgybcpiB249
CSPI01G15780	Silver-seed gourd	carcpiB0435
CSPI01G15780	Silver-seed gourd	carcpiB1073
CSPI01G15780	Cucumber (Chinese Long) v3	cpicucB052
CSPI01G15780	Watermelon (97103) v2	cpiwmbB005
CSPI01G15780	Wild cucumber (PI 183967)	cpicpiB039
CSPI01G15780	Cucumber (Gy14) v1	cgycpiB017
CSPI01G15780	Cucurbita maxima (Rimu)	cmacpiB212
CSPI01G15780	Cucurbita moschata (Rifu)	cmocpiB200
CSPI01G15780	Watermelon (Charleston Gray)	cpiwcgB022
CSPI01G15780	Watermelon (97103) v1	cpiwmB050
CSPI01G15780	Cucurbita pepo (Zucchini)	cpecpiB051
CSPI01G15780	Bottle gourd (USVL1VR-Ls)	cpilsiB019
CSPI01G15780	Bottle gourd (USVL1VR-Ls)	cpilsiB038