Bhi08G000631 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi08G000631
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	heterogeneous nuclear ribonucleoprotein 1
Location	chr8 : 25006215 .. 25011287 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATATTGCGCCCATTCCAGATGCAAGTTCCTTTTCTTACACAAATATCTTCCTTCTTCTCTCTGTTTCATATATAGCCTTCATTCGTTTATTTGGTATTGCATATTTATCTAGAACAAAAACCAAAACAGTAACTGGAACAAGGAAAGAGATAGGAAAAAAGGAGGGCCTCTCGCCCTCTCTTCTTATTATGCCTTCTCTTAGATCTTAGATTCTAGAGTTCCCAACTGGGTCGTTTTCATTTGGGTAAGTTTCTTTTTTTCTCTTCATCTCTTCTGTTCTCTGTAAATCATTTGTTTTTTCAATGTTTTTGCACGAATAGTTTTGTGGGTTTTGAATCAAAACTCATTTCTTGGGAATTTTAGCCTTTTTTTTTTTATGGGGTTCATTTCCTTTTTTGTGCCTTTAGCTTTTGTGGATTCCTTGTTTGTAGATCGATCGATTTTTCCTGATCGGTGGACGTTCCGATGCTTTGAGATCGAATCTGATTGCAATCATTTTGTATCTAACAATAAGAGCATTTTCTATTTTGATGATGGTTTTTGTTTTTGTTTTTTATAACATCTGTTTAATTTAGCTCGCATTGTGGTGTTTCTTAAATTAATGTTTCTTTTACAATCGTTGCCTGAATTCTATTCCCCTTCTAATGTAAGCACGGATATCCATATTGTTTTGTATAGTTTTGTGTTTTTCTTCAGCCTGGATTGATCGACTTTGTGGCTTCTTCTTCTCAAGGGGATTGGCTTAGACTTTAAGATATGCGATTGGTGTGTGCTGTATGCATTCGTATTGTTGAATGATATTGATAGGATTAGTTGGAATGGATTTGTAGAGTGGGCATGGATCCTGGCAAGCTTTTCATTGGTGGTATTTCATGGGACACAGATGAAGATCGTCTTCGAGAGTATTTTCAGAGCTTTGGAGAAGTTGTGGAGGTGATGATCATGAGGGATCGGACCACCGGCCGTGCCCGTGGCTTTGGTTTCGTCGTCTTTGCTGACCCTGTTGTTGCAGCAAGAGTTGTATTGGAAAAACATGTAATTGATGGGAGAACTGTAAGTCTTGTGTATTCATCTTGATTCTCGTTGATTTTTCCACCTGTATTGGAAGCTTTAGATGTCTTTCATGGCATGTTCCAGTGTGTTTTCTGATTCGATTTTGCTAATGAATATGCTTGTGGAGGGATCAAGGTTTTCCTGATGTTCTTTGGTCTTCATCATGATTCAAACTTATTAGAATTCTTCTGCATTTGTATTCTAATCTCTTTTATCTTGGTAAACTCATAATTTTCCTTTCGGAGCATGAATGGGAAGATTCGGCTGTTCACATCTTATTAGGACAAGTTCTGTTTCATGTGAAATGAAGTTCATGTTTTTGTGGAAGTATGATGCTGATGTATGTGCTTGGAATGTCAATTGTTTTTTAGAACCAATAGCTTGGATAACATGCTCTTGAAAAGGTAATATGCTTGATCGCAGTAAAAGTATTTATTTGTAGAAGAAAAGGTTTAAGGCTACTTCTAGAATTAGTTTGATAATGAGCAATTTTGGAAAATCTGTTGGGATCATTTACGGGGCTTAGAAGAACACAATTAAGAGTTTTCTCCTTGGCTTTATAGTTTGAATATATAAAGATGGTGGTAGAGAGATCTGAAAGCTATGCTAATTGTCAAATGAAGCGAGTGGTTGGCCTAATTTTTGTTGTTAGAAGCTACATTTTTTGTTTAATTGTCAGCAAGCAATTAGGATGTCTTACAATTACATCTGTATCCTGTGAGCTCTGCCTGGCTATATGCTCACACACATATATATATCAAATCAACACCGTGAGAGGACCATGGTCTTTGGATAAATATGCAAATTTTCGTGTAGAAAGAAATCTATCATAATATTCCTTAGTAGTCCTCAATGTGAAACCATGATTTGTGAAAATTAGGAGGCTTGTTATCTTGTAGAGTTTGTCATGGACATTAGGTTTTATGTGTGATGGCCACCAGTTGTATTAAAAGGATACGTTATGTTGCTTTCAGACTTCTATTTGTATTGGCAATGAGAATAAATTCTATCATTTTCATGTTTTGATGTTCATTTTCTTTTTTTCAGGTTGAAGCAAAGAAGGCTGTTCCTCGAGATGATCAAAACATTTTGAGCAGGAACAATACTGGTATCCTTGGGTCACCCGGTCCTACTCGCACAAAGAAGATATTTGTTGGAGGATTGGCATCAACTGTTACAGAGAGCGACTTCAAAAAGTATTTTGATCAGTTTGGAACAATCGTAGATGTCGTGGTGATGTATGACCATAATACTCAAAGACCAAGAGGTTTTGGATTTATCACTTATGAGTCAGAGGAATCAGTGGAGAAAGTGTTATACAAAACTTTTCATGAACTCAATGGTAAAATGGTTGAGGTTAAGAGGGCTGTTCCAAAGGAATCATCACCGGTGCCAAATCGAAATCAATTAGGTGGTTACCCTTACAATTTTGGTAGAGTCGGTAGCTATTTAAATGGCTATAATCAAGGATATAATCCAACCTCAGTTGGGGGATATGGATTGAGATCTGATGGTAGATTTAGTCCTGTTACAGTCGGTCGGGGTGGACTTTCGCCAATTAGTCCTGGTTATGGAATAGGGCTAAATCTTGATACAGGGTTGAACCCGAACTATGGGACAGGTCCCAATGTTGGCTCTAACCTCAGCTATGGACGGGTAATGAGCCCCTCATATGGTGGAAATTTAAATAGGTACGGTAGCCCAAACCCCATGGTATATGGTGGTGGCAGTGGAGGTAATGGTTCTATTTTAAGCTCATCGGTTCAGAATCTGTGGGGAAATGTCGGTAACTCTGCTGGTACAAACCCCTCACACTTGAGGACTTTTCCTGGCTCTGGTGGTGTGCATACAGGAACTAATTCGTTGAACAGTATTGGAGGGCTTTGGGGTGCTTCTGCAAGTCTAGGTCATGGGGAAAATGCTGGTTCTCCATTCAATACTGCTAATCTCGACTTTGGAAGTGGAGATGCCAGCTTTACATCAGGAACAACTGTAGGTTATGCTAGAAGCATTGGAACTAATGTTTCCTCAGCATCTTTGTACTCTGCACCAAATATTTATGATGAGGTTCATGGGAATAATGATGAAGGGAACACATTTTATGGGCATTCCAGTTGGCAGTCGTTGCCAACAGAGCTTGAGGATTCTTCCTCAATTGGTTTTGGCCTTGGCAATGCAGCTTCAGATGTTATTAGTAGAAACAATGCTGGTTATACTGTTGGATATGGTGTTTCTAATAGACAATCTAATAGAGGTGAGTCTTTCTACTTTCGAGAAAATCTTGTATGTTTTCAAGTTTTTCTTTCTTACTTTTGTTACTTCTCTAGAAACTTTAGACATTCTTCAAGCTTCTATCACTTTAAGCATTATAAAAACTCAAATCAAAATTAGATTATAACAATCGTACTTGAACTAGATCTGATCTATAGGTTGTACCATTGTGTCCTTTAGTTCTAAAGATTGCATAATACATGCCTTCTTCATATTTATGCACTTTTAGGAGTTTTTCCTGGTCTTTCTTTACAATCTTCTTAGAGAAGCCGGAACATATTAACCTCGGAACCAATGTAATGTACTCACACACCTTCCAAAGTTGAGAGAGCCTATTTAGTGAAAGAAAACTTTTAATTTTAGACCAAGACTTCAGTAAAAATATGTTTTATTTCGGATAACTTTATAATTTCTTAGTTTAGTTTATGATGGATGATCTGTTTTCTTGAGGATTTCTAATGTTCTTTCCTCCAAAATATTAGACTTGTAAGCAATGCTTTCTACCACATGATAACTTTTGATTTTTCTAGCTATCTGATCATAATTTTCTAGAAATTGTTTAAAAAACAAAAGCAGAAAATCCATCCAAAAAACAGTCCTTGTTCCCTAAGCTTTTCGATGCAAGTTTGGGAATGTTGACTAGTTTCTTTCTAAGTTACACGAAAATAAGTTTACATAGTCACTTACAGAAATAAGCGAAAAAGGATCATATTTATTGCCTGCTAATTTGCAAATTATTTCTGTTTGTGTTTCGTTGCGGTACAATTAAAATTTATGATCTTCAAAAGGACATTTGAACGTGTATGAGTTACTTGCTGAATATCTGTTGTTGTTAAGGGAAGTGTCCAAATCTCACTTAAACAGACATAGGTTTAACAATATGAAAATAGGCTGATCTTTTTGTTTTGTGTTTAAATGTTTGATTCAGGAATTGCTGCTTAGGAAGAAGATGATACAACAGATTTCAAAAATTATAGTAGGTGATGCGTATTCGATATAGCAGGTGTACTGCAATTTTTCGTATAATTTCGTCATTGTGATACACTCCTATTTGATACTGTCAGAGCTAATTTGTTTTCTGTTTGACAAACTGTCCCATAAAGAAGCAGGTTCCACAGGGTTTTCTCTTGGTCAGGATTGAGCTTGAAAATATAGGTCTTTCTTCTTTCTTCTTCTACTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTGTAATTTGATTGATATGTATAATTGGATTGTGGGTAAGGTATATATGCAGAACTGTTGCATAATACACTACTCCGAGAAACGATGTCACACGAACGAATCAACATCTTTCTTTTCTTTTTTTTTTTTTCCTCCTTTTCTTTTCGGGTCCGTTTTTCTGGGAAAGA

mRNA sequence

ATATTGCGCCCATTCCAGATGCAAGTTCCTTTTCTTACACAAATATCTTCCTTCTTCTCTCTGTTTCATATATAGCCTTCATTCGTTTATTTGGTATTGCATATTTATCTAGAACAAAAACCAAAACAGTAACTGGAACAAGGAAAGAGATAGGAAAAAAGGAGGGCCTCTCGCCCTCTCTTCTTATTATGCCTTCTCTTAGATCTTAGATTCTAGAGTTCCCAACTGGGTCGTTTTCATTTGGTTTTGTGTTTTTCTTCAGCCTGGATTGATCGACTTTGTGGCTTCTTCTTCTCAAGGGGATTGGCTTAGACTTTAAGATATGCGATTGGTGTGTGCTGTATGCATTCGTATTGTTGAATGATATTGATAGGATTAGTTGGAATGGATTTGTAGAGTGGGCATGGATCCTGGCAAGCTTTTCATTGGTGGTATTTCATGGGACACAGATGAAGATCGTCTTCGAGAGTATTTTCAGAGCTTTGGAGAAGTTGTGGAGGTGATGATCATGAGGGATCGGACCACCGGCCGTGCCCGTGGCTTTGGTTTCGTCGTCTTTGCTGACCCTGTTGTTGCAGCAAGAGTTGTATTGGAAAAACATGTAATTGATGGGAGAACTGTTGAAGCAAAGAAGGCTGTTCCTCGAGATGATCAAAACATTTTGAGCAGGAACAATACTGGTATCCTTGGGTCACCCGGTCCTACTCGCACAAAGAAGATATTTGTTGGAGGATTGGCATCAACTGTTACAGAGAGCGACTTCAAAAAGTATTTTGATCAGTTTGGAACAATCGTAGATGTCGTGGTGATGTATGACCATAATACTCAAAGACCAAGAGGTTTTGGATTTATCACTTATGAGTCAGAGGAATCAGTGGAGAAAGTGTTATACAAAACTTTTCATGAACTCAATGGTAAAATGGTTGAGGTTAAGAGGGCTGTTCCAAAGGAATCATCACCGGTGCCAAATCGAAATCAATTAGGTGGTTACCCTTACAATTTTGGTAGAGTCGGTAGCTATTTAAATGGCTATAATCAAGGATATAATCCAACCTCAGTTGGGGGATATGGATTGAGATCTGATGGTAGATTTAGTCCTGTTACAGTCGGTCGGGGTGGACTTTCGCCAATTAGTCCTGGTTATGGAATAGGGCTAAATCTTGATACAGGGTTGAACCCGAACTATGGGACAGGTCCCAATGTTGGCTCTAACCTCAGCTATGGACGGGTAATGAGCCCCTCATATGGTGGAAATTTAAATAGGTACGGTAGCCCAAACCCCATGGTATATGGTGGTGGCAGTGGAGGTAATGGTTCTATTTTAAGCTCATCGGTTCAGAATCTGTGGGGAAATGTCGGTAACTCTGCTGGTACAAACCCCTCACACTTGAGGACTTTTCCTGGCTCTGGTGGTGTGCATACAGGAACTAATTCGTTGAACAGTATTGGAGGGCTTTGGGGTGCTTCTGCAAGTCTAGGTCATGGGGAAAATGCTGGTTCTCCATTCAATACTGCTAATCTCGACTTTGGAAGTGGAGATGCCAGCTTTACATCAGGAACAACTGTAGGTTATGCTAGAAGCATTGGAACTAATGTTTCCTCAGCATCTTTGTACTCTGCACCAAATATTTATGATGAGGTTCATGGGAATAATGATGAAGGGAACACATTTTATGGGCATTCCAGTTGGCAGTCGTTGCCAACAGAGCTTGAGGATTCTTCCTCAATTGGTTTTGGCCTTGGCAATGCAGCTTCAGATGTTATTAGTAGAAACAATGCTGGTTATACTGTTGGATATGGTGTTTCTAATAGACAATCTAATAGAGGAATTGCTGCTTAGGAAGAAGATGATACAACAGATTTCAAAAATTATAGTAGGTGATGCGTATTCGATATAGCAGGTGTACTGCAATTTTTCGTATAATTTCGTCATTGTGATACACTCCTATTTGATACTGTCAGAGCTAATTTGTTTTCTGTTTGACAAACTGTCCCATAAAGAAGCAGGTTCCACAGGGTTTTCTCTTGGTCAGGATTGAGCTTGAAAATATAGGTCTTTCTTCTTTCTTCTTCTACTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTGTAATTTGATTGATATGTATAATTGGATTGTGGGTAAGGTATATATGCAGAACTGTTGCATAATACACTACTCCGAGAAACGATGTCACACGAACGAATCAACATCTTTCTTTTCTTTTTTTTTTTTTCCTCCTTTTCTTTTCGGGTCCGTTTTTCTGGGAAAGA

Coding sequence (CDS)

ATGGATCCTGGCAAGCTTTTCATTGGTGGTATTTCATGGGACACAGATGAAGATCGTCTTCGAGAGTATTTTCAGAGCTTTGGAGAAGTTGTGGAGGTGATGATCATGAGGGATCGGACCACCGGCCGTGCCCGTGGCTTTGGTTTCGTCGTCTTTGCTGACCCTGTTGTTGCAGCAAGAGTTGTATTGGAAAAACATGTAATTGATGGGAGAACTGTTGAAGCAAAGAAGGCTGTTCCTCGAGATGATCAAAACATTTTGAGCAGGAACAATACTGGTATCCTTGGGTCACCCGGTCCTACTCGCACAAAGAAGATATTTGTTGGAGGATTGGCATCAACTGTTACAGAGAGCGACTTCAAAAAGTATTTTGATCAGTTTGGAACAATCGTAGATGTCGTGGTGATGTATGACCATAATACTCAAAGACCAAGAGGTTTTGGATTTATCACTTATGAGTCAGAGGAATCAGTGGAGAAAGTGTTATACAAAACTTTTCATGAACTCAATGGTAAAATGGTTGAGGTTAAGAGGGCTGTTCCAAAGGAATCATCACCGGTGCCAAATCGAAATCAATTAGGTGGTTACCCTTACAATTTTGGTAGAGTCGGTAGCTATTTAAATGGCTATAATCAAGGATATAATCCAACCTCAGTTGGGGGATATGGATTGAGATCTGATGGTAGATTTAGTCCTGTTACAGTCGGTCGGGGTGGACTTTCGCCAATTAGTCCTGGTTATGGAATAGGGCTAAATCTTGATACAGGGTTGAACCCGAACTATGGGACAGGTCCCAATGTTGGCTCTAACCTCAGCTATGGACGGGTAATGAGCCCCTCATATGGTGGAAATTTAAATAGGTACGGTAGCCCAAACCCCATGGTATATGGTGGTGGCAGTGGAGGTAATGGTTCTATTTTAAGCTCATCGGTTCAGAATCTGTGGGGAAATGTCGGTAACTCTGCTGGTACAAACCCCTCACACTTGAGGACTTTTCCTGGCTCTGGTGGTGTGCATACAGGAACTAATTCGTTGAACAGTATTGGAGGGCTTTGGGGTGCTTCTGCAAGTCTAGGTCATGGGGAAAATGCTGGTTCTCCATTCAATACTGCTAATCTCGACTTTGGAAGTGGAGATGCCAGCTTTACATCAGGAACAACTGTAGGTTATGCTAGAAGCATTGGAACTAATGTTTCCTCAGCATCTTTGTACTCTGCACCAAATATTTATGATGAGGTTCATGGGAATAATGATGAAGGGAACACATTTTATGGGCATTCCAGTTGGCAGTCGTTGCCAACAGAGCTTGAGGATTCTTCCTCAATTGGTTTTGGCCTTGGCAATGCAGCTTCAGATGTTATTAGTAGAAACAATGCTGGTTATACTGTTGGATATGGTGTTTCTAATAGACAATCTAATAGAGGAATTGCTGCTTAG

Protein sequence

MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAARVVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQLGGYPYNFGRVGSYLNGYNQGYNPTSVGGYGLRSDGRFSPVTVGRGGLSPISPGYGIGLNLDTGLNPNYGTGPNVGSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGSGGNGSILSSSVQNLWGNVGNSAGTNPSHLRTFPGSGGVHTGTNSLNSIGGLWGASASLGHGENAGSPFNTANLDFGSGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEGNTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGIAA

Homology

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BLAST of Bhi08G000631 vs. Swiss-Prot
Match: sp|Q8W034|RNP1_ARATH (Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP1 PE=1 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 4.9e-58
Identity = 102/189 (53.97%), Postives = 146/189 (77.25%), Query Frame = 0


Query: 2   DPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAARV 61
           D GKLF+GGISW+TDED+LRE+F ++GEV + ++MRD+ TGR RGFGFV+F+DP V  RV
Sbjct: 4   DQGKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRV 63

Query: 62  VLEKHVIDGRTVEAKKAVPRDDQNILSR----NNTGILGSPGPTRTKKIFVGGLASTVTE 121
           + EKH ID R V+ K+A+ R++Q +  R    N +   G     +TKKIFVGGL  T+T+
Sbjct: 64  LQEKHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGGLPPTLTD 123

Query: 122 SDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVK 181
            +F++YF+ +G + DV +MYD  T RPRGFGF++++SE++V+ VL+KTFH+L+GK VEVK
Sbjct: 124 EEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHKTFHDLSGKQVEVK 183

Query: 182 RAVPKESSP 187
           RA+PK+++P
Sbjct: 184 RALPKDANP 192

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BLAST of Bhi08G000631 vs. Swiss-Prot
Match: sp|Q96DH6|MSI2H_HUMAN (RNA-binding protein Musashi homolog 2 OS=Homo sapiens OX=9606 GN=MSI2 PE=1 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 3.9e-47
Identity = 104/224 (46.43%), Postives = 137/224 (61.16%), Query Frame = 0


Query: 2   DPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAARV 61
           DPGK+FIGG+SW T  D LR+YF  FGE+ E M+MRD TT R+RGFGFV FADP    +V
Sbjct: 19  DPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKV 78

Query: 62  VLE-KHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 121
           + +  H +D +T++ K A PR  Q  +             TRTKKIFVGGL++     D 
Sbjct: 79  LGQPHHELDSKTIDPKVAFPRRAQPKM------------VTRTKKIFVGGLSANTVVEDV 138

Query: 122 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 181
           K+YF+QFG + D ++M+D  T R RGFGF+T+E+E+ VEKV    FHE+N KMVE K+A 
Sbjct: 139 KQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQ 198

Query: 182 PKE-SSPVPNRNQLGGYPYNFGRVGSYLNGYNQGYNPTSVGGYG 224
           PKE   P   R +  G PY    + +++ G      P  V  YG
Sbjct: 199 PKEVMFPPGTRGRARGLPYT---MDAFMLGMGMLGYPNFVATYG 227

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BLAST of Bhi08G000631 vs. Swiss-Prot
Match: sp|Q920Q6|MSI2H_MOUSE (RNA-binding protein Musashi homolog 2 OS=Mus musculus OX=10090 GN=Msi2 PE=1 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 3.9e-47
Identity = 104/224 (46.43%), Postives = 137/224 (61.16%), Query Frame = 0


Query: 2   DPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAARV 61
           DPGK+FIGG+SW T  D LR+YF  FGE+ E M+MRD TT R+RGFGFV FADP    +V
Sbjct: 19  DPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKV 78

Query: 62  VLE-KHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 121
           + +  H +D +T++ K A PR  Q  +             TRTKKIFVGGL++     D 
Sbjct: 79  LGQPHHELDSKTIDPKVAFPRRAQPKM------------VTRTKKIFVGGLSANTVVEDV 138

Query: 122 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 181
           K+YF+QFG + D ++M+D  T R RGFGF+T+E+E+ VEKV    FHE+N KMVE K+A 
Sbjct: 139 KQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQ 198

Query: 182 PKE-SSPVPNRNQLGGYPYNFGRVGSYLNGYNQGYNPTSVGGYG 224
           PKE   P   R +  G PY    + +++ G      P  V  YG
Sbjct: 199 PKEVMFPPGTRGRARGLPYT---MDAFMLGMGMLGYPNFVATYG 227

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BLAST of Bhi08G000631 vs. Swiss-Prot
Match: sp|O94432|YHKF_SCHPO (Uncharacterized RNA-binding protein C660.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC660.15 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 3.1e-44
Identity = 84/198 (42.42%), Postives = 129/198 (65.15%), Query Frame = 0


Query: 2   DPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAARV 61
           + GK+FIGG++W+T +D LR+YF+ FGEV++  +MRD TTGR+RGFGF+ F +P     V
Sbjct: 161 EDGKMFIGGLNWETTDDSLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKNPKCVNEV 220

Query: 62  VLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDFK 121
           + ++H +DG+ ++ K+A+PR++Q                 +T K+FVGG+    TE +F+
Sbjct: 221 MSKEHHLDGKIIDPKRAIPREEQE----------------KTAKMFVGGVPGDCTEEEFR 280

Query: 122 KYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAVP 181
            +F+QFG ++D  +M D +T RPRGFGF+TYE+E +VE  + + +  ++GK VEVKRA P
Sbjct: 281 NFFNQFGRVLDATLMMDKDTGRPRGFGFVTYENESAVEATMSQPYITIHGKPVEVKRATP 340

Query: 182 KESSPVPNRNQLGGYPYN 200
           K S    +     GY  N
Sbjct: 341 KASLRDSHDRHQHGYHGN 342

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BLAST of Bhi08G000631 vs. Swiss-Prot
Match: sp|Q9VVE5|MSIR6_DROME (RNA-binding protein Musashi homolog Rbp6 OS=Drosophila melanogaster OX=7227 GN=Rbp6 PE=2 SV=3)

HSP 1 Score: 180.3 bits (456), Expect = 5.2e-44
Identity = 91/183 (49.73%), Postives = 124/183 (67.76%), Query Frame = 0


Query: 2   DPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAARV 61
           DPGK+FIGG+SW T  + LR+YF  +G++ E M+M+D TT R+RGFGFV F+DP    +V
Sbjct: 27  DPGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKV 86

Query: 62  VLE-KHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 121
           + +  H +DG+ V+ K A PR       R +  ++     TRTKKIFVGGL++  T  D 
Sbjct: 87  LTQGTHELDGKKVDPKVAFPR-------RAHPKMV-----TRTKKIFVGGLSAPTTLEDV 146

Query: 122 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 181
           K YF+QFG I D ++M+D  T R RGFGF+T++SE+ V+KV    FHE+N KMVE K+A 
Sbjct: 147 KSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQ 197

Query: 182 PKE 184
           PKE
Sbjct: 207 PKE 197

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BLAST of Bhi08G000631 vs. TAIR10
Match: AT3G07810.2 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 372.5 bits (955), Expect = 4.0e-103
Identity = 264/495 (53.33%), Postives = 310/495 (62.63%), Query Frame = 0


Query: 2   DPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAARV 61
           D GKLFIGGISWDT+E+RL+EYF SFGEV+E +I++DRTTGRARGFGFVVFADP VA  V
Sbjct: 4   DNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEIV 63

Query: 62  VLEKHVIDGRTVEAKKAVPRDDQNILSR-NNTGILGSP-GPTRTKKIFVGGLASTVTESD 121
           + EKH IDGR VEAKKAVPRDDQN+++R N++ I GSP GP RT+KIFVGGL S+VTESD
Sbjct: 64  ITEKHNIDGRLVEAKKAVPRDDQNMVNRSNSSSIQGSPGGPGRTRKIFVGGLPSSVTESD 123

Query: 122 FKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRA 181
           FK YF+QFGT  DVVVMYDHNTQRPRGFGFITY+SEE+VEKVL KTFHELNGKMVEVKRA
Sbjct: 124 FKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMVEVKRA 183

Query: 182 VPKESSPVPNRNQLG-GYPYNFGRVGSYLNGYNQGYNPTSVGGYGLRSDGRFSPVTVGRG 241
           VPKE SP P+R+ LG GY Y   RV + LNGY QG+NP +VGGYGLR DGRFSPV  GR 
Sbjct: 184 VPKELSPGPSRSPLGAGYSYGVNRVNNLLNGYAQGFNPAAVGGYGLRMDGRFSPVGAGRS 243

Query: 242 GLSPISPGYGIGLNLDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRYGSPNPMVYGG 301
           G +  S GYG+ +N D           XXXXXXXXXXXXXXXXXXXXXR+G   P V   
Sbjct: 244 GFANYSSGYGMNVNFDQGLPTGFTGGTXXXXXXXXXXXXXXXXXXXXXRFG---PAVGYE 303

Query: 302 GSGGNGSILSSSVQNLWGNVGNSAGTNPSHLRTFPGSGGVHTGTNSLNSIGGLWGAS--- 361
           G                                                + G +G S   
Sbjct: 304 GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSGPFGNSGVN 363

Query: 362 -ASLGHGENAGSPFNTANLDFGSGDASFTSGTTVGYARSIGTN----VSSASLYSAPNI- 421
             + G G NA S  N      G+G++ F  GT    AR+ G N     SS S  SA N  
Sbjct: 364 WGAPGGGNNAVSNENVKFGYGGNGESGFGLGTGGYAARNPGANKAAPSSSFSSASATNNT 423

Query: 422 -YD-----EVHGNNDEGNTFYGHSSWQSLPTELEDSSSIGFGLGNA--ASDVISRNNA-G 476
            YD     E +GN       Y   +W+S   E E  +   +G+G    +SDV +R+++ G
Sbjct: 424 GYDTAGLAEFYGN----GAVYSDPTWRSPTPETEGPAPFSYGIGGGVPSSDVSARSSSPG 483

[Close]

BLAST of Bhi08G000631 vs. TAIR10
Match: AT5G47620.4 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 358.6 bits (919), Expect = 5.9e-99
Identity = 233/505 (46.14%), Postives = 288/505 (57.03%), Query Frame = 0


Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           M+  KLFIGGISW+T EDRLR+YF SFGEV+E +IM+DR TGRARGFGFVVFADP VA R
Sbjct: 3   MESCKLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAER 62

Query: 61  VVLEKHVIDGR----------------------TVEAKKAVPRDDQNILSRNNTGILGSP 120
           VVL KH+IDG+                       VEAKKAVPRDD  + +++N+ + GSP
Sbjct: 63  VVLLKHIIDGKILVDSIVYNQLCRSDKCISLSEVVEAKKAVPRDDHVVFNKSNSSLQGSP 122

Query: 121 GPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESV 180
           GP+ +KKIFVGGLAS+VTE++FKKYF QFG I DVVVMYDH TQRPRGFGFI+Y+SEE+V
Sbjct: 123 GPSNSKKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAV 182

Query: 181 EKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQLGGYPYNFGRVGSYLNGYNQGYNPTS 240
           +KVL KTFHELNGKMVEVK AVPK+ +    RNQ+    +   R+ S LN Y QG++P+ 
Sbjct: 183 DKVLQKTFHELNGKMVEVKLAVPKDMALNTMRNQMNVNSFGTSRISSLLNEYTQGFSPSP 242

Query: 241 VGGYGLRSDGRFSPVTVGRGGLSPISPGYGIGLNLDTXXXXXXXXXXXXXXXXXXXXXXX 300
           + GYG++ + R+SP    RGG SP   GYGI LN +                        
Sbjct: 243 ISGYGVKPEVRYSPAVGNRGGFSPFGHGYGIELNFE----PNQTQNYGSGSSGGFGRPFS 302

Query: 301 XXXXXXXXRYGSPNPMVYGGGSGGNGSILSSSVQN-LWGNVGNSAGTN-PSHLRTFPGSG 360
                   R+GS   M  GG S GNGS+L+++ +N LWGN G    +N P    +F G+ 
Sbjct: 303 PGYAASLGRFGS--QMESGGASVGNGSVLNAAPKNHLWGNGGLGYMSNSPISRSSFSGNS 362

Query: 361 GVHTGTNSLNSIGGLWGASA---SLGHGENAGSPFNTANLDFGSGDASFTSGTTVGYARS 420
           G+    +SL SIG  WG  A   S  HGE  G                      VG    
Sbjct: 363 GM----SSLGSIGDNWGTVARARSSYHGERGG----------------------VGLEAM 422

Query: 421 IGTNVSSASLYSAPNIYDEVHGNNDEGNTFYGHSSWQSLPTELEDSSSIGFGLGNAASDV 479
            G +V   S  S  +I         E ++ Y  S W SLP + E+      GLG    D 
Sbjct: 423 RGVHVGGYS--SGSSIL--------EADSLYSDSMWLSLPAKAEE------GLGMGPLDF 453

[Close]

BLAST of Bhi08G000631 vs. TAIR10
Match: AT4G26650.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 334.0 bits (855), Expect = 1.6e-91
Identity = 228/500 (45.60%), Postives = 284/500 (56.80%), Query Frame = 0


Query: 2   DPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAARV 61
           D GKLFIGGISWDTDE+RL+EYF  +G++VE +IMRDRTTGRARGFGF+VFADP VA RV
Sbjct: 13  DLGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAERV 72

Query: 62  VLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGIL-------GSPGPTRTKKIFVGGLAST 121
           +++KH+IDGRTVEAKKAVPRDDQ +L R+ + +        G+ G  RTKKIFVGGL S+
Sbjct: 73  IMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPMHLISPSHGGNGGGARTKKIFVGGLPSS 132

Query: 122 VTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMV 181
           +TE++FK YFDQFGTI DVVVMYDHNTQRPRGFGFIT++SEESV+ VL+KTFHELNGKMV
Sbjct: 133 ITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHKTFHELNGKMV 192

Query: 182 EVKRAVPKE-SSPVPNRNQLGGYPYNFGRV-GSYLNGYNQGYNPTSVGGYGLRSDGRFSP 241
           EVKRAVPKE SS  PNR+ L GY  N+G V                       S GRFSP
Sbjct: 193 EVKRAVPKELSSTTPNRSPLIGYGNNYGVVXXXXXXXXXXXXXXXXXXXXXXXSAGRFSP 252

Query: 242 VTVGRGGLSPISPGYGIGLNLDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRYGSPN 301
           +  GR   S    G    LNL++                                + S +
Sbjct: 253 IGSGRNAFSSFGLGLNQELNLNSNFDGNTLGYSRIPGNQY---------------FNSAS 312

Query: 302 PMVYGGGSGGN--GSILSSSVQNLWGNVGNSAGTNPSHLRTFPG-SGGVHTGTNSLNSIG 361
           P  Y    G N   S  + S ++LWGN  +S+G         PG + GV  G N      
Sbjct: 313 PNRYNSPIGYNRGDSAYNPSNRDLWGNRSDSSG---------PGWNLGVSVGNNR----- 372

Query: 362 GLWGASASL----GHGENAGSPFNTANLDFGSGDASFTSGTTVGYARSIGTNVSSASLYS 421
           G WG S+ +    G+G + G+    + L F        +G T G+  SIG       LY 
Sbjct: 373 GNWGLSSVVSDNNGYGRSYGAGSGLSGLSF--------AGNTNGFDGSIG------ELY- 432

Query: 422 APNIYDEVHGNNDEGNTFYGHSSW-QSLP-----TELED-SSSIGFGLGNAASDVISRNN 479
                         G++ Y  S+W QS+P      EL+  S S GFG+ N  SD  +  +
Sbjct: 433 -------------RGSSVYSDSTWQQSMPHHQSSNELDGLSRSYGFGIDNVGSDPSANAS 455

[Close]

BLAST of Bhi08G000631 vs. TAIR10
Match: AT5G55550.3 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 313.5 bits (802), Expect = 2.2e-85
Identity = 224/496 (45.16%), Postives = 285/496 (57.46%), Query Frame = 0


Query: 2   DPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAARV 61
           D GKLFIGGISWDTDE+RLR+YF ++G+VVE +IMRDR TGRARGFGF+VFADP V+ RV
Sbjct: 4   DLGKLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERV 63

Query: 62  VLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGI-LGSP---GPTRTKKIFVGGLASTVTE 121
           +++KH+IDGRTVEAKKAVPRDDQ +L R+ + I L SP   G  RTKKIFVGGL S++TE
Sbjct: 64  IMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPIHLMSPVHGGGGRTKKIFVGGLPSSITE 123

Query: 122 SDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVK 181
            +FK YFDQFGTI DVVVMYDHNTQRPRGFGFIT++S+++V++VL+KTFHELNGK+VEVK
Sbjct: 124 EEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLHKTFHELNGKLVEVK 183

Query: 182 RAVPKESSPVPN-RNQL-GGYPYNFGR----VGSYLNGYNQG---YNPTSVGGYGLRSDG 241
           RAVPKE SPV N R+ L  G  Y  G       SY N +  G   YN  S+G  G     
Sbjct: 184 RAVPKEISPVSNIRSPLASGVNYGGGSNRMPANSYFNNFAPGPGFYN--SLGPVG----R 243

Query: 242 RFSPVT-VGRGGLSPISPGYGIGLNLDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR 301
           RFSPV   GR  +S     +G+GLN D                                 
Sbjct: 244 RFSPVIGSGRNAVS----AFGLGLNHDLSLNLNPSCDGTSSTFGYNRIPSNPYFNG---- 303

Query: 302 YGSPNPMVYGGGSGGNGSILSSSVQNLWGNVGNSAGTNPSHLRTFPGSGGVHTGTNSLNS 361
             SPN      G     S  +S+ ++LWGN  ++AG         PG             
Sbjct: 304 -ASPNRYTSPIGHNRTESPYNSNNRDLWGNRTDTAG---------PG------------- 363

Query: 362 IGGLWGASASLGHGENAGSPFNTANLDFGSGDASFTSGTTVGYARSIGTNVSSASLYSAP 421
               W  + S  +G N G        ++G   +S  S    G+ R+ GT   S+ L S+P
Sbjct: 364 ----WNLNVS--NGNNRG--------NWGLPSSSAVSNDNNGFGRNYGT---SSGLSSSP 423

Query: 422 -NIYDEVHGNNDEGNTFYGHSSW--QSLPT----ELED-SSSIGFGLGNAASDVISRNNA 476
            N ++   G    G + Y  S+W  Q LP+    EL++ S + G+ + N  SD  + +  
Sbjct: 424 FNGFEGSIGELYRGGSVYSDSTWQQQQLPSQSSHELDNLSRAYGYDIDNVGSDPSANDPE 445

[Close]

BLAST of Bhi08G000631 vs. TAIR10
Match: AT4G14300.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 226.9 bits (577), Expect = 2.7e-59
Identity = 102/189 (53.97%), Postives = 146/189 (77.25%), Query Frame = 0


Query: 2   DPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAARV 61
           D GKLF+GGISW+TDED+LRE+F ++GEV + ++MRD+ TGR RGFGFV+F+DP V  RV
Sbjct: 4   DQGKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRV 63

Query: 62  VLEKHVIDGRTVEAKKAVPRDDQNILSR----NNTGILGSPGPTRTKKIFVGGLASTVTE 121
           + EKH ID R V+ K+A+ R++Q +  R    N +   G     +TKKIFVGGL  T+T+
Sbjct: 64  LQEKHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGGLPPTLTD 123

Query: 122 SDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVK 181
            +F++YF+ +G + DV +MYD  T RPRGFGF++++SE++V+ VL+KTFH+L+GK VEVK
Sbjct: 124 EEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHKTFHDLSGKQVEVK 183

Query: 182 RAVPKESSP 187
           RA+PK+++P
Sbjct: 184 RALPKDANP 192

[Close]

BLAST of Bhi08G000631 vs. TrEMBL
Match: tr|A0A0A0LTE8|A0A0A0LTE8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G181500 PE=4 SV=1)

HSP 1 Score: 837.4 bits (2162), Expect = 1.6e-239
Identity = 459/478 (96.03%), Postives = 468/478 (97.91%), Query Frame = 0


Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           MDPGKLFIGGISWDTDEDRLREYF++FGEVVEVMIMRDR TGRARGFGFVVFADPV AAR
Sbjct: 1   MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAAR 60

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF
Sbjct: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120

Query: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV
Sbjct: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180

Query: 181 PKESSPVPNRNQLGGYPYNFGRVGSYLNGYNQGYNPTSVGGYGLRSDGRFSPVTVGRGGL 240
           PKESSPVPNRNQL GYP+NFGRVGSYLNGYNQGYNPT+VGGYGLRSDGRFSPVTVGRGGL
Sbjct: 181 PKESSPVPNRNQLAGYPFNFGRVGSYLNGYNQGYNPTAVGGYGLRSDGRFSPVTVGRGGL 240

Query: 241 SPISPGYGIGLNLDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRYGSPNPMVYGGGS 300
           SPISPGYG+GLNL+TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRYGSPNPMVY GG 
Sbjct: 241 SPISPGYGMGLNLETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRYGSPNPMVYSGG- 300

Query: 301 GGNGSILSSSVQNLWGNVGNSAGTNPSHLRTFPGSGGVHTGTNSLNSIGGLWGASASLGH 360
           GGNGSILSSSVQNLWGNV  SAGTN SHLRTFPGSGGVHTGT+SLN+IGGLWGASASLGH
Sbjct: 301 GGNGSILSSSVQNLWGNVSTSAGTNSSHLRTFPGSGGVHTGTSSLNNIGGLWGASASLGH 360

Query: 361 GENAGSPFNTANLDFGSGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG 420
           GENAGS FNT NLDFG+GDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG
Sbjct: 361 GENAGSSFNTVNLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG 420

Query: 421 NTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGIAA 479
           NTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGIAA
Sbjct: 421 NTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGIAA 477

[Close]

BLAST of Bhi08G000631 vs. TrEMBL
Match: tr|A0A1S3CK54|A0A1S3CK54_CUCME (heterogeneous nuclear ribonucleoprotein 1 OS=Cucumis melo OX=3656 GN=LOC103501720 PE=4 SV=1)

HSP 1 Score: 830.5 bits (2144), Expect = 1.9e-237
Identity = 452/478 (94.56%), Postives = 458/478 (95.82%), Query Frame = 0


Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           MDPGKLFIGGISWDTDEDRLREYF++FGEVVEVMIMRDRTTGRARGFGFVVFADPV AAR
Sbjct: 1   MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRTTGRARGFGFVVFADPVAAAR 60

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF
Sbjct: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120

Query: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV
Sbjct: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180

Query: 181 PKESSPVPNRNQLGGYPYNFGRVGSYLNGYNQGYNPTSVGGYGLRSDGRFSPVTVGRGGL 240
           PKESSPVPNRNQL GYPYNFGRVGSYLNGYNQGYNPTSVGGYGLRSDGRFSPVTVGRGGL
Sbjct: 181 PKESSPVPNRNQLAGYPYNFGRVGSYLNGYNQGYNPTSVGGYGLRSDGRFSPVTVGRGGL 240

Query: 241 SPISPGYGIGLNLDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRYGSPNPMVYGGGS 300
           SPISPGYG+G+NLD  XXXXXXXXXXXXXXXXXXXXXXXXXX    RYGSPNPMVYG   
Sbjct: 241 SPISPGYGMGINLD--XXXXXXXXXXXXXXXXXXXXXXXXXXGNLNRYGSPNPMVYGXXX 300

Query: 301 GGNGSILSSSVQNLWGNVGNSAGTNPSHLRTFPGSGGVHTGTNSLNSIGGLWGASASLGH 360
                ILSSSVQNLWGNV NSAGTN SHLRTFPGSGGVHTGTNSLN+IGGLWG SASLGH
Sbjct: 301 XXXXXILSSSVQNLWGNVSNSAGTNSSHLRTFPGSGGVHTGTNSLNNIGGLWGTSASLGH 360

Query: 361 GENAGSPFNTANLDFGSGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG 420
           GEN GSPFNTANLDFG+GDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG
Sbjct: 361 GENGGSPFNTANLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG 420

Query: 421 NTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGIAA 479
           NTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGIAA
Sbjct: 421 NTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGIAA 476

[Close]

BLAST of Bhi08G000631 vs. TrEMBL
Match: tr|A0A061GHM1|A0A061GHM1_THECC (RNA-binding family protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_030384 PE=4 SV=1)

HSP 1 Score: 540.4 bits (1391), Expect = 4.0e-150
Identity = 315/479 (65.76%), Postives = 367/479 (76.62%), Query Frame = 0


Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           M+ GKLFIGGISWDT+EDRLREYFQ+FG+VVE +IMRDR TGRARGFGFVVFADP +A R
Sbjct: 3   MELGKLFIGGISWDTNEDRLREYFQAFGDVVEAVIMRDRATGRARGFGFVVFADPAIAER 62

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VV+EKH+IDGRTVEAKKAVPRDDQNIL+++N  I GSPGP RTKKIFVGGLASTVTESDF
Sbjct: 63  VVMEKHMIDGRTVEAKKAVPRDDQNILNKSNVSIHGSPGPARTKKIFVGGLASTVTESDF 122

Query: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           K+YFDQFGTI DVVVMYDHNTQRPRGFGFITY+SEE+V+KVL +TFHELNGKMVEVKRAV
Sbjct: 123 KRYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLQRTFHELNGKMVEVKRAV 182

Query: 181 PKESSPVPNRNQLGGYPYNFGRVGSYLNGYNQGYNPTSVGGYGLRSDGRFSPVTVGRGGL 240
           PKESSP P+RNQLGGY +   RV S+LNGY QGYN +SVGGYG R +GRFSPVT GR G 
Sbjct: 183 PKESSPGPSRNQLGGYNFGLSRVNSFLNGYMQGYNTSSVGGYGFRMEGRFSPVTAGRSGF 242

Query: 241 SPISPGYGIGLNLDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRYGSPNPMVYGGGS 300
            P+SPGYG+GLN ++XXXXXXXXXXXXXXXXXXXXXXXXX      R+GS  P  YGGGS
Sbjct: 243 PPLSPGYGMGLNFESXXXXXXXXXXXXXXXXXXXXXXXXXFNGNSNRFGS--PFGYGGGS 302

Query: 301 GGNGSILSSSVQNLWGNVGNSAGTNPSHLRTFPGSGGVHTGTNSLNSIGGLWGASASLGH 360
           GGN SIL+S+ +N+WGN   +  TN +      GSG  ++G +S  SIG LW +S SLG 
Sbjct: 303 GGNSSILNSAGRNMWGNGSFNYATNSTTSSAIVGSGSGNSGVSSFGSIGALWDSSPSLGQ 362

Query: 361 GENAGSPFNTANLDFGSGDASFTSGTTVGYARSIGTNVSSASLYSAPN-IYDEVHGNNDE 420
           G  A S +N                       S   NV+  S + A N  YD  + N  E
Sbjct: 363 GGGAASAYNXXXXXXXXXXXXXXXXXXXXXXNS---NVAQLSTHGASNGGYDGAYANIYE 422

Query: 421 GNTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGIAA 479
             +FYG S+W+S P++LE SSS GFGLG+A+SDV++ N+A Y  GY V+NRQ+NRGIAA
Sbjct: 423 NGSFYGDSTWRSSPSDLERSSSFGFGLGDASSDVMTNNSADYIGGYSVTNRQANRGIAA 476

[Close]

BLAST of Bhi08G000631 vs. TrEMBL
Match: tr|A0A2N9IXN4|A0A2N9IXN4_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS58019 PE=4 SV=1)

HSP 1 Score: 538.1 bits (1385), Expect = 2.0e-149
Identity = 320/479 (66.81%), Postives = 360/479 (75.16%), Query Frame = 0


Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           M+PGKLFIGGISWDT+EDRLREYFQ FGEVVE +IM+DR TGRARGFGFVVFADP  A R
Sbjct: 10  MEPGKLFIGGISWDTNEDRLREYFQCFGEVVEAVIMKDRATGRARGFGFVVFADPTAAER 69

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VV+EKHVIDGRTVEAKKAVPRDDQNIL+RNN+ I GSPGP RTKKIFVGGLASTVTESDF
Sbjct: 70  VVMEKHVIDGRTVEAKKAVPRDDQNILNRNNSSIHGSPGPARTKKIFVGGLASTVTESDF 129

Query: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           KKYFDQFGTI DVVVMYDHNTQRPRGFGFITY+SEESVE VLYKTFHELNGK+VEVKRAV
Sbjct: 130 KKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEESVENVLYKTFHELNGKLVEVKRAV 189

Query: 181 PKESSPVPNRNQLGGYPYNFGRVGSYLNGYNQGYNPTSVGGYGLRSD-GRFSPVTVGRGG 240
           PKE SP P+R QLGGY Y   RV S LNGYNQGYNP+SVGGYGLR D GRFSPVTVGR G
Sbjct: 190 PKELSPGPSRGQLGGYNYGLSRV-SLLNGYNQGYNPSSVGGYGLRLDGGRFSPVTVGRSG 249

Query: 241 LSPISPGYGIGLNLDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRYGSPNPMVYGGG 300
             P SPGYG G N++ XXXXXXXXXXXXX        XXXXXXXX  R  + NP+ YG G
Sbjct: 250 FPPFSPGYGTGPNIEXXXXXXXXXXXXXXSNLGFGRAXXXXXXXXSNR--NVNPIGYGVG 309

Query: 301 SGGNGSILSSSVQNLWGNVGNSAGTNPSHLRTFPGSGGVHTGTNSLNSIGGLWGASASLG 360
           +GGN SILSSS +NLWGN   +  TN ++     GSG  +       +IG LW +     
Sbjct: 310 NGGNSSILSSSSRNLWGNGSLNYATNATNPNALLGSGSGNXXXXXFGNIGALWSSXXXXX 369

Query: 361 HGENAGSPFNTANLDFGSGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDE 420
            G  AGS +  +                    R+ GT+V+ AS Y+A N Y+  + +  E
Sbjct: 370 KGGGAGSTYG-SGXXXXXXXXXXXXXXXXXXXRNSGTSVAPASSYAASNGYNGGYEDIYE 429

Query: 421 GNTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGIAA 479
           G +FYG  +W+SLP+ELE S S G+GLGNAASDV+SRN+ GY  GY V+NRQSNRGIAA
Sbjct: 430 G-SFYGEPTWRSLPSELEGSGSFGYGLGNAASDVLSRNSGGYVGGYTVTNRQSNRGIAA 483

[Close]

BLAST of Bhi08G000631 vs. TrEMBL
Match: tr|A0A061GIB9|A0A061GIB9_THECC (RNA-binding family protein isoform 5 OS=Theobroma cacao OX=3641 GN=TCM_030384 PE=4 SV=1)

HSP 1 Score: 536.6 bits (1381), Expect = 5.8e-149
Identity = 312/478 (65.27%), Postives = 365/478 (76.36%), Query Frame = 0


Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           M+ GKLFIGGISWDT+EDRLREYFQ+FG+VVE +IMRDR TGRARGFGFVVFADP +A R
Sbjct: 3   MELGKLFIGGISWDTNEDRLREYFQAFGDVVEAVIMRDRATGRARGFGFVVFADPAIAER 62

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VV+EKH+IDGRTVEAKKAVPRDDQNIL+++N  I GSPGP RTKKIFVGGLASTVTESDF
Sbjct: 63  VVMEKHMIDGRTVEAKKAVPRDDQNILNKSNVSIHGSPGPARTKKIFVGGLASTVTESDF 122

Query: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           K+YFDQFGTI DVVVMYDHNTQRPRGFGFITY+SEE+V+KVL +TFHELNGKMVEVKRAV
Sbjct: 123 KRYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLQRTFHELNGKMVEVKRAV 182

Query: 181 PKESSPVPNRNQLGGYPYNFGRVGSYLNGYNQGYNPTSVGGYGLRSDGRFSPVTVGRGGL 240
           PKESSP P+RNQLGGY +   RV S+LNGY QGYN +SVGGYG R +GRFSPVT GR G 
Sbjct: 183 PKESSPGPSRNQLGGYNFGLSRVNSFLNGYMQGYNTSSVGGYGFRMEGRFSPVTAGRSGF 242

Query: 241 SPISPGYGIGLNLDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRYGSPNPMVYGGGS 300
            P+SPGYG+GLN ++XXXXXXXXXXXXXXXXXXXXXXXXX      R+GS  P  YGGGS
Sbjct: 243 PPLSPGYGMGLNFESXXXXXXXXXXXXXXXXXXXXXXXXXFNGNSNRFGS--PFGYGGGS 302

Query: 301 GGNGSILSSSVQNLWGNVGNSAGTNPSHLRTFPGSGGVHTGTNSLNSIGGLWGASASLGH 360
           GGN SIL+S+ +N+WGN   +  TN +      GSG  ++G +S  SIG LW +S SLG 
Sbjct: 303 GGNSSILNSAGRNMWGNGSFNYATNSTTSSAIVGSGSGNSGVSSFGSIGALWDSSPSLGQ 362

Query: 361 GENAGSPFNTANLDFGSGDASFTSGTTVGYARSIGTNVSSASLYSAPN-IYDEVHGNNDE 420
           G  A S +N                       S   NV+  S + A N  YD  + N  E
Sbjct: 363 GGGAASAYNXXXXXXXXXXXXXXXXXXXXXXNS---NVAQLSTHGASNGGYDGAYANIYE 422

Query: 421 GNTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGIA 478
             +FYG S+W+S P++LE SSS GFGLG+A+SDV++ N+A Y  GY V+NRQ+NRG +
Sbjct: 423 NGSFYGDSTWRSSPSDLERSSSFGFGLGDASSDVMTNNSADYIGGYSVTNRQANRGFS 475

[Close]

BLAST of Bhi08G000631 vs. NCBI nr
Match: XP_022142553.1 (heterogeneous nuclear ribonucleoprotein 1 [Momordica charantia] >XP_022142555.1 heterogeneous nuclear ribonucleoprotein 1 [Momordica charantia])

HSP 1 Score: 857.4 bits (2214), Expect = 2.2e-245
Identity = 465/478 (97.28%), Postives = 472/478 (98.74%), Query Frame = 0


Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPV+AAR
Sbjct: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVIAAR 60

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF
Sbjct: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120

Query: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           KKYFDQFGTI DVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV
Sbjct: 121 KKYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180

Query: 181 PKESSPVPNRNQLGGYPYNFGRVGSYLNGYNQGYNPTSVGGYGLRSDGRFSPVTVGRGGL 240
           PKESSPVPNRNQLGGYPY FGRVGSYLNGYNQGYNP SVGGYGLRSDGRFSP++VGRGGL
Sbjct: 181 PKESSPVPNRNQLGGYPYGFGRVGSYLNGYNQGYNPASVGGYGLRSDGRFSPISVGRGGL 240

Query: 241 SPISPGYGIGLNLDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRYGSPNPMVYGGGS 300
           SPISPGYGIGLNLDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RYGSPNPM+YGGGS
Sbjct: 241 SPISPGYGIGLNLDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRYGSPNPMLYGGGS 300

Query: 301 GGNGSILSSSVQNLWGNVGNSAGTNPSHLRTFPGSGGVHTGTNSLNSIGGLWGASASLGH 360
           GGNGSILSSSVQNLWGNVGNSAG N SHLRTFPGSGGVHTGTNSLNSIGGLWGASASLGH
Sbjct: 301 GGNGSILSSSVQNLWGNVGNSAGANSSHLRTFPGSGGVHTGTNSLNSIGGLWGASASLGH 360

Query: 361 GENAGSPFNTANLDFGSGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG 420
           GENAGSPFNTANLDFG+GDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG
Sbjct: 361 GENAGSPFNTANLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG 420

Query: 421 NTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGIAA 479
           N+FYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRN+AGYTVGYGVSNRQSNRGIAA
Sbjct: 421 NSFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNSAGYTVGYGVSNRQSNRGIAA 478

[Close]

BLAST of Bhi08G000631 vs. NCBI nr
Match: XP_004139532.1 (PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Cucumis sativus] >KGN65038.1 hypothetical protein Csa_1G181500 [Cucumis sativus])

HSP 1 Score: 837.4 bits (2162), Expect = 2.4e-239
Identity = 459/478 (96.03%), Postives = 468/478 (97.91%), Query Frame = 0


Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           MDPGKLFIGGISWDTDEDRLREYF++FGEVVEVMIMRDR TGRARGFGFVVFADPV AAR
Sbjct: 1   MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAAR 60

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF
Sbjct: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120

Query: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV
Sbjct: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180

Query: 181 PKESSPVPNRNQLGGYPYNFGRVGSYLNGYNQGYNPTSVGGYGLRSDGRFSPVTVGRGGL 240
           PKESSPVPNRNQL GYP+NFGRVGSYLNGYNQGYNPT+VGGYGLRSDGRFSPVTVGRGGL
Sbjct: 181 PKESSPVPNRNQLAGYPFNFGRVGSYLNGYNQGYNPTAVGGYGLRSDGRFSPVTVGRGGL 240

Query: 241 SPISPGYGIGLNLDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRYGSPNPMVYGGGS 300
           SPISPGYG+GLNL+TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRYGSPNPMVY GG 
Sbjct: 241 SPISPGYGMGLNLETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRYGSPNPMVYSGG- 300

Query: 301 GGNGSILSSSVQNLWGNVGNSAGTNPSHLRTFPGSGGVHTGTNSLNSIGGLWGASASLGH 360
           GGNGSILSSSVQNLWGNV  SAGTN SHLRTFPGSGGVHTGT+SLN+IGGLWGASASLGH
Sbjct: 301 GGNGSILSSSVQNLWGNVSTSAGTNSSHLRTFPGSGGVHTGTSSLNNIGGLWGASASLGH 360

Query: 361 GENAGSPFNTANLDFGSGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG 420
           GENAGS FNT NLDFG+GDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG
Sbjct: 361 GENAGSSFNTVNLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG 420

Query: 421 NTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGIAA 479
           NTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGIAA
Sbjct: 421 NTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGIAA 477

[Close]

BLAST of Bhi08G000631 vs. NCBI nr
Match: XP_022927354.1 (heterogeneous nuclear ribonucleoprotein 1-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 830.9 bits (2145), Expect = 2.3e-237
Identity = 453/478 (94.77%), Postives = 461/478 (96.44%), Query Frame = 0


Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR
Sbjct: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VVLEKHVIDGRTVEAKKAVPRDDQN+LSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF
Sbjct: 61  VVLEKHVIDGRTVEAKKAVPRDDQNVLSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120

Query: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           K YFDQFGTI DVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV
Sbjct: 121 KTYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180

Query: 181 PKESSPVPNRNQLGGYPYNFGRVGSYLNGYNQGYNPTSVGGYGLRSDGRFSPVTVGRGGL 240
           PKESSPVPNR+QLG YPY FGRVGSYLNGYNQGYNPTSVG YGLRSD RFSPVTVGRGGL
Sbjct: 181 PKESSPVPNRSQLGAYPYGFGRVGSYLNGYNQGYNPTSVGAYGLRSDDRFSPVTVGRGGL 240

Query: 241 SPISPGYGIGLNLDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRYGSPNPMVYGGGS 300
           SPISPGYGIGLNLDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRYGSPNPMVYGGG+
Sbjct: 241 SPISPGYGIGLNLDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRYGSPNPMVYGGGN 300

Query: 301 GGNGSILSSSVQNLWGNVGNSAGTNPSHLRTFPGSGGVHTGTNSLNSIGGLWGASASLGH 360
           GGNGSILSSSVQNLWGNVGNS GTN SHLRTFPGSGGVHTGTNSLN IGGLWGASASL H
Sbjct: 301 GGNGSILSSSVQNLWGNVGNSVGTNSSHLRTFPGSGGVHTGTNSLNGIGGLWGASASLVH 360

Query: 361 GENAGSPFNTANLDFGSGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG 420
           GE++GSPFN  NLDF SGD S TSGTTVGYARS+GTNVSSASLYSAPNIYDEVHGNNDEG
Sbjct: 361 GEHSGSPFNAVNLDFASGDGSLTSGTTVGYARSVGTNVSSASLYSAPNIYDEVHGNNDEG 420

Query: 421 NTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGIAA 479
           N+FYGHSSWQ LPTELEDSSS+GFGLGNAASDVISRNN GYTVGYGVSNRQSNRGIAA
Sbjct: 421 NSFYGHSSWQLLPTELEDSSSVGFGLGNAASDVISRNNGGYTVGYGVSNRQSNRGIAA 478

[Close]

BLAST of Bhi08G000631 vs. NCBI nr
Match: XP_022927353.1 (heterogeneous nuclear ribonucleoprotein 1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 830.9 bits (2145), Expect = 2.3e-237
Identity = 453/478 (94.77%), Postives = 461/478 (96.44%), Query Frame = 0


Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR
Sbjct: 33  MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 92

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VVLEKHVIDGRTVEAKKAVPRDDQN+LSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF
Sbjct: 93  VVLEKHVIDGRTVEAKKAVPRDDQNVLSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 152

Query: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           K YFDQFGTI DVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV
Sbjct: 153 KTYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 212

Query: 181 PKESSPVPNRNQLGGYPYNFGRVGSYLNGYNQGYNPTSVGGYGLRSDGRFSPVTVGRGGL 240
           PKESSPVPNR+QLG YPY FGRVGSYLNGYNQGYNPTSVG YGLRSD RFSPVTVGRGGL
Sbjct: 213 PKESSPVPNRSQLGAYPYGFGRVGSYLNGYNQGYNPTSVGAYGLRSDDRFSPVTVGRGGL 272

Query: 241 SPISPGYGIGLNLDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRYGSPNPMVYGGGS 300
           SPISPGYGIGLNLDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRYGSPNPMVYGGG+
Sbjct: 273 SPISPGYGIGLNLDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRYGSPNPMVYGGGN 332

Query: 301 GGNGSILSSSVQNLWGNVGNSAGTNPSHLRTFPGSGGVHTGTNSLNSIGGLWGASASLGH 360
           GGNGSILSSSVQNLWGNVGNS GTN SHLRTFPGSGGVHTGTNSLN IGGLWGASASL H
Sbjct: 333 GGNGSILSSSVQNLWGNVGNSVGTNSSHLRTFPGSGGVHTGTNSLNGIGGLWGASASLVH 392

Query: 361 GENAGSPFNTANLDFGSGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG 420
           GE++GSPFN  NLDF SGD S TSGTTVGYARS+GTNVSSASLYSAPNIYDEVHGNNDEG
Sbjct: 393 GEHSGSPFNAVNLDFASGDGSLTSGTTVGYARSVGTNVSSASLYSAPNIYDEVHGNNDEG 452

Query: 421 NTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGIAA 479
           N+FYGHSSWQ LPTELEDSSS+GFGLGNAASDVISRNN GYTVGYGVSNRQSNRGIAA
Sbjct: 453 NSFYGHSSWQLLPTELEDSSSVGFGLGNAASDVISRNNGGYTVGYGVSNRQSNRGIAA 510

[Close]

BLAST of Bhi08G000631 vs. NCBI nr
Match: XP_008463611.1 (PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Cucumis melo])

HSP 1 Score: 830.5 bits (2144), Expect = 2.9e-237
Identity = 452/478 (94.56%), Postives = 458/478 (95.82%), Query Frame = 0


Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           MDPGKLFIGGISWDTDEDRLREYF++FGEVVEVMIMRDRTTGRARGFGFVVFADPV AAR
Sbjct: 1   MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRTTGRARGFGFVVFADPVAAAR 60

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF
Sbjct: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120

Query: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV
Sbjct: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180

Query: 181 PKESSPVPNRNQLGGYPYNFGRVGSYLNGYNQGYNPTSVGGYGLRSDGRFSPVTVGRGGL 240
           PKESSPVPNRNQL GYPYNFGRVGSYLNGYNQGYNPTSVGGYGLRSDGRFSPVTVGRGGL
Sbjct: 181 PKESSPVPNRNQLAGYPYNFGRVGSYLNGYNQGYNPTSVGGYGLRSDGRFSPVTVGRGGL 240

Query: 241 SPISPGYGIGLNLDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRYGSPNPMVYGGGS 300
           SPISPGYG+G+NLD  XXXXXXXXXXXXXXXXXXXXXXXXXX    RYGSPNPMVYG   
Sbjct: 241 SPISPGYGMGINLD--XXXXXXXXXXXXXXXXXXXXXXXXXXGNLNRYGSPNPMVYGXXX 300

Query: 301 GGNGSILSSSVQNLWGNVGNSAGTNPSHLRTFPGSGGVHTGTNSLNSIGGLWGASASLGH 360
                ILSSSVQNLWGNV NSAGTN SHLRTFPGSGGVHTGTNSLN+IGGLWG SASLGH
Sbjct: 301 XXXXXILSSSVQNLWGNVSNSAGTNSSHLRTFPGSGGVHTGTNSLNNIGGLWGTSASLGH 360

Query: 361 GENAGSPFNTANLDFGSGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG 420
           GEN GSPFNTANLDFG+GDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG
Sbjct: 361 GENGGSPFNTANLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG 420

Query: 421 NTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGIAA 479
           NTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGIAA
Sbjct: 421 NTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGIAA 476

The following BLAST results are available for this feature:

BLAST of Bhi08G000631 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8W034\|RNP1_ARATH	4.9e-58	53.97	Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP...	[more]
sp\|Q96DH6\|MSI2H_HUMAN	3.9e-47	46.43	RNA-binding protein Musashi homolog 2 OS=Homo sapiens OX=9606 GN=MSI2 PE=1 SV=1	[more]
sp\|Q920Q6\|MSI2H_MOUSE	3.9e-47	46.43	RNA-binding protein Musashi homolog 2 OS=Mus musculus OX=10090 GN=Msi2 PE=1 SV=1	[more]
sp\|O94432\|YHKF_SCHPO	3.1e-44	42.42	Uncharacterized RNA-binding protein C660.15 OS=Schizosaccharomyces pombe (strain...	[more]
sp\|Q9VVE5\|MSIR6_DROME	5.2e-44	49.73	RNA-binding protein Musashi homolog Rbp6 OS=Drosophila melanogaster OX=7227 GN=R...	[more]

BLAST of Bhi08G000631 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G07810.2	4.0e-103	53.33	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G47620.4	5.9e-99	46.14	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G26650.1	1.6e-91	45.60	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G55550.3	2.2e-85	45.16	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G14300.1	2.7e-59	53.97	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

BLAST of Bhi08G000631 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LTE8\|A0A0A0LTE8_CUCSA	1.6e-239	96.03	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G181500 PE=4 SV=1	[more]
tr\|A0A1S3CK54\|A0A1S3CK54_CUCME	1.9e-237	94.56	heterogeneous nuclear ribonucleoprotein 1 OS=Cucumis melo OX=3656 GN=LOC10350172...	[more]
tr\|A0A061GHM1\|A0A061GHM1_THECC	4.0e-150	65.76	RNA-binding family protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_030384 PE...	[more]
tr\|A0A2N9IXN4\|A0A2N9IXN4_FAGSY	2.0e-149	66.81	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS58019 PE=4 SV=1	[more]
tr\|A0A061GIB9\|A0A061GIB9_THECC	5.8e-149	65.27	RNA-binding family protein isoform 5 OS=Theobroma cacao OX=3641 GN=TCM_030384 PE...	[more]

BLAST of Bhi08G000631 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142553.1	2.2e-245	97.28	heterogeneous nuclear ribonucleoprotein 1 [Momordica charantia] >XP_022142555.1 ...	[more]
XP_004139532.1	2.4e-239	96.03	PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Cucumis sativus] >KGN65038...	[more]
XP_022927354.1	2.3e-237	94.77	heterogeneous nuclear ribonucleoprotein 1-like isoform X2 [Cucurbita moschata]	[more]
XP_022927353.1	2.3e-237	94.77	heterogeneous nuclear ribonucleoprotein 1-like isoform X1 [Cucurbita moschata]	[more]
XP_008463611.1	2.9e-237	94.56	PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003723	RNA binding
GO:0003676	nucleic acid binding

Vocabulary: **INTERPRO**
Term	Definition
IPR035979	RBD_domain_sf
IPR034131	DAZAP1_RRM2
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR000504	RRM_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005634	nucleus
cellular_component	GO:1990904	ribonucleoprotein complex
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0030529	intracellular ribonucleoprotein complex
cellular_component	GO:0019013	viral nucleocapsid
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi08M000631	Bhi08M000631	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 105..177 e-value: 1.8E-24 score: 97.3 coord: 5..76 e-value: 1.2E-22 score: 91.2
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 6..72 e-value: 1.8E-15 score: 56.4 coord: 106..164 e-value: 9.0E-17 score: 60.6
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 104..181 score: 17.967
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 4..80 score: 17.848
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	G3DSA:3.30.70.330		coord: 97..189 e-value: 6.2E-26 score: 92.6
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	G3DSA:3.30.70.330		coord: 3..86 e-value: 9.3E-25 score: 88.7
None	No IPR available	PANTHER	PTHR44291	FAMILY NOT NAMED	coord: 1..477
None	No IPR available	CDD	cd12325	RRM1_hnRNPA_hnRNPD_like	coord: 6..76 e-value: 1.33492E-35 score: 126.161
IPR034131	DAZ-associated protein 1, RNA recognition motif 2	CDD	cd12327	RRM2_DAZAP1	coord: 102..181 e-value: 5.25448E-47 score: 157.913
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	SSF54928	RNA-binding domain, RBD	coord: 3..99
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	SSF54928	RNA-binding domain, RBD	coord: 100..203

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi08G000631	Csa1G181500	Cucumber (Chinese Long) v2	cuwgoB036
Bhi08G000631	MELO3C025543	Melon (DHL92) v3.5.1	mewgoB167
Bhi08G000631	ClCG01G010610	Watermelon (Charleston Gray)	wcgwgoB241
Bhi08G000631	CSPI01G15780	Wild cucumber (PI 183967)	cpiwgoB036
Bhi08G000631	Cucsa.180480	Cucumber (Gy14) v1	cgywgoB370
Bhi08G000631	CmaCh18G006000	Cucurbita maxima (Rimu)	cmawgoB0535
Bhi08G000631	CmaCh13G003830	Cucurbita maxima (Rimu)	cmawgoB0275
Bhi08G000631	CmoCh18G005940	Cucurbita moschata (Rifu)	cmowgoB0521
Bhi08G000631	CmoCh13G004080	Cucurbita moschata (Rifu)	cmowgoB0264
Bhi08G000631	Lsi02G011240	Bottle gourd (USVL1VR-Ls)	lsiwgoB257
Bhi08G000631	Cp4.1LG20g06600	Cucurbita pepo (Zucchini)	cpewgoB0642
Bhi08G000631	Cp4.1LG09g06540	Cucurbita pepo (Zucchini)	cpewgoB0042
Bhi08G000631	CsGy1G015480	Cucumber (Gy14) v2	cgybwgoB032
Bhi08G000631	MELO3C025543.2	Melon (DHL92) v3.6.1	medwgoB182
Bhi08G000631	Carg25112	Silver-seed gourd	carwgoB1217
Bhi08G000631	Carg25613	Silver-seed gourd	carwgoB0057
Bhi08G000631	CsaV3_1G017060	Cucumber (Chinese Long) v3	cucwgoB039
Bhi08G000631	CsaV3_UNG051390	Cucumber (Chinese Long) v3	cucwgoB671
Bhi08G000631	Cla009042	Watermelon (97103) v1	wgowmB511
Bhi08G000631	Cla97C01G010390	Watermelon (97103) v2	wgowmbB460

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi08G000631	Cucumber (Gy14) v2	cgybwgoB042
Bhi08G000631	Cucumber (Gy14) v2	cgybwgoB607
Bhi08G000631	Cucurbita maxima (Rimu)	cmawgoB0260
Bhi08G000631	Cucurbita moschata (Rifu)	cmowgoB0255
Bhi08G000631	Cucumber (Chinese Long) v2	cuwgoB047
Bhi08G000631	Silver-seed gourd	carwgoB1216