CSPI01G12530 (gene) Wild cucumber (PI 183967)

NameCSPI01G12530
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionYrdC domain-containing protein, mitochondrial
LocationChr1 : 7978242 .. 7981917 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACACACTTCCGGCGAAAATGGCTGACAGTCTCTCTCTAATCAGAACGTTTACAACTTTTCCCTCTTCTCAACTGGGTTCGTTTCAATCTTTCATCCCCTTTATCCTTTTGTATGTTTATTGTAGGATTGAAACATGAATTGACATAAATTATTACATTTTAGGTTCTTCCAATTATGGGATAGTTTCGTTCTTGCAACGAAATAGAGGATCAAGGGTTAGTTTTCTTAAAACGAATTGGAGTTTAGAGAAGTGTTGTATGCGTGTGGAGAATTGTTTGCAAGCACTTCGTCCTGCCTCTGAAGCTTTTGCTCAAGAGGCTACAGATGCTCTTAAAGCTGGGAAGGTTATTGCTGTCCCCACTGATACTCTTTATGGACTCTCTTGTGATGCTTGGTATGCTATTCCTATTATGGGTTTTTTTGTGCAATTGTCTTATTTTGTGAGTTTTGATTTTTTTTGGTGTGGAAGTTGATGTTACAACACCTGTTTGTTTGTTTTTTTTTTTTTTTGTCAATGATGATAGTGCTTTATAAATAGTAGTACAATCTTTCTTAAGAGGGGAGATTGATATATCAGTGGTCTTGTTTAGTACAAACAAAGTTCTTGGTGAGAGGTCTTGGTCAGGAGTGTTCACTCCCTTGGTTGTGTCATGGGTGGTGATCGTAGGAGATGTCACATTATTGTTAAAATTAAGACTCTTTTGAGTTGGCACTTGGCCGGTAGTCATCTAGGAGGAATATGGTGGATGGTGACTGGTGATGGGGAACAGCAGGGGGAGGTCTTCTTATTTAGTTAGCATGGTTAAGAAATGCTTAAAGAACTGATTGCTATTACCATACCATCAAAGTGTATCTTTCTGTTTGGTAGGTCAATCATAGGAACTCCAGAATTATACATGCTTAGTTTGAAGCAATTCTATATTAGGTGACCTGAAAATATTCCTAGAAAGCATGTGGGTGCGAACCAAACATGTTGAAAAGACTCGTGTTGGTTTGTGGAGACAATCTTCACTCTTGGAAGCAGTTTAAGACGAGCAAACAGTGTGACCAAGTCACTAGAGAATGCCGGGTCTATCAAGTTCCAAATCTGAATTCCAAATTCTAGTTTGAATCTTGGGCTCGGGGCATTATGAAAATTTTGTGAAAAAAAAAATATTTGGAGAGATGTGGTTAGGATTCCTTGTTTGGGCCTTAGTTCTTTAGGATTTCTGTATTTATCTCTCTTATGCACAACAACTAGGACTCTTTTTTGTTTTAACATTTTTGTTAGGCTAATATTGTGGTAGGCTCTTATTCCTTTTTATTTTTTATTTTTTATATGTAGTATGTATTCTTTCACTTGTACTAACGATAGCTTATGCTCAGTTTTCATAAAAAATAACAATAGAAAATAGACTTTTATGTAAAATTTTATTCTTAAACTCCAACATCAATATTTATTTGCTGATCTGTGCATAAGTCAGTTGACTGTTTATAAGAAGATAAAATCATCTTTTTTTTTTAAATCTCAAAGATGACAGTGAGCGATTACGTAAAAAACTTTCATTTATTTGATTGCCTATATATCTCTTAGTTGGCTCTTTCTTGTTCCAAAATCCACCATATTTCCCGTTTGATAGAATAATTATTTTACTGCATGAATTCTGAGGTAAATACTGCATAGTGATATACAATGTTATAAAATTGAGAGATACTTCTGAAATACATCCTTGTGTTGGAACATACTCGTTACCAGGCCCCACAGTCTTGAGGAATATAAAATGGTTATCGATTTGGTATAAATATTGATAAGTTTTTCAACTTCGTAAAAACACTCTTCTTTCATGTAATTATAGTGTAATTATAGGAAGTATATTCTATAATGTTGTTAAACAATGAGATCTGTCTTTCCGTAATGGAGGGTAACGCAATATTCATTTTCAAAGCACATGCGCAAAAAGTTGATGAACAAAATTAGAGAGGTTTTTTTTTTTTTTTTTTTTGTGAAACTATATGATCAAAGCAACCATAAAATTAATCACGTTGCAGTTTGCTTTTATTTAATTGTGGCTTCTGTGGGAATTGATTTTGCAGTTCTGCTGAAGCAGTCCATAGGATTTATGAAATTAAAGGACGTAAACTTACAAGCCCTCTCGCCATTTGTGTTGGTGATGTCTCTGACATAACTCGCTTTGCTGTAACAGACCATTTGCCTTCTGGTTTGCTTGATTCTCTCCTTCCTGGGCCTGTGACTGTTGTTCTGAAAAGAGGTATATATCAGAAATCTGCTTGTTTATGCTGAGGTAGTTAATAGTGCATTAAAGGTTGAAAGTGGTTTTGAAAAAGTAGCATTTAGGAGCATTGTTTGATTGAAATAAAGTAAATAGGTTGAACAACATTTCTGATCCTTAGACTGAAGGAGCAATTGAATCGATAAACTTTGGATTGTTCATGTACTTTAAATTTATACTAATCTAACCTCTACTTAATTCGAAATGTTCTGTCAAAAGCGTCAACTTTTATAATGCAATGACTTAAAATCTTTATTTCTTAGATACACCTATGGTATCTAATTTGTTTTTCAATCTACATTTGGAAGAAGTCTCGTTAAATCTTTAACAATATTTATTCACGATAGGGTCTAAAGTCACTAAACTGTTACTTCCATCTAAGATAAGGAACTAAAAATGCCTTTTGTAACAAAGAAAGAGTTCTTGAGAAACTTTTATAGGTAGGGTATTTAACAACAGTTGGGCTGGTTATGATAATCTTTCAGATATTCTGTTCTCTTCTTTTCACCTGATCCCATATCATTTCTTGGTGACTTGTAACCTATTGTTATAAGTGAGAAGCAGATGGGGCTTTGAGAGAGCTATGAGTTCTTGCGAGCTTACTTATTAACATTTTCTCTCTTACCAAACTTTAGCAGAAAATTATTTTCTTCAAAGCAATTTCAAATGCCCTTCTTGGAAATTAGTATATCTCACCAACTATAAAAATAAGATATTAATTTTTCACTTCCCTTGTTTTGTTGGATTGTTCTATATTATTTAAATAGTTGCCCCCTACTCCATGTTACAACCTGCATATCTGAGATTATGTTCAGTTATATTTTAGTCTCCAAACTTCCCGTTGTCTGAGTTTTTACATTTTAGGTATTTTGCAGGTGAATCGAGTGTTCTTGACAAGTCTTTGAACCCTGGATTGGACAGTATAGGAGTTCGTGTACCTGATGCTGACTTTATTCGGCTGATTTCACGTAGATCAGAGACAGCATTAGCTCTTACAAGTGCTAATTTAAGTGGACAACCAAGCAGTGTTTGTGTTAATGACTTTGAAAATCTATGGCAACACTGTGCTTATGTATACGATGGGGGTGTTCTTCCTGCTGGACGAGCAGGCTCAACGATCATCGACCTCACTGAGCAAGGCACATTTAAGATTATAAGAGCTGGAAGGTACATTTCTTCTTGTGTTTCTTCTATTTACCGTAAAAAGTGAAAATAGTCTTCTATTGCAATGACTTTGTCCTTTGATTCTGAAGTTGTGATTCAAAAGATAGCAAATCAGAAGTGATTATGTTTCATTGTGATAGTTTTCTCATGATGTTCACTGTACATTTGCAGTGCAGAGGAGCAGACTATTGCAACACTTGAAAGGTATTCACTATTAGAAGCAGCAGCTACTATTTGA

mRNA sequence

ATGAACACACTTCCGGCGAAAATGGCTGACAGTCTCTCTCTAATCAGAACGTTTACAACTTTTCCCTCTTCTCAACTGGGTTCTTCCAATTATGGGATAGTTTCGTTCTTGCAACGAAATAGAGGATCAAGGGTTAGTTTTCTTAAAACGAATTGGAGTTTAGAGAAGTGTTGTATGCGTGTGGAGAATTGTTTGCAAGCACTTCGTCCTGCCTCTGAAGCTTTTGCTCAAGAGGCTACAGATGCTCTTAAAGCTGGGAAGGTTATTGCTGTCCCCACTGATACTCTTTATGGACTCTCTTGTGATGCTTGTTCTGCTGAAGCAGTCCATAGGATTTATGAAATTAAAGGACGTAAACTTACAAGCCCTCTCGCCATTTGTGTTGGTGATGTCTCTGACATAACTCGCTTTGCTGTAACAGACCATTTGCCTTCTGGTTTGCTTGATTCTCTCCTTCCTGGGCCTGTGACTGTTGTTCTGAAAAGAGGTGAATCGAGTGTTCTTGACAAGTCTTTGAACCCTGGATTGGACAGTATAGGAGTTCGTGTACCTGATGCTGACTTTATTCGGCTGATTTCACGTAGATCAGAGACAGCATTAGCTCTTACAAGTGCTAATTTAAGTGGACAACCAAGCAGTGTTTGTGTTAATGACTTTGAAAATCTATGGCAACACTGTGCTTATGTATACGATGGGGGTGTTCTTCCTGCTGGACGAGCAGGCTCAACGATCATCGACCTCACTGAGCAAGGCACATTTAAGATTATAAGAGCTGGAAGTGCAGAGGAGCAGACTATTGCAACACTTGAAAGGTATTCACTATTAGAAGCAGCAGCTACTATTTGA

Coding sequence (CDS)

ATGAACACACTTCCGGCGAAAATGGCTGACAGTCTCTCTCTAATCAGAACGTTTACAACTTTTCCCTCTTCTCAACTGGGTTCTTCCAATTATGGGATAGTTTCGTTCTTGCAACGAAATAGAGGATCAAGGGTTAGTTTTCTTAAAACGAATTGGAGTTTAGAGAAGTGTTGTATGCGTGTGGAGAATTGTTTGCAAGCACTTCGTCCTGCCTCTGAAGCTTTTGCTCAAGAGGCTACAGATGCTCTTAAAGCTGGGAAGGTTATTGCTGTCCCCACTGATACTCTTTATGGACTCTCTTGTGATGCTTGTTCTGCTGAAGCAGTCCATAGGATTTATGAAATTAAAGGACGTAAACTTACAAGCCCTCTCGCCATTTGTGTTGGTGATGTCTCTGACATAACTCGCTTTGCTGTAACAGACCATTTGCCTTCTGGTTTGCTTGATTCTCTCCTTCCTGGGCCTGTGACTGTTGTTCTGAAAAGAGGTGAATCGAGTGTTCTTGACAAGTCTTTGAACCCTGGATTGGACAGTATAGGAGTTCGTGTACCTGATGCTGACTTTATTCGGCTGATTTCACGTAGATCAGAGACAGCATTAGCTCTTACAAGTGCTAATTTAAGTGGACAACCAAGCAGTGTTTGTGTTAATGACTTTGAAAATCTATGGCAACACTGTGCTTATGTATACGATGGGGGTGTTCTTCCTGCTGGACGAGCAGGCTCAACGATCATCGACCTCACTGAGCAAGGCACATTTAAGATTATAAGAGCTGGAAGTGCAGAGGAGCAGACTATTGCAACACTTGAAAGGTATTCACTATTAGAAGCAGCAGCTACTATTTGA
BLAST of CSPI01G12530 vs. Swiss-Prot
Match: YRDC_BOVIN (YrdC domain-containing protein, mitochondrial OS=Bos taurus GN=YRDC PE=2 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 9.4e-46
Identity = 97/202 (48.02%), Postives = 133/202 (65.84%), Query Frame = 1

Query: 79  ATDALKAGKVIAVPTDTLYGLSCDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFA 138
           A   L+AG V+AVPTDTLYGL+C A  +EA+  +Y +KGR  T PLA+C+G V+D+ R+ 
Sbjct: 71  AVAELRAGAVVAVPTDTLYGLACSASCSEALGAVYRVKGRSETKPLAVCLGRVADVYRYC 130

Query: 139 VTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSET 198
               +P GLL  LLPGPVT+V++R E   L+K LNP    +G+R+PD  F++ +++    
Sbjct: 131 HV-RVPEGLLKDLLPGPVTLVMERSEE--LNKDLNPFTPLVGIRIPDHAFMQDLAQMFGG 190

Query: 199 ALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL-----PAGRAGSTIIDLTEQGTF 258
            LALTSANLS Q SS+ V +F++LW H + + DGG +     P  R GST++DL+  G F
Sbjct: 191 PLALTSANLSSQSSSLNVEEFQDLWPHLSLIIDGGPIGDGQSPECRLGSTVVDLSVPGKF 250

Query: 259 KIIRAGSAEEQTIATLERYSLL 276
            IIR G A E T A L+ Y LL
Sbjct: 251 GIIRPGCALESTSAILQEYGLL 269

BLAST of CSPI01G12530 vs. Swiss-Prot
Match: YRDC_HUMAN (YrdC domain-containing protein, mitochondrial OS=Homo sapiens GN=YRDC PE=1 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 2.0e-43
Identity = 97/208 (46.63%), Postives = 135/208 (64.90%), Query Frame = 1

Query: 79  ATDALKAGKVIAVPTDTLYGLSCDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFA 138
           A   L+AG V+AVPTDTLYGL+C A  + A+  +Y +KGR    PLA+C+G V+D+ R+ 
Sbjct: 73  AVAELRAGAVVAVPTDTLYGLACAASCSAALRAVYRLKGRSEAKPLAVCLGRVADVYRYC 132

Query: 139 VTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSET 198
               +P GLL  LLPGPVT+V++R E   L+K LNP    +G+R+PD  F++ +++  E 
Sbjct: 133 RV-RVPEGLLKDLLPGPVTLVMERSEE--LNKDLNPFTPLVGIRIPDHAFMQDLAQMFEG 192

Query: 199 ALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL-----PAGRAGSTIIDLTEQGTF 258
            LALTSANLS Q SS+ V +F++LW   + V DGG +     P  R GST++DL+  G F
Sbjct: 193 PLALTSANLSSQASSLNVEEFQDLWPQLSLVIDGGQIGDGQSPECRLGSTVVDLSVPGKF 252

Query: 259 KIIRAGSAEEQTIATL-ERYSLLEAAAT 281
            IIR G A E T A L ++Y LL + A+
Sbjct: 253 GIIRPGCALESTTAILQQKYGLLPSHAS 277

BLAST of CSPI01G12530 vs. Swiss-Prot
Match: YRDC_RAT (YrdC domain-containing protein, mitochondrial OS=Rattus norvegicus GN=Yrdc PE=2 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 2.2e-42
Identity = 94/203 (46.31%), Postives = 131/203 (64.53%), Query Frame = 1

Query: 79  ATDALKAGKVIAVPTDTLYGLSCDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFA 138
           A   L+AG V+AVPTDTLYGL+C A  + A+  +Y +KGR    PLA+C+G V+D+ R+ 
Sbjct: 74  AVAELRAGAVVAVPTDTLYGLACSASCSAALSCVYRLKGRSEAKPLAVCLGRVADVYRYC 133

Query: 139 VTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSET 198
               +P  LL+ L PGPVT+V++R E   L+K LNP    +G+R+PD  F+  +++    
Sbjct: 134 QV-RVPRELLEDLFPGPVTLVMERSEE--LNKDLNPFTPLVGIRIPDHAFMLDLAQMFGG 193

Query: 199 ALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL-----PAGRAGSTIIDLTEQGTF 258
            LALTSANLS Q SS+ V +F++LW H + V DGG +     P  R GST++DL+  G F
Sbjct: 194 PLALTSANLSSQASSLSVEEFQDLWPHLSLVIDGGPIGDSESPECRLGSTVVDLSVPGKF 253

Query: 259 KIIRAGSAEEQTIATLE-RYSLL 276
            IIR+G A E T A L+ +Y LL
Sbjct: 254 GIIRSGCALENTTAILQGKYGLL 273

BLAST of CSPI01G12530 vs. Swiss-Prot
Match: YRDC_MOUSE (YrdC domain-containing protein, mitochondrial OS=Mus musculus GN=Yrdc PE=1 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 2.8e-42
Identity = 94/203 (46.31%), Postives = 131/203 (64.53%), Query Frame = 1

Query: 79  ATDALKAGKVIAVPTDTLYGLSCDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFA 138
           A   L+AG V+AVPTDTLYGL+C A S+ A+  +Y +KGR    PLA+C+G V+D+ R+ 
Sbjct: 74  AVAELRAGAVVAVPTDTLYGLACSASSSAALSCVYRLKGRSEAKPLAVCLGRVADVYRYC 133

Query: 139 VTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSET 198
               +P  LL+ L PGPVT+V++R E   L+K LNP    +G+R+PD  F+  +++    
Sbjct: 134 QV-RVPRELLEDLFPGPVTLVMERSEE--LNKDLNPFTRLVGIRIPDHAFMLDLAQMFGG 193

Query: 199 ALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL-----PAGRAGSTIIDLTEQGTF 258
            LALTSANLS Q SS+ V +F++LW H + V DGG +     P  R GST++DL+  G F
Sbjct: 194 PLALTSANLSSQASSLSVEEFQDLWPHLSLVIDGGPIGDSQSPECRLGSTVVDLSVPGKF 253

Query: 259 KIIRAGSAEEQTIATL-ERYSLL 276
            IIR G A E T + L ++Y LL
Sbjct: 254 GIIRPGCALENTTSILQQKYGLL 273

BLAST of CSPI01G12530 vs. Swiss-Prot
Match: TSAC_METJA (Putative threonylcarbamoyl-AMP synthase OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0062 PE=3 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 5.6e-22
Identity = 67/185 (36.22%), Postives = 103/185 (55.68%), Query Frame = 1

Query: 86  GKVIAVPTDTLYGLSCDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPS 145
           GK++   TDTLYG+S +A + +AV ++Y IK R+   PL+ICV D ++I ++A  + L  
Sbjct: 32  GKIVICGTDTLYGISANALNEKAVRKVYNIKRREFNKPLSICVRDKNEIEKYAYVNDLAK 91

Query: 146 GLLDSLLPGPVTVVLKR--GESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETALALT 205
            ++D  LPGP+T++LK+  G   ++ K      D IG+R+PD   IR +   S   L  T
Sbjct: 92  KIIDKFLPGPLTIILKKKPGIPDIVAK------DYIGIRIPDEPIIREL---SIVPLTTT 151

Query: 206 SANLSGQPSSVCVNDFE-NLWQHCAYVYDGGVLPAGRAGSTIIDLTEQGTFKIIRAGSAE 265
           SAN+SG+ S   V++ +  + +   YV D G     +  STII + E      IR G   
Sbjct: 152 SANISGKESPTTVDEIDKEVLKKVDYVIDIGKCKYSKP-STIIKI-EDDKIISIREGVIP 205

Query: 266 EQTIA 268
            Q +A
Sbjct: 212 IQKLA 205

BLAST of CSPI01G12530 vs. TrEMBL
Match: A0A0A0LUP4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G077210 PE=4 SV=1)

HSP 1 Score: 551.6 bits (1420), Expect = 5.6e-154
Identity = 280/281 (99.64%), Postives = 281/281 (100.00%), Query Frame = 1

Query: 1   MNTLPAKMADSLSLIRTFTTFPSSQLGSSNYGIVSFLQRNRGSRVSFLKTNWSLEKCCMR 60
           MNTLPAKMADSLSLIRTFTTFPSSQLGSSNYGIVSFLQRNRGSRVSFLKTNWSLEKCCMR
Sbjct: 1   MNTLPAKMADSLSLIRTFTTFPSSQLGSSNYGIVSFLQRNRGSRVSFLKTNWSLEKCCMR 60

Query: 61  VENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLSCDACSAEAVHRIYEIKGRKL 120
           VENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGL+CDACSAEAVHRIYEIKGRKL
Sbjct: 61  VENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKL 120

Query: 121 TSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIG 180
           TSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIG
Sbjct: 121 TSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIG 180

Query: 181 VRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRA 240
           VRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRA
Sbjct: 181 VRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRA 240

Query: 241 GSTIIDLTEQGTFKIIRAGSAEEQTIATLERYSLLEAAATI 282
           GSTIIDLTEQGTFKIIRAGSAEEQTIATLERYSLLEAAATI
Sbjct: 241 GSTIIDLTEQGTFKIIRAGSAEEQTIATLERYSLLEAAATI 281

BLAST of CSPI01G12530 vs. TrEMBL
Match: A0A061GWW4_THECC (DHBP synthase RibB-like alpha/beta domain isoform 1 OS=Theobroma cacao GN=TCM_042043 PE=4 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 2.2e-97
Identity = 184/255 (72.16%), Postives = 216/255 (84.71%), Query Frame = 1

Query: 27  GSSNYGIVSFLQRNRGSRVSFLKTNWS-LEKCCMRVENCLQALRPASEAFAQEATDALKA 86
           G    G V FLQ+ R  R  F K   S +E+C + VE+ L  + PA++ +A EA  ALKA
Sbjct: 72  GVPKLGFVPFLQQKRRFRGGFSKKMGSNVERCEVGVESKLGLVHPATKFYADEAVIALKA 131

Query: 87  GKVIAVPTDTLYGLSCDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPS 146
           GKVIAVPTDTLYG +CDACS+EAV++IYEIKGRK TSPLAICVGDV DI RFAVTDHLP 
Sbjct: 132 GKVIAVPTDTLYGFACDACSSEAVNKIYEIKGRKHTSPLAICVGDVPDIKRFAVTDHLPY 191

Query: 147 GLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSA 206
           GLLDSLLPGPVTVVL RGESS+L+KSLNPGLDSIGVRVPD+DFIR+I+R +E+ALALTSA
Sbjct: 192 GLLDSLLPGPVTVVLGRGESSLLEKSLNPGLDSIGVRVPDSDFIRIIARDAESALALTSA 251

Query: 207 NLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLTEQGTFKIIRAGSAEEQT 266
           NLSGQPSSV +NDFENLW+HCAYVYDGGVLPAGRAGST++DLT+ G +KI+R GSA+E+T
Sbjct: 252 NLSGQPSSVSINDFENLWEHCAYVYDGGVLPAGRAGSTVVDLTKPGKYKILRPGSAKEET 311

Query: 267 IATLERYSLLEAAAT 281
           +A LE+YSLLE AA+
Sbjct: 312 VAILEKYSLLEEAAS 326

BLAST of CSPI01G12530 vs. TrEMBL
Match: A0A061GXZ3_THECC (DHBP synthase RibB-like alpha/beta domain isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_042043 PE=4 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 2.8e-97
Identity = 183/250 (73.20%), Postives = 215/250 (86.00%), Query Frame = 1

Query: 32  GIVSFLQRNRGSRVSFLKTNWS-LEKCCMRVENCLQALRPASEAFAQEATDALKAGKVIA 91
           G V FLQ+ R  R  F K   S +E+C + VE+ L  + PA++ +A EA  ALKAGKVIA
Sbjct: 27  GFVPFLQQKRRFRGGFSKKMGSNVERCEVGVESKLGLVHPATKFYADEAVIALKAGKVIA 86

Query: 92  VPTDTLYGLSCDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDS 151
           VPTDTLYG +CDACS+EAV++IYEIKGRK TSPLAICVGDV DI RFAVTDHLP GLLDS
Sbjct: 87  VPTDTLYGFACDACSSEAVNKIYEIKGRKHTSPLAICVGDVPDIKRFAVTDHLPYGLLDS 146

Query: 152 LLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSGQ 211
           LLPGPVTVVL RGESS+L+KSLNPGLDSIGVRVPD+DFIR+I+R +E+ALALTSANLSGQ
Sbjct: 147 LLPGPVTVVLGRGESSLLEKSLNPGLDSIGVRVPDSDFIRIIARDAESALALTSANLSGQ 206

Query: 212 PSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLTEQGTFKIIRAGSAEEQTIATLE 271
           PSSV +NDFENLW+HCAYVYDGGVLPAGRAGST++DLT+ G +KI+R GSA+E+T+A LE
Sbjct: 207 PSSVSINDFENLWEHCAYVYDGGVLPAGRAGSTVVDLTKPGKYKILRPGSAKEETVAILE 266

Query: 272 RYSLLEAAAT 281
           +YSLLE AA+
Sbjct: 267 KYSLLEEAAS 276

BLAST of CSPI01G12530 vs. TrEMBL
Match: D7SKX9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g02920 PE=4 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 1.1e-96
Identity = 186/276 (67.39%), Postives = 225/276 (81.52%), Query Frame = 1

Query: 4   LPAKMADSLSLIRTFTTFPSSQLGSSNYGIVSFLQRNRGSRVSFLKTNWSLEKCCMRVEN 63
           +PAK A+  SL+ TF + P   LG + +G V  L++NR  RVSF K   ++      + +
Sbjct: 3   IPAKFAER-SLLLTFRS-PLRALGVAKFGFVQILKQNRRFRVSFPKKMEAV------MGS 62

Query: 64  CLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLSCDACSAEAVHRIYEIKGRKLTSP 123
            L  +RPA++A A+EA +A+KAGKVIAVPTDTLYG +CDACS+EAV+RIYEIKGRK TSP
Sbjct: 63  ELGVVRPATDAHAEEAIEAIKAGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSP 122

Query: 124 LAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRV 183
           LAICVGDV DI RFAVTDHLP GLL SLLPGPVTVVL+RGE S+++KSLNPGLDSIGVRV
Sbjct: 123 LAICVGDVLDIQRFAVTDHLPDGLLGSLLPGPVTVVLRRGELSIIEKSLNPGLDSIGVRV 182

Query: 184 PDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGST 243
           PD DFIR+I+  SETALALTSANLSGQPSSVC+ DFENLW+HCAYVYDGGVLP+GRAGST
Sbjct: 183 PDCDFIRVIAHGSETALALTSANLSGQPSSVCIKDFENLWEHCAYVYDGGVLPSGRAGST 242

Query: 244 IIDLTEQGTFKIIRAGSAEEQTIATLERYSLLEAAA 280
           ++DL+  G +KI+R GSA E+T+A LER+SL+  AA
Sbjct: 243 VVDLSRLGKYKILRPGSAMEETVAILERHSLMPEAA 270

BLAST of CSPI01G12530 vs. TrEMBL
Match: A0A059D561_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B02494 PE=4 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 2.2e-94
Identity = 182/273 (66.67%), Postives = 219/273 (80.22%), Query Frame = 1

Query: 4   LPAKMADSLSLIRTFTTFPSSQLGSSNYGIVSFLQRNRGSRVSFLKTNWSLEKCCMRVEN 63
           +P K+A +L  +     FP S  G    G V   +++R       +   SL+KC    E 
Sbjct: 3   VPTKIAHTLPPLLLHARFPLS--GVPRNGFVRIPEQSRRLESKMAR---SLDKC----EG 62

Query: 64  CLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLSCDACSAEAVHRIYEIKGRKLTSP 123
            L  +R A+E  A EA +ALK+GKVIAVPTDTLYG +CDACSAEAV+RIYEIKGRK TSP
Sbjct: 63  KLDVVREATEPHAPEAVEALKSGKVIAVPTDTLYGFACDACSAEAVNRIYEIKGRKHTSP 122

Query: 124 LAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRV 183
           LAICVGDVSDI RFAVT+HLP GLLDSLLPGPVTV+L+RGESS+LDKSLNPGLDSIGVRV
Sbjct: 123 LAICVGDVSDIERFAVTNHLPHGLLDSLLPGPVTVILRRGESSILDKSLNPGLDSIGVRV 182

Query: 184 PDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGST 243
           PD +FIR+I+R + +ALALTSANLSGQPSSVC+ DFENLW+HCAYVYDGGVLP+GRAGST
Sbjct: 183 PDCNFIRVIARGAGSALALTSANLSGQPSSVCIKDFENLWEHCAYVYDGGVLPSGRAGST 242

Query: 244 IIDLTEQGTFKIIRAGSAEEQTIATLERYSLLE 277
           I+DLT+ G++KI+R GSAEE+T+A L+R+SL+E
Sbjct: 243 IVDLTKLGSYKILRPGSAEEETVAILQRHSLIE 266

BLAST of CSPI01G12530 vs. TAIR10
Match: AT5G60590.2 (AT5G60590.2 DHBP synthase RibB-like alpha/beta domain)

HSP 1 Score: 330.9 bits (847), Expect = 7.8e-91
Identity = 174/276 (63.04%), Postives = 210/276 (76.09%), Query Frame = 1

Query: 4   LPAKMADSLSLIRTFTTFPSSQLGSSNYGIVSFLQRNRGSRVSFLKTN-WSLEKC--CMR 63
           L  ++A+ L  I    + P  + G S     S   ++R  R    K   WSLE+   C+ 
Sbjct: 3   LSTRLAEKLPGILPAPSSPLLRKGVSELRCFSIANQSRRLRWGLQKKMVWSLERAETCVV 62

Query: 64  VENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLSCDACSAEAVHRIYEIKGRKL 123
            ++CL  + PA+EA+AQEA +A+K+ KVIAVPTDTLYG +CDACS EAV RIYEIKGRKL
Sbjct: 63  SKSCL--VHPATEAYAQEAIEAIKSEKVIAVPTDTLYGFACDACSLEAVSRIYEIKGRKL 122

Query: 124 TSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIG 183
           TSPLAICVGDV DI R A T HLP GLLDSLLPGPVT+VL+RGESS+L+KSLNPG+ +IG
Sbjct: 123 TSPLAICVGDVLDIKRVATTSHLPHGLLDSLLPGPVTLVLQRGESSILEKSLNPGIGTIG 182

Query: 184 VRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRA 243
           VRVPD +FIR +SR S + LALTSANLSG  SSVCV DFENLWQHCAYVYDGG+LP+GRA
Sbjct: 183 VRVPDCEFIREVSRGSGSVLALTSANLSGDRSSVCVKDFENLWQHCAYVYDGGLLPSGRA 242

Query: 244 GSTIIDLTEQGTFKIIRAGSAEEQTIATLERYSLLE 277
           GSTI+DLT+ G +KIIR GSA++ T+A LE+Y L E
Sbjct: 243 GSTIVDLTKVGKYKIIRPGSAKQATVAILEKYLLEE 276

BLAST of CSPI01G12530 vs. TAIR10
Match: AT3G01920.1 (AT3G01920.1 DHBP synthase RibB-like alpha/beta domain)

HSP 1 Score: 63.2 bits (152), Expect = 3.0e-10
Identity = 62/210 (29.52%), Postives = 93/210 (44.29%), Query Frame = 1

Query: 77  QEATDALKAGKVIAVPTDTLYGLSCDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITR 136
           Q   D LK G V  +PTDT+Y ++CD  +  AV R+  IK  + + PL+I    + DI  
Sbjct: 84  QPVIDLLKQGAVGVIPTDTVYAIACDCKNHSAVERLRRIKKIESSKPLSILCRSLRDIDT 143

Query: 137 FAVTDHLPSG----------LLDSLLPGPVTVVLKR-----------GESSVLDKSLNPG 196
           F  T   P G           +   LPGP T +L             G +SV   S    
Sbjct: 144 F--TMGFPRGDGHGHANVFRAVKQCLPGPYTFILTASKELPKQCVGYGTTSVKYASRK-- 203

Query: 197 LDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLW-----QHCAYVY 256
             ++GVR+ D    + I ++ +  L  TS  + G   +  + D   +      +   +V 
Sbjct: 204 --NVGVRISDDALCQAILQQMDAPLICTS--VKGPKENEWMIDPTAIGDIYGPEGLDFVV 263

Query: 257 DGGVLPAGRAGSTIIDLTEQGTF-KIIRAG 260
           DGG+  A    STI+D+T  G + K+IR G
Sbjct: 264 DGGIRVA--EPSTIVDMT--GPYPKVIREG 281

BLAST of CSPI01G12530 vs. NCBI nr
Match: gi|449462123|ref|XP_004148791.1| (PREDICTED: yrdC domain-containing protein, mitochondrial [Cucumis sativus])

HSP 1 Score: 551.6 bits (1420), Expect = 8.0e-154
Identity = 280/281 (99.64%), Postives = 281/281 (100.00%), Query Frame = 1

Query: 1   MNTLPAKMADSLSLIRTFTTFPSSQLGSSNYGIVSFLQRNRGSRVSFLKTNWSLEKCCMR 60
           MNTLPAKMADSLSLIRTFTTFPSSQLGSSNYGIVSFLQRNRGSRVSFLKTNWSLEKCCMR
Sbjct: 1   MNTLPAKMADSLSLIRTFTTFPSSQLGSSNYGIVSFLQRNRGSRVSFLKTNWSLEKCCMR 60

Query: 61  VENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLSCDACSAEAVHRIYEIKGRKL 120
           VENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGL+CDACSAEAVHRIYEIKGRKL
Sbjct: 61  VENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKL 120

Query: 121 TSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIG 180
           TSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIG
Sbjct: 121 TSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIG 180

Query: 181 VRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRA 240
           VRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRA
Sbjct: 181 VRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRA 240

Query: 241 GSTIIDLTEQGTFKIIRAGSAEEQTIATLERYSLLEAAATI 282
           GSTIIDLTEQGTFKIIRAGSAEEQTIATLERYSLLEAAATI
Sbjct: 241 GSTIIDLTEQGTFKIIRAGSAEEQTIATLERYSLLEAAATI 281

BLAST of CSPI01G12530 vs. NCBI nr
Match: gi|659130663|ref|XP_008465284.1| (PREDICTED: yrdC domain-containing protein, mitochondrial [Cucumis melo])

HSP 1 Score: 534.3 bits (1375), Expect = 1.3e-148
Identity = 269/281 (95.73%), Postives = 277/281 (98.58%), Query Frame = 1

Query: 1   MNTLPAKMADSLSLIRTFTTFPSSQLGSSNYGIVSFLQRNRGSRVSFLKTNWSLEKCCMR 60
           MNTLPAKMADSLSLIRTF TFPSS LGSSNYGIVSFLQRNRGSRVSFLKT+WSLEKCCM 
Sbjct: 1   MNTLPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMP 60

Query: 61  VENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLSCDACSAEAVHRIYEIKGRKL 120
           VENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGL+CDACSAEAVHRIYEIKGRKL
Sbjct: 61  VENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKL 120

Query: 121 TSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIG 180
           TSPLAICVG VSDITR+A+TDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIG
Sbjct: 121 TSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIG 180

Query: 181 VRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRA 240
           VRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRA
Sbjct: 181 VRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRA 240

Query: 241 GSTIIDLTEQGTFKIIRAGSAEEQTIATLERYSLLEAAATI 282
           GSTI+DLTE+GTFKIIRAGSAE+QTIATL+RYSLLEAAATI
Sbjct: 241 GSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAAATI 281

BLAST of CSPI01G12530 vs. NCBI nr
Match: gi|590590392|ref|XP_007016721.1| (DHBP synthase RibB-like alpha/beta domain isoform 1 [Theobroma cacao])

HSP 1 Score: 363.6 bits (932), Expect = 3.1e-97
Identity = 184/255 (72.16%), Postives = 216/255 (84.71%), Query Frame = 1

Query: 27  GSSNYGIVSFLQRNRGSRVSFLKTNWS-LEKCCMRVENCLQALRPASEAFAQEATDALKA 86
           G    G V FLQ+ R  R  F K   S +E+C + VE+ L  + PA++ +A EA  ALKA
Sbjct: 72  GVPKLGFVPFLQQKRRFRGGFSKKMGSNVERCEVGVESKLGLVHPATKFYADEAVIALKA 131

Query: 87  GKVIAVPTDTLYGLSCDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPS 146
           GKVIAVPTDTLYG +CDACS+EAV++IYEIKGRK TSPLAICVGDV DI RFAVTDHLP 
Sbjct: 132 GKVIAVPTDTLYGFACDACSSEAVNKIYEIKGRKHTSPLAICVGDVPDIKRFAVTDHLPY 191

Query: 147 GLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSA 206
           GLLDSLLPGPVTVVL RGESS+L+KSLNPGLDSIGVRVPD+DFIR+I+R +E+ALALTSA
Sbjct: 192 GLLDSLLPGPVTVVLGRGESSLLEKSLNPGLDSIGVRVPDSDFIRIIARDAESALALTSA 251

Query: 207 NLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLTEQGTFKIIRAGSAEEQT 266
           NLSGQPSSV +NDFENLW+HCAYVYDGGVLPAGRAGST++DLT+ G +KI+R GSA+E+T
Sbjct: 252 NLSGQPSSVSINDFENLWEHCAYVYDGGVLPAGRAGSTVVDLTKPGKYKILRPGSAKEET 311

Query: 267 IATLERYSLLEAAAT 281
           +A LE+YSLLE AA+
Sbjct: 312 VAILEKYSLLEEAAS 326

BLAST of CSPI01G12530 vs. NCBI nr
Match: gi|590590395|ref|XP_007016722.1| (DHBP synthase RibB-like alpha/beta domain isoform 2, partial [Theobroma cacao])

HSP 1 Score: 363.2 bits (931), Expect = 4.0e-97
Identity = 183/250 (73.20%), Postives = 215/250 (86.00%), Query Frame = 1

Query: 32  GIVSFLQRNRGSRVSFLKTNWS-LEKCCMRVENCLQALRPASEAFAQEATDALKAGKVIA 91
           G V FLQ+ R  R  F K   S +E+C + VE+ L  + PA++ +A EA  ALKAGKVIA
Sbjct: 27  GFVPFLQQKRRFRGGFSKKMGSNVERCEVGVESKLGLVHPATKFYADEAVIALKAGKVIA 86

Query: 92  VPTDTLYGLSCDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDS 151
           VPTDTLYG +CDACS+EAV++IYEIKGRK TSPLAICVGDV DI RFAVTDHLP GLLDS
Sbjct: 87  VPTDTLYGFACDACSSEAVNKIYEIKGRKHTSPLAICVGDVPDIKRFAVTDHLPYGLLDS 146

Query: 152 LLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSGQ 211
           LLPGPVTVVL RGESS+L+KSLNPGLDSIGVRVPD+DFIR+I+R +E+ALALTSANLSGQ
Sbjct: 147 LLPGPVTVVLGRGESSLLEKSLNPGLDSIGVRVPDSDFIRIIARDAESALALTSANLSGQ 206

Query: 212 PSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLTEQGTFKIIRAGSAEEQTIATLE 271
           PSSV +NDFENLW+HCAYVYDGGVLPAGRAGST++DLT+ G +KI+R GSA+E+T+A LE
Sbjct: 207 PSSVSINDFENLWEHCAYVYDGGVLPAGRAGSTVVDLTKPGKYKILRPGSAKEETVAILE 266

Query: 272 RYSLLEAAAT 281
           +YSLLE AA+
Sbjct: 267 KYSLLEEAAS 276

BLAST of CSPI01G12530 vs. NCBI nr
Match: gi|225435305|ref|XP_002285123.1| (PREDICTED: yrdC domain-containing protein, mitochondrial isoform X1 [Vitis vinifera])

HSP 1 Score: 361.3 bits (926), Expect = 1.5e-96
Identity = 186/276 (67.39%), Postives = 225/276 (81.52%), Query Frame = 1

Query: 4   LPAKMADSLSLIRTFTTFPSSQLGSSNYGIVSFLQRNRGSRVSFLKTNWSLEKCCMRVEN 63
           +PAK A+  SL+ TF + P   LG + +G V  L++NR  RVSF K   ++      + +
Sbjct: 3   IPAKFAER-SLLLTFRS-PLRALGVAKFGFVQILKQNRRFRVSFPKKMEAV------MGS 62

Query: 64  CLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLSCDACSAEAVHRIYEIKGRKLTSP 123
            L  +RPA++A A+EA +A+KAGKVIAVPTDTLYG +CDACS+EAV+RIYEIKGRK TSP
Sbjct: 63  ELGVVRPATDAHAEEAIEAIKAGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSP 122

Query: 124 LAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRV 183
           LAICVGDV DI RFAVTDHLP GLL SLLPGPVTVVL+RGE S+++KSLNPGLDSIGVRV
Sbjct: 123 LAICVGDVLDIQRFAVTDHLPDGLLGSLLPGPVTVVLRRGELSIIEKSLNPGLDSIGVRV 182

Query: 184 PDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGST 243
           PD DFIR+I+  SETALALTSANLSGQPSSVC+ DFENLW+HCAYVYDGGVLP+GRAGST
Sbjct: 183 PDCDFIRVIAHGSETALALTSANLSGQPSSVCIKDFENLWEHCAYVYDGGVLPSGRAGST 242

Query: 244 IIDLTEQGTFKIIRAGSAEEQTIATLERYSLLEAAA 280
           ++DL+  G +KI+R GSA E+T+A LER+SL+  AA
Sbjct: 243 VVDLSRLGKYKILRPGSAMEETVAILERHSLMPEAA 270

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
YRDC_BOVIN9.4e-4648.02YrdC domain-containing protein, mitochondrial OS=Bos taurus GN=YRDC PE=2 SV=1[more]
YRDC_HUMAN2.0e-4346.63YrdC domain-containing protein, mitochondrial OS=Homo sapiens GN=YRDC PE=1 SV=1[more]
YRDC_RAT2.2e-4246.31YrdC domain-containing protein, mitochondrial OS=Rattus norvegicus GN=Yrdc PE=2 ... [more]
YRDC_MOUSE2.8e-4246.31YrdC domain-containing protein, mitochondrial OS=Mus musculus GN=Yrdc PE=1 SV=1[more]
TSAC_METJA5.6e-2236.22Putative threonylcarbamoyl-AMP synthase OS=Methanocaldococcus jannaschii (strain... [more]
Match NameE-valueIdentityDescription
A0A0A0LUP4_CUCSA5.6e-15499.64Uncharacterized protein OS=Cucumis sativus GN=Csa_1G077210 PE=4 SV=1[more]
A0A061GWW4_THECC2.2e-9772.16DHBP synthase RibB-like alpha/beta domain isoform 1 OS=Theobroma cacao GN=TCM_04... [more]
A0A061GXZ3_THECC2.8e-9773.20DHBP synthase RibB-like alpha/beta domain isoform 2 (Fragment) OS=Theobroma caca... [more]
D7SKX9_VITVI1.1e-9667.39Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g02920 PE=4 SV=... [more]
A0A059D561_EUCGR2.2e-9466.67Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B02494 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G60590.27.8e-9163.04 DHBP synthase RibB-like alpha/beta domain[more]
AT3G01920.13.0e-1029.52 DHBP synthase RibB-like alpha/beta domain[more]
Match NameE-valueIdentityDescription
gi|449462123|ref|XP_004148791.1|8.0e-15499.64PREDICTED: yrdC domain-containing protein, mitochondrial [Cucumis sativus][more]
gi|659130663|ref|XP_008465284.1|1.3e-14895.73PREDICTED: yrdC domain-containing protein, mitochondrial [Cucumis melo][more]
gi|590590392|ref|XP_007016721.1|3.1e-9772.16DHBP synthase RibB-like alpha/beta domain isoform 1 [Theobroma cacao][more]
gi|590590395|ref|XP_007016722.1|4.0e-9773.20DHBP synthase RibB-like alpha/beta domain isoform 2, partial [Theobroma cacao][more]
gi|225435305|ref|XP_002285123.1|1.5e-9667.39PREDICTED: yrdC domain-containing protein, mitochondrial isoform X1 [Vitis vinif... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006070YrdC-like_dom
IPR017945DHBP_synth_RibB-like_a/b_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003725double-stranded RNA binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006450 regulation of translational fidelity
biological_process GO:0002949 tRNA threonylcarbamoyladenosine modification
cellular_component GO:0005575 cellular_component
cellular_component GO:0005737 cytoplasm
molecular_function GO:0003725 double-stranded RNA binding
molecular_function GO:0016779 nucleotidyltransferase activity
molecular_function GO:0000049 tRNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G12530.1CSPI01G12530.1mRNA


Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006070YrdC-like domainPFAMPF01300Sua5_yciO_yrdCcoord: 82..259
score: 6.6
IPR006070YrdC-like domainTIGRFAMsTIGR00057TIGR00057coord: 75..266
score: 2.2
IPR006070YrdC-like domainPROFILEPS51163YRDCcoord: 73..261
score: 25
IPR017945DHBP synthase RibB-like alpha/beta domainGENE3DG3DSA:3.90.870.10coord: 76..268
score: 8.7
IPR017945DHBP synthase RibB-like alpha/beta domainunknownSSF55821YrdC/RibBcoord: 74..261
score: 8.85
NoneNo IPR availablePANTHERPTHR17490SUA5coord: 69..270
score: 4.6