MELO3C026847.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C026847.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	yrdC domain-containing protein, mitochondrial
Location	chr12 : 3454156 .. 3457958 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCGCCGGCCGTATCTCACATTTGCCCACTGCAATTTTTTTTGATTTCGAATCCTTCACAATCCCAAACCTAAGTTTCCAAACACCTCCTACTCTCTCTTCGAAACCCCGCTTTGGATTGCTACCGACCACCATGAACACACTTCCGGCGAAAATGGCTGACAGTCTCTCTCTAATCAGAACGTTTGCAACTTTTCCCTCTTCTCACCTGGGTTCGTTTCAATCTTCCATCCCCTTTATCTTTTTTGTATGTTTATTCTTGGATTGAAACATGAATTGACATAAATTATTACATTTTAGGTTCTTCCAATTATGGGATAGTTTCGTTCTTGCAACGAAATAGAGGATCAAGGGTTAGTTTTCTTAAAACGGATTGGAGTTTAGAGAAGTGTTGTATGCCTGTGGAGAATTGTTTGCAAGCACTTCGTCCTGCCTCTGAAGCTTTTGCTCAAGAGGCTACAGATGCCCTTAAAGCTGGGAAGGTTATTGCTGTCCCCACTGATACTCTCTATGGACTCGCTtGTGATGCTTGGTATGCTATTCCTATTATGGGTTTTTTTGTGCAATTCTCTTATTTTGTGAGTTTTGATTCTTTTTGGTGTGGAAGTCGAGGTTCCAACACCTTCTGTTTGTTCTTTTGTCGATGATGATAGTGCTTTATCAATAGTAGTACAATCTTTCTTAAGAGGGGAGATTGATATATCTGTGATCTTGTTTAGTACAAACAAAGTTCTTGGTGAGAGGTCTTGGTCAGGAGTGCATGTATCTCGCTCACTCCCTTGGTTGGGTATGGTGATCGTAGGGGATGTCACATGATTGTTAAAATTAAGAGACTCTTTTGAGTTGGCACTTGGCAGGTAGTCATCTAGGAGGAAGGTGGTGGGTGGTGATGAGGAACAGCACAGGGAGGTCATCTTATTTAGTTCTGTCACTGAGGATATCAAACCATGGTTAAGAAAGGCTTAAAAGAATTTATTGCTATTACCATAGCATCAAGGTGTGCCTTTCTTTTTGGTAGGTCAATCATAAGAAGTCCAAAGTTATACATGCTTAGTTGGGAGCAATTCTATATTGGGTGGCCTTCTAGAAATATTCCTAGAAAGCACGTGGGTGAGGACCAAACATGTTGAAAAGACTCGTGTTGCTTTGTGGAGACAATCTTCATTCTTAGAAGTAGTTTAAGACAAGTAGATAGTGTGACCAAGTCACAACAAAATGCCTGGGCTATCAAGTTCCAAATCCGAATTCCAAATTCTAGTCTGAATCTTGGGCTCGGGGCATTACATAAATCTCGTGAAAAAAAATATTGGGAGAGATATGGTTCGGGTTCCTTGTTTGGGCCTTATTTCTTTAGGATTTCTGTATTTATCTCTCTTATGCAAAACAACTGGGACTCTTTTTTGTTTAACATTTTTGTTAGGCTAATATTGTGGTAGGCTCTTATTCCTTTTTCTTTTTTTATTTTTTATATGGAGTATGTTTTCTTTCACTTGTATTAACGATAGCTTATGCTTAGTTTTCATCAAGAATAATAATAGAAAACAGACTTTTGTGTAAAATTTTATTCTTAAACTCCAACATCAATATTTATTTCCTGATCTATGCATAAGTCGGTCGACTGTTTATGAGAAGATAAAATCATTTTTTTTAAACCTCGAAGATGATAGTGAACGGTAACGTAAAGAACTTACGTTTATTTTATTGCCTATATATCTCTTAGTTGGCTCTTTCTTGTTCCAAAGTCCACCATTTTTCCTGTTTGATAGAATAATTGTTTTACTGCATGAATTCTAAGGTAAATACTGCATAGTGATACAATGTTGTAAAATTGAGAGATACTTCTGAAATACATAATTGTGTTGGAACATAATCGTTACGGGGCCCCATGGTCTTGATGATCTAAAAATGGTTATCAATTAGGCACAAATATTGATAAGTTTTTCAACTTTGTAAAAACACTCTTCTTTCATGTAATTATAGTATAATTATAGGAAGTATATTCTATAATGTTGTTAAACCATGAGATCTGTTTTTCCGGAATGGGGGTAACACATTCAAAGCGCATACGCAAAAAGTTGAACAAAATTAGAGAGGTGTTTTTTTCTTTTCTTTTCTTTTTGTGAAACTATATGATCAAAGCGACCATAAACTTAATCACGTTGCACTTTGCTTTTATTTAACTGTGGCCTCTGTGGGGATTGATTTTGCAGTTCTGCCGAAGCAGTCCATAGGATTTATGAAATTAAAGGACGTAAACTTACAAGCCCTCTCGCCATTTGTGTTGGTGGTGTCTCTGATATAACTCGCTATGCTATAACAGACCATTTGCCTTCTGGTTTGCTTGATTCTCTCCTTCCTGGGCCTGTGACTGTTGTTCTGAAAAGAGGTATGTATCAGAAATCTGCTTGATTATGCTAAGGTAGTTAATAGTGCATTAAAGGTTGAAAGTGGTTTTGAACAAGTAAAATTGAGGAGCATTGTTTGATTGAAATAAAGTAAATAGGTTAAAAAACACTTCTGATCCTTCAACTGAAGGAGCAATTGAATCGATAAACTTTAGATGGTTCAGGTACTTCAAATTTATACTAATCTAATCTCTACTTTGAAAAGTTCTGTCAAAAGCATCGACTTTTATAATGCAATGACTCAAAGTTTTTGTTTCTTATATACACCTATTGTTTCTAATTTGTTTATCAATCTACATTTGGAAGAAGTCTCATTAAATCTTTAACATATTTTTTCACGATAGGGTTTAAAGTCACTAAACTGTTACTTCCATGTAAGATAAGAGACTAAAAATGCCTTTTGTAACCAGGATAATGAGTTCTTGGGAAACTACTTTTATAGGTTGGGTATTCGACAACAGTTGGGTTGGTTATGAAAATCTTTCAGATATTCTGTTCTTCTCACATGATCCCATATCATTTCTTGGTGACTGTAACCTATAGTTACAAGTGAGACGCAGATAGGGCTGTGAGAGAGTTGTGAATTTTTGCGAGCTTACTTATTAATTTTTTCTCTCTCTTACCAAACTTTAGCAGAAAATTATTTTCTTCAAAGTAATTACAAATTCCCTTCTTGGAAACTAGTATTTCTCACCAATTATAAAAGTAAGATATTAATATTTCACTTCCCTTGTTTTGTTGAATTGTTCTGTATTATTTGAATAGTTGCCCCCTCCTCCATGTTACACCTGCATATCTGAGATTATGTTCATTTATATTTTAGTCTCCAAACTTCCCGTTGTCTGAGTTTTTACATTTTAGGTATTTTGCAGGTGAATCAAGTGTTCTTGACAAGTCTTTGAACCCTGGATTGGACAGTATAGGAGTCCGTGTACCTGATGCTGACTTTATTCGGCTGATTTCTCGTAGATCAGAGACAGCATTAGCTCTTACAAGTGCTAATTTAAGTGGACAACCAAGCAGTGTTTGTGTTAATGACTTTGAAAATCTATGGCAACACTGTGCTTATGTATACGATGGGGGTGTTCTTCCTGCTGGACGAGCAGGCTCGACGATCGTTGACCTCACTGAGCGAGGCACATTTAAGATTATAAGAGCTGGAAGGTACATTTCTTCTTGCGATTCTTCTATTTACCTTAAGAAGTGAAAATAGTGTCCTATTGCAATGACTTTGTCCTTTAATTCTGAAGTTGTGATTCAAAATATAGCAAAGCAGAAGCGATTATGTTTCATTGTGATGGTTTTCTCATGATGCTCATTATACCTTTGCAGCGCAGAGAAGCAGACTATTGCAACACTTCAAAGGTATTCACTATTAGAAGCAGCAGCTACTATTTGA

mRNA sequence

GGCGCCGGCCGTATCTCACATTTGCCCACTGCAATTTTTTTTGATTTCGAATCCTTCACAATCCCAAACCTAAGTTTCCAAACACCTCCTACTCTCTCTTCGAAACCCCGCTTTGGATTGCTACCGACCACCATGAACACACTTCCGGCGAAAATGGCTGACAGTCTCTCTCTAATCAGAACGTTTGCAACTTTTCCCTCTTCTCACCTGGGTTCTTCCAATTATGGGATAGTTTCGTTCTTGCAACGAAATAGAGGATCAAGGGTTAGTTTTCTTAAAACGGATTGGAGTTTAGAGAAGTGTTGTATGCCTGTGGAGAATTGTTTGCAAGCACTTCGTCCTGCCTCTGAAGCTTTTGCTCAAGAGGCTACAGATGCCCTTAAAGCTGGGAAGGTTATTGCTGTCCCCACTGATACTCTCTATGGACTCGCTtGTGATGCTTGTTCTGCCGAAGCAGTCCATAGGATTTATGAAATTAAAGGACGTAAACTTACAAGCCCTCTCGCCATTTGTGTTGGTGGTGTCTCTGATATAACTCGCTATGCTATAACAGACCATTTGCCTTCTGGTTTGCTTGATTCTCTCCTTCCTGGGCCTGTGACTGTTGTTCTGAAAAGAGGTGAATCAAGTGTTCTTGACAAGTCTTTGAACCCTGGATTGGACAGTATAGGAGTCCGTGTACCTGATGCTGACTTTATTCGGCTGATTTCTCGTAGATCAGAGACAGCATTAGCTCTTACAAGTGCTAATTTAAGTGGACAACCAAGCAGTGTTTGTGTTAATGACTTTGAAAATCTATGGCAACACTGTGCTTATGTATACGATGGGGGTGTTCTTCCTGCTGGACGAGCAGGCTCGACGATCGTTGACCTCACTGAGCGAGGCACATTTAAGATTATAAGAGCTGGAAGCGCAGAGAAGCAGACTATTGCAACACTTCAAAGGTATTCACTATTAGAAGCAGCAGCTACTATTTGA

Coding sequence (CDS)

GGCGCCGGCCGTATCTCACATTTGCCCACTGCAATTTTTTTTGATTTCGAATCCTTCACAATCCCAAACCTAAGTTTCCAAACACCTCCTACTCTCTCTTCGAAACCCCGCTTTGGATTGCTACCGACCACCATGAACACACTTCCGGCGAAAATGGCTGACAGTCTCTCTCTAATCAGAACGTTTGCAACTTTTCCCTCTTCTCACCTGGGTTCTTCCAATTATGGGATAGTTTCGTTCTTGCAACGAAATAGAGGATCAAGGGTTAGTTTTCTTAAAACGGATTGGAGTTTAGAGAAGTGTTGTATGCCTGTGGAGAATTGTTTGCAAGCACTTCGTCCTGCCTCTGAAGCTTTTGCTCAAGAGGCTACAGATGCCCTTAAAGCTGGGAAGGTTATTGCTGTCCCCACTGATACTCTCTATGGACTCGCTtGTGATGCTTGTTCTGCCGAAGCAGTCCATAGGATTTATGAAATTAAAGGACGTAAACTTACAAGCCCTCTCGCCATTTGTGTTGGTGGTGTCTCTGATATAACTCGCTATGCTATAACAGACCATTTGCCTTCTGGTTTGCTTGATTCTCTCCTTCCTGGGCCTGTGACTGTTGTTCTGAAAAGAGGTGAATCAAGTGTTCTTGACAAGTCTTTGAACCCTGGATTGGACAGTATAGGAGTCCGTGTACCTGATGCTGACTTTATTCGGCTGATTTCTCGTAGATCAGAGACAGCATTAGCTCTTACAAGTGCTAATTTAAGTGGACAACCAAGCAGTGTTTGTGTTAATGACTTTGAAAATCTATGGCAACACTGTGCTTATGTATACGATGGGGGTGTTCTTCCTGCTGGACGAGCAGGCTCGACGATCGTTGACCTCACTGAGCGAGGCACATTTAAGATTATAAGAGCTGGAAGCGCAGAGAAGCAGACTATTGCAACACTTCAAAGGTATTCACTATTAGAAGCAGCAGCTACTATTTGA

Protein sequence

GAGRISHLPTAIFFDFESFTIPNLSFQTPPTLSSKPRFGLLPTTMNTLPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMPVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAAATI

Homology

[Close]

BLAST of MELO3C026847.2 vs. NCBI nr
Match: XP_008465284.1 (PREDICTED: yrdC domain-containing protein, mitochondrial [Cucumis melo])

HSP 1 Score: 555.1 bits (1429), Expect = 1.6e-154
Identity = 281/281 (100.00%), Postives = 281/281 (100.00%), Query Frame = 0


Query: 45  MNTLPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMP 104
           MNTLPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMP
Sbjct: 1   MNTLPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMP 60

Query: 105 VENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKL 164
           VENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKL
Sbjct: 61  VENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKL 120

Query: 165 TSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIG 224
           TSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIG
Sbjct: 121 TSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIG 180

Query: 225 VRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRA 284
           VRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRA
Sbjct: 181 VRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRA 240

Query: 285 GSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAAATI 326
           GSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAAATI
Sbjct: 241 GSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAAATI 281

[Close]

BLAST of MELO3C026847.2 vs. NCBI nr
Match: XP_004148791.1 (PREDICTED: yrdC domain-containing protein, mitochondrial [Cucumis sativus] >KGN64719.1 hypothetical protein Csa_1G077210 [Cucumis sativus])

HSP 1 Score: 535.8 bits (1379), Expect = 1.0e-148
Identity = 270/281 (96.09%), Postives = 277/281 (98.58%), Query Frame = 0


Query: 45  MNTLPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMP 104
           MNTLPAKMADSLSLIRTF TFPSS LGSSNYGIVSFLQRNRGSRVSFLKT+WSLEKCCM 
Sbjct: 1   MNTLPAKMADSLSLIRTFTTFPSSQLGSSNYGIVSFLQRNRGSRVSFLKTNWSLEKCCMR 60

Query: 105 VENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKL 164
           VENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKL
Sbjct: 61  VENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKL 120

Query: 165 TSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIG 224
           TSPLAICVG VSDITR+A+TDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIG
Sbjct: 121 TSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIG 180

Query: 225 VRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRA 284
           VRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRA
Sbjct: 181 VRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRA 240

Query: 285 GSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAAATI 326
           GSTI+DLTE+GTFKIIRAGSAE+QTIATL+RYSLLEAAATI
Sbjct: 241 GSTIIDLTEQGTFKIIRAGSAEEQTIATLERYSLLEAAATI 281

[Close]

BLAST of MELO3C026847.2 vs. NCBI nr
Match: XP_023521571.1 (yrdC domain-containing protein, mitochondrial-like [Cucurbita pepo subsp. pepo] >XP_023523156.1 yrdC domain-containing protein, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 493.4 bits (1269), Expect = 5.8e-136
Identity = 247/283 (87.28%), Postives = 266/283 (93.99%), Query Frame = 0


Query: 40  LLPTTMNTLPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLE 99
           +LPTTMNTLPAKM + LSLIRTFATFPSS LG+ NYG VSFL  NRGSR++F KT WSLE
Sbjct: 1   MLPTTMNTLPAKMVEGLSLIRTFATFPSSQLGAPNYGFVSFLHHNRGSRLNFPKTVWSLE 60

Query: 100 KCCMPVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEI 159
           KC M VEN LQALRPASEAFAQEAT+ALKAGKVIAVPTDTLYGLACDACS+EAV+RIYEI
Sbjct: 61  KCSMRVENSLQALRPASEAFAQEATEALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEI 120

Query: 160 KGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPG 219
           KGRKLTSPLAICVG VSDITR+A+ DHLP GLLDSLLPGPVTVVLKRGESS+L+KSLNPG
Sbjct: 121 KGRKLTSPLAICVGDVSDITRFAVADHLPHGLLDSLLPGPVTVVLKRGESSILEKSLNPG 180

Query: 220 LDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL 279
           L+SIGVRVPDADFIRLISRRS TALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL
Sbjct: 181 LESIGVRVPDADFIRLISRRSGTALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL 240

Query: 280 PAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAA 323
           PAGRAGSTI+DLT+RGTFKIIRAGSA++QT+ATL+RYSLLE A
Sbjct: 241 PAGRAGSTIIDLTKRGTFKIIRAGSAKEQTVATLKRYSLLEDA 283

[Close]

BLAST of MELO3C026847.2 vs. NCBI nr
Match: XP_022998259.1 (yrdC domain-containing protein, mitochondrial [Cucurbita maxima])

HSP 1 Score: 489.2 bits (1258), Expect = 1.1e-134
Identity = 244/283 (86.22%), Postives = 264/283 (93.29%), Query Frame = 0


Query: 40  LLPTTMNTLPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLE 99
           +LPTTMNT PAKM + LSLIRTFATFPSS LG+ NYG VSFL  NRGSR++F KT WSLE
Sbjct: 1   MLPTTMNTFPAKMVEGLSLIRTFATFPSSQLGAPNYGFVSFLHHNRGSRLNFPKTAWSLE 60

Query: 100 KCCMPVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEI 159
           KC M VEN LQALRPASEAFAQEAT+ALKAGKVIAVPTDTLYGLACDACS+EAV+RIYEI
Sbjct: 61  KCSMRVENSLQALRPASEAFAQEATEALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEI 120

Query: 160 KGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPG 219
           KGRKLTSPLAICVG VSDITR+A+ DHLP GLLDSLLPGPVTVVLKRGESS+L+KSLNPG
Sbjct: 121 KGRKLTSPLAICVGDVSDITRFAVADHLPHGLLDSLLPGPVTVVLKRGESSILEKSLNPG 180

Query: 220 LDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL 279
           L+SIGVRVPDADFIRLISRRS TALALTSANLSG+PSSVCVNDFENLWQHCAYVYDGGVL
Sbjct: 181 LESIGVRVPDADFIRLISRRSGTALALTSANLSGRPSSVCVNDFENLWQHCAYVYDGGVL 240

Query: 280 PAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAA 323
           PAGRAGSTI+DLT+RG FKIIRAGSA++QT+ATL+RYSLLE A
Sbjct: 241 PAGRAGSTIIDLTKRGMFKIIRAGSAKEQTVATLERYSLLEEA 283

[Close]

BLAST of MELO3C026847.2 vs. NCBI nr
Match: XP_022948702.1 (yrdC domain-containing protein, mitochondrial [Cucurbita moschata])

HSP 1 Score: 486.9 bits (1252), Expect = 5.4e-134
Identity = 242/283 (85.51%), Postives = 265/283 (93.64%), Query Frame = 0


Query: 40  LLPTTMNTLPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLE 99
           +LPTTMNTLPAKM + LS+IRTFATFPSS LG+ +YG VSFL  NRGSR++F KT WSLE
Sbjct: 1   MLPTTMNTLPAKMVEGLSIIRTFATFPSSQLGAPSYGFVSFLHHNRGSRLNFPKTVWSLE 60

Query: 100 KCCMPVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEI 159
           KC M VEN LQALRPASEAFAQEA +ALKAGKVIAVPTDTLYGLACDACS+EAV+RIYEI
Sbjct: 61  KCSMRVENSLQALRPASEAFAQEAIEALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEI 120

Query: 160 KGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPG 219
           KGRKLTSPLAICVG VSDITR+A+ DHLP GLLDSLLPGPVTVVLKRGESS+L+KSLNPG
Sbjct: 121 KGRKLTSPLAICVGDVSDITRFAVADHLPHGLLDSLLPGPVTVVLKRGESSILEKSLNPG 180

Query: 220 LDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL 279
           L+SIGVRVPDADFIRLISRRS TALALTSANLSGQPSSVCV+DFENLWQHCAYVYDGG+L
Sbjct: 181 LESIGVRVPDADFIRLISRRSGTALALTSANLSGQPSSVCVHDFENLWQHCAYVYDGGIL 240

Query: 280 PAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAA 323
           PAGRAGSTI+DLT+RGTFKIIRAGSA++QT+ATL+RYSLLE A
Sbjct: 241 PAGRAGSTIIDLTKRGTFKIIRAGSAKEQTVATLERYSLLEEA 283

[Close]

BLAST of MELO3C026847.2 vs. TAIR10
Match: AT5G60590.2 (DHBP synthase RibB-like alpha/beta domain)

HSP 1 Score: 327.0 bits (837), Expect = 1.3e-89
Identity = 173/274 (63.14%), Postives = 207/274 (75.55%), Query Frame = 0


Query: 48  LPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSF-LKTDWSLEKC--CMP 107
           L  ++A+ L  I    + P    G S     S   ++R  R     K  WSLE+   C+ 
Sbjct: 3   LSTRLAEKLPGILPAPSSPLLRKGVSELRCFSIANQSRRLRWGLQKKMVWSLERAETCVV 62

Query: 108 VENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKL 167
            ++CL  + PA+EA+AQEA +A+K+ KVIAVPTDTLYG ACDACS EAV RIYEIKGRKL
Sbjct: 63  SKSCL--VHPATEAYAQEAIEAIKSEKVIAVPTDTLYGFACDACSLEAVSRIYEIKGRKL 122

Query: 168 TSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIG 227
           TSPLAICVG V DI R A T HLP GLLDSLLPGPVT+VL+RGESS+L+KSLNPG+ +IG
Sbjct: 123 TSPLAICVGDVLDIKRVATTSHLPHGLLDSLLPGPVTLVLQRGESSILEKSLNPGIGTIG 182

Query: 228 VRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRA 287
           VRVPD +FIR +SR S + LALTSANLSG  SSVCV DFENLWQHCAYVYDGG+LP+GRA
Sbjct: 183 VRVPDCEFIREVSRGSGSVLALTSANLSGDRSSVCVKDFENLWQHCAYVYDGGLLPSGRA 242

Query: 288 GSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSL 319
           GSTIVDLT+ G +KIIR GSA++ T+A L++Y L
Sbjct: 243 GSTIVDLTKVGKYKIIRPGSAKQATVAILEKYLL 274

[Close]

BLAST of MELO3C026847.2 vs. TAIR10
Match: AT3G01920.1 (DHBP synthase RibB-like alpha/beta domain)

HSP 1 Score: 63.5 bits (153), Expect = 2.7e-10
Identity = 63/210 (30.00%), Postives = 93/210 (44.29%), Query Frame = 0


Query: 121 QEATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITR 180
           Q   D LK G V  +PTDT+Y +ACD  +  AV R+  IK  + + PL+I    + DI  
Sbjct: 84  QPVIDLLKQGAVGVIPTDTVYAIACDCKNHSAVERLRRIKKIESSKPLSILCRSLRDIDT 143

Query: 181 YAITDHLPSG----------LLDSLLPGPVTVVLKR-----------GESSVLDKSLNPG 240
           +  T   P G           +   LPGP T +L             G +SV   S    
Sbjct: 144 F--TMGFPRGDGHGHANVFRAVKQCLPGPYTFILTASKELPKQCVGYGTTSVKYASRK-- 203

Query: 241 LDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLW-----QHCAYVY 300
             ++GVR+ D    + I ++ +  L  TS  + G   +  + D   +      +   +V 
Sbjct: 204 --NVGVRISDDALCQAILQQMDAPLICTS--VKGPKENEWMIDPTAIGDIYGPEGLDFVV 263

Query: 301 DGGVLPAGRAGSTIVDLTERGTF-KIIRAG 304
           DGG+  A    STIVD+T  G + K+IR G
Sbjct: 264 DGGIRVA--EPSTIVDMT--GPYPKVIREG 281

[Close]

BLAST of MELO3C026847.2 vs. Swiss-Prot
Match: sp|Q0VC80|YRDC_BOVIN (YrdC domain-containing protein, mitochondrial OS=Bos taurus OX=9913 GN=YRDC PE=2 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 5.0e-46
Identity = 100/202 (49.50%), Postives = 133/202 (65.84%), Query Frame = 0


Query: 123 ATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYA 182
           A   L+AG V+AVPTDTLYGLAC A  +EA+  +Y +KGR  T PLA+C+G V+D+ RY 
Sbjct: 71  AVAELRAGAVVAVPTDTLYGLACSASCSEALGAVYRVKGRSETKPLAVCLGRVADVYRYC 130

Query: 183 ITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSET 242
               +P GLL  LLPGPVT+V++R E   L+K LNP    +G+R+PD  F++ +++    
Sbjct: 131 HV-RVPEGLLKDLLPGPVTLVMERSEE--LNKDLNPFTPLVGIRIPDHAFMQDLAQMFGG 190

Query: 243 ALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL-----PAGRAGSTIVDLTERGTF 302
            LALTSANLS Q SS+ V +F++LW H + + DGG +     P  R GST+VDL+  G F
Sbjct: 191 PLALTSANLSSQSSSLNVEEFQDLWPHLSLIIDGGPIGDGQSPECRLGSTVVDLSVPGKF 250

Query: 303 KIIRAGSAEKQTIATLQRYSLL 320
            IIR G A + T A LQ Y LL
Sbjct: 251 GIIRPGCALESTSAILQEYGLL 269

[Close]

BLAST of MELO3C026847.2 vs. Swiss-Prot
Match: sp|Q86U90|YRDC_HUMAN (YrdC domain-containing protein, mitochondrial OS=Homo sapiens OX=9606 GN=YRDC PE=1 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.1e-44
Identity = 104/231 (45.02%), Postives = 143/231 (61.90%), Query Frame = 0


Query: 103 MPVENCLQALRPASEAFAQ---EATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEI 162
           +P    +QA  P    + +    A   L+AG V+AVPTDTLYGLAC A  + A+  +Y +
Sbjct: 50  LPGSGAVQAASPERAGWTEALRAAVAELRAGAVVAVPTDTLYGLACAASCSAALRAVYRL 109

Query: 163 KGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPG 222
           KGR    PLA+C+G V+D+ RY     +P GLL  LLPGPVT+V++R E   L+K LNP 
Sbjct: 110 KGRSEAKPLAVCLGRVADVYRYCRV-RVPEGLLKDLLPGPVTLVMERSEE--LNKDLNPF 169

Query: 223 LDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL 282
              +G+R+PD  F++ +++  E  LALTSANLS Q SS+ V +F++LW   + V DGG +
Sbjct: 170 TPLVGIRIPDHAFMQDLAQMFEGPLALTSANLSSQASSLNVEEFQDLWPQLSLVIDGGQI 229

Query: 283 -----PAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATL-QRYSLLEAAAT 325
                P  R GST+VDL+  G F IIR G A + T A L Q+Y LL + A+
Sbjct: 230 GDGQSPECRLGSTVVDLSVPGKFGIIRPGCALESTTAILQQKYGLLPSHAS 277

[Close]

BLAST of MELO3C026847.2 vs. Swiss-Prot
Match: sp|Q499R4|YRDC_RAT (YrdC domain-containing protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Yrdc PE=2 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 3.0e-43
Identity = 100/226 (44.25%), Postives = 139/226 (61.50%), Query Frame = 0


Query: 103 MPVENCLQALRPASEAFAQ---EATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEI 162
           +P    ++A  P    + +    A   L+AG V+AVPTDTLYGLAC A  + A+  +Y +
Sbjct: 51  LPESEAVEAASPERSGWTEALRAAVAELRAGAVVAVPTDTLYGLACSASCSAALSCVYRL 110

Query: 163 KGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPG 222
           KGR    PLA+C+G V+D+ RY     +P  LL+ L PGPVT+V++R E   L+K LNP 
Sbjct: 111 KGRSEAKPLAVCLGRVADVYRYCQV-RVPRELLEDLFPGPVTLVMERSEE--LNKDLNPF 170

Query: 223 LDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL 282
              +G+R+PD  F+  +++     LALTSANLS Q SS+ V +F++LW H + V DGG +
Sbjct: 171 TPLVGIRIPDHAFMLDLAQMFGGPLALTSANLSSQASSLSVEEFQDLWPHLSLVIDGGPI 230

Query: 283 -----PAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQ-RYSLL 320
                P  R GST+VDL+  G F IIR+G A + T A LQ +Y LL
Sbjct: 231 GDSESPECRLGSTVVDLSVPGKFGIIRSGCALENTTAILQGKYGLL 273

[Close]

BLAST of MELO3C026847.2 vs. Swiss-Prot
Match: sp|Q3U5F4|YRDC_MOUSE (YrdC domain-containing protein, mitochondrial OS=Mus musculus OX=10090 GN=Yrdc PE=1 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.9e-42
Identity = 97/203 (47.78%), Postives = 131/203 (64.53%), Query Frame = 0


Query: 123 ATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYA 182
           A   L+AG V+AVPTDTLYGLAC A S+ A+  +Y +KGR    PLA+C+G V+D+ RY 
Sbjct: 74  AVAELRAGAVVAVPTDTLYGLACSASSSAALSCVYRLKGRSEAKPLAVCLGRVADVYRYC 133

Query: 183 ITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSET 242
               +P  LL+ L PGPVT+V++R E   L+K LNP    +G+R+PD  F+  +++    
Sbjct: 134 QV-RVPRELLEDLFPGPVTLVMERSEE--LNKDLNPFTRLVGIRIPDHAFMLDLAQMFGG 193

Query: 243 ALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL-----PAGRAGSTIVDLTERGTF 302
            LALTSANLS Q SS+ V +F++LW H + V DGG +     P  R GST+VDL+  G F
Sbjct: 194 PLALTSANLSSQASSLSVEEFQDLWPHLSLVIDGGPIGDSQSPECRLGSTVVDLSVPGKF 253

Query: 303 KIIRAGSAEKQTIATL-QRYSLL 320
            IIR G A + T + L Q+Y LL
Sbjct: 254 GIIRPGCALENTTSILQQKYGLL 273

[Close]

BLAST of MELO3C026847.2 vs. Swiss-Prot
Match: sp|Q60369|TSAC_METJA (Putative threonylcarbamoyl-AMP synthase OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ0062 PE=3 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 7.2e-21
Identity = 59/167 (35.33%), Postives = 96/167 (57.49%), Query Frame = 0


Query: 130 GKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPS 189
           GK++   TDTLYG++ +A + +AV ++Y IK R+   PL+ICV   ++I +YA  + L  
Sbjct: 32  GKIVICGTDTLYGISANALNEKAVRKVYNIKRREFNKPLSICVRDKNEIEKYAYVNDLAK 91

Query: 190 GLLDSLLPGPVTVVLKR--GESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETALALT 249
            ++D  LPGP+T++LK+  G   ++ K      D IG+R+PD   IR +   S   L  T
Sbjct: 92  KIIDKFLPGPLTIILKKKPGIPDIVAK------DYIGIRIPDEPIIREL---SIVPLTTT 151

Query: 250 SANLSGQPSSVCVNDFE-NLWQHCAYVYDGGVLPAGRAGSTIVDLTE 294
           SAN+SG+ S   V++ +  + +   YV D G     +  STI+ + +
Sbjct: 152 SANISGKESPTTVDEIDKEVLKKVDYVIDIGKCKYSKP-STIIKIED 188

[Close]

BLAST of MELO3C026847.2 vs. TrEMBL
Match: tr|A0A1S3CNI2|A0A1S3CNI2_CUCME (yrdC domain-containing protein, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103502936 PE=4 SV=1)

HSP 1 Score: 555.1 bits (1429), Expect = 1.1e-154
Identity = 281/281 (100.00%), Postives = 281/281 (100.00%), Query Frame = 0


Query: 45  MNTLPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMP 104
           MNTLPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMP
Sbjct: 1   MNTLPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMP 60

Query: 105 VENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKL 164
           VENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKL
Sbjct: 61  VENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKL 120

Query: 165 TSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIG 224
           TSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIG
Sbjct: 121 TSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIG 180

Query: 225 VRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRA 284
           VRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRA
Sbjct: 181 VRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRA 240

Query: 285 GSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAAATI 326
           GSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAAATI
Sbjct: 241 GSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAAATI 281

[Close]

BLAST of MELO3C026847.2 vs. TrEMBL
Match: tr|A0A0A0LUP4|A0A0A0LUP4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G077210 PE=4 SV=1)

HSP 1 Score: 535.8 bits (1379), Expect = 6.7e-149
Identity = 270/281 (96.09%), Postives = 277/281 (98.58%), Query Frame = 0


Query: 45  MNTLPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMP 104
           MNTLPAKMADSLSLIRTF TFPSS LGSSNYGIVSFLQRNRGSRVSFLKT+WSLEKCCM 
Sbjct: 1   MNTLPAKMADSLSLIRTFTTFPSSQLGSSNYGIVSFLQRNRGSRVSFLKTNWSLEKCCMR 60

Query: 105 VENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKL 164
           VENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKL
Sbjct: 61  VENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKL 120

Query: 165 TSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIG 224
           TSPLAICVG VSDITR+A+TDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIG
Sbjct: 121 TSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIG 180

Query: 225 VRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRA 284
           VRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRA
Sbjct: 181 VRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRA 240

Query: 285 GSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAAATI 326
           GSTI+DLTE+GTFKIIRAGSAE+QTIATL+RYSLLEAAATI
Sbjct: 241 GSTIIDLTEQGTFKIIRAGSAEEQTIATLERYSLLEAAATI 281

[Close]

BLAST of MELO3C026847.2 vs. TrEMBL
Match: tr|A0A061GWW4|A0A061GWW4_THECC (DHBP synthase RibB-like alpha/beta domain isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_042043 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 3.3e-95
Identity = 181/255 (70.98%), Postives = 215/255 (84.31%), Query Frame = 0


Query: 71  GSSNYGIVSFLQRNRGSRVSFLKTDWS-LEKCCMPVENCLQALRPASEAFAQEATDALKA 130
           G    G V FLQ+ R  R  F K   S +E+C + VE+ L  + PA++ +A EA  ALKA
Sbjct: 72  GVPKLGFVPFLQQKRRFRGGFSKKMGSNVERCEVGVESKLGLVHPATKFYADEAVIALKA 131

Query: 131 GKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPS 190
           GKVIAVPTDTLYG ACDACS+EAV++IYEIKGRK TSPLAICVG V DI R+A+TDHLP 
Sbjct: 132 GKVIAVPTDTLYGFACDACSSEAVNKIYEIKGRKHTSPLAICVGDVPDIKRFAVTDHLPY 191

Query: 191 GLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSA 250
           GLLDSLLPGPVTVVL RGESS+L+KSLNPGLDSIGVRVPD+DFIR+I+R +E+ALALTSA
Sbjct: 192 GLLDSLLPGPVTVVLGRGESSLLEKSLNPGLDSIGVRVPDSDFIRIIARDAESALALTSA 251

Query: 251 NLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQT 310
           NLSGQPSSV +NDFENLW+HCAYVYDGGVLPAGRAGST+VDLT+ G +KI+R GSA+++T
Sbjct: 252 NLSGQPSSVSINDFENLWEHCAYVYDGGVLPAGRAGSTVVDLTKPGKYKILRPGSAKEET 311

Query: 311 IATLQRYSLLEAAAT 325
           +A L++YSLLE AA+
Sbjct: 312 VAILEKYSLLEEAAS 326

[Close]

BLAST of MELO3C026847.2 vs. TrEMBL
Match: tr|A0A061GXZ3|A0A061GXZ3_THECC (DHBP synthase RibB-like alpha/beta domain isoform 2 (Fragment) OS=Theobroma cacao OX=3641 GN=TCM_042043 PE=4 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 4.3e-95
Identity = 180/250 (72.00%), Postives = 214/250 (85.60%), Query Frame = 0


Query: 76  GIVSFLQRNRGSRVSFLKTDWS-LEKCCMPVENCLQALRPASEAFAQEATDALKAGKVIA 135
           G V FLQ+ R  R  F K   S +E+C + VE+ L  + PA++ +A EA  ALKAGKVIA
Sbjct: 27  GFVPFLQQKRRFRGGFSKKMGSNVERCEVGVESKLGLVHPATKFYADEAVIALKAGKVIA 86

Query: 136 VPTDTLYGLACDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDS 195
           VPTDTLYG ACDACS+EAV++IYEIKGRK TSPLAICVG V DI R+A+TDHLP GLLDS
Sbjct: 87  VPTDTLYGFACDACSSEAVNKIYEIKGRKHTSPLAICVGDVPDIKRFAVTDHLPYGLLDS 146

Query: 196 LLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSGQ 255
           LLPGPVTVVL RGESS+L+KSLNPGLDSIGVRVPD+DFIR+I+R +E+ALALTSANLSGQ
Sbjct: 147 LLPGPVTVVLGRGESSLLEKSLNPGLDSIGVRVPDSDFIRIIARDAESALALTSANLSGQ 206

Query: 256 PSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQ 315
           PSSV +NDFENLW+HCAYVYDGGVLPAGRAGST+VDLT+ G +KI+R GSA+++T+A L+
Sbjct: 207 PSSVSINDFENLWEHCAYVYDGGVLPAGRAGSTVVDLTKPGKYKILRPGSAKEETVAILE 266

Query: 316 RYSLLEAAAT 325
           +YSLLE AA+
Sbjct: 267 KYSLLEEAAS 276

[Close]

BLAST of MELO3C026847.2 vs. TrEMBL
Match: tr|D7SKX9|D7SKX9_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_06s0004g02920 PE=4 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 1.2e-94
Identity = 184/276 (66.67%), Postives = 223/276 (80.80%), Query Frame = 0


Query: 48  LPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMPVEN 107
           +PAK A+  SL+ TF + P   LG + +G V  L++NR  RVSF K      K    + +
Sbjct: 3   IPAKFAER-SLLLTFRS-PLRALGVAKFGFVQILKQNRRFRVSFPK------KMEAVMGS 62

Query: 108 CLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKLTSP 167
            L  +RPA++A A+EA +A+KAGKVIAVPTDTLYG ACDACS+EAV+RIYEIKGRK TSP
Sbjct: 63  ELGVVRPATDAHAEEAIEAIKAGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSP 122

Query: 168 LAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRV 227
           LAICVG V DI R+A+TDHLP GLL SLLPGPVTVVL+RGE S+++KSLNPGLDSIGVRV
Sbjct: 123 LAICVGDVLDIQRFAVTDHLPDGLLGSLLPGPVTVVLRRGELSIIEKSLNPGLDSIGVRV 182

Query: 228 PDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGST 287
           PD DFIR+I+  SETALALTSANLSGQPSSVC+ DFENLW+HCAYVYDGGVLP+GRAGST
Sbjct: 183 PDCDFIRVIAHGSETALALTSANLSGQPSSVCIKDFENLWEHCAYVYDGGVLPSGRAGST 242

Query: 288 IVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAAA 324
           +VDL+  G +KI+R GSA ++T+A L+R+SL+  AA
Sbjct: 243 VVDLSRLGKYKILRPGSAMEETVAILERHSLMPEAA 270

The following BLAST results are available for this feature:

BLAST of MELO3C026847.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008465284.1	1.6e-154	100.00	PREDICTED: yrdC domain-containing protein, mitochondrial [Cucumis melo]	[more]
XP_004148791.1	1.0e-148	96.09	PREDICTED: yrdC domain-containing protein, mitochondrial [Cucumis sativus] >KGN6...	[more]
XP_023521571.1	5.8e-136	87.28	yrdC domain-containing protein, mitochondrial-like [Cucurbita pepo subsp. pepo] ...	[more]
XP_022998259.1	1.1e-134	86.22	yrdC domain-containing protein, mitochondrial [Cucurbita maxima]	[more]
XP_022948702.1	5.4e-134	85.51	yrdC domain-containing protein, mitochondrial [Cucurbita moschata]	[more]

BLAST of MELO3C026847.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G60590.2	1.3e-89	63.14	DHBP synthase RibB-like alpha/beta domain	[more]
AT3G01920.1	2.7e-10	30.00	DHBP synthase RibB-like alpha/beta domain	[more]

BLAST of MELO3C026847.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q0VC80\|YRDC_BOVIN	5.0e-46	49.50	YrdC domain-containing protein, mitochondrial OS=Bos taurus OX=9913 GN=YRDC PE=2...	[more]
sp\|Q86U90\|YRDC_HUMAN	2.1e-44	45.02	YrdC domain-containing protein, mitochondrial OS=Homo sapiens OX=9606 GN=YRDC PE...	[more]
sp\|Q499R4\|YRDC_RAT	3.0e-43	44.25	YrdC domain-containing protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Y...	[more]
sp\|Q3U5F4\|YRDC_MOUSE	1.9e-42	47.78	YrdC domain-containing protein, mitochondrial OS=Mus musculus OX=10090 GN=Yrdc P...	[more]
sp\|Q60369\|TSAC_METJA	7.2e-21	35.33	Putative threonylcarbamoyl-AMP synthase OS=Methanocaldococcus jannaschii (strain...	[more]

BLAST of MELO3C026847.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CNI2\|A0A1S3CNI2_CUCME	1.1e-154	100.00	yrdC domain-containing protein, mitochondrial OS=Cucumis melo OX=3656 GN=LOC1035...	[more]
tr\|A0A0A0LUP4\|A0A0A0LUP4_CUCSA	6.7e-149	96.09	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G077210 PE=4 SV=1	[more]
tr\|A0A061GWW4\|A0A061GWW4_THECC	3.3e-95	70.98	DHBP synthase RibB-like alpha/beta domain isoform 1 OS=Theobroma cacao OX=3641 G...	[more]
tr\|A0A061GXZ3\|A0A061GXZ3_THECC	4.3e-95	72.00	DHBP synthase RibB-like alpha/beta domain isoform 2 (Fragment) OS=Theobroma caca...	[more]
tr\|D7SKX9\|D7SKX9_VITVI	1.2e-94	66.67	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_06s0004g02920 PE=4 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003725	double-stranded RNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR017945	DHBP_synth_RibB-like_a/b_dom
IPR006070	YrdC-like_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006450	regulation of translational fidelity
biological_process	GO:0002949	tRNA threonylcarbamoyladenosine modification
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0003725	double-stranded RNA binding
molecular_function	GO:0016779	nucleotidyltransferase activity
molecular_function	GO:0000049	tRNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C026847.2.1	MELO3C026847.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006070	YrdC-like domain	PFAM	PF01300	Sua5_yciO_yrdC	coord: 126..303 e-value: 2.5E-46 score: 157.3
IPR006070	YrdC-like domain	TIGRFAM	TIGR00057	TIGR00057	coord: 119..310 e-value: 3.8E-42 score: 141.8
IPR006070	YrdC-like domain	PROSITE	PS51163	YRDC	coord: 117..305 score: 25.563
None	No IPR available	GENE3D	G3DSA:3.90.870.10		coord: 110..315 e-value: 1.4E-54 score: 186.2
None	No IPR available	PANTHER	PTHR17490	SUA5	coord: 105..317
None	No IPR available	PANTHER	PTHR17490:SF10	YRDC DOMAIN-CONTAINING PROTEIN, MITOCHONDRIAL	coord: 105..317
IPR017945	DHBP synthase RibB-like alpha/beta domain superfamily	SUPERFAMILY	SSF55821	YrdC/RibB	coord: 118..310

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C026847.2	Csa1G077210	Cucumber (Chinese Long) v2	cumedB010
MELO3C026847.2	CSPI01G12530	Wild cucumber (PI 183967)	cpimedB011
MELO3C026847.2	Cucsa.127080	Cucumber (Gy14) v1	cgymedB196
MELO3C026847.2	CmaCh01G005550	Cucurbita maxima (Rimu)	cmamedB451
MELO3C026847.2	CmoCh01G005820	Cucurbita moschata (Rifu)	cmomedB439
MELO3C026847.2	Cp4.1LG02g13010	Cucurbita pepo (Zucchini)	cpemedB581
MELO3C026847.2	CsGy1G012560	Cucumber (Gy14) v2	cgybmedB009
MELO3C026847.2	Cla008297	Watermelon (97103) v1	medwmB143
MELO3C026847.2	ClCG03G002070	Watermelon (Charleston Gray)	medwcgB141
MELO3C026847.2	Cla97C03G053070	Watermelon (97103) v2	medwmbB142
MELO3C026847.2	Bhi08G000299	Wax gourd	medwgoB170
MELO3C026847.2	Carg12328	Silver-seed gourd	carmedB0451
MELO3C026847.2	CsaV3_1G012730	Cucumber (Chinese Long) v3	cucmedB009

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C026847.2	Cucurbita maxima (Rimu)	cmamedB215
MELO3C026847.2	Cucurbita moschata (Rifu)	cmomedB203
MELO3C026847.2	Cucurbita pepo (Zucchini)	cpemedB561
MELO3C026847.2	Bottle gourd (USVL1VR-Ls)	lsimedB183
MELO3C026847.2	Silver-seed gourd	carmedB0734