MELO3C026847 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C026847
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Threonylcarbamoyl-AMP synthase
Location	chr12 : 3453205 .. 3457010 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCGCCGGCCGTATCTCACATTTGCCCACTGCAATTTTTTTTGATTTCGAATCCTTCACAATCCCAAACCTAAGTTTCCAAACACCTCCTACTCTCTCTTCGAAACCCCGCTTTGGATTGCTACCGACCACCATGAACACACTTCCGGCGAAAATGGCTGACAGTCTCTCTCTAATCAGAACGTTTGCAACTTTTCCCTCTTCTCACCTGGGTTCGTTTCAATCTTCCATCCCCTTTATCTTTTTTGTATGTTTATTCTTGGATTGAAACATGAATTGACATAAATTATTACATTTTAGGTTCTTCCAATTATGGGATAGTTTCGTTCTTGCAACGAAATAGAGGATCAAGGGTTAGTTTTCTTAAAACGGATTGGAGTTTAGAGAAGTGTTGTATGCCTGTGGAGAATTGTTTGCAAGCACTTCGTCCTGCCTCTGAAGCTTTTGCTCAAGAGGCTACAGATGCCCTTAAAGCTGGGAAGGTTATTGCTGTCCCCACTGATACTCTCTATGGACTCGCTTGTGATGCTTGGTATGCTATTCCTATTATGGGTTTTTTTGTGCAATTCTCTTATTTTGTGAGTTTTGATTCTTTTTGGTGTGGAAGTCGAGGTTCCAACACCTTCTGTTTGTTCTTTTGTCGATGATGATAGTGCTTTATCAATAGTAGTACAATCTTTCTTAAGAGGGGAGATTGATATATCTGTGATCTTGTTTAGTACAAACAAAGTTCTTGGTGAGAGGTCTTGGTCAGGAGTGCATGTATCTCGCTCACTCCCTTGGTTGGGTATGGTGATCGTAGGGGATGTCACATGATTGTTAAAATTAAGAGACTCTTTTGAGTTGGCACTTGGCAGGTAGTCATCTAGGAGGAAGGTGGTGGGTGGTGATGAGGAACAGCACAGGGAGGTCATCTTATTTAGTTCTGTCACTGAGGATATCAAACCATGGTTAAGAAAGGCTTAAAAGAATTTATTGCTATTACCATAGCATCAAGGTGTGCCTTTCTTTTTGGTAGGTCAATCATAAGAAGTCCAAAGTTATACATGCTTAGTTGGGAGCAATTCTATATTGGGTGGCCTTCTAGAAATATTCCTAGAAAGCACGTGGGTGAGGACCAAACATGTTGAAAAGACTCGTGTTGCTTTGTGGAGACAATCTTCATTCTTAGAAGTAGTTTAAGACAAGTAGATAGTGTGACCAAGTCACAACAAAATGCCTGGGCTATCAAGTTCCAAATCCGAATTCCAAATTCTAGTCTGAATCTTGGGCTCGGGGCATTACATAAATCTCGTGAAAAAAAATATTGGGAGAGATATGGTTCGGGTTCCTTGTTTGGGCCTTATTTCTTTAGGATTTCTGTATTTATCTCTCTTATGCAAAACAACTGGGACTCTTTTTTGTTTAACATTTTTGTTAGGCTAATATTGTGGTAGGCTCTTATTCCTTTTTCTTTTTTATTTTTTTATATGGAGTATGTTTTCTTTCACTTGTATTAACGATAGCTTATGCTTAGTTTTCATCAAGAATAATAATAGAAAACAGACTTTTGTGTAAAATTTTATTCTTAAACTCCAACATCAATATTTATTTCCTGATCTATGCATAAGTCGGTCGACTGTTTATGAGAAGATAAAATCATTTTTTTTTTTAAACCTCGAAGATGATAGTGAACGGTAACGTAAAGAACTTACGTTTATTTTATTGCCTATATATCTCTTAGTTGGCTCTTTCTTGTTCCAAAGTCCACCATTTTTCCTGTTTGATAGAATAATTGTTTTACTGCATGAATTCTAAGGTAAATACTGCATAGTGATACAATGTTGTAAAATTGAGAGATACTTCTGAAATACATAATTGTGTTGGAACATAATCGTTACGGGGCCCCATGGTCTTGATGATCTAAAAATGGTTATCAATTAGGCACAAATATTGATAAGTTTTTCAACTTTGTAAAAACACTCTTCTTTCATGTAATTATAGTATAATTATAGGAAGTATATTCTATAATGTTGTTAAACCATGAGATCTGTTTTTCCGGAATGGGGGTAACACATTCAAAGCGCATACGCAAAAAGTTGAACAAAATTAGAGAGGTGTTTTTTTCTTTTCTTTTCTTTTTGTGAAACTATATGATCAAAGCGACCATAAACTTAATCACGTTGCACTTTGCTTTTATTTAACTGTGGCCTCTGTGGGGATTGATTTTGCAGTTCTGCCGAAGCAGTCCATAGGATTTATGAAATTAAAGGACGTAAACTTACAAGCCCTCTCGCCATTTGTGTTGGTGGTGTCTCTGATATAACTCGCTATGCTATAACAGACCATTTGCCTTCTGGTTTGCTTGATTCTCTCCTTCCTGGGCCTGTGACTGTTGTTCTGAAAAGAGGTATGTATCAGAAATCTGCTTGATTATGCTAAGGTAGTTAATAGTGCATTAAAGGTTGAAAGTGGTTTTGAACAAGTAAAATTGAGGAGCATTGTTTGATTGAAATAAAGTAAATAGGTTAAAAAACACTTCTGATCCTTCAACTGAAGGAGCAATTGAATCGATAAACTTTAGATGGTTCAGGTACTTCAAATTTATACTAATCTAATCTCTACTTTGAAAAGTTCTGTCAAAAGCATCGACTTTTATAATGCAATGACTCAAAGTTTTTGTTTCTTATATACACCTATTGTTTCTAATTTGTTTATCAATCTACATTTGGAAGAAGTCTCATTAAATCTTTAACATATTTTTTCACGATAGGGTTTAAAGTCACTAAACTGTTACTTCCATGTAAGATAAGAGACTAAAAATGCCTTTTGTAACCAGGATAATGAGTTCTTGGGAAACTACTTTTATAGGTTGGGTATTCGACAACAGTTGGGTTGGTTATGAAAATCTTTCAGATATTCTGTTCTTCTCACATGATCCCATATCATTTCTTGGTGACTGTAACCTATAGTTACAAGTGAGACGCAGATAGGGCTGTGAGAGAGTTGTGAATTTTTGCGAGCTTACTTATTAATTTTTTCTCTCTCTTACCAAACTTTAGCAGAAAATTATTTTCTTCAAAGTAATTACAAATTCCCTTCTTGGAAACTAGTATTTCTCACCAATTATAAAAGTAAGATATTAATATTTCACTTCCCTTGTTTTGTTGAATTGTTCTGTATTATTTGAATAGTTGCCCCCTCCTCCATGTTACACCTGCATATCTGAGATTATGTTCATTTATATTTTAGTCTCCAAACTTCCCGTTGTCTGAGTTTTTACATTTTAGGTATTTTGCAGGTGAATCAAGTGTTCTTGACAAGTCTTTGAACCCTGGATTGGACAGTATAGGAGTCCGTGTACCTGATGCTGACTTTATTCGGCTGATTTCTCGTAGATCAGAGACAGCATTAGCTCTTACAAGTGCTAATTTAAGTGGACAACCAAGCAGTGTTTGTGTTAATGACTTTGAAAATCTATGGCAACACTGTGCTTATGTATACGATGGGGGTGTTCTTCCTGCTGGACGAGCAGGCTCGACGATCGTTGACCTCACTGAGCGAGGCACATTTAAGATTATAAGAGCTGGAAGGTACATTTCTTCTTGCGATTCTTCTATTTACCTTAAGAAGTGAAAATAGTGTCCTATTGCAATGACTTTGTCCTTTAATTCTGAAGTTGTGATTCAAAATATAGCAAAGCAGAAGCGATTATGTTTCATTGTGATGGTTTTCTCATGATGCTCATTATACCTTTGCAGCGCAGAGAAGCAGACTATTGCAACACTTCAAAGGTATTCACTATTAGAAGCAGCAGCTACTATTTGA

mRNA sequence

GGCGCCGGCCGTATCTCACATTTGCCCACTGCAATTTTTTTTGATTTCGAATCCTTCACAATCCCAAACCTAAGTTTCCAAACACCTCCTACTCTCTCTTCGAAACCCCGCTTTGGATTGCTACCGACCACCATGAACACACTTCCGGCGAAAATGGCTGACAGTCTCTCTCTAATCAGAACGTTTGCAACTTTTCCCTCTTCTCACCTGGGTTCTTCCAATTATGGGATAGTTTCGTTCTTGCAACGAAATAGAGGATCAAGGGTTAGTTTTCTTAAAACGGATTGGAGTTTAGAGAAGTGTTGTATGCCTGTGGAGAATTGTTTGCAAGCACTTCGTCCTGCCTCTGAAGCTTTTGCTCAAGAGGCTACAGATGCCCTTAAAGCTGGGAAGGTTATTGCTGTCCCCACTGATACTCTCTATGGACTCGCTTGTGATGCTTGTTCTGCCGAAGCAGTCCATAGGATTTATGAAATTAAAGGACGTAAACTTACAAGCCCTCTCGCCATTTGTGTTGGTGGTGTCTCTGATATAACTCGCTATGCTATAACAGACCATTTGCCTTCTGGTTTGCTTGATTCTCTCCTTCCTGGGCCTGTGACTGTTGTTCTGAAAAGAGGTGAATCAAGTGTTCTTGACAAGTCTTTGAACCCTGGATTGGACAGTATAGGAGTCCGTGTACCTGATGCTGACTTTATTCGGCTGATTTCTCGTAGATCAGAGACAGCATTAGCTCTTACAAGTGCTAATTTAAGTGGACAACCAAGCAGTGTTTGTGTTAATGACTTTGAAAATCTATGGCAACACTGTGCTTATGTATACGATGGGGGTGTTCTTCCTGCTGGACGAGCAGGCTCGACGATCGTTGACCTCACTGAGCGAGGCACATTTAAGATTATAAGAGCTGGAAGCGCAGAGAAGCAGACTATTGCAACACTTCAAAGGTATTCACTATTAGAAGCAGCAGCTACTATTTGA

Coding sequence (CDS)

ATGAACACACTTCCGGCGAAAATGGCTGACAGTCTCTCTCTAATCAGAACGTTTGCAACTTTTCCCTCTTCTCACCTGGGTTCTTCCAATTATGGGATAGTTTCGTTCTTGCAACGAAATAGAGGATCAAGGGTTAGTTTTCTTAAAACGGATTGGAGTTTAGAGAAGTGTTGTATGCCTGTGGAGAATTGTTTGCAAGCACTTCGTCCTGCCTCTGAAGCTTTTGCTCAAGAGGCTACAGATGCCCTTAAAGCTGGGAAGGTTATTGCTGTCCCCACTGATACTCTCTATGGACTCGCTTGTGATGCTTGTTCTGCCGAAGCAGTCCATAGGATTTATGAAATTAAAGGACGTAAACTTACAAGCCCTCTCGCCATTTGTGTTGGTGGTGTCTCTGATATAACTCGCTATGCTATAACAGACCATTTGCCTTCTGGTTTGCTTGATTCTCTCCTTCCTGGGCCTGTGACTGTTGTTCTGAAAAGAGGTGAATCAAGTGTTCTTGACAAGTCTTTGAACCCTGGATTGGACAGTATAGGAGTCCGTGTACCTGATGCTGACTTTATTCGGCTGATTTCTCGTAGATCAGAGACAGCATTAGCTCTTACAAGTGCTAATTTAAGTGGACAACCAAGCAGTGTTTGTGTTAATGACTTTGAAAATCTATGGCAACACTGTGCTTATGTATACGATGGGGGTGTTCTTCCTGCTGGACGAGCAGGCTCGACGATCGTTGACCTCACTGAGCGAGGCACATTTAAGATTATAAGAGCTGGAAGCGCAGAGAAGCAGACTATTGCAACACTTCAAAGGTATTCACTATTAGAAGCAGCAGCTACTATTTGA

Protein sequence

MNTLPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMPVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAAATI*

Homology

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BLAST of MELO3C026847 vs. Swiss-Prot
Match: YRDC_BOVIN (YrdC domain-containing protein, mitochondrial OS=Bos taurus GN=YRDC PE=2 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 2.7e-45
Identity = 100/202 (49.50%), Postives = 131/202 (64.85%), Query Frame = 1


Query: 79  ATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYA 138
           A   L+AG V+AVPTDTLYGLAC A  +EA+  +Y +KGR  T PLA+C+G V+D+ RY 
Sbjct: 71  AVAELRAGAVVAVPTDTLYGLACSASCSEALGAVYRVKGRSETKPLAVCLGRVADVYRYC 130

Query: 139 ITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSET 198
               +P GLL  LLPGPVT+V++R E   L+K LNP    +G+R+PD  F++ +++    
Sbjct: 131 HV-RVPEGLLKDLLPGPVTLVMERSEE--LNKDLNPFTPLVGIRIPDHAFMQDLAQMFGG 190

Query: 199 ALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL-----PAGRAGSTIVDLTERGTF 258
            LALTSANLS Q SS+ V +F++LW H + + DGG +     P  R GST+VDL+  G F
Sbjct: 191 PLALTSANLSSQSSSLNVEEFQDLWPHLSLIIDGGPIGDGQSPECRLGSTVVDLSVPGKF 250

Query: 259 KIIRAGSAEKQTIATLQRYSLL 276
            IIR G A + T A LQ Y LL
Sbjct: 251 GIIRPGCALESTSAILQEYGLL 269

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BLAST of MELO3C026847 vs. Swiss-Prot
Match: YRDC_HUMAN (YrdC domain-containing protein, mitochondrial OS=Homo sapiens GN=YRDC PE=1 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 6.8e-44
Identity = 104/231 (45.02%), Postives = 141/231 (61.04%), Query Frame = 1


Query: 59  MPVENCLQALRPASEAFAQE---ATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEI 118
           +P    +QA  P    + +    A   L+AG V+AVPTDTLYGLAC A  + A+  +Y +
Sbjct: 50  LPGSGAVQAASPERAGWTEALRAAVAELRAGAVVAVPTDTLYGLACAASCSAALRAVYRL 109

Query: 119 KGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPG 178
           KGR    PLA+C+G V+D+ RY     +P GLL  LLPGPVT+V++R E   L+K LNP 
Sbjct: 110 KGRSEAKPLAVCLGRVADVYRYCRV-RVPEGLLKDLLPGPVTLVMERSEE--LNKDLNPF 169

Query: 179 LDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL 238
              +G+R+PD  F++ +++  E  LALTSANLS Q SS+ V +F++LW   + V DGG +
Sbjct: 170 TPLVGIRIPDHAFMQDLAQMFEGPLALTSANLSSQASSLNVEEFQDLWPQLSLVIDGGQI 229

Query: 239 -----PAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATL-QRYSLLEAAAT 281
                P  R GST+VDL+  G F IIR G A + T A L Q+Y LL + A+
Sbjct: 230 GDGQSPECRLGSTVVDLSVPGKFGIIRPGCALESTTAILQQKYGLLPSHAS 277

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BLAST of MELO3C026847 vs. Swiss-Prot
Match: YRDC_RAT (YrdC domain-containing protein, mitochondrial OS=Rattus norvegicus GN=Yrdc PE=2 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 2.2e-42
Identity = 100/226 (44.25%), Postives = 137/226 (60.62%), Query Frame = 1


Query: 59  MPVENCLQALRPASEAFAQE---ATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEI 118
           +P    ++A  P    + +    A   L+AG V+AVPTDTLYGLAC A  + A+  +Y +
Sbjct: 51  LPESEAVEAASPERSGWTEALRAAVAELRAGAVVAVPTDTLYGLACSASCSAALSCVYRL 110

Query: 119 KGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPG 178
           KGR    PLA+C+G V+D+ RY     +P  LL+ L PGPVT+V++R E   L+K LNP 
Sbjct: 111 KGRSEAKPLAVCLGRVADVYRYCQV-RVPRELLEDLFPGPVTLVMERSEE--LNKDLNPF 170

Query: 179 LDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL 238
              +G+R+PD  F+  +++     LALTSANLS Q SS+ V +F++LW H + V DGG +
Sbjct: 171 TPLVGIRIPDHAFMLDLAQMFGGPLALTSANLSSQASSLSVEEFQDLWPHLSLVIDGGPI 230

Query: 239 -----PAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQ-RYSLL 276
                P  R GST+VDL+  G F IIR+G A + T A LQ +Y LL
Sbjct: 231 GDSESPECRLGSTVVDLSVPGKFGIIRSGCALENTTAILQGKYGLL 273

[Close]

BLAST of MELO3C026847 vs. Swiss-Prot
Match: YRDC_MOUSE (YrdC domain-containing protein, mitochondrial OS=Mus musculus GN=Yrdc PE=1 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 6.3e-42
Identity = 100/226 (44.25%), Postives = 137/226 (60.62%), Query Frame = 1


Query: 59  MPVENCLQALRPASEAFAQE---ATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEI 118
           +P    ++A  P    + +    A   L+AG V+AVPTDTLYGLAC A S+ A+  +Y +
Sbjct: 51  LPESEPVEAASPERSGWTEALRAAVAELRAGAVVAVPTDTLYGLACSASSSAALSCVYRL 110

Query: 119 KGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPG 178
           KGR    PLA+C+G V+D+ RY     +P  LL+ L PGPVT+V++R E   L+K LNP 
Sbjct: 111 KGRSEAKPLAVCLGRVADVYRYCQV-RVPRELLEDLFPGPVTLVMERSEE--LNKDLNPF 170

Query: 179 LDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL 238
              +G+R+PD  F+  +++     LALTSANLS Q SS+ V +F++LW H + V DGG +
Sbjct: 171 TRLVGIRIPDHAFMLDLAQMFGGPLALTSANLSSQASSLSVEEFQDLWPHLSLVIDGGPI 230

Query: 239 -----PAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATL-QRYSLL 276
                P  R GST+VDL+  G F IIR G A + T + L Q+Y LL
Sbjct: 231 GDSQSPECRLGSTVVDLSVPGKFGIIRPGCALENTTSILQQKYGLL 273

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BLAST of MELO3C026847 vs. Swiss-Prot
Match: SUA5_PYRAB (Threonylcarbamoyl-AMP synthase OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=sua5 PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 6.4e-18
Identity = 59/175 (33.71%), Postives = 90/175 (51.43%), Query Frame = 1


Query: 79  ATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYA 138
           A   ++ GK++A PT+T+YGL  +A    AV RI+E KGR   +PL I +     +    
Sbjct: 19  AAGFIREGKLVAFPTETVYGLGANALDENAVKRIFEAKGRPADNPLIIHIASFEQLE--V 78

Query: 139 ITDHLPSG---LLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRR 198
           +   +P     L     PGP+T+VL + E  V+ + +  GLD++ VR+P  +    +   
Sbjct: 79  LAKEIPEEAEMLAKRFWPGPLTLVLPKSE--VVPRVITGGLDTVAVRMPAHEIALKLIEL 138

Query: 199 SETALALTSANLSGQPSSVCVNDF-ENLWQHCAYVYDGGVLPAGRAGSTIVDLTE 250
           SE  +A  SAN+SG+PS    +   E+ +     + DGG    G   ST++DLTE
Sbjct: 139 SERPIAAPSANISGKPSPTSAHHVAEDFYGKIECIIDGGETRIG-VESTVIDLTE 188

[Close]

BLAST of MELO3C026847 vs. TrEMBL
Match: A0A0A0LUP4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G077210 PE=4 SV=1)

HSP 1 Score: 534.3 bits (1375), Expect = 9.2e-149
Identity = 270/281 (96.09%), Postives = 277/281 (98.58%), Query Frame = 1


Query: 1   MNTLPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMP 60
           MNTLPAKMADSLSLIRTF TFPSS LGSSNYGIVSFLQRNRGSRVSFLKT+WSLEKCCM 
Sbjct: 1   MNTLPAKMADSLSLIRTFTTFPSSQLGSSNYGIVSFLQRNRGSRVSFLKTNWSLEKCCMR 60

Query: 61  VENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKL 120
           VENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKL
Sbjct: 61  VENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKL 120

Query: 121 TSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIG 180
           TSPLAICVG VSDITR+A+TDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIG
Sbjct: 121 TSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIG 180

Query: 181 VRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRA 240
           VRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRA
Sbjct: 181 VRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRA 240

Query: 241 GSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAAATI 282
           GSTI+DLTE+GTFKIIRAGSAE+QTIATL+RYSLLEAAATI
Sbjct: 241 GSTIIDLTEQGTFKIIRAGSAEEQTIATLERYSLLEAAATI 281

[Close]

BLAST of MELO3C026847 vs. TrEMBL
Match: A0A061GWW4_THECC (DHBP synthase RibB-like alpha/beta domain isoform 1 OS=Theobroma cacao GN=TCM_042043 PE=4 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 1.0e-94
Identity = 181/255 (70.98%), Postives = 215/255 (84.31%), Query Frame = 1


Query: 27  GSSNYGIVSFLQRNRGSRVSFLKTDWS-LEKCCMPVENCLQALRPASEAFAQEATDALKA 86
           G    G V FLQ+ R  R  F K   S +E+C + VE+ L  + PA++ +A EA  ALKA
Sbjct: 72  GVPKLGFVPFLQQKRRFRGGFSKKMGSNVERCEVGVESKLGLVHPATKFYADEAVIALKA 131

Query: 87  GKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPS 146
           GKVIAVPTDTLYG ACDACS+EAV++IYEIKGRK TSPLAICVG V DI R+A+TDHLP 
Sbjct: 132 GKVIAVPTDTLYGFACDACSSEAVNKIYEIKGRKHTSPLAICVGDVPDIKRFAVTDHLPY 191

Query: 147 GLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSA 206
           GLLDSLLPGPVTVVL RGESS+L+KSLNPGLDSIGVRVPD+DFIR+I+R +E+ALALTSA
Sbjct: 192 GLLDSLLPGPVTVVLGRGESSLLEKSLNPGLDSIGVRVPDSDFIRIIARDAESALALTSA 251

Query: 207 NLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQT 266
           NLSGQPSSV +NDFENLW+HCAYVYDGGVLPAGRAGST+VDLT+ G +KI+R GSA+++T
Sbjct: 252 NLSGQPSSVSINDFENLWEHCAYVYDGGVLPAGRAGSTVVDLTKPGKYKILRPGSAKEET 311

Query: 267 IATLQRYSLLEAAAT 281
           +A L++YSLLE AA+
Sbjct: 312 VAILEKYSLLEEAAS 326

[Close]

BLAST of MELO3C026847 vs. TrEMBL
Match: A0A061GXZ3_THECC (DHBP synthase RibB-like alpha/beta domain isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_042043 PE=4 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 1.7e-94
Identity = 180/250 (72.00%), Postives = 214/250 (85.60%), Query Frame = 1


Query: 32  GIVSFLQRNRGSRVSFLKTDWS-LEKCCMPVENCLQALRPASEAFAQEATDALKAGKVIA 91
           G V FLQ+ R  R  F K   S +E+C + VE+ L  + PA++ +A EA  ALKAGKVIA
Sbjct: 27  GFVPFLQQKRRFRGGFSKKMGSNVERCEVGVESKLGLVHPATKFYADEAVIALKAGKVIA 86

Query: 92  VPTDTLYGLACDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDS 151
           VPTDTLYG ACDACS+EAV++IYEIKGRK TSPLAICVG V DI R+A+TDHLP GLLDS
Sbjct: 87  VPTDTLYGFACDACSSEAVNKIYEIKGRKHTSPLAICVGDVPDIKRFAVTDHLPYGLLDS 146

Query: 152 LLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSGQ 211
           LLPGPVTVVL RGESS+L+KSLNPGLDSIGVRVPD+DFIR+I+R +E+ALALTSANLSGQ
Sbjct: 147 LLPGPVTVVLGRGESSLLEKSLNPGLDSIGVRVPDSDFIRIIARDAESALALTSANLSGQ 206

Query: 212 PSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQ 271
           PSSV +NDFENLW+HCAYVYDGGVLPAGRAGST+VDLT+ G +KI+R GSA+++T+A L+
Sbjct: 207 PSSVSINDFENLWEHCAYVYDGGVLPAGRAGSTVVDLTKPGKYKILRPGSAKEETVAILE 266

Query: 272 RYSLLEAAAT 281
           +YSLLE AA+
Sbjct: 267 KYSLLEEAAS 276

[Close]

BLAST of MELO3C026847 vs. TrEMBL
Match: D7SKX9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g02920 PE=4 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 1.7e-94
Identity = 184/276 (66.67%), Postives = 223/276 (80.80%), Query Frame = 1


Query: 4   LPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMPVEN 63
           +PAK A+  SL+ TF + P   LG + +G V  L++NR  RVSF K      K    + +
Sbjct: 3   IPAKFAER-SLLLTFRS-PLRALGVAKFGFVQILKQNRRFRVSFPK------KMEAVMGS 62

Query: 64  CLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKLTSP 123
            L  +RPA++A A+EA +A+KAGKVIAVPTDTLYG ACDACS+EAV+RIYEIKGRK TSP
Sbjct: 63  ELGVVRPATDAHAEEAIEAIKAGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSP 122

Query: 124 LAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRV 183
           LAICVG V DI R+A+TDHLP GLL SLLPGPVTVVL+RGE S+++KSLNPGLDSIGVRV
Sbjct: 123 LAICVGDVLDIQRFAVTDHLPDGLLGSLLPGPVTVVLRRGELSIIEKSLNPGLDSIGVRV 182

Query: 184 PDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGST 243
           PD DFIR+I+  SETALALTSANLSGQPSSVC+ DFENLW+HCAYVYDGGVLP+GRAGST
Sbjct: 183 PDCDFIRVIAHGSETALALTSANLSGQPSSVCIKDFENLWEHCAYVYDGGVLPSGRAGST 242

Query: 244 IVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAAA 280
           +VDL+  G +KI+R GSA ++T+A L+R+SL+  AA
Sbjct: 243 VVDLSRLGKYKILRPGSAMEETVAILERHSLMPEAA 270

[Close]

BLAST of MELO3C026847 vs. TrEMBL
Match: A0A059D561_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B02494 PE=4 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 2.5e-93
Identity = 182/273 (66.67%), Postives = 219/273 (80.22%), Query Frame = 1


Query: 4   LPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMPVEN 63
           +P K+A +L  +   A FP S  G    G V   +++R       +   SL+KC    E 
Sbjct: 3   VPTKIAHTLPPLLLHARFPLS--GVPRNGFVRIPEQSRRLESKMAR---SLDKC----EG 62

Query: 64  CLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKLTSP 123
            L  +R A+E  A EA +ALK+GKVIAVPTDTLYG ACDACSAEAV+RIYEIKGRK TSP
Sbjct: 63  KLDVVREATEPHAPEAVEALKSGKVIAVPTDTLYGFACDACSAEAVNRIYEIKGRKHTSP 122

Query: 124 LAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRV 183
           LAICVG VSDI R+A+T+HLP GLLDSLLPGPVTV+L+RGESS+LDKSLNPGLDSIGVRV
Sbjct: 123 LAICVGDVSDIERFAVTNHLPHGLLDSLLPGPVTVILRRGESSILDKSLNPGLDSIGVRV 182

Query: 184 PDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGST 243
           PD +FIR+I+R + +ALALTSANLSGQPSSVC+ DFENLW+HCAYVYDGGVLP+GRAGST
Sbjct: 183 PDCNFIRVIARGAGSALALTSANLSGQPSSVCIKDFENLWEHCAYVYDGGVLPSGRAGST 242

Query: 244 IVDLTERGTFKIIRAGSAEKQTIATLQRYSLLE 277
           IVDLT+ G++KI+R GSAE++T+A LQR+SL+E
Sbjct: 243 IVDLTKLGSYKILRPGSAEEETVAILQRHSLIE 266

[Close]

BLAST of MELO3C026847 vs. TAIR10
Match: AT5G60590.2 (AT5G60590.2 DHBP synthase RibB-like alpha/beta domain)

HSP 1 Score: 324.7 bits (831), Expect = 5.6e-89
Identity = 174/276 (63.04%), Postives = 206/276 (74.64%), Query Frame = 1


Query: 4   LPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTD-WSLEKC--CMP 63
           L  ++A+ L  I    + P    G S     S   ++R  R    K   WSLE+   C+ 
Sbjct: 3   LSTRLAEKLPGILPAPSSPLLRKGVSELRCFSIANQSRRLRWGLQKKMVWSLERAETCVV 62

Query: 64  VENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKL 123
            ++CL  + PA+EA+AQEA +A+K+ KVIAVPTDTLYG ACDACS EAV RIYEIKGRKL
Sbjct: 63  SKSCL--VHPATEAYAQEAIEAIKSEKVIAVPTDTLYGFACDACSLEAVSRIYEIKGRKL 122

Query: 124 TSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIG 183
           TSPLAICVG V DI R A T HLP GLLDSLLPGPVT+VL+RGESS+L+KSLNPG+ +IG
Sbjct: 123 TSPLAICVGDVLDIKRVATTSHLPHGLLDSLLPGPVTLVLQRGESSILEKSLNPGIGTIG 182

Query: 184 VRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRA 243
           VRVPD +FIR +SR S + LALTSANLSG  SSVCV DFENLWQHCAYVYDGG+LP+GRA
Sbjct: 183 VRVPDCEFIREVSRGSGSVLALTSANLSGDRSSVCVKDFENLWQHCAYVYDGGLLPSGRA 242

Query: 244 GSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLE 277
           GSTIVDLT+ G +KIIR GSA++ T+A L++Y L E
Sbjct: 243 GSTIVDLTKVGKYKIIRPGSAKQATVAILEKYLLEE 276

[Close]

BLAST of MELO3C026847 vs. TAIR10
Match: AT3G01920.1 (AT3G01920.1 DHBP synthase RibB-like alpha/beta domain)

HSP 1 Score: 59.7 bits (143), Expect = 3.4e-09
Identity = 63/210 (30.00%), Postives = 91/210 (43.33%), Query Frame = 1


Query: 77  QEATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITR 136
           Q   D LK G V  +PTDT+Y +ACD  +  AV R+  IK  + + PL+I    + DI  
Sbjct: 84  QPVIDLLKQGAVGVIPTDTVYAIACDCKNHSAVERLRRIKKIESSKPLSILCRSLRDIDT 143

Query: 137 YAITDHLPSG----------LLDSLLPGPVTVVLKR-----------GESSVLDKSLNPG 196
           +  T   P G           +   LPGP T +L             G +SV   S    
Sbjct: 144 F--TMGFPRGDGHGHANVFRAVKQCLPGPYTFILTASKELPKQCVGYGTTSVKYASRK-- 203

Query: 197 LDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLW-----QHCAYVY 256
             ++GVR+ D    + I ++ +  L  TS  + G   +  + D   +      +   +V 
Sbjct: 204 --NVGVRISDDALCQAILQQMDAPLICTS--VKGPKENEWMIDPTAIGDIYGPEGLDFVV 263

Query: 257 DGGVLPAGRAGSTIVDLTERGTF-KIIRAG 260
           DGG+  A    STIVD+T  G + K+IR G
Sbjct: 264 DGGIRVA--EPSTIVDMT--GPYPKVIREG 281

[Close]

BLAST of MELO3C026847 vs. NCBI nr
Match: gi|659130663|ref|XP_008465284.1| (PREDICTED: yrdC domain-containing protein, mitochondrial [Cucumis melo])

HSP 1 Score: 553.5 bits (1425), Expect = 2.1e-154
Identity = 281/281 (100.00%), Postives = 281/281 (100.00%), Query Frame = 1


Query: 1   MNTLPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMP 60
           MNTLPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMP
Sbjct: 1   MNTLPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMP 60

Query: 61  VENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKL 120
           VENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKL
Sbjct: 61  VENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKL 120

Query: 121 TSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIG 180
           TSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIG
Sbjct: 121 TSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIG 180

Query: 181 VRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRA 240
           VRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRA
Sbjct: 181 VRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRA 240

Query: 241 GSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAAATI 282
           GSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAAATI
Sbjct: 241 GSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAAATI 281

[Close]

BLAST of MELO3C026847 vs. NCBI nr
Match: gi|449462123|ref|XP_004148791.1| (PREDICTED: yrdC domain-containing protein, mitochondrial [Cucumis sativus])

HSP 1 Score: 534.3 bits (1375), Expect = 1.3e-148
Identity = 270/281 (96.09%), Postives = 277/281 (98.58%), Query Frame = 1


Query: 1   MNTLPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMP 60
           MNTLPAKMADSLSLIRTF TFPSS LGSSNYGIVSFLQRNRGSRVSFLKT+WSLEKCCM 
Sbjct: 1   MNTLPAKMADSLSLIRTFTTFPSSQLGSSNYGIVSFLQRNRGSRVSFLKTNWSLEKCCMR 60

Query: 61  VENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKL 120
           VENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKL
Sbjct: 61  VENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKL 120

Query: 121 TSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIG 180
           TSPLAICVG VSDITR+A+TDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIG
Sbjct: 121 TSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIG 180

Query: 181 VRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRA 240
           VRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRA
Sbjct: 181 VRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRA 240

Query: 241 GSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAAATI 282
           GSTI+DLTE+GTFKIIRAGSAE+QTIATL+RYSLLEAAATI
Sbjct: 241 GSTIIDLTEQGTFKIIRAGSAEEQTIATLERYSLLEAAATI 281

[Close]

BLAST of MELO3C026847 vs. NCBI nr
Match: gi|590590392|ref|XP_007016721.1| (DHBP synthase RibB-like alpha/beta domain isoform 1 [Theobroma cacao])

HSP 1 Score: 354.8 bits (909), Expect = 1.4e-94
Identity = 181/255 (70.98%), Postives = 215/255 (84.31%), Query Frame = 1


Query: 27  GSSNYGIVSFLQRNRGSRVSFLKTDWS-LEKCCMPVENCLQALRPASEAFAQEATDALKA 86
           G    G V FLQ+ R  R  F K   S +E+C + VE+ L  + PA++ +A EA  ALKA
Sbjct: 72  GVPKLGFVPFLQQKRRFRGGFSKKMGSNVERCEVGVESKLGLVHPATKFYADEAVIALKA 131

Query: 87  GKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPS 146
           GKVIAVPTDTLYG ACDACS+EAV++IYEIKGRK TSPLAICVG V DI R+A+TDHLP 
Sbjct: 132 GKVIAVPTDTLYGFACDACSSEAVNKIYEIKGRKHTSPLAICVGDVPDIKRFAVTDHLPY 191

Query: 147 GLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSA 206
           GLLDSLLPGPVTVVL RGESS+L+KSLNPGLDSIGVRVPD+DFIR+I+R +E+ALALTSA
Sbjct: 192 GLLDSLLPGPVTVVLGRGESSLLEKSLNPGLDSIGVRVPDSDFIRIIARDAESALALTSA 251

Query: 207 NLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQT 266
           NLSGQPSSV +NDFENLW+HCAYVYDGGVLPAGRAGST+VDLT+ G +KI+R GSA+++T
Sbjct: 252 NLSGQPSSVSINDFENLWEHCAYVYDGGVLPAGRAGSTVVDLTKPGKYKILRPGSAKEET 311

Query: 267 IATLQRYSLLEAAAT 281
           +A L++YSLLE AA+
Sbjct: 312 VAILEKYSLLEEAAS 326

[Close]

BLAST of MELO3C026847 vs. NCBI nr
Match: gi|225435305|ref|XP_002285123.1| (PREDICTED: yrdC domain-containing protein, mitochondrial isoform X1 [Vitis vinifera])

HSP 1 Score: 354.0 bits (907), Expect = 2.4e-94
Identity = 184/276 (66.67%), Postives = 223/276 (80.80%), Query Frame = 1


Query: 4   LPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMPVEN 63
           +PAK A+  SL+ TF + P   LG + +G V  L++NR  RVSF K      K    + +
Sbjct: 3   IPAKFAER-SLLLTFRS-PLRALGVAKFGFVQILKQNRRFRVSFPK------KMEAVMGS 62

Query: 64  CLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKLTSP 123
            L  +RPA++A A+EA +A+KAGKVIAVPTDTLYG ACDACS+EAV+RIYEIKGRK TSP
Sbjct: 63  ELGVVRPATDAHAEEAIEAIKAGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSP 122

Query: 124 LAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRV 183
           LAICVG V DI R+A+TDHLP GLL SLLPGPVTVVL+RGE S+++KSLNPGLDSIGVRV
Sbjct: 123 LAICVGDVLDIQRFAVTDHLPDGLLGSLLPGPVTVVLRRGELSIIEKSLNPGLDSIGVRV 182

Query: 184 PDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGST 243
           PD DFIR+I+  SETALALTSANLSGQPSSVC+ DFENLW+HCAYVYDGGVLP+GRAGST
Sbjct: 183 PDCDFIRVIAHGSETALALTSANLSGQPSSVCIKDFENLWEHCAYVYDGGVLPSGRAGST 242

Query: 244 IVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAAA 280
           +VDL+  G +KI+R GSA ++T+A L+R+SL+  AA
Sbjct: 243 VVDLSRLGKYKILRPGSAMEETVAILERHSLMPEAA 270

[Close]

BLAST of MELO3C026847 vs. NCBI nr
Match: gi|590590395|ref|XP_007016722.1| (DHBP synthase RibB-like alpha/beta domain isoform 2, partial [Theobroma cacao])

HSP 1 Score: 354.0 bits (907), Expect = 2.4e-94
Identity = 180/250 (72.00%), Postives = 214/250 (85.60%), Query Frame = 1


Query: 32  GIVSFLQRNRGSRVSFLKTDWS-LEKCCMPVENCLQALRPASEAFAQEATDALKAGKVIA 91
           G V FLQ+ R  R  F K   S +E+C + VE+ L  + PA++ +A EA  ALKAGKVIA
Sbjct: 27  GFVPFLQQKRRFRGGFSKKMGSNVERCEVGVESKLGLVHPATKFYADEAVIALKAGKVIA 86

Query: 92  VPTDTLYGLACDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDS 151
           VPTDTLYG ACDACS+EAV++IYEIKGRK TSPLAICVG V DI R+A+TDHLP GLLDS
Sbjct: 87  VPTDTLYGFACDACSSEAVNKIYEIKGRKHTSPLAICVGDVPDIKRFAVTDHLPYGLLDS 146

Query: 152 LLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSGQ 211
           LLPGPVTVVL RGESS+L+KSLNPGLDSIGVRVPD+DFIR+I+R +E+ALALTSANLSGQ
Sbjct: 147 LLPGPVTVVLGRGESSLLEKSLNPGLDSIGVRVPDSDFIRIIARDAESALALTSANLSGQ 206

Query: 212 PSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQ 271
           PSSV +NDFENLW+HCAYVYDGGVLPAGRAGST+VDLT+ G +KI+R GSA+++T+A L+
Sbjct: 207 PSSVSINDFENLWEHCAYVYDGGVLPAGRAGSTVVDLTKPGKYKILRPGSAKEETVAILE 266

Query: 272 RYSLLEAAAT 281
           +YSLLE AA+
Sbjct: 267 KYSLLEEAAS 276

The following BLAST results are available for this feature:

BLAST of MELO3C026847 vs. Swiss-Prot


Match Name	E-value	Identity	Description
YRDC_BOVIN	2.7e-45	49.50	YrdC domain-containing protein, mitochondrial OS=Bos taurus GN=YRDC PE=2 SV=1	[more]
YRDC_HUMAN	6.8e-44	45.02	YrdC domain-containing protein, mitochondrial OS=Homo sapiens GN=YRDC PE=1 SV=1	[more]
YRDC_RAT	2.2e-42	44.25	YrdC domain-containing protein, mitochondrial OS=Rattus norvegicus GN=Yrdc PE=2 ...	[more]
YRDC_MOUSE	6.3e-42	44.25	YrdC domain-containing protein, mitochondrial OS=Mus musculus GN=Yrdc PE=1 SV=1	[more]
SUA5_PYRAB	6.4e-18	33.71	Threonylcarbamoyl-AMP synthase OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=sua5...	[more]

BLAST of MELO3C026847 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LUP4_CUCSA	9.2e-149	96.09	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G077210 PE=4 SV=1	[more]
A0A061GWW4_THECC	1.0e-94	70.98	DHBP synthase RibB-like alpha/beta domain isoform 1 OS=Theobroma cacao GN=TCM_04...	[more]
A0A061GXZ3_THECC	1.7e-94	72.00	DHBP synthase RibB-like alpha/beta domain isoform 2 (Fragment) OS=Theobroma caca...	[more]
D7SKX9_VITVI	1.7e-94	66.67	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g02920 PE=4 SV=...	[more]
A0A059D561_EUCGR	2.5e-93	66.67	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B02494 PE=4 SV=1	[more]

BLAST of MELO3C026847 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G60590.2	5.6e-89	63.04	DHBP synthase RibB-like alpha/beta domain	[more]
AT3G01920.1	3.4e-09	30.00	DHBP synthase RibB-like alpha/beta domain	[more]

BLAST of MELO3C026847 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659130663\|ref\|XP_008465284.1\|	2.1e-154	100.00	PREDICTED: yrdC domain-containing protein, mitochondrial [Cucumis melo]	[more]
gi\|449462123\|ref\|XP_004148791.1\|	1.3e-148	96.09	PREDICTED: yrdC domain-containing protein, mitochondrial [Cucumis sativus]	[more]
gi\|590590392\|ref\|XP_007016721.1\|	1.4e-94	70.98	DHBP synthase RibB-like alpha/beta domain isoform 1 [Theobroma cacao]	[more]
gi\|225435305\|ref\|XP_002285123.1\|	2.4e-94	66.67	PREDICTED: yrdC domain-containing protein, mitochondrial isoform X1 [Vitis vinif...	[more]
gi\|590590395\|ref\|XP_007016722.1\|	2.4e-94	72.00	DHBP synthase RibB-like alpha/beta domain isoform 2, partial [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006070	YrdC-like_dom
IPR017945	DHBP_synth_RibB-like_a/b_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0003725	double-stranded RNA binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0010311	lateral root formation
biological_process	GO:0000165	MAPK cascade
biological_process	GO:0009069	serine family amino acid metabolic process
biological_process	GO:0007178	transmembrane receptor protein serine/threonine kinase signaling pathway
biological_process	GO:0006450	regulation of translational fidelity
biological_process	GO:0002949	tRNA threonylcarbamoyladenosine modification
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0003725	double-stranded RNA binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004707	MAP kinase activity
molecular_function	GO:0016779	nucleotidyltransferase activity
molecular_function	GO:0000049	tRNA binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU48659	melon EST collection version 4.0	transcribed_cluster
MU65045	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C026847T1	MELO3C026847T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU65045	MU65045	transcribed_cluster
MU48659	MU48659	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006070	YrdC-like domain	PFAM	PF01300	Sua5_yciO_yrdC	coord: 82..259 score: 2.7
IPR006070	YrdC-like domain	TIGRFAMs	TIGR00057	TIGR00057	coord: 75..266 score: 2.4
IPR006070	YrdC-like domain	PROFILE	PS51163	YRDC	coord: 73..261 score: 25
IPR017945	DHBP synthase RibB-like alpha/beta domain	GENE3D	G3DSA:3.90.870.10		coord: 76..268 score: 3.2
IPR017945	DHBP synthase RibB-like alpha/beta domain	unknown	SSF55821	YrdC/RibB	coord: 74..266 score: 4.88
None	No IPR available	PANTHER	PTHR17490	SUA5	coord: 69..270 score: 5.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C026847	Csa1G077210	Cucumber (Chinese Long) v2	cumeB001
MELO3C026847	Cla008297	Watermelon (97103) v1	mewmB146
MELO3C026847	ClCG03G002070	Watermelon (Charleston Gray)	mewcgB149
MELO3C026847	Cla97C03G053070	Watermelon (97103) v2	mewmbB153
MELO3C026847	Bhi08G000299	Wax gourd	mewgoB168
MELO3C026847	CSPI01G12530	Wild cucumber (PI 183967)	cpimeB011
MELO3C026847	Cucsa.127080	Cucumber (Gy14) v1	cgymeB197
MELO3C026847	CmaCh01G005550	Cucurbita maxima (Rimu)	cmameB391
MELO3C026847	CmoCh01G005820	Cucurbita moschata (Rifu)	cmomeB382
MELO3C026847	Lsi02G014090	Bottle gourd (USVL1VR-Ls)	lsimeB174
MELO3C026847	Cp4.1LG02g13010	Cucurbita pepo (Zucchini)	cpemeB490
MELO3C026847	CsGy1G012560	Cucumber (Gy14) v2	cgybmeB010
MELO3C026847	Carg12328	Silver-seed gourd	carmeB0449
MELO3C026847	CsaV3_1G012730	Cucumber (Chinese Long) v3	cucmeB010

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C026847	Cucurbita maxima (Rimu)	cmameB194
MELO3C026847	Cucurbita moschata (Rifu)	cmomeB181
MELO3C026847	Cucurbita pepo (Zucchini)	cpemeB479
MELO3C026847	Cucurbita pepo (Zucchini)	cpemeB681
MELO3C026847	Silver-seed gourd	carmeB0722