CSPI01G09290 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI01G09290
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr1 : 5817780 .. 5818405 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATCAAATTCCCATCTTTCCATCCTTTCCTTAAAAACATCTTTGCTTAGCTTCCTAATTCATTTTTTTTAAAAAAATGGTGTCTAAAGTGGAAGAAACACTGAGAAGGAAGTACCAGCAAGTTCATCCGCCGCAGACGGCGGTGGCAGCAGTGGCAGCGGCGGCAACGGCAAAGCAAATCCAATGCAATAAAGCCAAATATCCCAAGTTCAAGAGAAGTAGCTCCAATGTTGAAGAAGATGGCGCCTCTTCCGCCATGCTTTTGCTTGCTTGCATTGCTTTTGCCTCTTAATTTTTAGCCACGGACCCGTCATTCGAGATTTATGGAGGAGGGATTAGCTGTTGTTCTCTTGACACCGGTCGTCGGAGGCCACTTCCGGTAGCTAATTATGAGTACATAAATATTAATGGTCGTCGTAGTTTTTCTCTGATTTAGAAGTGATTATTAGATCGATAAGATATATATATTCTTTATTTCTATTTTTATTTTCCCTTAATTAGTTTTTTCTTTTTCGCGTTATTAATTTTGCACTTTTTGAAAATTATTTCTTAGTATAAATATATTTTGTTTTCTGTTTAATATTTATTTTGTTGCATCTTTTATATATAAAGAGATGGCTTTTGTTT

mRNA sequence

ATGGTGTCTAAAGTGGAAGAAACACTGAGAAGGAAGTACCAGCAAGTTCATCCGCCGCAGACGGCGGTGGCAGCAGTGGCAGCGGCGGCAACGGCAAAGCAAATCCAATGCAATAAAGCCAAATATCCCAAGTTCAAGAGAAGTAGCTCCAATGTTGAAGAAGATGGCGCCTCTTCCGCCATGCTTTTGCTTGCTTGCATTGCTTTTGCCTCTTAA

Coding sequence (CDS)

ATGGTGTCTAAAGTGGAAGAAACACTGAGAAGGAAGTACCAGCAAGTTCATCCGCCGCAGACGGCGGTGGCAGCAGTGGCAGCGGCGGCAACGGCAAAGCAAATCCAATGCAATAAAGCCAAATATCCCAAGTTCAAGAGAAGTAGCTCCAATGTTGAAGAAGATGGCGCCTCTTCCGCCATGCTTTTGCTTGCTTGCATTGCTTTTGCCTCTTAA
Homology
[Close]
BLAST of CSPI01G09290 vs. TrEMBL
Match: A0A0A0LTS0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G050230 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 5.4e-29
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 1 

Query: 1  MVSKVEETLRRKYQQVHPPQTAVAAVAAAATAKQIQCNKAKYPKFKRSSSNVEEDGASSA 60
          MVSKVEETLRRKYQQVHPPQTAVAAVAAAATAKQIQCNKAKYPKFKRSSSNVEEDGASSA
Sbjct: 1  MVSKVEETLRRKYQQVHPPQTAVAAVAAAATAKQIQCNKAKYPKFKRSSSNVEEDGASSA 60

Query: 61 MLLLACIAFAS 72
          MLLLACIAFAS
Sbjct: 61 MLLLACIAFAS 71

[Close]
BLAST of CSPI01G09290 vs. TrEMBL
Match: A0A061FZA4_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_014581 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 4.3e-10
Identity = 41/68 (60.29%), Postives = 46/68 (67.65%), Query Frame = 1 

Query: 1  MVSKVEETLRRKYQQVHPPQTAVAAVAAAATAKQIQCNKAKYPKFKRSSSNVEEDGASSA 60
          MVSKVEE ++R+ Q                  KQIQCNK K PKFKRSSSN+EEDGASSA
Sbjct: 1  MVSKVEEAMKRQQQSQQHSHKGRDHCHQQQLQKQIQCNKGKTPKFKRSSSNLEEDGASSA 60

Query: 61 MLLLACIA 69
          +LLLACIA
Sbjct: 61 ILLLACIA 68

[Close]
BLAST of CSPI01G09290 vs. TrEMBL
Match: A0A151TE32_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_011552 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 2.8e-09
Identity = 42/70 (60.00%), Postives = 47/70 (67.14%), Query Frame = 1 

Query: 1  MVSKVEETLRRKYQQVHPPQTAVAAVAAAATAKQIQCNKAKYPKFKRSSSNVEEDGASSA 60
          MVSKVEE ++R  QQ    Q     +      KQIQCNK K  KFKRSSSN+EEDGASSA
Sbjct: 1  MVSKVEEAMKRNKQQQAQTQNQQQQLQ-----KQIQCNKGKAGKFKRSSSNLEEDGASSA 60

Query: 61 MLLLACIAFA 71
          +L LACIA A
Sbjct: 61 ILFLACIACA 65

[Close]
BLAST of CSPI01G09290 vs. TrEMBL
Match: A0A0B2RRF8_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_016720 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 2.8e-09
Identity = 41/70 (58.57%), Postives = 47/70 (67.14%), Query Frame = 1 

Query: 1  MVSKVEETLRRKYQQVHPPQTAVAAVAAAATAKQIQCNKAKYPKFKRSSSNVEEDGASSA 60
          MVSKVEE ++R  Q     Q     +      KQIQCNK K  KFKRSSSN+EEDGASSA
Sbjct: 1  MVSKVEEAMKRNKQMQPQAQNQQQQLQ-----KQIQCNKGKAGKFKRSSSNLEEDGASSA 60

Query: 61 MLLLACIAFA 71
          +L LACIA+A
Sbjct: 61 ILFLACIAYA 65

[Close]
BLAST of CSPI01G09290 vs. TrEMBL
Match: I1K083_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_05G0454002 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 2.8e-09
Identity = 41/70 (58.57%), Postives = 47/70 (67.14%), Query Frame = 1 

Query: 1  MVSKVEETLRRKYQQVHPPQTAVAAVAAAATAKQIQCNKAKYPKFKRSSSNVEEDGASSA 60
          MVSKVEE ++R  Q     Q     +      KQIQCNK K  KFKRSSSN+EEDGASSA
Sbjct: 1  MVSKVEEAMKRNKQMQPQAQNQQQQLQ-----KQIQCNKGKAGKFKRSSSNLEEDGASSA 60

Query: 61 MLLLACIAFA 71
          +L LACIA+A
Sbjct: 61 ILFLACIAYA 65

[Close]
BLAST of CSPI01G09290 vs. TAIR10
Match: AT5G50335.1 (AT5G50335.1 unknown protein)

HSP 1 Score: 47.8 bits (112), Expect = 3.4e-06
Identity = 23/35 (65.71%), Postives = 29/35 (82.86%), Query Frame = 1 

Query: 37 CNKAKYPKFKRSSSNVEEDGASSAMLLLACIAFAS 72
          CNK K  +FKRS+SN++ DGASSA+ LLACIA +S
Sbjct: 35 CNKEKSCRFKRSTSNLDNDGASSAIFLLACIACSS 69

[Close]
BLAST of CSPI01G09290 vs. NCBI nr
Match: gi|700209288|gb|KGN64384.1| (hypothetical protein Csa_1G050230 [Cucumis sativus])

HSP 1 Score: 134.4 bits (337), Expect = 7.8e-29
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 1 

Query: 1  MVSKVEETLRRKYQQVHPPQTAVAAVAAAATAKQIQCNKAKYPKFKRSSSNVEEDGASSA 60
          MVSKVEETLRRKYQQVHPPQTAVAAVAAAATAKQIQCNKAKYPKFKRSSSNVEEDGASSA
Sbjct: 1  MVSKVEETLRRKYQQVHPPQTAVAAVAAAATAKQIQCNKAKYPKFKRSSSNVEEDGASSA 60

Query: 61 MLLLACIAFAS 72
          MLLLACIAFAS
Sbjct: 61 MLLLACIAFAS 71

[Close]
BLAST of CSPI01G09290 vs. NCBI nr
Match: gi|659067431|ref|XP_008439407.1| (PREDICTED: uncharacterized protein LOC103484223 [Cucumis melo])

HSP 1 Score: 121.7 bits (304), Expect = 5.2e-25
Identity = 67/74 (90.54%), Postives = 68/74 (91.89%), Query Frame = 1 

Query: 1  MVSKVEETLRRKYQQVHPPQTAVAAVAAA---ATAKQIQCNKAKYPKFKRSSSNVEEDGA 60
          MVSKVEETLRRKYQQV PPQTAV+AVAAA   AT KQIQCNK KYPKFKRSSSNVEEDGA
Sbjct: 1  MVSKVEETLRRKYQQVQPPQTAVSAVAAATTTATTKQIQCNKTKYPKFKRSSSNVEEDGA 60

Query: 61 SSAMLLLACIAFAS 72
          SSAMLLLACIAFAS
Sbjct: 61 SSAMLLLACIAFAS 74

[Close]
BLAST of CSPI01G09290 vs. NCBI nr
Match: gi|590669889|ref|XP_007037902.1| (Uncharacterized protein TCM_014581 [Theobroma cacao])

HSP 1 Score: 71.6 bits (174), Expect = 6.2e-10
Identity = 41/68 (60.29%), Postives = 46/68 (67.65%), Query Frame = 1 

Query: 1  MVSKVEETLRRKYQQVHPPQTAVAAVAAAATAKQIQCNKAKYPKFKRSSSNVEEDGASSA 60
          MVSKVEE ++R+ Q                  KQIQCNK K PKFKRSSSN+EEDGASSA
Sbjct: 1  MVSKVEEAMKRQQQSQQHSHKGRDHCHQQQLQKQIQCNKGKTPKFKRSSSNLEEDGASSA 60

Query: 61 MLLLACIA 69
          +LLLACIA
Sbjct: 61 ILLLACIA 68

[Close]
BLAST of CSPI01G09290 vs. NCBI nr
Match: gi|1012354132|gb|KYP65319.1| (hypothetical protein KK1_011552 [Cajanus cajan])

HSP 1 Score: 68.9 bits (167), Expect = 4.0e-09
Identity = 42/70 (60.00%), Postives = 47/70 (67.14%), Query Frame = 1 

Query: 1  MVSKVEETLRRKYQQVHPPQTAVAAVAAAATAKQIQCNKAKYPKFKRSSSNVEEDGASSA 60
          MVSKVEE ++R  QQ    Q     +      KQIQCNK K  KFKRSSSN+EEDGASSA
Sbjct: 1  MVSKVEEAMKRNKQQQAQTQNQQQQLQ-----KQIQCNKGKAGKFKRSSSNLEEDGASSA 60

Query: 61 MLLLACIAFA 71
          +L LACIA A
Sbjct: 61 ILFLACIACA 65

[Close]
BLAST of CSPI01G09290 vs. NCBI nr
Match: gi|734407586|gb|KHN34392.1| (hypothetical protein glysoja_016720 [Glycine soja])

HSP 1 Score: 68.9 bits (167), Expect = 4.0e-09
Identity = 41/70 (58.57%), Postives = 47/70 (67.14%), Query Frame = 1 

Query: 1  MVSKVEETLRRKYQQVHPPQTAVAAVAAAATAKQIQCNKAKYPKFKRSSSNVEEDGASSA 60
          MVSKVEE ++R  Q     Q     +      KQIQCNK K  KFKRSSSN+EEDGASSA
Sbjct: 1  MVSKVEEAMKRNKQMQPQAQNQQQQLQ-----KQIQCNKGKAGKFKRSSSNLEEDGASSA 60

Query: 61 MLLLACIAFA 71
          +L LACIA+A
Sbjct: 61 ILFLACIAYA 65

The following BLAST results are available for this feature:
BLAST of CSPI01G09290 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI01G09290 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LTS0_CUCSA5.4e-29100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G050230 PE=4 SV=1[more]
A0A061FZA4_THECC4.3e-1060.29Uncharacterized protein OS=Theobroma cacao GN=TCM_014581 PE=4 SV=1[more]
A0A151TE32_CAJCA2.8e-0960.00Uncharacterized protein OS=Cajanus cajan GN=KK1_011552 PE=4 SV=1[more]
A0A0B2RRF8_GLYSO2.8e-0958.57Uncharacterized protein OS=Glycine soja GN=glysoja_016720 PE=4 SV=1[more]
I1K083_SOYBN2.8e-0958.57Uncharacterized protein OS=Glycine max GN=GLYMA_05G0454002 PE=4 SV=1[more]
BLAST of CSPI01G09290 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G50335.13.4e-0665.71 unknown protein[more]
BLAST of CSPI01G09290 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700209288|gb|KGN64384.1|7.8e-29100.00hypothetical protein Csa_1G050230 [Cucumis sativus][more]
gi|659067431|ref|XP_008439407.1|5.2e-2590.54PREDICTED: uncharacterized protein LOC103484223 [Cucumis melo][more]
gi|590669889|ref|XP_007037902.1|6.2e-1060.29Uncharacterized protein TCM_014581 [Theobroma cacao][more]
gi|1012354132|gb|KYP65319.1|4.0e-0960.00hypothetical protein KK1_011552 [Cajanus cajan][more]
gi|734407586|gb|KHN34392.1|4.0e-0958.57hypothetical protein glysoja_016720 [Glycine soja][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G09290.1CSPI01G09290.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR38398FAMILY NOT NAMEDcoord: 2..68
score: 1.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI01G09290Cla002596Watermelon (97103) v1cpiwmB010
CSPI01G09290Csa1G050230Cucumber (Chinese Long) v2cpicuB000
CSPI01G09290MELO3C002341Melon (DHL92) v3.5.1cpimeB024
CSPI01G09290ClCG03G003560Watermelon (Charleston Gray)cpiwcgB038
CSPI01G09290Lsi02G004780Bottle gourd (USVL1VR-Ls)cpilsiB021
CSPI01G09290MELO3C002341.2Melon (DHL92) v3.6.1cpimedB023
CSPI01G09290CsaV3_1G009400Cucumber (Chinese Long) v3cpicucB001
CSPI01G09290Cla97C03G054640Watermelon (97103) v2cpiwmbB032
CSPI01G09290Bhi08G001396Wax gourdcpiwgoB067
CSPI01G09290Cucsa.391840Cucumber (Gy14) v1cgycpiB576
CSPI01G09290CmaCh13G007860Cucurbita maxima (Rimu)cmacpiB206
CSPI01G09290Cp4.1LG20g03180Cucurbita pepo (Zucchini)cpecpiB517
CSPI01G09290Cp4.1LG09g09740Cucurbita pepo (Zucchini)cpecpiB025
CSPI01G09290CsGy1G009320Cucumber (Gy14) v2cgybcpiB001
CSPI01G09290Carg07583Silver-seed gourdcarcpiB1041
CSPI01G09290Carg06779Silver-seed gourdcarcpiB0531
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI01G09290Cucurbita pepo (Zucchini)cpecpiB359
CSPI01G09290Cucurbita pepo (Zucchini)cpecpiB652
CSPI01G09290Bottle gourd (USVL1VR-Ls)cpilsiB068
CSPI01G09290Melon (DHL92) v3.6.1cpimedB046
CSPI01G09290Cucumber (Gy14) v2cgybcpiB012
CSPI01G09290Cucumber (Gy14) v2cgybcpiB052
CSPI01G09290Silver-seed gourdcarcpiB0398
CSPI01G09290Cucumber (Chinese Long) v3cpicucB014
CSPI01G09290Cucumber (Chinese Long) v3cpicucB022
CSPI01G09290Watermelon (97103) v2cpiwmbB072
CSPI01G09290Wax gourdcpiwgoB030
CSPI01G09290Cucurbita maxima (Rimu)cmacpiB394
CSPI01G09290Wild cucumber (PI 183967)cpicpiB003
CSPI01G09290Wild cucumber (PI 183967)cpicpiB008
CSPI01G09290Cucumber (Gy14) v1cgycpiB230
CSPI01G09290Cucurbita maxima (Rimu)cmacpiB063
CSPI01G09290Cucurbita maxima (Rimu)cmacpiB103
CSPI01G09290Cucurbita moschata (Rifu)cmocpiB056
CSPI01G09290Cucurbita moschata (Rifu)cmocpiB098
CSPI01G09290Cucurbita moschata (Rifu)cmocpiB193
CSPI01G09290Cucurbita moschata (Rifu)cmocpiB383
CSPI01G09290Cucumber (Chinese Long) v2cpicuB010
CSPI01G09290Melon (DHL92) v3.5.1cpimeB052
CSPI01G09290Watermelon (Charleston Gray)cpiwcgB075
CSPI01G09290Watermelon (97103) v1cpiwmB094