Cp4.1LG09g09740 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG09g09740
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG09 : 8707347 .. 8707568 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTTCTAAAGTGGAAGAAGCTCTCAGAAGGAAGCAGCAGCAAGTTCAGACGCCGCATGCGGCGGCAGGAGCGGCGGCGAAGCAAATCCAGTTCAATAAAGCTAAGTATCCCAAGTTTAAGAGAAGTAGCTCCGATGTTGGAGACGACGGCGCCTCTTCCGCCATTCTTTTGCTTGCTTGCATTGCTTTTTCCCCCGCTTCTAGCCCCGTCTCCGGTTGA

mRNA sequence

ATGGTTTCTAAAGTGGAAGAAGCTCTCAGAAGGAAGCAGCAGCAAGTTCAGACGCCGCATGCGGCGGCAGGAGCGGCGGCGAAGCAAATCCAGTTCAATAAAGCTAAGTATCCCAAGTTTAAGAGAAGTAGCTCCGATGTTGGAGACGACGGCGCCTCTTCCGCCATTCTTTTGCTTGCTTGCATTGCTTTTTCCCCCGCTTCTAGCCCCGTCTCCGGTTGA

Coding sequence (CDS)

ATGGTTTCTAAAGTGGAAGAAGCTCTCAGAAGGAAGCAGCAGCAAGTTCAGACGCCGCATGCGGCGGCAGGAGCGGCGGCGAAGCAAATCCAGTTCAATAAAGCTAAGTATCCCAAGTTTAAGAGAAGTAGCTCCGATGTTGGAGACGACGGCGCCTCTTCCGCCATTCTTTTGCTTGCTTGCATTGCTTTTTCCCCCGCTTCTAGCCCCGTCTCCGGTTGA

Protein sequence

MVSKVEEALRRKQQQVQTPHAAAGAAAKQIQFNKAKYPKFKRSSSDVGDDGASSAILLLACIAFSPASSPVSG
BLAST of Cp4.1LG09g09740 vs. TrEMBL
Match: A0A0A0LTS0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G050230 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.0e-14
Identity = 51/70 (72.86%), Postives = 55/70 (78.57%), Query Frame = 1

Query: 1  MVSKVEEALRRKQQQVQTPHAA-----AGAAAKQIQFNKAKYPKFKRSSSDVGDDGASSA 60
          MVSKVEE LRRK QQV  P  A     A A AKQIQ NKAKYPKFKRSSS+V +DGASSA
Sbjct: 1  MVSKVEETLRRKYQQVHPPQTAVAAVAAAATAKQIQCNKAKYPKFKRSSSNVEEDGASSA 60

Query: 61 ILLLACIAFS 66
          +LLLACIAF+
Sbjct: 61 MLLLACIAFA 70

BLAST of Cp4.1LG09g09740 vs. TrEMBL
Match: A0A061FZA4_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_014581 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 7.5e-10
Identity = 43/72 (59.72%), Postives = 51/72 (70.83%), Query Frame = 1

Query: 1  MVSKVEEALRRKQQQVQTPHAAAGAA-----AKQIQFNKAKYPKFKRSSSDVGDDGASSA 60
          MVSKVEEA++R+QQ  Q  H            KQIQ NK K PKFKRSSS++ +DGASSA
Sbjct: 1  MVSKVEEAMKRQQQSQQHSHKGRDHCHQQQLQKQIQCNKGKTPKFKRSSSNLEEDGASSA 60

Query: 61 ILLLACIAFSPA 68
          ILLLACIA +P+
Sbjct: 61 ILLLACIACTPS 72

BLAST of Cp4.1LG09g09740 vs. TrEMBL
Match: A0A151TE32_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_011552 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.1e-08
Identity = 43/68 (63.24%), Postives = 51/68 (75.00%), Query Frame = 1

Query: 1  MVSKVEEALRR-KQQQVQTPHAAAGAAAKQIQFNKAKYPKFKRSSSDVGDDGASSAILLL 60
          MVSKVEEA++R KQQQ QT +       KQIQ NK K  KFKRSSS++ +DGASSAIL L
Sbjct: 1  MVSKVEEAMKRNKQQQAQTQNQQQ-QLQKQIQCNKGKAGKFKRSSSNLEEDGASSAILFL 60

Query: 61 ACIAFSPA 68
          ACIA +P+
Sbjct: 61 ACIACAPS 67

BLAST of Cp4.1LG09g09740 vs. TrEMBL
Match: I1K083_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_05G0454002 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 2.4e-08
Identity = 38/67 (56.72%), Postives = 47/67 (70.15%), Query Frame = 1

Query: 1  MVSKVEEALRRKQQQVQTPHAAAGAAAKQIQFNKAKYPKFKRSSSDVGDDGASSAILLLA 60
          MVSKVEEA++R +Q             KQIQ NK K  KFKRSSS++ +DGASSAIL LA
Sbjct: 1  MVSKVEEAMKRNKQMQPQAQNQQQQLQKQIQCNKGKAGKFKRSSSNLEEDGASSAILFLA 60

Query: 61 CIAFSPA 68
          CIA++P+
Sbjct: 61 CIAYAPS 67

BLAST of Cp4.1LG09g09740 vs. TrEMBL
Match: A0A0S3R5Q4_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G393800 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 2.4e-08
Identity = 39/67 (58.21%), Postives = 47/67 (70.15%), Query Frame = 1

Query: 1  MVSKVEEALRRKQQQVQTPHAAAGAAAKQIQFNKAKYPKFKRSSSDVGDDGASSAILLLA 60
          MVSKVEEA++R +Q  Q          KQIQ NK K  KFKRSSS++ +DGASSAIL LA
Sbjct: 1  MVSKVEEAMKRNKQMQQQGQNQQQQLQKQIQCNKGKAGKFKRSSSNLEEDGASSAILFLA 60

Query: 61 CIAFSPA 68
          CIA +P+
Sbjct: 61 CIACAPS 67

BLAST of Cp4.1LG09g09740 vs. NCBI nr
Match: gi|700209288|gb|KGN64384.1| (hypothetical protein Csa_1G050230 [Cucumis sativus])

HSP 1 Score: 87.0 bits (214), Expect = 1.4e-14
Identity = 51/70 (72.86%), Postives = 55/70 (78.57%), Query Frame = 1

Query: 1  MVSKVEEALRRKQQQVQTPHAA-----AGAAAKQIQFNKAKYPKFKRSSSDVGDDGASSA 60
          MVSKVEE LRRK QQV  P  A     A A AKQIQ NKAKYPKFKRSSS+V +DGASSA
Sbjct: 1  MVSKVEETLRRKYQQVHPPQTAVAAVAAAATAKQIQCNKAKYPKFKRSSSNVEEDGASSA 60

Query: 61 ILLLACIAFS 66
          +LLLACIAF+
Sbjct: 61 MLLLACIAFA 70

BLAST of Cp4.1LG09g09740 vs. NCBI nr
Match: gi|659067431|ref|XP_008439407.1| (PREDICTED: uncharacterized protein LOC103484223 [Cucumis melo])

HSP 1 Score: 84.7 bits (208), Expect = 7.2e-14
Identity = 50/73 (68.49%), Postives = 54/73 (73.97%), Query Frame = 1

Query: 1  MVSKVEEALRRKQQQVQTPHAAAGAAA--------KQIQFNKAKYPKFKRSSSDVGDDGA 60
          MVSKVEE LRRK QQVQ P  A  A A        KQIQ NK KYPKFKRSSS+V +DGA
Sbjct: 1  MVSKVEETLRRKYQQVQPPQTAVSAVAAATTTATTKQIQCNKTKYPKFKRSSSNVEEDGA 60

Query: 61 SSAILLLACIAFS 66
          SSA+LLLACIAF+
Sbjct: 61 SSAMLLLACIAFA 73

BLAST of Cp4.1LG09g09740 vs. NCBI nr
Match: gi|590669889|ref|XP_007037902.1| (Uncharacterized protein TCM_014581 [Theobroma cacao])

HSP 1 Score: 70.9 bits (172), Expect = 1.1e-09
Identity = 43/72 (59.72%), Postives = 51/72 (70.83%), Query Frame = 1

Query: 1  MVSKVEEALRRKQQQVQTPHAAAGAA-----AKQIQFNKAKYPKFKRSSSDVGDDGASSA 60
          MVSKVEEA++R+QQ  Q  H            KQIQ NK K PKFKRSSS++ +DGASSA
Sbjct: 1  MVSKVEEAMKRQQQSQQHSHKGRDHCHQQQLQKQIQCNKGKTPKFKRSSSNLEEDGASSA 60

Query: 61 ILLLACIAFSPA 68
          ILLLACIA +P+
Sbjct: 61 ILLLACIACTPS 72

BLAST of Cp4.1LG09g09740 vs. NCBI nr
Match: gi|1012354132|gb|KYP65319.1| (hypothetical protein KK1_011552 [Cajanus cajan])

HSP 1 Score: 67.0 bits (162), Expect = 1.5e-08
Identity = 43/68 (63.24%), Postives = 51/68 (75.00%), Query Frame = 1

Query: 1  MVSKVEEALRR-KQQQVQTPHAAAGAAAKQIQFNKAKYPKFKRSSSDVGDDGASSAILLL 60
          MVSKVEEA++R KQQQ QT +       KQIQ NK K  KFKRSSS++ +DGASSAIL L
Sbjct: 1  MVSKVEEAMKRNKQQQAQTQNQQQ-QLQKQIQCNKGKAGKFKRSSSNLEEDGASSAILFL 60

Query: 61 ACIAFSPA 68
          ACIA +P+
Sbjct: 61 ACIACAPS 67

BLAST of Cp4.1LG09g09740 vs. NCBI nr
Match: gi|1009130505|ref|XP_015882337.1| (PREDICTED: uncharacterized protein LOC107418177 [Ziziphus jujuba])

HSP 1 Score: 66.2 bits (160), Expect = 2.6e-08
Identity = 39/68 (57.35%), Postives = 51/68 (75.00%), Query Frame = 1

Query: 1  MVSKVEEALRRKQQQVQTPHAAAGAAAKQIQFNKAKYPKFKRSSSDVGDDGASSAILLLA 60
          MVSK+EEA+++KQQ+ Q  H       KQIQ NK K  KFKRSSS++ +DG S+AILLLA
Sbjct: 1  MVSKMEEAMKKKQQKEQQQHHQQ-QLQKQIQCNKGKAVKFKRSSSNLEEDGVSTAILLLA 60

Query: 61 CIAFSPAS 69
          CIA +P++
Sbjct: 61 CIACAPSN 67

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LTS0_CUCSA1.0e-1472.86Uncharacterized protein OS=Cucumis sativus GN=Csa_1G050230 PE=4 SV=1[more]
A0A061FZA4_THECC7.5e-1059.72Uncharacterized protein OS=Theobroma cacao GN=TCM_014581 PE=4 SV=1[more]
A0A151TE32_CAJCA1.1e-0863.24Uncharacterized protein OS=Cajanus cajan GN=KK1_011552 PE=4 SV=1[more]
I1K083_SOYBN2.4e-0856.72Uncharacterized protein OS=Glycine max GN=GLYMA_05G0454002 PE=4 SV=1[more]
A0A0S3R5Q4_PHAAN2.4e-0858.21Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G393800 PE=... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|700209288|gb|KGN64384.1|1.4e-1472.86hypothetical protein Csa_1G050230 [Cucumis sativus][more]
gi|659067431|ref|XP_008439407.1|7.2e-1468.49PREDICTED: uncharacterized protein LOC103484223 [Cucumis melo][more]
gi|590669889|ref|XP_007037902.1|1.1e-0959.72Uncharacterized protein TCM_014581 [Theobroma cacao][more]
gi|1012354132|gb|KYP65319.1|1.5e-0863.24hypothetical protein KK1_011552 [Cajanus cajan][more]
gi|1009130505|ref|XP_015882337.1|2.6e-0857.35PREDICTED: uncharacterized protein LOC107418177 [Ziziphus jujuba][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG09g09740.1Cp4.1LG09g09740.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR38398FAMILY NOT NAMEDcoord: 2..70
score: 2.7
NoneNo IPR availablePANTHERPTHR38398:SF1SUBFAMILY NOT NAMEDcoord: 2..70
score: 2.7

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG09g09740Cp4.1LG20g03180Cucurbita pepo (Zucchini)cpecpeB045
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG09g09740Wax gourdcpewgoB0046
Cp4.1LG09g09740Cucurbita maxima (Rimu)cmacpeB214
Cp4.1LG09g09740Cucurbita maxima (Rimu)cmacpeB416
Cp4.1LG09g09740Cucurbita moschata (Rifu)cmocpeB184
Cp4.1LG09g09740Cucurbita moschata (Rifu)cmocpeB377
Cp4.1LG09g09740Melon (DHL92) v3.5.1cpemeB026
Cp4.1LG09g09740Cucumber (Gy14) v2cgybcpeB018
Cp4.1LG09g09740Melon (DHL92) v3.6.1cpemedB031