BhiUN179G5 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	BhiUN179G5
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Cotton fiber protein
Location	Contig179 : 49081 .. 49452 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAGAGAAGATATCGCCAATGGCCTCCCTCCTGAAGAAGACATTGACGAAACTCACGGCAGTTGTTCGTCTCTGTCTCGTTTGCCGGAACAGTTCCCGGCGTCTGAGATCATCCGATTCCGATGATGATCGGAAGGTAGGGCTACGGATTGTCCTGGAAGATCAGAGGAGAATCACTGAGAATTCTTCGGTTAGAAAGCTTGAGCGTGTTTCGAGTTCAAGACACGCAAGCTATGAAGACGATGTTGATCAGCGAGCGGAGATTTTTATTCAGAATTTTCGCCGTTATTTGAGGTTAGAAAGACAAATTTCTTTGCAATTGAGGCATTATAGAGTTAATAGCTCTGAAACAGAGTATGAACAGAGATAG

mRNA sequence

ATGACAGAGAAGATATCGCCAATGGCCTCCCTCCTGAAGAAGACATTGACGAAACTCACGGCAGTTGTTCGTCTCTGTCTCGTTTGCCGGAACAGTTCCCGGCGTCTGAGATCATCCGATTCCGATGATGATCGGAAGGTAGGGCTACGGATTGTCCTGGAAGATCAGAGGAGAATCACTGAGAATTCTTCGGTTAGAAAGCTTGAGCGTGTTTCGAGTTCAAGACACGCAAGCTATGAAGACGATGTTGATCAGCGAGCGGAGATTTTTATTCAGAATTTTCGCCGTTATTTGAGGTTAGAAAGACAAATTTCTTTGCAATTGAGGCATTATAGAGTTAATAGCTCTGAAACAGAGTATGAACAGAGATAG

Coding sequence (CDS)

ATGACAGAGAAGATATCGCCAATGGCCTCCCTCCTGAAGAAGACATTGACGAAACTCACGGCAGTTGTTCGTCTCTGTCTCGTTTGCCGGAACAGTTCCCGGCGTCTGAGATCATCCGATTCCGATGATGATCGGAAGGTAGGGCTACGGATTGTCCTGGAAGATCAGAGGAGAATCACTGAGAATTCTTCGGTTAGAAAGCTTGAGCGTGTTTCGAGTTCAAGACACGCAAGCTATGAAGACGATGTTGATCAGCGAGCGGAGATTTTTATTCAGAATTTTCGCCGTTATTTGAGGTTAGAAAGACAAATTTCTTTGCAATTGAGGCATTATAGAGTTAATAGCTCTGAAACAGAGTATGAACAGAGATAG

Protein sequence

MTEKISPMASLLKKTLTKLTAVVRLCLVCRNSSRRLRSSDSDDDRKVGLRIVLEDQRRITENSSVRKLERVSSSRHASYEDDVDQRAEIFIQNFRRYLRLERQISLQLRHYRVNSSETEYEQR

Homology

[Close]

BLAST of BhiUN179G5 vs. TAIR10
Match: AT5G57510.1 (unknown protein)

HSP 1 Score: 44.3 bits (103), Expect = 6.4e-05
Identity = 33/90 (36.67%), Postives = 51/90 (56.67%), Query Frame = 0


Query: 31  NSSRRLRSSDSDDDRKVGLRIVLEDQRRITENSSVRKLERVSSSRHASYEDDVDQRAEIF 90
           +SS  LR S +D   + GL     +    +  SS   L R  S   +S ++D+D +AE+F
Sbjct: 42  SSSSSLRLSFND---RPGLTAAFTENEPDSTGSSRGALYRTVSYDQSS-DEDIDNKAEMF 101

Query: 91  IQNFRRYLRLERQISLQLRHYRVNSSETEY 121
           I NF R L++ERQISL+L++ + N+    Y
Sbjct: 102 IANFYRQLKIERQISLELKYCQGNNQSFNY 127

[Close]

BLAST of BhiUN179G5 vs. TrEMBL
Match: tr|A0A0A0L4Z8|A0A0A0L4Z8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G004530 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 2.4e-38
Identity = 94/123 (76.42%), Postives = 104/123 (84.55%), Query Frame = 0


Query: 1   MTEKISPMASLLKKTLTKLTAVVRLCLVCRNSSRRLRSSDSDDDRKVGLRIVLEDQRRIT 60
           M EK SPMAS L+K L KL AV+RLCL+ R  SRRL S DSDDD+KVG+RIVLEDQ RI 
Sbjct: 1   MAEKKSPMASRLQKALMKLKAVLRLCLLPRQRSRRLGSFDSDDDQKVGIRIVLEDQSRIA 60

Query: 61  ENSSVRKLERVSSSRHASYEDDVDQRAEIFIQNFRRYLRLERQISLQLRHYRVNSSETEY 120
           E+S VRKLER SSSR+  YE+DVDQRAEIFI+NFRR LRLERQISLQLR+YRVNS ETEY
Sbjct: 61  ESSFVRKLERASSSRYGGYEEDVDQRAEIFIENFRRQLRLERQISLQLRYYRVNSYETEY 120

Query: 121 EQR 124
           EQR
Sbjct: 121 EQR 123

[Close]

BLAST of BhiUN179G5 vs. TrEMBL
Match: tr|A0A0A0L6A3|A0A0A0L6A3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G004520 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.0e-12
Identity = 63/119 (52.94%), Postives = 73/119 (61.34%), Query Frame = 0


Query: 8   MASLLKKTLTKLTAVVRLCLVCRNSSRRLRSSDSDDDRKVGLRIVLEDQRRITENSSVRK 67
           MA  L++TL KL A +RLCL+ R  S                R VLED      + + R 
Sbjct: 1   MALRLEETLNKLKAFLRLCLLLRRRS------------IYRTRNVLED------DQTARN 60

Query: 68  LERVSSSRHAS---YEDDVDQRAEIFIQNFRRYLRLERQISLQLRHYRV--NSSETEYE 122
           LER SSSR+ S   +EDDVD RAEIFI+NFRR LRLERQISLQLR Y V  NS ET+YE
Sbjct: 61  LERDSSSRYESCEEFEDDVDHRAEIFIENFRRQLRLERQISLQLRLYGVNNNSFETDYE 101

[Close]

BLAST of BhiUN179G5 vs. TrEMBL
Match: tr|A0A2K1WTY1|A0A2K1WTY1_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa OX=3694 GN=POPTR_018G006800v3 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 6.1e-10
Identity = 45/90 (50.00%), Postives = 60/90 (66.67%), Query Frame = 0


Query: 31  NSSRRLRSSDSDDDRKVGLRIVLEDQRRITENSSVRKLERVSSSRHASYEDDVDQRAEIF 90
           +SS  +R    +D  ++GL  V+ED     ++  VR LERV S   +S +DDVD+RAEIF
Sbjct: 81  SSSGTIRRLSFND--RIGLHGVIEDVESDHQSKPVRALERVRSHDGSSSDDDVDKRAEIF 140

Query: 91  IQNFRRYLRLERQISLQLRHYRVNSSETEY 121
           I NFRR L +ERQ+SLQLR+YR NS   +Y
Sbjct: 141 ITNFRRQLLMERQVSLQLRYYRGNSFGRDY 168

[Close]

BLAST of BhiUN179G5 vs. TrEMBL
Match: tr|A0A2C9UBN9|A0A2C9UBN9_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_16G135500 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 6.1e-10
Identity = 54/116 (46.55%), Postives = 71/116 (61.21%), Query Frame = 0


Query: 12  LKKTLTKLTAVV-------RLCLVCRNSSRRLRSSDSDDDRKVGLRIVLEDQRRITENSS 71
           LK+ + KL  ++       R+  + RN SRR R    +D  ++GL   +ED     EN  
Sbjct: 12  LKRAVKKLNFLLSFNLRRWRVASILRNVSRRRRRLSFND--RLGLHGCIEDVES-DENKR 71

Query: 72  VRKLERVSSSRHASYEDDVDQRAEIFIQNFRRYLRLERQISLQLRHYRVNSSETEY 121
           VR L+R   +R  + EDD+DQRAEIFI+NFRR L LERQISLQLR+YR NS   +Y
Sbjct: 72  VRALQR---TRSYASEDDIDQRAEIFIENFRRQLLLERQISLQLRYYRGNSFTRDY 121

[Close]

BLAST of BhiUN179G5 vs. TrEMBL
Match: tr|A0A1R3J730|A0A1R3J730_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_19032 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 8.8e-09
Identity = 54/115 (46.96%), Postives = 71/115 (61.74%), Query Frame = 0


Query: 5   ISPMASLLKKTLTKLTAVVRLCLVCRNSSRRLRSSDSDDDRKVGLRIVLEDQRRITENSS 64
           +  + SLL   LTK     RL    R +S R R + S +DR +GL   LED+      SS
Sbjct: 16  VKKLNSLLSLDLTKW----RLSCFLRRASGRWRPTLSFNDR-LGLHSFLEDE-ETNGRSS 75

Query: 65  VRKLERVSSSRHASYEDDVDQRAEIFIQNFRRYLRLERQISLQLRHYRVNSSETE 120
           VR L+RV S  + + +DDVD+RAEIFI NFRR L LERQ+SL+LR+ R  S +T+
Sbjct: 76  VRALQRVRS--YGAGDDDVDKRAEIFISNFRRQLWLERQVSLELRYCRTTSFDTD 122

[Close]

BLAST of BhiUN179G5 vs. NCBI nr
Match: KGN55687.1 (hypothetical protein Csa_3G004530 [Cucumis sativus])

HSP 1 Score: 167.2 bits (422), Expect = 3.6e-38
Identity = 94/123 (76.42%), Postives = 104/123 (84.55%), Query Frame = 0


Query: 1   MTEKISPMASLLKKTLTKLTAVVRLCLVCRNSSRRLRSSDSDDDRKVGLRIVLEDQRRIT 60
           M EK SPMAS L+K L KL AV+RLCL+ R  SRRL S DSDDD+KVG+RIVLEDQ RI 
Sbjct: 1   MAEKKSPMASRLQKALMKLKAVLRLCLLPRQRSRRLGSFDSDDDQKVGIRIVLEDQSRIA 60

Query: 61  ENSSVRKLERVSSSRHASYEDDVDQRAEIFIQNFRRYLRLERQISLQLRHYRVNSSETEY 120
           E+S VRKLER SSSR+  YE+DVDQRAEIFI+NFRR LRLERQISLQLR+YRVNS ETEY
Sbjct: 61  ESSFVRKLERASSSRYGGYEEDVDQRAEIFIENFRRQLRLERQISLQLRYYRVNSYETEY 120

Query: 121 EQR 124
           EQR
Sbjct: 121 EQR 123

[Close]

BLAST of BhiUN179G5 vs. NCBI nr
Match: XP_011652707.1 (PREDICTED: uncharacterized protein LOC105435054 [Cucumis sativus])

HSP 1 Score: 158.7 bits (400), Expect = 1.3e-35
Identity = 89/116 (76.72%), Postives = 99/116 (85.34%), Query Frame = 0


Query: 8   MASLLKKTLTKLTAVVRLCLVCRNSSRRLRSSDSDDDRKVGLRIVLEDQRRITENSSVRK 67
           MAS L+K L KL AV+RLCL+ R  SRRL S DSDDD+KVG+RIVLEDQ RI E+S VRK
Sbjct: 1   MASRLQKALMKLKAVLRLCLLPRQRSRRLGSFDSDDDQKVGIRIVLEDQSRIAESSFVRK 60

Query: 68  LERVSSSRHASYEDDVDQRAEIFIQNFRRYLRLERQISLQLRHYRVNSSETEYEQR 124
           LER SSSR+  YE+DVDQRAEIFI+NFRR LRLERQISLQLR+YRVNS ETEYEQR
Sbjct: 61  LERASSSRYGGYEEDVDQRAEIFIENFRRQLRLERQISLQLRYYRVNSYETEYEQR 116

[Close]

BLAST of BhiUN179G5 vs. NCBI nr
Match: XP_022145292.1 (uncharacterized protein LOC111014780 [Momordica charantia])

HSP 1 Score: 109.8 bits (273), Expect = 6.8e-21
Identity = 71/120 (59.17%), Postives = 86/120 (71.67%), Query Frame = 0


Query: 1   MTEKISPMASLLKKTLTKLTAVVR----LCLVCRNSSRRLRSSDSDDDRKVGLRIVLEDQ 60
           M EK SP+   LKK + K+TA++R    LCL  R  S RLRS  S  DR VGLR  LED+
Sbjct: 1   MAEKKSPLMPRLKKAVRKITALLRLNLSLCLARRRPSGRLRSF-SFSDRTVGLRSFLEDE 60

Query: 61  RRITENSSVRKLERVSSSRHASYEDDVDQRAEIFIQNFRRYLRLERQISLQLRHYRVNSS 117
             I EN S+R+LER SS R+ + EDDVD+R++IFI NF R LRLERQISLQLR+YR+NSS
Sbjct: 61  -EIGENCSMRRLERASSLRYGNAEDDVDKRSQIFIDNFLRRLRLERQISLQLRYYRINSS 118

[Close]

BLAST of BhiUN179G5 vs. NCBI nr
Match: KGN55686.1 (hypothetical protein Csa_3G004520 [Cucumis sativus])

HSP 1 Score: 82.0 bits (201), Expect = 1.5e-12
Identity = 63/119 (52.94%), Postives = 73/119 (61.34%), Query Frame = 0


Query: 8   MASLLKKTLTKLTAVVRLCLVCRNSSRRLRSSDSDDDRKVGLRIVLEDQRRITENSSVRK 67
           MA  L++TL KL A +RLCL+ R  S                R VLED      + + R 
Sbjct: 1   MALRLEETLNKLKAFLRLCLLLRRRS------------IYRTRNVLED------DQTARN 60

Query: 68  LERVSSSRHAS---YEDDVDQRAEIFIQNFRRYLRLERQISLQLRHYRV--NSSETEYE 122
           LER SSSR+ S   +EDDVD RAEIFI+NFRR LRLERQISLQLR Y V  NS ET+YE
Sbjct: 61  LERDSSSRYESCEEFEDDVDHRAEIFIENFRRQLRLERQISLQLRLYGVNNNSFETDYE 101

[Close]

BLAST of BhiUN179G5 vs. NCBI nr
Match: XP_021596711.1 (uncharacterized protein LOC110603324 [Manihot esculenta] >OAY27569.1 hypothetical protein MANES_16G135500 [Manihot esculenta])

HSP 1 Score: 72.8 bits (177), Expect = 9.2e-10
Identity = 54/116 (46.55%), Postives = 71/116 (61.21%), Query Frame = 0


Query: 12  LKKTLTKLTAVV-------RLCLVCRNSSRRLRSSDSDDDRKVGLRIVLEDQRRITENSS 71
           LK+ + KL  ++       R+  + RN SRR R    +D  ++GL   +ED     EN  
Sbjct: 12  LKRAVKKLNFLLSFNLRRWRVASILRNVSRRRRRLSFND--RLGLHGCIEDVES-DENKR 71

Query: 72  VRKLERVSSSRHASYEDDVDQRAEIFIQNFRRYLRLERQISLQLRHYRVNSSETEY 121
           VR L+R   +R  + EDD+DQRAEIFI+NFRR L LERQISLQLR+YR NS   +Y
Sbjct: 72  VRALQR---TRSYASEDDIDQRAEIFIENFRRQLLLERQISLQLRYYRGNSFTRDY 121

The following BLAST results are available for this feature:

BLAST of BhiUN179G5 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G57510.1	6.4e-05	36.67	unknown protein	[more]

BLAST of BhiUN179G5 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of BhiUN179G5 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L4Z8\|A0A0A0L4Z8_CUCSA	2.4e-38	76.42	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G004530 PE=4 SV=1	[more]
tr\|A0A0A0L6A3\|A0A0A0L6A3_CUCSA	1.0e-12	52.94	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G004520 PE=4 SV=1	[more]
tr\|A0A2K1WTY1\|A0A2K1WTY1_POPTR	6.1e-10	50.00	Uncharacterized protein (Fragment) OS=Populus trichocarpa OX=3694 GN=POPTR_018G0...	[more]
tr\|A0A2C9UBN9\|A0A2C9UBN9_MANES	6.1e-10	46.55	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_16G135500 PE=4 SV=...	[more]
tr\|A0A1R3J730\|A0A1R3J730_9ROSI	8.8e-09	46.96	Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_19032 PE=4 SV=1	[more]

BLAST of BhiUN179G5 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN55687.1	3.6e-38	76.42	hypothetical protein Csa_3G004530 [Cucumis sativus]	[more]
XP_011652707.1	1.3e-35	76.72	PREDICTED: uncharacterized protein LOC105435054 [Cucumis sativus]	[more]
XP_022145292.1	6.8e-21	59.17	uncharacterized protein LOC111014780 [Momordica charantia]	[more]
KGN55686.1	1.5e-12	52.94	hypothetical protein Csa_3G004520 [Cucumis sativus]	[more]
XP_021596711.1	9.2e-10	46.55	uncharacterized protein LOC110603324 [Manihot esculenta] >OAY27569.1 hypothetica...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008480	DUF761_pln

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0010200	response to chitin
biological_process	GO:0071456	cellular response to hypoxia
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
BhiUN179M5	BhiUN179M5	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008480	Protein of unknown function DUF761, plant	PFAM	PF05553	DUF761	coord: 80..109 e-value: 4.4E-9 score: 35.6
None	No IPR available	PANTHER	PTHR33098	FAMILY NOT NAMED	coord: 29..117
None	No IPR available	PANTHER	PTHR33098:SF3	SUBFAMILY NOT NAMED	coord: 29..117

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
BhiUN179G5	Csa3G004520	Cucumber (Chinese Long) v2	cuwgoB337
BhiUN179G5	MELO3C013791	Melon (DHL92) v3.5.1	mewgoB561
BhiUN179G5	ClCG10G000950	Watermelon (Charleston Gray)	wcgwgoB131
BhiUN179G5	CSPI03G00980	Wild cucumber (PI 183967)	cpiwgoB340
BhiUN179G5	Cucsa.322390	Cucumber (Gy14) v1	cgywgoB655
BhiUN179G5	CmaCh06G005990	Cucurbita maxima (Rimu)	cmawgoB1042
BhiUN179G5	CmaCh16G012210	Cucurbita maxima (Rimu)	cmawgoB0450
BhiUN179G5	CmoCh06G006050	Cucurbita moschata (Rifu)	cmowgoB1036
BhiUN179G5	CmoCh16G012640	Cucurbita moschata (Rifu)	cmowgoB0447
BhiUN179G5	Lsi07G011260	Bottle gourd (USVL1VR-Ls)	lsiwgoB575
BhiUN179G5	Cp4.1LG14g10030	Cucurbita pepo (Zucchini)	cpewgoB0308
BhiUN179G5	Cp4.1LG08g09000	Cucurbita pepo (Zucchini)	cpewgoB1137
BhiUN179G5	CsGy3G000930	Cucumber (Gy14) v2	cgybwgoB327
BhiUN179G5	MELO3C013791.2	Melon (DHL92) v3.6.1	medwgoB565
BhiUN179G5	Carg16285	Silver-seed gourd	carwgoB0798
BhiUN179G5	Carg19493	Silver-seed gourd	carwgoB0517
BhiUN179G5	CsaV3_3G001020	Cucumber (Chinese Long) v3	cucwgoB343
BhiUN179G5	Cla008868	Watermelon (97103) v1	wgowmB575
BhiUN179G5	Cla97C10G185560	Watermelon (97103) v2	wgowmbB548

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None