Bhi08G000048 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi08G000048
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Ferredoxin
Location	chr8 : 1886222 .. 1888523 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTAAATCGAAATGTTAGAAAAAGAAAAAAGAAGTCAGAGATGGAGAGCTAGGTTTTATAGAGCAAAAAGAAGAGTAAGAACTAAGAAGGTTGGATCTGGGACTTCACTACCTTGCCTCTTCGGAGCTTGCAAATGGCAAATTCTCCATCCTCTTCCTCTTCTGGGCTTTCACCATGCGCCAAAAGCCATTTCTCTTCCTCTTCCCCTTTCTATATATATATATATATATCTATATTGCCCTAATTGTCGCATCATTCAGCGACTTAGGGCTTGCCTTCGATTGCGTAGCCTCGCTTTCTCCGCCGCCTCTCTCTCTTTGTAACTGTAAGCTTCACCTCCATTTCCGCCCCTTGTTTCTTTTGCTTTCTCATTGATCAGTCAATTGTGAAATTACTCCCTTGTTCTCTGTGTTTTCTATTCTTAATGTATGTGTTATTTCTATGATCTGCAATGCAAATCAAATATTTGTGCCCTACAAATCTCCCTCATTAATTTGTCTTTTTTCTTTTCCGATTTCGCTATTGACTGTATTGCCTCATTTCCCATGTTTCTTTTAACATCACAAGCTTGATTTGTCGTTTTGGGTTGTTCTAGAGATGATAAAATAGTGGTAACTTCTTTTCTTCAAACCTGTTTTTCCGAATGAAACTTTTGGACACTGTTGAGATTTTGTTCTAAACCAATGAAACTGACCTGGGTTTGATAGTTTTATTTATTTGGGTGTTGGAGCTTCGAGTGAAGAGCAGAAAAAAGCCCTTAGGTTGCATCTTCTCATAATGCTCCATACATCAATTGCCTCCATAAACATTGAATAGCTTTCTGTTACTCCATGTCTTGTTTTCAAGAGGCATACAAAATATCAAAACCCATCATGTATTGTATTGGTTTCTCTATGGTCTGAGTTTAAAGATTGGATGCTTAATTTTCACATGCACGCACTCCATTAAGTATTGAATTTACCTCCATCCATCAACTTAACATTTTAGGTCGATTGGTGATTTAAAATTGTACCAGAGTAAGTGATCCAAGAAGTCATGTATTTAAACCCTTTCAATGTTATTTCCTTCTCGATTAATATTGATTTTCATTTATTGGGTCTTCTACATATTTCAAACTCATAAGTGAGGAAGAATGTTAAATAATATTAAATCTACCTCCACCCATGACCCTACTTGAACAAGATTTGTTCTATAGGTTGTACAATTGTGTCCTTGAGTTCTAAACCTATCTTTACCCATCAACTTAAGCTAACTTTTAGATTAATCAGTGATTACTAGCTTTTGGATCAATTAATGATTTAAGAATTACAAAGATAAATGAGGAAATTGACCGTTTTCCACTGAATTGAAAAAGAAAATGGTTCTGCAATTTTCTTACCTCTGCTATATGCAAGTTCATTGTTAGAGTCGGATCATCATCCATCCTGGTGCTTGCTGGAGGATGTGCTCTATATTTCAAATATTCTGTTTGGTTTTTGGCAATTGCTTGTTCCCTGGTGCAGCCTTTACATTTCTCGCATGCTTTTAGCTTCTGGTTGATTTGATTTGTAAAGAACACCAGTTTAATGTGTTTCATGAACTTAGGAGCAGAAATGTCAACCATGTCAACTGCAAAGCTTTCCACCCACTTTATGTACAATGCACCATGTAAAAATCGACTCAGAAGCACCATTATCAAGTGTCCATCATCAATCAGTTCTATGAGCAACATTTCGAAATTCTTCGGCCTGAAATCCCGTCCCTCATTTAGAGCCTGTGCAATGGCAGTTTACAAGATTAAACTTGTTGAACCATCTGGGACAGAGCATGAGTTTGAAGCATCTGATGATGCATACATTCTTGATGCAGCTGAAGAAGCAGGAATAGACTTACCTTATTCTTGCAGGGCAGGTGCGTGTTCTACGTGTGCTGGGAAAATGGTTTCGGGTTCAGTTGATCAGTCGGACGGATCGTTCCTTGATGATAGTCAAATGGCAGAGGGCTATTTGTTAACCTGTGTTTCATTGCCAACTGCAGACTGTGTGATTCACACACACAAGGAAGGAGAGCTGCTATGAGTAGGATAGTGTGTTTGAGTGATACAGAGTGCCTTGTTTCATTGTTTTTATTCGTAATGTCATATTATTGAGAGAGAGAGAGTGAGTGAGAGAAATAAATCGTATGTATGAACTTTCACTTCATGCATTTTCCTTGTTATTTATTAGTAACATTATGCACGAGAAATTTTGTATAGTTTTCTTTGAACTTATGGACTTTGACATTCTGATTTTATCATAGAAAAATCACTACAAGAATATAAATA

mRNA sequence

TTTAAATCGAAATGTTAGAAAAAGAAAAAAGAAGTCAGAGATGGAGAGCTAGGTTTTATAGAGCAAAAAGAAGAGTAAGAACTAAGAAGGTTGGATCTGGGACTTCACTACCTTGCCTCTTCGGAGCTTGCAAATGGCAAATTCTCCATCCTCTTCCTCTTCTGGGCTTTCACCATGCGCCAAAAGCCATTTCTCTTCCTCTTCCCCTTTCTATATATATATATATATATCTATATTGCCCTAATTGTCGCATCATTCAGCGACTTAGGGCTTGCCTTCGATTGCGTAGCCTCGCTTTCTCCGCCGCCTCTCTCTCTTTGTAACTGAGCAGAAATGTCAACCATGTCAACTGCAAAGCTTTCCACCCACTTTATGTACAATGCACCATGTAAAAATCGACTCAGAAGCACCATTATCAAGTGTCCATCATCAATCAGTTCTATGAGCAACATTTCGAAATTCTTCGGCCTGAAATCCCGTCCCTCATTTAGAGCCTGTGCAATGGCAGTTTACAAGATTAAACTTGTTGAACCATCTGGGACAGAGCATGAGTTTGAAGCATCTGATGATGCATACATTCTTGATGCAGCTGAAGAAGCAGGAATAGACTTACCTTATTCTTGCAGGGCAGGTGCGTGTTCTACGTGTGCTGGGAAAATGGTTTCGGGTTCAGTTGATCAGTCGGACGGATCGTTCCTTGATGATAGTCAAATGGCAGAGGGCTATTTGTTAACCTGTGTTTCATTGCCAACTGCAGACTGTGTGATTCACACACACAAGGAAGGAGAGCTGCTATGAGTAGGATAGTGTGTTTGAGTGATACAGAGTGCCTTGTTTCATTGTTTTTATTCGTAATGTCATATTATTGAGAGAGAGAGAGTGAGTGAGAGAAATAAATCGTATGTATGAACTTTCACTTCATGCATTTTCCTTGTTATTTATTAGTAACATTATGCACGAGAAATTTTGTATAGTTTTCTTTGAACTTATGGACTTTGACATTCTGATTTTATCATAGAAAAATCACTACAAGAATATAAATA

Coding sequence (CDS)

ATGTCAACCATGTCAACTGCAAAGCTTTCCACCCACTTTATGTACAATGCACCATGTAAAAATCGACTCAGAAGCACCATTATCAAGTGTCCATCATCAATCAGTTCTATGAGCAACATTTCGAAATTCTTCGGCCTGAAATCCCGTCCCTCATTTAGAGCCTGTGCAATGGCAGTTTACAAGATTAAACTTGTTGAACCATCTGGGACAGAGCATGAGTTTGAAGCATCTGATGATGCATACATTCTTGATGCAGCTGAAGAAGCAGGAATAGACTTACCTTATTCTTGCAGGGCAGGTGCGTGTTCTACGTGTGCTGGGAAAATGGTTTCGGGTTCAGTTGATCAGTCGGACGGATCGTTCCTTGATGATAGTCAAATGGCAGAGGGCTATTTGTTAACCTGTGTTTCATTGCCAACTGCAGACTGTGTGATTCACACACACAAGGAAGGAGAGCTGCTATGA

Protein sequence

MSTMSTAKLSTHFMYNAPCKNRLRSTIIKCPSSISSMSNISKFFGLKSRPSFRACAMAVYKIKLVEPSGTEHEFEASDDAYILDAAEEAGIDLPYSCRAGACSTCAGKMVSGSVDQSDGSFLDDSQMAEGYLLTCVSLPTADCVIHTHKEGELL

Homology

[Close]

BLAST of Bhi08G000048 vs. Swiss-Prot
Match: sp|P27788|FER3_MAIZE (Ferredoxin-3, chloroplastic OS=Zea mays OX=4577 GN=FDX3 PE=1 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 3.1e-46
Identity = 89/128 (69.53%), Postives = 102/128 (79.69%), Query Frame = 0


Query: 26  TIIKCPSSISSMSNISKFFGLKSRPSFRACAMAVYKIKLVEPSGTEHEFEASDDAYILDA 85
           T +K PSS+S  S ++K   LK+       AMAVYK+KLV P G EHEF+A DDAYILDA
Sbjct: 24  TAVKSPSSLSFFSQVTKVPSLKTSKKLDVSAMAVYKVKLVGPEGEEHEFDAPDDAYILDA 83

Query: 86  AEEAGIDLPYSCRAGACSTCAGKMVSGSVDQSDGSFLDDSQMAEGYLLTCVSLPTADCVI 145
           AE AG++LPYSCRAGACSTCAGK+ SGSVDQSDGSFLDD Q  EGY+LTCVS P +DCVI
Sbjct: 84  AETAGVELPYSCRAGACSTCAGKIESGSVDQSDGSFLDDGQQEEGYVLTCVSYPKSDCVI 143

Query: 146 HTHKEGEL 154
           HTHKEG+L
Sbjct: 144 HTHKEGDL 151

[Close]

BLAST of Bhi08G000048 vs. Swiss-Prot
Match: sp|Q9ZQG8|FER3_ARATH (Ferredoxin-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD3 PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 7.8e-42
Identity = 89/154 (57.79%), Postives = 113/154 (73.38%), Query Frame = 0


Query: 4   MSTAKLSTHFMYNAPCKNRLRSTIIKCPS---SISSMSNISKFFGLK-SRPSFRACAMAV 63
           M+T ++S+  M  A  +++  + +I   S   S+ S   +S+ FGLK S  S  A   AV
Sbjct: 1   MATVRISSTSMTKAVLRSQTTNKLITNKSYNLSVGSTKRVSRSFGLKCSANSGGATMSAV 60

Query: 64  YKIKLVEPSGTEHEFEASDDAYILDAAEEAGIDLPYSCRAGACSTCAGKMVSGSVDQSDG 123
           YK+KL+ P G E EFE  DD YILDAAEEAG+DLPYSCRAGACSTCAG++VSG+VDQSDG
Sbjct: 61  YKVKLLGPDGQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGACSTCAGQIVSGNVDQSDG 120

Query: 124 SFLDDSQMAEGYLLTCVSLPTADCVIHTHKEGEL 154
           SFL+DS + +GY+LTCV+ P +DCVIHTHKE EL
Sbjct: 121 SFLEDSHLEKGYVLTCVAYPQSDCVIHTHKETEL 154

[Close]

BLAST of Bhi08G000048 vs. Swiss-Prot
Match: sp|P94044|FER6_MAIZE (Ferredoxin-6, chloroplastic OS=Zea mays OX=4577 GN=FDX6 PE=2 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.4e-38
Identity = 72/100 (72.00%), Postives = 86/100 (86.00%), Query Frame = 0


Query: 54  ACAMAVYKIKLVEPSGTEHEFEASDDAYILDAAEEAGIDLPYSCRAGACSTCAGKMVSGS 113
           + A  ++K+KLV P GTEHEFEA DD YIL+AAE AG++LP+SCRAG+CSTCAG+M +G 
Sbjct: 55  SAAAVLHKVKLVGPDGTEHEFEAPDDTYILEAAETAGVELPFSCRAGSCSTCAGRMSAGE 114

Query: 114 VDQSDGSFLDDSQMAEGYLLTCVSLPTADCVIHTHKEGEL 154
           VDQS+GSFLDD QMAEGYLLTC+S P ADCVIHTHKE +L
Sbjct: 115 VDQSEGSFLDDGQMAEGYLLTCISYPKADCVIHTHKEEDL 154

[Close]

BLAST of Bhi08G000048 vs. Swiss-Prot
Match: sp|O04090|FER1_ARATH (Ferredoxin-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD1 PE=1 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 1.7e-36
Identity = 82/155 (52.90%), Postives = 104/155 (67.10%), Query Frame = 0


Query: 2   STMSTAKLSTHFMYNAPCKNRLRSTIIKCPSSISSMSNISKFFGLKSRPS--FRACAMAV 61
           + +S+A +ST F+        LRS            +N    FGLKS  +   R  AMA 
Sbjct: 4   TALSSAIVSTSFLRRQQTPISLRSL---------PFANTQSLFGLKSSTARGGRVTAMAT 63

Query: 62  YKIKLVEPSGTEHEFEASDDAYILDAAEEAGIDLPYSCRAGACSTCAGKMVSGSVDQSDG 121
           YK+K + P G E E E  +D Y+LDAAEEAG+DLPYSCRAG+CS+CAGK+VSGS+DQSD 
Sbjct: 64  YKVKFITPEG-EQEVECEEDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQ 123

Query: 122 SFLDDSQMAEGYLLTCVSLPTADCVIHTHKEGELL 155
           SFLDD QM+EGY+LTCV+ PT+D VI THKE  ++
Sbjct: 124 SFLDDEQMSEGYVLTCVAYPTSDVVIETHKEEAIM 148

[Close]

BLAST of Bhi08G000048 vs. Swiss-Prot
Match: sp|P16972|FER2_ARATH (Ferredoxin-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD2 PE=1 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 4.9e-36
Identity = 83/155 (53.55%), Postives = 105/155 (67.74%), Query Frame = 0


Query: 2   STMSTAKLSTHFMYNAPCKNRLRSTIIKCPSSISSMSNISKFFGLKSRPS--FRACAMAV 61
           + +S+A + T F+  +P    LRS     PS     +N    FGLKS  +   R  AMA 
Sbjct: 4   TALSSAIVGTSFIRRSPAPISLRS----LPS-----ANTQSLFGLKSGTARGGRVTAMAT 63

Query: 62  YKIKLVEPSGTEHEFEASDDAYILDAAEEAGIDLPYSCRAGACSTCAGKMVSGSVDQSDG 121
           YK+K + P G E E E  DD Y+LDAAEEAGIDLPYSCRAG+CS+CAGK+VSGSVDQSD 
Sbjct: 64  YKVKFITPEG-ELEVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQ 123

Query: 122 SFLDDSQMAEGYLLTCVSLPTADCVIHTHKEGELL 155
           SFLDD Q+ EG++LTC + PT+D  I THKE +++
Sbjct: 124 SFLDDEQIGEGFVLTCAAYPTSDVTIETHKEEDIV 148

[Close]

BLAST of Bhi08G000048 vs. TAIR10
Match: AT2G27510.1 (ferredoxin 3)

HSP 1 Score: 171.4 bits (433), Expect = 4.3e-43
Identity = 89/154 (57.79%), Postives = 113/154 (73.38%), Query Frame = 0


Query: 4   MSTAKLSTHFMYNAPCKNRLRSTIIKCPS---SISSMSNISKFFGLK-SRPSFRACAMAV 63
           M+T ++S+  M  A  +++  + +I   S   S+ S   +S+ FGLK S  S  A   AV
Sbjct: 1   MATVRISSTSMTKAVLRSQTTNKLITNKSYNLSVGSTKRVSRSFGLKCSANSGGATMSAV 60

Query: 64  YKIKLVEPSGTEHEFEASDDAYILDAAEEAGIDLPYSCRAGACSTCAGKMVSGSVDQSDG 123
           YK+KL+ P G E EFE  DD YILDAAEEAG+DLPYSCRAGACSTCAG++VSG+VDQSDG
Sbjct: 61  YKVKLLGPDGQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGACSTCAGQIVSGNVDQSDG 120

Query: 124 SFLDDSQMAEGYLLTCVSLPTADCVIHTHKEGEL 154
           SFL+DS + +GY+LTCV+ P +DCVIHTHKE EL
Sbjct: 121 SFLEDSHLEKGYVLTCVAYPQSDCVIHTHKETEL 154

[Close]

BLAST of Bhi08G000048 vs. TAIR10
Match: AT1G10960.1 (ferredoxin 1)

HSP 1 Score: 153.7 bits (387), Expect = 9.3e-38
Identity = 82/155 (52.90%), Postives = 104/155 (67.10%), Query Frame = 0


Query: 2   STMSTAKLSTHFMYNAPCKNRLRSTIIKCPSSISSMSNISKFFGLKSRPS--FRACAMAV 61
           + +S+A +ST F+        LRS            +N    FGLKS  +   R  AMA 
Sbjct: 4   TALSSAIVSTSFLRRQQTPISLRSL---------PFANTQSLFGLKSSTARGGRVTAMAT 63

Query: 62  YKIKLVEPSGTEHEFEASDDAYILDAAEEAGIDLPYSCRAGACSTCAGKMVSGSVDQSDG 121
           YK+K + P G E E E  +D Y+LDAAEEAG+DLPYSCRAG+CS+CAGK+VSGS+DQSD 
Sbjct: 64  YKVKFITPEG-EQEVECEEDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQ 123

Query: 122 SFLDDSQMAEGYLLTCVSLPTADCVIHTHKEGELL 155
           SFLDD QM+EGY+LTCV+ PT+D VI THKE  ++
Sbjct: 124 SFLDDEQMSEGYVLTCVAYPTSDVVIETHKEEAIM 148

[Close]

BLAST of Bhi08G000048 vs. TAIR10
Match: AT1G60950.1 (2Fe-2S ferredoxin-like superfamily protein)

HSP 1 Score: 152.1 bits (383), Expect = 2.7e-37
Identity = 83/155 (53.55%), Postives = 105/155 (67.74%), Query Frame = 0


Query: 2   STMSTAKLSTHFMYNAPCKNRLRSTIIKCPSSISSMSNISKFFGLKSRPS--FRACAMAV 61
           + +S+A + T F+  +P    LRS     PS     +N    FGLKS  +   R  AMA 
Sbjct: 4   TALSSAIVGTSFIRRSPAPISLRS----LPS-----ANTQSLFGLKSGTARGGRVTAMAT 63

Query: 62  YKIKLVEPSGTEHEFEASDDAYILDAAEEAGIDLPYSCRAGACSTCAGKMVSGSVDQSDG 121
           YK+K + P G E E E  DD Y+LDAAEEAGIDLPYSCRAG+CS+CAGK+VSGSVDQSD 
Sbjct: 64  YKVKFITPEG-ELEVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQ 123

Query: 122 SFLDDSQMAEGYLLTCVSLPTADCVIHTHKEGELL 155
           SFLDD Q+ EG++LTC + PT+D  I THKE +++
Sbjct: 124 SFLDDEQIGEGFVLTCAAYPTSDVTIETHKEEDIV 148

[Close]

BLAST of Bhi08G000048 vs. TAIR10
Match: AT5G10000.1 (ferredoxin 4)

HSP 1 Score: 133.7 bits (335), Expect = 1.0e-31
Identity = 63/132 (47.73%), Postives = 93/132 (70.45%), Query Frame = 0


Query: 25  STIIKCPSSISSMSNISKFFGL-KSRPSF-RACAMAVYKIKLVEPSGTEHEFEASDDAYI 84
           S I    + +++  N + +FGL  SR +F +  A    K+KL+ P G E E E ++D  I
Sbjct: 17  SRISPSQAQLTTRLNNTTYFGLSSSRGNFGKVFAKESRKVKLISPEGEEQEIEGNEDCCI 76

Query: 85  LDAAEEAGIDLPYSCRAGACSTCAGKMVSGSVDQSDGSFLDDSQMAEGYLLTCVSLPTAD 144
           L++AE AG++LPYSCR+G C TC GK+VSG VDQS GSFL++ Q+ +GY+LTC++LP  D
Sbjct: 77  LESAENAGLELPYSCRSGTCGTCCGKLVSGKVDQSLGSFLEEEQIQKGYILTCIALPLED 136

Query: 145 CVIHTHKEGELL 155
           CV++THK+ +L+
Sbjct: 137 CVVYTHKQSDLI 148

[Close]

BLAST of Bhi08G000048 vs. TAIR10
Match: AT4G14890.1 (2Fe-2S ferredoxin-like superfamily protein)

HSP 1 Score: 84.0 bits (206), Expect = 9.1e-17
Identity = 44/95 (46.32%), Postives = 55/95 (57.89%), Query Frame = 0


Query: 60  YKIKLVEPSGTEHEFEASDDAYILDAAEEAGIDLPYSCRAGACSTCAGKMVSGSVDQSDG 119
           YK+ +VE  G   E E   D  IL  A ++G+D+PY C  G C TC  K+V+G+VDQS G
Sbjct: 53  YKV-VVEHDGKTTELEVEPDETILSKALDSGLDVPYDCNLGVCMTCPAKLVTGTVDQS-G 112

Query: 120 SFLDDSQMAEGYLLTCVSLPTADCVIHTHKEGELL 155
             L D  +  GY L C S PT+DC I    E ELL
Sbjct: 113 GMLSDDVVERGYTLLCASYPTSDCHIKMIPEEELL 145

[Close]

BLAST of Bhi08G000048 vs. TrEMBL
Match: tr|A0A0A0LY90|A0A0A0LY90_CUCSA (Ferredoxin OS=Cucumis sativus OX=3659 GN=Csa_1G163160 PE=3 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 2.1e-68
Identity = 132/154 (85.71%), Postives = 137/154 (88.96%), Query Frame = 0


Query: 1   MSTMSTAKLSTHFMYNAPCKNRLRSTIIKCPSSISSMSNISKFFGLKSRPSFRACAMAVY 60
           MSTMSTAKL THFMYN   KN+L STIIKCPSSI S  NI K FGL SRPSFRACAMA +
Sbjct: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAF 60

Query: 61  KIKLVEPSGTEHEFEASDDAYILDAAEEAGIDLPYSCRAGACSTCAGKMVSGSVDQSDGS 120
           KIKLVEP G EHEFEASDD YILDAAEEAGIDLPYSCRAGACSTCAGK+VSGSVDQSDGS
Sbjct: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGS 120

Query: 121 FLDDSQMAEGYLLTCVSLPTADCVIHTHKEGELL 155
           FLDD QMA GYLLTC+SLPTADCVIHTHKEGEL+
Sbjct: 121 FLDDDQMANGYLLTCISLPTADCVIHTHKEGELI 154

[Close]

BLAST of Bhi08G000048 vs. TrEMBL
Match: tr|A0A2P4M2V0|A0A2P4M2V0_QUESU (Ferredoxin OS=Quercus suber OX=58331 GN=CFP56_70278 PE=3 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 3.7e-57
Identity = 111/153 (72.55%), Postives = 130/153 (84.97%), Query Frame = 0


Query: 1   MSTMSTAKLSTHFMYNAPCKNRLRSTIIKCPSSISSMSNISKFFGLKSRPSFRACAMAVY 60
           MSTM++ KL +H M+    +NR  S IIKCPSS+ S+ +ISK FGLK+ PSFR  AMAVY
Sbjct: 290 MSTMTSVKLPSHCMFRNAPQNRFNSAIIKCPSSLGSVKSISKAFGLKASPSFRVSAMAVY 349

Query: 61  KIKLVEPSGTEHEFEASDDAYILDAAEEAGIDLPYSCRAGACSTCAGKMVSGSVDQSDGS 120
           KIKLV P G E+EFEA DDAYILD+AE AG++LPYSCRAGACSTCAGKMV+GSVDQSDGS
Sbjct: 350 KIKLVGPDGEENEFEAPDDAYILDSAENAGVELPYSCRAGACSTCAGKMVTGSVDQSDGS 409

Query: 121 FLDDSQMAEGYLLTCVSLPTADCVIHTHKEGEL 154
           FLD++QM EG++LTCVS PTADCVIHTHKEG+L
Sbjct: 410 FLDENQMKEGFVLTCVSYPTADCVIHTHKEGDL 442

[Close]

BLAST of Bhi08G000048 vs. TrEMBL
Match: tr|F6HHG1|F6HHG1_VITVI (Ferredoxin OS=Vitis vinifera OX=29760 GN=VIT_06s0080g00410 PE=3 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 9.2e-56
Identity = 107/150 (71.33%), Postives = 125/150 (83.33%), Query Frame = 0


Query: 4   MSTAKLSTHFMYNAPCKNRLRSTIIKCPSSISSMSNISKFFGLKSRPSFRACAMAVYKIK 63
           MST  L TH M+ +  +NR+ S  I+ PSS+ S+ +ISK FGLKS P FRA AMAVYKIK
Sbjct: 30  MSTVNLPTHCMFRSATQNRIASAFIRSPSSLGSVKSISKAFGLKSSPCFRATAMAVYKIK 89

Query: 64  LVEPSGTEHEFEASDDAYILDAAEEAGIDLPYSCRAGACSTCAGKMVSGSVDQSDGSFLD 123
           L+ P G EHEF+A DDAYILD+AE AG++LPYSCRAGACSTCAG+MVSGSVDQSDGSFLD
Sbjct: 90  LIGPEGEEHEFDAPDDAYILDSAENAGVELPYSCRAGACSTCAGQMVSGSVDQSDGSFLD 149

Query: 124 DSQMAEGYLLTCVSLPTADCVIHTHKEGEL 154
           D QM +GYLLTC+S PT+DCVIHTHKEG+L
Sbjct: 150 DKQMEKGYLLTCISYPTSDCVIHTHKEGDL 179

[Close]

BLAST of Bhi08G000048 vs. TrEMBL
Match: tr|A0A2N9INM6|A0A2N9INM6_FAGSY (Ferredoxin OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS55038 PE=3 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.2e-55
Identity = 111/153 (72.55%), Postives = 127/153 (83.01%), Query Frame = 0


Query: 1   MSTMSTAKLSTHFMYNAPCKNRLRSTIIKCPSSISSMSNISKFFGLKSRPSFRACAMAVY 60
           MSTM+  KL +H M     +NR  S IIK PSS+ S+ +ISK FGLK+ PSFRA AMAVY
Sbjct: 1   MSTMAAVKLPSHCMVRTAPQNRFNSAIIKRPSSLGSVKSISKAFGLKASPSFRASAMAVY 60

Query: 61  KIKLVEPSGTEHEFEASDDAYILDAAEEAGIDLPYSCRAGACSTCAGKMVSGSVDQSDGS 120
           KIKLV P+G E EFEA DD YILD+AE AG++LPYSCRAGACS+CAGKMVSGSVDQSDGS
Sbjct: 61  KIKLVGPNGEESEFEAPDDTYILDSAENAGVELPYSCRAGACSSCAGKMVSGSVDQSDGS 120

Query: 121 FLDDSQMAEGYLLTCVSLPTADCVIHTHKEGEL 154
           FLDD+QM EG++LTCVS PTADCVIHTHKEG+L
Sbjct: 121 FLDDNQMKEGFVLTCVSYPTADCVIHTHKEGDL 153

[Close]

BLAST of Bhi08G000048 vs. TrEMBL
Match: tr|A5B3C7|A5B3C7_VITVI (Ferredoxin OS=Vitis vinifera OX=29760 GN=VITISV_038770 PE=3 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 4.6e-55
Identity = 106/150 (70.67%), Postives = 124/150 (82.67%), Query Frame = 0


Query: 4   MSTAKLSTHFMYNAPCKNRLRSTIIKCPSSISSMSNISKFFGLKSRPSFRACAMAVYKIK 63
           MST  L TH M+ +  +N + S  I+ PSS+ S+ +ISK FGLKS P FRA AMAVYKIK
Sbjct: 1   MSTVNLPTHCMFRSATQNXIASAFIRSPSSLGSVKSISKAFGLKSSPCFRATAMAVYKIK 60

Query: 64  LVEPSGTEHEFEASDDAYILDAAEEAGIDLPYSCRAGACSTCAGKMVSGSVDQSDGSFLD 123
           L+ P G EHEF+A DDAYILD+AE AG++LPYSCRAGACSTCAG+MVSGSVDQSDGSFLD
Sbjct: 61  LIGPEGEEHEFDAPDDAYILDSAENAGVELPYSCRAGACSTCAGQMVSGSVDQSDGSFLD 120

Query: 124 DSQMAEGYLLTCVSLPTADCVIHTHKEGEL 154
           D QM +GYLLTC+S PT+DCVIHTHKEG+L
Sbjct: 121 DKQMEKGYLLTCISYPTSDCVIHTHKEGDL 150

[Close]

BLAST of Bhi08G000048 vs. NCBI nr
Match: KGN64931.1 (hypothetical protein Csa_1G163160 [Cucumis sativus])

HSP 1 Score: 267.3 bits (682), Expect = 3.2e-68
Identity = 132/154 (85.71%), Postives = 137/154 (88.96%), Query Frame = 0


Query: 1   MSTMSTAKLSTHFMYNAPCKNRLRSTIIKCPSSISSMSNISKFFGLKSRPSFRACAMAVY 60
           MSTMSTAKL THFMYN   KN+L STIIKCPSSI S  NI K FGL SRPSFRACAMA +
Sbjct: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAF 60

Query: 61  KIKLVEPSGTEHEFEASDDAYILDAAEEAGIDLPYSCRAGACSTCAGKMVSGSVDQSDGS 120
           KIKLVEP G EHEFEASDD YILDAAEEAGIDLPYSCRAGACSTCAGK+VSGSVDQSDGS
Sbjct: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGS 120

Query: 121 FLDDSQMAEGYLLTCVSLPTADCVIHTHKEGELL 155
           FLDD QMA GYLLTC+SLPTADCVIHTHKEGEL+
Sbjct: 121 FLDDDQMANGYLLTCISLPTADCVIHTHKEGELI 154

[Close]

BLAST of Bhi08G000048 vs. NCBI nr
Match: XP_022142635.1 (ferredoxin, root R-B2 [Momordica charantia])

HSP 1 Score: 266.2 bits (679), Expect = 7.1e-68
Identity = 132/154 (85.71%), Postives = 138/154 (89.61%), Query Frame = 0


Query: 1   MSTMSTAKLSTHFMYNAPCKNRLRSTIIKCPSSISSMSNISKFFGLKSRPSFRACAMAVY 60
           MSTMSTA L + F  NAPCKNR R TIIKCPSSI S SNIS+ FGLKS PSFR  AMAVY
Sbjct: 1   MSTMSTATLPSRFTLNAPCKNRYRITIIKCPSSIGSASNISRSFGLKSSPSFRTSAMAVY 60

Query: 61  KIKLVEPSGTEHEFEASDDAYILDAAEEAGIDLPYSCRAGACSTCAGKMVSGSVDQSDGS 120
           KIKLVEP G EHEFEASDD YILDAAEEAG+DLPYSCRAGACSTCAGK+VSGSVDQSDGS
Sbjct: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKVVSGSVDQSDGS 120

Query: 121 FLDDSQMAEGYLLTCVSLPTADCVIHTHKEGELL 155
           FLDD+QMAEGYLLTCVSLPTADCVIHTHKEGEL+
Sbjct: 121 FLDDTQMAEGYLLTCVSLPTADCVIHTHKEGELI 154

[Close]

BLAST of Bhi08G000048 vs. NCBI nr
Match: XP_022944833.1 (uncharacterized protein LOC111449248 isoform X2 [Cucurbita moschata])

HSP 1 Score: 253.8 bits (647), Expect = 3.7e-64
Identity = 129/156 (82.69%), Postives = 136/156 (87.18%), Query Frame = 0


Query: 1   MSTMSTAKLSTHFMYN--APCKNRLRSTIIKCPSSISSMSNISKFFGLKSRPSFRACAMA 60
           MSTMSTAKL +  M+N  APCKN+ RSTIIKCPSSI S SNISK FGLKS PS R  AMA
Sbjct: 1   MSTMSTAKLPSRTMFNTSAPCKNQFRSTIIKCPSSIGSTSNISKSFGLKSSPSSRTTAMA 60

Query: 61  VYKIKLVEPSGTEHEFEASDDAYILDAAEEAGIDLPYSCRAGACSTCAGKMVSGSVDQSD 120
           VYKIKL+EP G EHEFEASDD YILDAAEEAGIDLPYSCRAGACSTCAGK VSGSVDQSD
Sbjct: 61  VYKIKLIEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKFVSGSVDQSD 120

Query: 121 GSFLDDSQMAEGYLLTCVSLPTADCVIHTHKEGELL 155
           GSFLDDSQM EGYLLTC+S PT+DCVI THKEGEL+
Sbjct: 121 GSFLDDSQMEEGYLLTCISHPTSDCVILTHKEGELI 156

[Close]

BLAST of Bhi08G000048 vs. NCBI nr
Match: XP_023541284.1 (ferredoxin-3, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 249.2 bits (635), Expect = 9.0e-63
Identity = 127/156 (81.41%), Postives = 135/156 (86.54%), Query Frame = 0


Query: 1   MSTMSTAKLSTHFMYN--APCKNRLRSTIIKCPSSISSMSNISKFFGLKSRPSFRACAMA 60
           MSTMSTAKL +  M+N  APCKN+ RS+IIKCPSSI S SNISK FGLKS  S R  AMA
Sbjct: 41  MSTMSTAKLPSRTMFNTSAPCKNQFRSSIIKCPSSIGSTSNISKSFGLKSSSSSRTTAMA 100

Query: 61  VYKIKLVEPSGTEHEFEASDDAYILDAAEEAGIDLPYSCRAGACSTCAGKMVSGSVDQSD 120
           VYKIKL+EP G EHEFEASDD YILDAAEEAGIDLPYSCRAGACSTCAGK VSGSVDQSD
Sbjct: 101 VYKIKLIEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKFVSGSVDQSD 160

Query: 121 GSFLDDSQMAEGYLLTCVSLPTADCVIHTHKEGELL 155
           GSFLDDSQM EGYLLTC+S PT+DCVI THKEGEL+
Sbjct: 161 GSFLDDSQMEEGYLLTCISHPTSDCVILTHKEGELI 196

[Close]

BLAST of Bhi08G000048 vs. NCBI nr
Match: XP_022967109.1 (uncharacterized protein LOC111466612 [Cucurbita maxima] >XP_022967110.1 uncharacterized protein LOC111466612 [Cucurbita maxima])

HSP 1 Score: 248.4 bits (633), Expect = 1.5e-62
Identity = 127/156 (81.41%), Postives = 135/156 (86.54%), Query Frame = 0


Query: 1   MSTMSTAKLSTHFMYN--APCKNRLRSTIIKCPSSISSMSNISKFFGLKSRPSFRACAMA 60
           MSTMSTAKL +  M+N  APCKN+ RS+IIKCPSSI S SNISK FGLKS  S R  AMA
Sbjct: 1   MSTMSTAKLPSRTMFNRSAPCKNQFRSSIIKCPSSIGSTSNISKSFGLKSLHSSRTTAMA 60

Query: 61  VYKIKLVEPSGTEHEFEASDDAYILDAAEEAGIDLPYSCRAGACSTCAGKMVSGSVDQSD 120
           VYKIKL+EP G EHEFEASDD YILDAAEEAGIDLPYSCRAGACSTCAGK VSGSVDQSD
Sbjct: 61  VYKIKLIEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKFVSGSVDQSD 120

Query: 121 GSFLDDSQMAEGYLLTCVSLPTADCVIHTHKEGELL 155
           GSFLDDSQM EGYLLTC+S PT+DCVI THKEGEL+
Sbjct: 121 GSFLDDSQMEEGYLLTCISHPTSDCVILTHKEGELI 156

The following BLAST results are available for this feature:

BLAST of Bhi08G000048 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P27788\|FER3_MAIZE	3.1e-46	69.53	Ferredoxin-3, chloroplastic OS=Zea mays OX=4577 GN=FDX3 PE=1 SV=1	[more]
sp\|Q9ZQG8\|FER3_ARATH	7.8e-42	57.79	Ferredoxin-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD3 PE=1 SV=1	[more]
sp\|P94044\|FER6_MAIZE	1.4e-38	72.00	Ferredoxin-6, chloroplastic OS=Zea mays OX=4577 GN=FDX6 PE=2 SV=1	[more]
sp\|O04090\|FER1_ARATH	1.7e-36	52.90	Ferredoxin-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD1 PE=1 SV=1	[more]
sp\|P16972\|FER2_ARATH	4.9e-36	53.55	Ferredoxin-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD2 PE=1 SV=1	[more]

BLAST of Bhi08G000048 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G27510.1	4.3e-43	57.79	ferredoxin 3	[more]
AT1G10960.1	9.3e-38	52.90	ferredoxin 1	[more]
AT1G60950.1	2.7e-37	53.55	2Fe-2S ferredoxin-like superfamily protein	[more]
AT5G10000.1	1.0e-31	47.73	ferredoxin 4	[more]
AT4G14890.1	9.1e-17	46.32	2Fe-2S ferredoxin-like superfamily protein	[more]

BLAST of Bhi08G000048 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LY90\|A0A0A0LY90_CUCSA	2.1e-68	85.71	Ferredoxin OS=Cucumis sativus OX=3659 GN=Csa_1G163160 PE=3 SV=1	[more]
tr\|A0A2P4M2V0\|A0A2P4M2V0_QUESU	3.7e-57	72.55	Ferredoxin OS=Quercus suber OX=58331 GN=CFP56_70278 PE=3 SV=1	[more]
tr\|F6HHG1\|F6HHG1_VITVI	9.2e-56	71.33	Ferredoxin OS=Vitis vinifera OX=29760 GN=VIT_06s0080g00410 PE=3 SV=1	[more]
tr\|A0A2N9INM6\|A0A2N9INM6_FAGSY	1.2e-55	72.55	Ferredoxin OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS55038 PE=3 SV=1	[more]
tr\|A5B3C7\|A5B3C7_VITVI	4.6e-55	70.67	Ferredoxin OS=Vitis vinifera OX=29760 GN=VITISV_038770 PE=3 SV=1	[more]

BLAST of Bhi08G000048 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN64931.1	3.2e-68	85.71	hypothetical protein Csa_1G163160 [Cucumis sativus]	[more]
XP_022142635.1	7.1e-68	85.71	ferredoxin, root R-B2 [Momordica charantia]	[more]
XP_022944833.1	3.7e-64	82.69	uncharacterized protein LOC111449248 isoform X2 [Cucurbita moschata]	[more]
XP_023541284.1	9.0e-63	81.41	ferredoxin-3, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_022967109.1	1.5e-62	81.41	uncharacterized protein LOC111466612 [Cucurbita maxima] >XP_022967110.1 uncharac...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0051537	2 iron, 2 sulfur cluster binding
GO:0051536	iron-sulfur cluster binding
GO:0009055	electron carrier activity

Vocabulary: **Biological Process**
Term	Definition
GO:0022900	electron transport chain

Vocabulary: **INTERPRO**
Term	Definition
IPR036010	2Fe-2S_ferredoxin-like_sf
IPR006058	2Fe2S_fd_BS
IPR010241	Fd_pln
IPR001041	2Fe-2S_ferredoxin-type
IPR012675	Beta-grasp_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0022900	electron transport chain
biological_process	GO:0006412	translation
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0015934	large ribosomal subunit
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009536	plastid
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0009055	electron carrier activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0051536	iron-sulfur cluster binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi08M000048	Bhi08M000048	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012675	Beta-grasp domain superfamily	GENE3D	G3DSA:3.10.20.30		coord: 57..154 e-value: 6.4E-32 score: 111.4
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PFAM	PF00111	Fer2	coord: 66..140 e-value: 3.3E-21 score: 74.9
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PROSITE	PS51085	2FE2S_FER_2	coord: 60..151 score: 12.811
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	CDD	cd00207	fer2	coord: 65..146 e-value: 7.34723E-31 score: 107.481
IPR010241	Ferredoxin [2Fe-2S], plant	TIGRFAM	TIGR02008	TIGR02008	coord: 58..153 e-value: 2.1E-46 score: 153.7
None	No IPR available	PANTHER	PTHR43112:SF12	SUBFAMILY NOT NAMED	coord: 3..153
None	No IPR available	PANTHER	PTHR43112	FAMILY NOT NAMED	coord: 3..153
IPR006058	2Fe-2S ferredoxin, iron-sulphur binding site	PROSITE	PS00197	2FE2S_FER_1	coord: 97..105
IPR036010	2Fe-2S ferredoxin-like superfamily	SUPERFAMILY	SSF54292	2Fe-2S ferredoxin-like	coord: 55..151

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi08G000048	Csa1G163160	Cucumber (Chinese Long) v2	cuwgoB049
Bhi08G000048	MELO3C004712	Melon (DHL92) v3.5.1	mewgoB174
Bhi08G000048	ClCG01G012230	Watermelon (Charleston Gray)	wcgwgoB232
Bhi08G000048	CSPI01G14710	Wild cucumber (PI 183967)	cpiwgoB049
Bhi08G000048	Cucsa.199720	Cucumber (Gy14) v1	cgywgoB422
Bhi08G000048	CmaCh18G006570	Cucurbita maxima (Rimu)	cmawgoB0525
Bhi08G000048	CmoCh18G006650	Cucurbita moschata (Rifu)	cmowgoB0532
Bhi08G000048	Lsi03G001200	Bottle gourd (USVL1VR-Ls)	lsiwgoB337
Bhi08G000048	Cp4.1LG09g05620	Cucurbita pepo (Zucchini)	cpewgoB0050
Bhi08G000048	CsGy1G014590	Cucumber (Gy14) v2	cgybwgoB046
Bhi08G000048	MELO3C004712.2	Melon (DHL92) v3.6.1	medwgoB176
Bhi08G000048	Carg26273	Silver-seed gourd	carwgoB0000
Bhi08G000048	CsaV3_1G014830	Cucumber (Chinese Long) v3	cucwgoB051
Bhi08G000048	Cla001097	Watermelon (97103) v1	wgowmB506
Bhi08G000048	Cla97C01G011570	Watermelon (97103) v2	wgowmbB451

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi08G000048	Cucurbita maxima (Rimu)	cmawgoB0265
Bhi08G000048	Cucurbita maxima (Rimu)	cmawgoB0267
Bhi08G000048	Melon (DHL92) v3.5.1	mewgoB426
Bhi08G000048	Watermelon (97103) v1	wgowmB504
Bhi08G000048	Watermelon (97103) v1	wgowmB510