MELO3C004712.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C004712.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionFerredoxin
Locationchr12 : 11824131 .. 11826083 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATATTCGCATCATTCAACAACTTGGGTCTCCCTTTTGATTTCCTATCCTCGCTTTCTCCGCTGCCTTTCTCTTTCTGTAAGCTTCTCTTCCCCCATTTCCTTCCTTTGTTTATATGTTATTTCTATGTTTTGCTATGAAAATCTACTAATTGCTTCTCAACATATTTGATCCCTAACTATCTCCCTCATCAAAATGCCTTTTTTCCTTTTACCATTTCGCTATTTACTGTATTTCCTCATTTCCCATATTTTCTTCCCTGTTTACATCACTACCTTTATTTGTTGTTTTGGATCGTTTTAGTTAGTATCAAACTGTGCTAACTTCTGTCTTTTCAAATAAAACCTTTGGATTCTGTTGACATTTTGTTCTTAACTAATGCAACTTATCTGGGTTGGAATTGGATGGTTTTGTTTATTACTTATGGAGCTTCGAGTGAAGAGCAGATAAAGCCCTTAGGTTGCATCTTCTCATAATGCTCCATACACCAATTTGCCTCCATTAACATTGAATAGCTTTCTGCTGTGCTACCTCATGTGTTCTTTCAAGAGGCATACAAAATCACTACACCTATCATGTATTGCATTCGTTTCTCTATGCTCTGAATTTGAACACTGGATGCTTAGTTTTCACACACACACGCAAACACTCCATTACTCTTAAATGATATAAGAGTTAATTTACCTCCACCCCTTGTAAGCTTTTGAGTTAATAGGTAATTTATAACGTTACTAGAGTGGAGAGGAGATCCTATTTCAAACTCGTTCTGTGTTTTTGTTCTTTCCCAATTAGAACAGAGAGAAGATCCTATTTCAAACTTGTCCATTGTTATTTCCTTCTCAACTTGTATCGATTTCCACTTGTTGGTTCTTGTACATAATTTTAAGTTCACAACTGATAGAAGTGTTAGAATATATAATATTAAATTTATCTTCCCTCTATTAGTTTAAGCTTTTCGGTCAACTGGTTTTTTAGGAATTAAAATGGTAAATGAAGAAATTGAGCATTGTCTACTGAATTGCTGAGATAAAATGAAAAAGAAAATGGTTCTGCAATTTTCATACATCTGCCATATGGAAGTTCATAGTTAGAGTATGATCATCATTCATTCTGGTGCTTAATATTCTGTTTGATCTTTTCCACTTGCTTGTTCACTGATGCAGCCTTTATTTTTCTCACATGCTTTTGATTGATTTGATTTGTAAACAACACCAGTTTAAATGTGTTTCATGAATTTAGGAGCAGAAATGTCAACCATGTCAACTGCAAAGCTCCCTACCCACTTCATGTACAACACGCAATCTAAAAATCAACTTGGTAGCACCATCATCAAGTGTCCATCGTCAATTGGATCTACGAGAAACATTTGGAAATCCTTTGGCTTGAATTCACGTCCCTCATTCAGAGCCCGTGCAATGGCAGTTTTCAAAATTAAACTTGTCGAACCATGTGGGAAAGAGCATGAGTTTGAGGCATCTGATGATACGTACATTCTTGATGCAGCTGAAGAAGCGGGAGTAGACTTACCTTATTCTTGCAGGGCAGGTGCGTGTTCTACGTGTGCTGGGAAAATAGTTTCGGGTTCGGTCAATCAATCAGACGGGTCGTTCCTTGACGATGATCAAATGGCAAAGGGTTACTTGTTAACCTGTGTATCACTCCCAACTGCAGATTGTGTGATTCACACACACAAGGAAGAAGAACTGATCTGAGTACGATAGTTTGAATGATACAGAGTGTTTTCTTGTTTCATGGTTTTCATTTGTAATGTCATATTATTAAAAAAAATAAATAAATAAATCAAATGTGTGAACTTTCTCGTCATGCATTTTCCTTGTTATTATCATTATGCATGGGAAATTTGTATTGTTCTTTTTTTGAACTTATGGACATTCACATTCTGAAAGGTCACTAACAATTATAAATAAAATGTCATAAAACGTGATATTAGGTT

mRNA sequence

AATATTCGCATCATTCAACAACTTGGGTCTCCCTTTTGATTTCCTATCCTCGCTTTCTCCGCTGCCTTTCTCTTTCTGAGCAGAAATGTCAACCATGTCAACTGCAAAGCTCCCTACCCACTTCATGTACAACACGCAATCTAAAAATCAACTTGGTAGCACCATCATCAAGTGTCCATCGTCAATTGGATCTACGAGAAACATTTGGAAATCCTTTGGCTTGAATTCACGTCCCTCATTCAGAGCCCGTGCAATGGCAGTTTTCAAAATTAAACTTGTCGAACCATGTGGGAAAGAGCATGAGTTTGAGGCATCTGATGATACGTACATTCTTGATGCAGCTGAAGAAGCGGGAGTAGACTTACCTTATTCTTGCAGGGCAGGTGCGTGTTCTACGTGTGCTGGGAAAATAGTTTCGGGTTCGGTCAATCAATCAGACGGGTCGTTCCTTGACGATGATCAAATGGCAAAGGGTTACTTGTTAACCTGTGTATCACTCCCAACTGCAGATTGTGTGATTCACACACACAAGGAAGAAGAACTGATCTGAGTACGATAGTTTGAATGATACAGAGTGTTTTCTTGTTTCATGGTTTTCATTTGTAATGTCATATTATTAAAAAAAATAAATAAATAAATCAAATGTGTGAACTTTCTCGTCATGCATTTTCCTTGTTATTATCATTATGCATGGGAAATTTGTATTGTTCTTTTTTTGAACTTATGGACATTCACATTCTGAAAGGTCACTAACAATTATAAATAAAATGTCATAAAACGTGATATTAGGTT

Coding sequence (CDS)

ATGTCAACCATGTCAACTGCAAAGCTCCCTACCCACTTCATGTACAACACGCAATCTAAAAATCAACTTGGTAGCACCATCATCAAGTGTCCATCGTCAATTGGATCTACGAGAAACATTTGGAAATCCTTTGGCTTGAATTCACGTCCCTCATTCAGAGCCCGTGCAATGGCAGTTTTCAAAATTAAACTTGTCGAACCATGTGGGAAAGAGCATGAGTTTGAGGCATCTGATGATACGTACATTCTTGATGCAGCTGAAGAAGCGGGAGTAGACTTACCTTATTCTTGCAGGGCAGGTGCGTGTTCTACGTGTGCTGGGAAAATAGTTTCGGGTTCGGTCAATCAATCAGACGGGTCGTTCCTTGACGATGATCAAATGGCAAAGGGTTACTTGTTAACCTGTGTATCACTCCCAACTGCAGATTGTGTGATTCACACACACAAGGAAGAAGAACTGATCTGA

Protein sequence

MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNIWKSFGLNSRPSFRARAMAVFKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKIVSGSVNQSDGSFLDDDQMAKGYLLTCVSLPTADCVIHTHKEEELI
Homology
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BLAST of MELO3C004712.2 vs. NCBI nr
Match: KGN64931.1 (hypothetical protein Csa_1G163160 [Cucumis sativus])

HSP 1 Score: 298.1 bits (762), Expect = 1.7e-77
Identity = 146/154 (94.81%), Postives = 149/154 (96.75%), Query Frame = 0 

Query: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNIWKSFGLNSRPSFRARAMAVF 60
           MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNI KSFGLNSRPSFRA AMA F
Sbjct: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAF 60

Query: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKIVSGSVNQSDGS 120
           KIKLVEPCGKEHEFEASDDTYILDAAEEAG+DLPYSCRAGACSTCAGKIVSGSV+QSDGS
Sbjct: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGS 120

Query: 121 FLDDDQMAKGYLLTCVSLPTADCVIHTHKEEELI 155
           FLDDDQMA GYLLTC+SLPTADCVIHTHKE ELI
Sbjct: 121 FLDDDQMANGYLLTCISLPTADCVIHTHKEGELI 154

[Close]
BLAST of MELO3C004712.2 vs. NCBI nr
Match: XP_022142635.1 (ferredoxin, root R-B2 [Momordica charantia])

HSP 1 Score: 258.1 bits (658), Expect = 1.9e-65
Identity = 128/154 (83.12%), Postives = 135/154 (87.66%), Query Frame = 0 

Query: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNIWKSFGLNSRPSFRARAMAVF 60
           MSTMSTA LP+ F  N   KN+   TIIKCPSSIGS  NI +SFGL S PSFR  AMAV+
Sbjct: 1   MSTMSTATLPSRFTLNAPCKNRYRITIIKCPSSIGSASNISRSFGLKSSPSFRTSAMAVY 60

Query: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKIVSGSVNQSDGS 120
           KIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGK+VSGSV+QSDGS
Sbjct: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKVVSGSVDQSDGS 120

Query: 121 FLDDDQMAKGYLLTCVSLPTADCVIHTHKEEELI 155
           FLDD QMA+GYLLTCVSLPTADCVIHTHKE ELI
Sbjct: 121 FLDDTQMAEGYLLTCVSLPTADCVIHTHKEGELI 154

[Close]
BLAST of MELO3C004712.2 vs. NCBI nr
Match: XP_022944833.1 (uncharacterized protein LOC111449248 isoform X2 [Cucurbita moschata])

HSP 1 Score: 251.5 bits (641), Expect = 1.8e-63
Identity = 126/156 (80.77%), Postives = 136/156 (87.18%), Query Frame = 0 

Query: 1   MSTMSTAKLPTHFMYNTQS--KNQLGSTIIKCPSSIGSTRNIWKSFGLNSRPSFRARAMA 60
           MSTMSTAKLP+  M+NT +  KNQ  STIIKCPSSIGST NI KSFGL S PS R  AMA
Sbjct: 1   MSTMSTAKLPSRTMFNTSAPCKNQFRSTIIKCPSSIGSTSNISKSFGLKSSPSSRTTAMA 60

Query: 61  VFKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKIVSGSVNQSD 120
           V+KIKL+EPCGKEHEFEASDDTYILDAAEEAG+DLPYSCRAGACSTCAGK VSGSV+QSD
Sbjct: 61  VYKIKLIEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKFVSGSVDQSD 120

Query: 121 GSFLDDDQMAKGYLLTCVSLPTADCVIHTHKEEELI 155
           GSFLDD QM +GYLLTC+S PT+DCVI THKE ELI
Sbjct: 121 GSFLDDSQMEEGYLLTCISHPTSDCVILTHKEGELI 156

[Close]
BLAST of MELO3C004712.2 vs. NCBI nr
Match: XP_023541284.1 (ferredoxin-3, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 246.9 bits (629), Expect = 4.5e-62
Identity = 124/156 (79.49%), Postives = 135/156 (86.54%), Query Frame = 0 

Query: 1   MSTMSTAKLPTHFMYNTQS--KNQLGSTIIKCPSSIGSTRNIWKSFGLNSRPSFRARAMA 60
           MSTMSTAKLP+  M+NT +  KNQ  S+IIKCPSSIGST NI KSFGL S  S R  AMA
Sbjct: 41  MSTMSTAKLPSRTMFNTSAPCKNQFRSSIIKCPSSIGSTSNISKSFGLKSSSSSRTTAMA 100

Query: 61  VFKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKIVSGSVNQSD 120
           V+KIKL+EPCGKEHEFEASDDTYILDAAEEAG+DLPYSCRAGACSTCAGK VSGSV+QSD
Sbjct: 101 VYKIKLIEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKFVSGSVDQSD 160

Query: 121 GSFLDDDQMAKGYLLTCVSLPTADCVIHTHKEEELI 155
           GSFLDD QM +GYLLTC+S PT+DCVI THKE ELI
Sbjct: 161 GSFLDDSQMEEGYLLTCISHPTSDCVILTHKEGELI 196

[Close]
BLAST of MELO3C004712.2 vs. NCBI nr
Match: XP_022967109.1 (uncharacterized protein LOC111466612 [Cucurbita maxima] >XP_022967110.1 uncharacterized protein LOC111466612 [Cucurbita maxima])

HSP 1 Score: 243.8 bits (621), Expect = 3.8e-61
Identity = 123/156 (78.85%), Postives = 134/156 (85.90%), Query Frame = 0 

Query: 1   MSTMSTAKLPTHFMYNTQS--KNQLGSTIIKCPSSIGSTRNIWKSFGLNSRPSFRARAMA 60
           MSTMSTAKLP+  M+N  +  KNQ  S+IIKCPSSIGST NI KSFGL S  S R  AMA
Sbjct: 1   MSTMSTAKLPSRTMFNRSAPCKNQFRSSIIKCPSSIGSTSNISKSFGLKSLHSSRTTAMA 60

Query: 61  VFKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKIVSGSVNQSD 120
           V+KIKL+EPCGKEHEFEASDDTYILDAAEEAG+DLPYSCRAGACSTCAGK VSGSV+QSD
Sbjct: 61  VYKIKLIEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKFVSGSVDQSD 120

Query: 121 GSFLDDDQMAKGYLLTCVSLPTADCVIHTHKEEELI 155
           GSFLDD QM +GYLLTC+S PT+DCVI THKE ELI
Sbjct: 121 GSFLDDSQMEEGYLLTCISHPTSDCVILTHKEGELI 156

[Close]
BLAST of MELO3C004712.2 vs. TAIR10
Match: AT2G27510.1 (ferredoxin 3)

HSP 1 Score: 172.2 bits (435), Expect = 2.5e-43
Identity = 89/154 (57.79%), Postives = 113/154 (73.38%), Query Frame = 0 

Query: 4   MSTAKLPTHFMYNTQSKNQLGSTIIKCPS---SIGSTRNIWKSFGLN-SRPSFRARAMAV 63
           M+T ++ +  M     ++Q  + +I   S   S+GST+ + +SFGL  S  S  A   AV
Sbjct: 1   MATVRISSTSMTKAVLRSQTTNKLITNKSYNLSVGSTKRVSRSFGLKCSANSGGATMSAV 60

Query: 64  FKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKIVSGSVNQSDG 123
           +K+KL+ P G+E EFE  DD YILDAAEEAGVDLPYSCRAGACSTCAG+IVSG+V+QSDG
Sbjct: 61  YKVKLLGPDGQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGACSTCAGQIVSGNVDQSDG 120

Query: 124 SFLDDDQMAKGYLLTCVSLPTADCVIHTHKEEEL 154
           SFL+D  + KGY+LTCV+ P +DCVIHTHKE EL
Sbjct: 121 SFLEDSHLEKGYVLTCVAYPQSDCVIHTHKETEL 154

[Close]
BLAST of MELO3C004712.2 vs. TAIR10
Match: AT1G10960.1 (ferredoxin 1)

HSP 1 Score: 146.4 bits (368), Expect = 1.5e-35
Identity = 78/155 (50.32%), Postives = 108/155 (69.68%), Query Frame = 0 

Query: 2   STMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNIWKSFGLNSRPS--FRARAMAV 61
           + +S+A + T F+   Q+   L S          +T+++   FGL S  +   R  AMA 
Sbjct: 4   TALSSAIVSTSFLRRQQTPISLRSL------PFANTQSL---FGLKSSTARGGRVTAMAT 63

Query: 62  FKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKIVSGSVNQSDG 121
           +K+K + P G E E E  +D Y+LDAAEEAG+DLPYSCRAG+CS+CAGK+VSGS++QSD 
Sbjct: 64  YKVKFITPEG-EQEVECEEDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQ 123

Query: 122 SFLDDDQMAKGYLLTCVSLPTADCVIHTHKEEELI 155
           SFLDD+QM++GY+LTCV+ PT+D VI THKEE ++
Sbjct: 124 SFLDDEQMSEGYVLTCVAYPTSDVVIETHKEEAIM 148

[Close]
BLAST of MELO3C004712.2 vs. TAIR10
Match: AT1G60950.1 (2Fe-2S ferredoxin-like superfamily protein)

HSP 1 Score: 143.7 bits (361), Expect = 9.7e-35
Identity = 74/139 (53.24%), Postives = 100/139 (71.94%), Query Frame = 0 

Query: 23  LGSTIIK---CPSSIGS--TRNIWKSFGLNSRPS--FRARAMAVFKIKLVEPCGKEHEFE 82
           +G++ I+    P S+ S  + N    FGL S  +   R  AMA +K+K + P G E E E
Sbjct: 11  VGTSFIRRSPAPISLRSLPSANTQSLFGLKSGTARGGRVTAMATYKVKFITPEG-ELEVE 70

Query: 83  ASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKIVSGSVNQSDGSFLDDDQMAKGYLLTC 142
             DD Y+LDAAEEAG+DLPYSCRAG+CS+CAGK+VSGSV+QSD SFLDD+Q+ +G++LTC
Sbjct: 71  CDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSFLDDEQIGEGFVLTC 130

Query: 143 VSLPTADCVIHTHKEEELI 155
            + PT+D  I THKEE+++
Sbjct: 131 AAYPTSDVTIETHKEEDIV 148

[Close]
BLAST of MELO3C004712.2 vs. TAIR10
Match: AT5G10000.1 (ferredoxin 4)

HSP 1 Score: 131.0 bits (328), Expect = 6.5e-31
Identity = 61/113 (53.98%), Postives = 87/113 (76.99%), Query Frame = 0 

Query: 44  FGL-NSRPSF-RARAMAVFKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGA 103
           FGL +SR +F +  A    K+KL+ P G+E E E ++D  IL++AE AG++LPYSCR+G 
Sbjct: 36  FGLSSSRGNFGKVFAKESRKVKLISPEGEEQEIEGNEDCCILESAENAGLELPYSCRSGT 95

Query: 104 CSTCAGKIVSGSVNQSDGSFLDDDQMAKGYLLTCVSLPTADCVIHTHKEEELI 155
           C TC GK+VSG V+QS GSFL+++Q+ KGY+LTC++LP  DCV++THK+ +LI
Sbjct: 96  CGTCCGKLVSGKVDQSLGSFLEEEQIQKGYILTCIALPLEDCVVYTHKQSDLI 148

[Close]
BLAST of MELO3C004712.2 vs. TAIR10
Match: AT4G14890.1 (2Fe-2S ferredoxin-like superfamily protein)

HSP 1 Score: 87.4 bits (215), Expect = 8.2e-18
Identity = 57/150 (38.00%), Postives = 79/150 (52.67%), Query Frame = 0 

Query: 5   STAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNIWKSFGLNSRPSFRARAMAVFKIKL 64
           ST  LP  ++ N+ S     +T+        ST    ++F    R   RA     +K+ +
Sbjct: 11  STISLPKPYLSNSFSFPLRNATL--------STTTNRRNFLTTGRIIARA-----YKV-V 70

Query: 65  VEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKIVSGSVNQSDGSFLDD 124
           VE  GK  E E   D  IL  A ++G+D+PY C  G C TC  K+V+G+V+QS G  L D
Sbjct: 71  VEHDGKTTELEVEPDETILSKALDSGLDVPYDCNLGVCMTCPAKLVTGTVDQS-GGMLSD 130

Query: 125 DQMAKGYLLTCVSLPTADCVIHTHKEEELI 155
           D + +GY L C S PT+DC I    EEEL+
Sbjct: 131 DVVERGYTLLCASYPTSDCHIKMIPEEELL 145

[Close]
BLAST of MELO3C004712.2 vs. Swiss-Prot
Match: sp|P27788|FER3_MAIZE (Ferredoxin-3, chloroplastic OS=Zea mays OX=4577 GN=FDX3 PE=1 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 3.5e-42
Identity = 84/132 (63.64%), Postives = 98/132 (74.24%), Query Frame = 0 

Query: 22  QLGSTIIKCPSSIGSTRNIWKSFGLNSRPSFRARAMAVFKIKLVEPCGKEHEFEASDDTY 81
           Q   T +K PSS+     + K   L +       AMAV+K+KLV P G+EHEF+A DD Y
Sbjct: 20  QASQTAVKSPSSLSFFSQVTKVPSLKTSKKLDVSAMAVYKVKLVGPEGEEHEFDAPDDAY 79

Query: 82  ILDAAEEAGVDLPYSCRAGACSTCAGKIVSGSVNQSDGSFLDDDQMAKGYLLTCVSLPTA 141
           ILDAAE AGV+LPYSCRAGACSTCAGKI SGSV+QSDGSFLDD Q  +GY+LTCVS P +
Sbjct: 80  ILDAAETAGVELPYSCRAGACSTCAGKIESGSVDQSDGSFLDDGQQEEGYVLTCVSYPKS 139

Query: 142 DCVIHTHKEEEL 154
           DCVIHTHKE +L
Sbjct: 140 DCVIHTHKEGDL 151

[Close]
BLAST of MELO3C004712.2 vs. Swiss-Prot
Match: sp|Q9ZQG8|FER3_ARATH (Ferredoxin-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD3 PE=1 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 4.6e-42
Identity = 89/154 (57.79%), Postives = 113/154 (73.38%), Query Frame = 0 

Query: 4   MSTAKLPTHFMYNTQSKNQLGSTIIKCPS---SIGSTRNIWKSFGLN-SRPSFRARAMAV 63
           M+T ++ +  M     ++Q  + +I   S   S+GST+ + +SFGL  S  S  A   AV
Sbjct: 1   MATVRISSTSMTKAVLRSQTTNKLITNKSYNLSVGSTKRVSRSFGLKCSANSGGATMSAV 60

Query: 64  FKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKIVSGSVNQSDG 123
           +K+KL+ P G+E EFE  DD YILDAAEEAGVDLPYSCRAGACSTCAG+IVSG+V+QSDG
Sbjct: 61  YKVKLLGPDGQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGACSTCAGQIVSGNVDQSDG 120

Query: 124 SFLDDDQMAKGYLLTCVSLPTADCVIHTHKEEEL 154
           SFL+D  + KGY+LTCV+ P +DCVIHTHKE EL
Sbjct: 121 SFLEDSHLEKGYVLTCVAYPQSDCVIHTHKETEL 154

[Close]
BLAST of MELO3C004712.2 vs. Swiss-Prot
Match: sp|P94044|FER6_MAIZE (Ferredoxin-6, chloroplastic OS=Zea mays OX=4577 GN=FDX6 PE=2 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 4.0e-38
Identity = 84/154 (54.55%), Postives = 103/154 (66.88%), Query Frame = 0 

Query: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNIWKSFGLNSRPSFRARAMAVF 60
           MST +  +LP      +       +      S  G  R   ++ G      F A A AV 
Sbjct: 1   MSTATAPRLPAPRSGASYHYQTTAAPAANTLSFAGHARQAARASGPRLSSRFVASAAAVL 60

Query: 61  -KIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKIVSGSVNQSDG 120
            K+KLV P G EHEFEA DDTYIL+AAE AGV+LP+SCRAG+CSTCAG++ +G V+QS+G
Sbjct: 61  HKVKLVGPDGTEHEFEAPDDTYILEAAETAGVELPFSCRAGSCSTCAGRMSAGEVDQSEG 120

Query: 121 SFLDDDQMAKGYLLTCVSLPTADCVIHTHKEEEL 154
           SFLDD QMA+GYLLTC+S P ADCVIHTHKEE+L
Sbjct: 121 SFLDDGQMAEGYLLTCISYPKADCVIHTHKEEDL 154

[Close]
BLAST of MELO3C004712.2 vs. Swiss-Prot
Match: sp|P14937|FER2_RAPSA (Ferredoxin, root R-B2 OS=Raphanus sativus OX=3726 PE=1 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 2.2e-36
Identity = 69/96 (71.88%), Postives = 83/96 (86.46%), Query Frame = 0 

Query: 58  AVFKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKIVSGSVNQS 117
           AV+K+KL+ P G+E+EFE  DD +ILDAAEEAGVDLPYSCRAGACSTCAG+IV G V+QS
Sbjct: 2   AVYKVKLIGPEGEENEFEVQDDQFILDAAEEAGVDLPYSCRAGACSTCAGQIVKGQVDQS 61

Query: 118 DGSFLDDDQMAKGYLLTCVSLPTADCVIHTHKEEEL 154
           +GSFL+DD   KG++LTCV+ P +DCVIHTHKE EL
Sbjct: 62  EGSFLEDDHFEKGFVLTCVAYPQSDCVIHTHKETEL 97

[Close]
BLAST of MELO3C004712.2 vs. Swiss-Prot
Match: sp|O04683|FER1_MESCR (Ferredoxin-1, chloroplastic OS=Mesembryanthemum crystallinum OX=3544 PE=2 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 6.4e-36
Identity = 75/111 (67.57%), Postives = 87/111 (78.38%), Query Frame = 0 

Query: 44  FGLNSRPS-FRARAMAVFKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGAC 103
           FGL S  S  R  AMA +K+ LV P GK+ E E  DD YILDAAEEAG+DLPYSCRAG+C
Sbjct: 37  FGLKSSASRGRVTAMAAYKVTLVTPEGKQ-ELECPDDVYILDAAEEAGIDLPYSCRAGSC 96

Query: 104 STCAGKIVSGSVNQSDGSFLDDDQMAKGYLLTCVSLPTADCVIHTHKEEEL 154
           S+CAGK+ SGSVNQ DGSFLDDDQ+ +G++LTCV+ PT D  I THKEEEL
Sbjct: 97  SSCAGKVTSGSVNQDDGSFLDDDQIKEGWVLTCVAYPTGDVTIETHKEEEL 146

[Close]
BLAST of MELO3C004712.2 vs. TrEMBL
Match: tr|A0A0A0LY90|A0A0A0LY90_CUCSA (Ferredoxin OS=Cucumis sativus OX=3659 GN=Csa_1G163160 PE=3 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 1.1e-77
Identity = 146/154 (94.81%), Postives = 149/154 (96.75%), Query Frame = 0 

Query: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNIWKSFGLNSRPSFRARAMAVF 60
           MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNI KSFGLNSRPSFRA AMA F
Sbjct: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAF 60

Query: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKIVSGSVNQSDGS 120
           KIKLVEPCGKEHEFEASDDTYILDAAEEAG+DLPYSCRAGACSTCAGKIVSGSV+QSDGS
Sbjct: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGS 120

Query: 121 FLDDDQMAKGYLLTCVSLPTADCVIHTHKEEELI 155
           FLDDDQMA GYLLTC+SLPTADCVIHTHKE ELI
Sbjct: 121 FLDDDQMANGYLLTCISLPTADCVIHTHKEGELI 154

[Close]
BLAST of MELO3C004712.2 vs. TrEMBL
Match: tr|A0A2P4M2V0|A0A2P4M2V0_QUESU (Ferredoxin OS=Quercus suber OX=58331 GN=CFP56_70278 PE=3 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 4.6e-55
Identity = 105/153 (68.63%), Postives = 130/153 (84.97%), Query Frame = 0 

Query: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNIWKSFGLNSRPSFRARAMAVF 60
           MSTM++ KLP+H M+    +N+  S IIKCPSS+GS ++I K+FGL + PSFR  AMAV+
Sbjct: 290 MSTMTSVKLPSHCMFRNAPQNRFNSAIIKCPSSLGSVKSISKAFGLKASPSFRVSAMAVY 349

Query: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKIVSGSVNQSDGS 120
           KIKLV P G+E+EFEA DD YILD+AE AGV+LPYSCRAGACSTCAGK+V+GSV+QSDGS
Sbjct: 350 KIKLVGPDGEENEFEAPDDAYILDSAENAGVELPYSCRAGACSTCAGKMVTGSVDQSDGS 409

Query: 121 FLDDDQMAKGYLLTCVSLPTADCVIHTHKEEEL 154
           FLD++QM +G++LTCVS PTADCVIHTHKE +L
Sbjct: 410 FLDENQMKEGFVLTCVSYPTADCVIHTHKEGDL 442

[Close]
BLAST of MELO3C004712.2 vs. TrEMBL
Match: tr|A0A2N9INM6|A0A2N9INM6_FAGSY (Ferredoxin OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS55038 PE=3 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 7.8e-55
Identity = 108/153 (70.59%), Postives = 129/153 (84.31%), Query Frame = 0 

Query: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNIWKSFGLNSRPSFRARAMAVF 60
           MSTM+  KLP+H M  T  +N+  S IIK PSS+GS ++I K+FGL + PSFRA AMAV+
Sbjct: 1   MSTMAAVKLPSHCMVRTAPQNRFNSAIIKRPSSLGSVKSISKAFGLKASPSFRASAMAVY 60

Query: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKIVSGSVNQSDGS 120
           KIKLV P G+E EFEA DDTYILD+AE AGV+LPYSCRAGACS+CAGK+VSGSV+QSDGS
Sbjct: 61  KIKLVGPNGEESEFEAPDDTYILDSAENAGVELPYSCRAGACSSCAGKMVSGSVDQSDGS 120

Query: 121 FLDDDQMAKGYLLTCVSLPTADCVIHTHKEEEL 154
           FLDD+QM +G++LTCVS PTADCVIHTHKE +L
Sbjct: 121 FLDDNQMKEGFVLTCVSYPTADCVIHTHKEGDL 153

[Close]
BLAST of MELO3C004712.2 vs. TrEMBL
Match: tr|F6HHG1|F6HHG1_VITVI (Ferredoxin OS=Vitis vinifera OX=29760 GN=VIT_06s0080g00410 PE=3 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 2.3e-54
Identity = 103/150 (68.67%), Postives = 126/150 (84.00%), Query Frame = 0 

Query: 4   MSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNIWKSFGLNSRPSFRARAMAVFKIK 63
           MST  LPTH M+ + ++N++ S  I+ PSS+GS ++I K+FGL S P FRA AMAV+KIK
Sbjct: 30  MSTVNLPTHCMFRSATQNRIASAFIRSPSSLGSVKSISKAFGLKSSPCFRATAMAVYKIK 89

Query: 64  LVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKIVSGSVNQSDGSFLD 123
           L+ P G+EHEF+A DD YILD+AE AGV+LPYSCRAGACSTCAG++VSGSV+QSDGSFLD
Sbjct: 90  LIGPEGEEHEFDAPDDAYILDSAENAGVELPYSCRAGACSTCAGQMVSGSVDQSDGSFLD 149

Query: 124 DDQMAKGYLLTCVSLPTADCVIHTHKEEEL 154
           D QM KGYLLTC+S PT+DCVIHTHKE +L
Sbjct: 150 DKQMEKGYLLTCISYPTSDCVIHTHKEGDL 179

[Close]
BLAST of MELO3C004712.2 vs. TrEMBL
Match: tr|A5B3C7|A5B3C7_VITVI (Ferredoxin OS=Vitis vinifera OX=29760 GN=VITISV_038770 PE=3 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 3.9e-54
Identity = 103/150 (68.67%), Postives = 125/150 (83.33%), Query Frame = 0 

Query: 4   MSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNIWKSFGLNSRPSFRARAMAVFKIK 63
           MST  LPTH M+ + ++N + S  I+ PSS+GS ++I K+FGL S P FRA AMAV+KIK
Sbjct: 1   MSTVNLPTHCMFRSATQNXIASAFIRSPSSLGSVKSISKAFGLKSSPCFRATAMAVYKIK 60

Query: 64  LVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKIVSGSVNQSDGSFLD 123
           L+ P G+EHEF+A DD YILD+AE AGV+LPYSCRAGACSTCAG++VSGSV+QSDGSFLD
Sbjct: 61  LIGPEGEEHEFDAPDDAYILDSAENAGVELPYSCRAGACSTCAGQMVSGSVDQSDGSFLD 120

Query: 124 DDQMAKGYLLTCVSLPTADCVIHTHKEEEL 154
           D QM KGYLLTC+S PT+DCVIHTHKE +L
Sbjct: 121 DKQMEKGYLLTCISYPTSDCVIHTHKEGDL 150

The following BLAST results are available for this feature:
BLAST of MELO3C004712.2 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN64931.11.7e-7794.81hypothetical protein Csa_1G163160 [Cucumis sativus][more]
XP_022142635.11.9e-6583.12ferredoxin, root R-B2 [Momordica charantia][more]
XP_022944833.11.8e-6380.77uncharacterized protein LOC111449248 isoform X2 [Cucurbita moschata][more]
XP_023541284.14.5e-6279.49ferredoxin-3, chloroplastic [Cucurbita pepo subsp. pepo][more]
XP_022967109.13.8e-6178.85uncharacterized protein LOC111466612 [Cucurbita maxima] >XP_022967110.1 uncharac... [more]
BLAST of MELO3C004712.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G27510.12.5e-4357.79ferredoxin 3[more]
AT1G10960.11.5e-3550.32ferredoxin 1[more]
AT1G60950.19.7e-3553.242Fe-2S ferredoxin-like superfamily protein[more]
AT5G10000.16.5e-3153.98ferredoxin 4[more]
AT4G14890.18.2e-1838.002Fe-2S ferredoxin-like superfamily protein[more]
BLAST of MELO3C004712.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P27788|FER3_MAIZE3.5e-4263.64Ferredoxin-3, chloroplastic OS=Zea mays OX=4577 GN=FDX3 PE=1 SV=1[more]
sp|Q9ZQG8|FER3_ARATH4.6e-4257.79Ferredoxin-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD3 PE=1 SV=1[more]
sp|P94044|FER6_MAIZE4.0e-3854.55Ferredoxin-6, chloroplastic OS=Zea mays OX=4577 GN=FDX6 PE=2 SV=1[more]
sp|P14937|FER2_RAPSA2.2e-3671.88Ferredoxin, root R-B2 OS=Raphanus sativus OX=3726 PE=1 SV=1[more]
sp|O04683|FER1_MESCR6.4e-3667.57Ferredoxin-1, chloroplastic OS=Mesembryanthemum crystallinum OX=3544 PE=2 SV=1[more]
BLAST of MELO3C004712.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LY90|A0A0A0LY90_CUCSA1.1e-7794.81Ferredoxin OS=Cucumis sativus OX=3659 GN=Csa_1G163160 PE=3 SV=1[more]
tr|A0A2P4M2V0|A0A2P4M2V0_QUESU4.6e-5568.63Ferredoxin OS=Quercus suber OX=58331 GN=CFP56_70278 PE=3 SV=1[more]
tr|A0A2N9INM6|A0A2N9INM6_FAGSY7.8e-5570.59Ferredoxin OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS55038 PE=3 SV=1[more]
tr|F6HHG1|F6HHG1_VITVI2.3e-5468.67Ferredoxin OS=Vitis vinifera OX=29760 GN=VIT_06s0080g00410 PE=3 SV=1[more]
tr|A5B3C7|A5B3C7_VITVI3.9e-5468.67Ferredoxin OS=Vitis vinifera OX=29760 GN=VITISV_038770 PE=3 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0051536iron-sulfur cluster binding
GO:00515372 iron, 2 sulfur cluster binding
GO:0009055electron carrier activity
Vocabulary: Biological Process
TermDefinition
GO:0022900electron transport chain
Vocabulary: INTERPRO
TermDefinition
IPR0360102Fe-2S_ferredoxin-like_sf
IPR0060582Fe2S_fd_BS
IPR012675Beta-grasp_dom_sf
IPR0010412Fe-2S_ferredoxin-type
IPR010241Fd_pln
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0022900 electron transport chain
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0009507 chloroplast
cellular_component GO:0009536 plastid
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0051537 2 iron, 2 sulfur cluster binding
molecular_function GO:0009055 electron carrier activity
molecular_function GO:0051536 iron-sulfur cluster binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003723 RNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C004712.2.1MELO3C004712.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010241Ferredoxin [2Fe-2S], plantTIGRFAMTIGR02008TIGR02008coord: 59..154
e-value: 8.0E-47
score: 155.0
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPFAMPF00111Fer2coord: 66..140
e-value: 4.8E-22
score: 77.6
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPROSITEPS510852FE2S_FER_2coord: 60..151
score: 12.767
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainCDDcd00207fer2coord: 65..146
e-value: 2.15851E-32
score: 111.333
IPR012675Beta-grasp domain superfamilyGENE3DG3DSA:3.10.20.30coord: 57..154
e-value: 3.5E-32
score: 112.2
NoneNo IPR availablePANTHERPTHR43112FAMILY NOT NAMEDcoord: 3..153
NoneNo IPR availablePANTHERPTHR43112:SF12SUBFAMILY NOT NAMEDcoord: 3..153
IPR0060582Fe-2S ferredoxin, iron-sulphur binding sitePROSITEPS001972FE2S_FER_1coord: 97..105
IPR0360102Fe-2S ferredoxin-like superfamilySUPERFAMILYSSF542922Fe-2S ferredoxin-likecoord: 49..152

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C004712.2Csa1G163160Cucumber (Chinese Long) v2cumedB010
MELO3C004712.2CSPI01G14710Wild cucumber (PI 183967)cpimedB011
MELO3C004712.2Cucsa.199720Cucumber (Gy14) v1cgymedB361
MELO3C004712.2CmoCh18G006650Cucurbita moschata (Rifu)cmomedB400
MELO3C004712.2Lsi03G001200Bottle gourd (USVL1VR-Ls)lsimedB255
MELO3C004712.2Cp4.1LG09g05620Cucurbita pepo (Zucchini)cpemedB033
MELO3C004712.2CsGy1G014590Cucumber (Gy14) v2cgybmedB009
MELO3C004712.2ClCG01G012230Watermelon (Charleston Gray)medwcgB133
MELO3C004712.2Cla97C01G011570Watermelon (97103) v2medwmbB132
MELO3C004712.2Bhi08G000048Wax gourdmedwgoB176
MELO3C004712.2Carg26273Silver-seed gourdcarmedB0000
MELO3C004712.2CsaV3_1G014830Cucumber (Chinese Long) v3cucmedB009
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C004712.2Cucurbita maxima (Rimu)cmamedB425
MELO3C004712.2Watermelon (97103) v1medwmB167