CsaV3_1G014830 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G014830
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionFerredoxin
Locationchr1 : 10470639 .. 10474142 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTTTCTTAAAATGACTAAAAGTGTCTAGATTTTAGTTTTTAAACTTGAAGACATTTTGAGACAATCTTAGCCCGAGATGCTAATACGTATTGCTTATGTTCTTTAGTTCAATGCTATCTTATGGCATCCGGAGGCAATGTTGTTTAGATGGTTTCCATGATTGAATTAGTTTTTTTTTTAAAAAAAGTCACAAATGGGTAGCCGCCTGACCTACCTTTTTATAGAGCATAAAAAGGAAGAAGCATAAGATGTAAGGAACTTGGATCTGCTACTTCACTCTCCGCCTCTTCGAACCTCGCAAATGGCAAATTCTCCATTCATCCCCCCTCTTCCCTCTTCCTCCTCTGGGCCTTCACCATTCTCCAAAAGCCATTTTTCTTCCTCTTTCTTTATATATATTCTATATATATATATATATATTGCCCTAATATTCGCATCCTTCAACCACTTACGTCTCCCTTTTGATTTCCTGTCCTTGCTTTCTCCGCTGCCTCTCTCTTTCTGTAAGCTTCTCTTCCCCCATTTCCTTCCTTCGTTTATATGTTCTTTCTATCTTTTGCTATGAAAATCAACTAATTTGCTTCTCAACATATTTGTTCTCTAACCATCTCCCTCATCAAAATGCCCTTTTCCTTTTACCATTTCGCTATTTACTGTATTTCCTCATTTCCCATATTCTCTTCTCTTTTTACATCACTGCCTTTATTTTTGTTGCTTTCGATCGTTTTAGTTAGATAATATCAATCTGTGCTAACTTCTGTTTCTTCAAATAAAACCTTTGGATTCTGTTGACATTTTGTTCTTAACTAATGCAACTGATCTGGGTTGGAATTGAATGGTTTTGTTCATTACTTATGGAGCTTCGAGTGAAGAGCAGATAAAGCCCTTAGGTTGCATCTTCTCATAATGCTCCATACACCAATTTGCCTCCATTAACATTGAATAGCTTTCTGCTGTGCTACCTCATTTGTTCTTTCAAGAGGCATACAAAATCACTGAACCTATCATTTATTGCATTCGTTTCTCTATGCTCTGAATTGAAACACTCGATGCTTAGTTTTCACACACACGCAAATACTCCATTGCTGTTAAATGATACAACAGTTAATTTACTCTTAAGCTTAAGCATTTGAGTCAATAGGTGTTTTATAACGTTGCTGGAGCAGAGAGCAGATCCTATTTCAAACTCGTCCATTGTTATTTCCTTCTCAATTTACATCGATGTCGATTTCTATTTGTTGGTTCTTCTAAAATTAGAAGATATAATATTAAGTTTACCTTCCCTCCATTAGTTTAAGCTTTTGGGTCAATTGGTGTTTTAAGAATTAGAAAGGTAAATGAAGAAATCAAGTATTTTCTGCTGAATTGTGAGATAAAATGAAAAAGAAAATGGTTCTGCATTTTTCATACCTCTGCCATATGGAGGTTCATTGTTAGAGTATGATCATCATCCATTCTGGTGCTTGTTGGATGTGCTCTATATTCTAAATATTCTGTTTGATCTTTTGTTACTTGCTTGTTCCCCGGTGTAGCCTTTATTTTTCTCACATGCTTTTAGGTTTTGATTGATTTGATTTGTAAACCACACCCGTTTAAATGTGTTTCATGAATTTAGGAGCAGAAATGTCAACCATGTCAACTGCAAAGCTCCCTACCCACTTCATGTACAACACACAATCTAAAAATCAACTCGGTAGCACCATCATCAAGTGTCCATCGTCAATTGGATCTACGAGAAACATTTTGAAATCCTTTGGCTTGAATTCACGTCCCTCATTCAGAGCCTGTGCAATGGCAGCTTTCAAAATTAAACTTGTCGAACCATGTGGGAAAGAGCATGAGTTTGAGGCATCTGATGATACTTATATTCTTGATGCAGCTGAAGAAGCGGGAATAGACTTACCTTATTCTTGCAGGGCAGGTGCGTGTTCTACGTGTGCTGGGAAAATAGTTTCGGGTTCGGTTGATCAATCAGACGGGTCATTCCTTGACGATGATCAAATGGCAAATGGTTACTTGTTAACCTGTATTTCACTCCCAACTGCAGATTGTGTGATTCACACACACAAAGAAGGAGAACTGATCTGAGTATGATAGTTTGAATGATACAGAGTGTTTTCTTGTCTAATGGTTTTCATTTGTAATGTCATATTATTAAAAAATGAAAAAAATGAAAAAATAAATCAAATGTGTGAACTTTCTCGTCATGCACTTTCCTTGTTATTATTATCTACTTACATTGCATGAGAAATTTTGTACAATTATTTCTTTGAACCTATGGACATTGACATTCTCATTATATCATTGAAAAATCACTAAGCATATATATACTGTTAACTTGATATTTTGGAAACTAAATCAGTGAATTGGCCAACAATTTCATGTAATAGTA

mRNA sequence

ATGTCAACCATGTCAACTGCAAAGCTCCCTACCCACTTCATGTACAACACACAATCTAAAAATCAACTCGGTAGCACCATCATCAAGTGTCCATCGTCAATTGGATCTACGAGAAACATTTTGAAATCCTTTGGCTTGAATTCACGTCCCTCATTCAGAGCCTGTGCAATGGCAGCTTTCAAAATTAAACTTGTCGAACCATGTGGGAAAGAGCATGAGTTTGAGGCATCTGATGATACTTATATTCTTGATGCAGCTGAAGAAGCGGGAATAGACTTACCTTATTCTTGCAGGGCAGGTGCGTGTTCTACGTGTGCTGGGAAAATAGTTTCGGGTTCGGTTGATCAATCAGACGGGTCATTCCTTGACGATGATCAAATGGCAAATGGTTACTTGTTAACCTGTATTTCACTCCCAACTGCAGATTGTGTGATTCACACACACAAAGAAGGAGAACTGATCTGA

Coding sequence (CDS)

ATGTCAACCATGTCAACTGCAAAGCTCCCTACCCACTTCATGTACAACACACAATCTAAAAATCAACTCGGTAGCACCATCATCAAGTGTCCATCGTCAATTGGATCTACGAGAAACATTTTGAAATCCTTTGGCTTGAATTCACGTCCCTCATTCAGAGCCTGTGCAATGGCAGCTTTCAAAATTAAACTTGTCGAACCATGTGGGAAAGAGCATGAGTTTGAGGCATCTGATGATACTTATATTCTTGATGCAGCTGAAGAAGCGGGAATAGACTTACCTTATTCTTGCAGGGCAGGTGCGTGTTCTACGTGTGCTGGGAAAATAGTTTCGGGTTCGGTTGATCAATCAGACGGGTCATTCCTTGACGATGATCAAATGGCAAATGGTTACTTGTTAACCTGTATTTCACTCCCAACTGCAGATTGTGTGATTCACACACACAAAGAAGGAGAACTGATCTGA

Protein sequence

MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAFKIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGSFLDDDQMANGYLLTCISLPTADCVIHTHKEGELI
Homology
[Close]
BLAST of CsaV3_1G014830 vs. NCBI nr
Match: KGN64931.1 (hypothetical protein Csa_1G163160 [Cucumis sativus])

HSP 1 Score: 315.5 bits (807), Expect = 1.0e-82
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0 

Query: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAF 60
           MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAF
Sbjct: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAF 60

Query: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGS 120
           KIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGS
Sbjct: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGS 120

Query: 121 FLDDDQMANGYLLTCISLPTADCVIHTHKEGELI 155
           FLDDDQMANGYLLTCISLPTADCVIHTHKEGELI
Sbjct: 121 FLDDDQMANGYLLTCISLPTADCVIHTHKEGELI 154

[Close]
BLAST of CsaV3_1G014830 vs. NCBI nr
Match: XP_022142635.1 (ferredoxin, root R-B2 [Momordica charantia])

HSP 1 Score: 261.5 bits (667), Expect = 1.8e-66
Identity = 127/154 (82.47%), Postives = 134/154 (87.01%), Query Frame = 0 

Query: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAF 60
           MSTMSTA LP+ F  N   KN+   TIIKCPSSIGS  NI +SFGL S PSFR  AMA +
Sbjct: 1   MSTMSTATLPSRFTLNAPCKNRYRITIIKCPSSIGSASNISRSFGLKSSPSFRTSAMAVY 60

Query: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGS 120
           KIKLVEPCGKEHEFEASDDTYILDAAEEAG+DLPYSCRAGACSTCAGK+VSGSVDQSDGS
Sbjct: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKVVSGSVDQSDGS 120

Query: 121 FLDDDQMANGYLLTCISLPTADCVIHTHKEGELI 155
           FLDD QMA GYLLTC+SLPTADCVIHTHKEGELI
Sbjct: 121 FLDDTQMAEGYLLTCVSLPTADCVIHTHKEGELI 154

[Close]
BLAST of CsaV3_1G014830 vs. NCBI nr
Match: XP_022944833.1 (uncharacterized protein LOC111449248 isoform X2 [Cucurbita moschata])

HSP 1 Score: 256.5 bits (654), Expect = 5.7e-65
Identity = 129/156 (82.69%), Postives = 135/156 (86.54%), Query Frame = 0 

Query: 1   MSTMSTAKLPTHFMYNTQS--KNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMA 60
           MSTMSTAKLP+  M+NT +  KNQ  STIIKCPSSIGST NI KSFGL S PS R  AMA
Sbjct: 1   MSTMSTAKLPSRTMFNTSAPCKNQFRSTIIKCPSSIGSTSNISKSFGLKSSPSSRTTAMA 60

Query: 61  AFKIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSD 120
            +KIKL+EPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGK VSGSVDQSD
Sbjct: 61  VYKIKLIEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKFVSGSVDQSD 120

Query: 121 GSFLDDDQMANGYLLTCISLPTADCVIHTHKEGELI 155
           GSFLDD QM  GYLLTCIS PT+DCVI THKEGELI
Sbjct: 121 GSFLDDSQMEEGYLLTCISHPTSDCVILTHKEGELI 156

[Close]
BLAST of CsaV3_1G014830 vs. NCBI nr
Match: XP_023541284.1 (ferredoxin-3, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 251.9 bits (642), Expect = 1.4e-63
Identity = 127/156 (81.41%), Postives = 134/156 (85.90%), Query Frame = 0 

Query: 1   MSTMSTAKLPTHFMYNTQS--KNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMA 60
           MSTMSTAKLP+  M+NT +  KNQ  S+IIKCPSSIGST NI KSFGL S  S R  AMA
Sbjct: 41  MSTMSTAKLPSRTMFNTSAPCKNQFRSSIIKCPSSIGSTSNISKSFGLKSSSSSRTTAMA 100

Query: 61  AFKIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSD 120
            +KIKL+EPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGK VSGSVDQSD
Sbjct: 101 VYKIKLIEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKFVSGSVDQSD 160

Query: 121 GSFLDDDQMANGYLLTCISLPTADCVIHTHKEGELI 155
           GSFLDD QM  GYLLTCIS PT+DCVI THKEGELI
Sbjct: 161 GSFLDDSQMEEGYLLTCISHPTSDCVILTHKEGELI 196

[Close]
BLAST of CsaV3_1G014830 vs. NCBI nr
Match: XP_022967109.1 (uncharacterized protein LOC111466612 [Cucurbita maxima] >XP_022967110.1 uncharacterized protein LOC111466612 [Cucurbita maxima])

HSP 1 Score: 248.8 bits (634), Expect = 1.2e-62
Identity = 126/156 (80.77%), Postives = 133/156 (85.26%), Query Frame = 0 

Query: 1   MSTMSTAKLPTHFMYNTQS--KNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMA 60
           MSTMSTAKLP+  M+N  +  KNQ  S+IIKCPSSIGST NI KSFGL S  S R  AMA
Sbjct: 1   MSTMSTAKLPSRTMFNRSAPCKNQFRSSIIKCPSSIGSTSNISKSFGLKSLHSSRTTAMA 60

Query: 61  AFKIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSD 120
            +KIKL+EPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGK VSGSVDQSD
Sbjct: 61  VYKIKLIEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKFVSGSVDQSD 120

Query: 121 GSFLDDDQMANGYLLTCISLPTADCVIHTHKEGELI 155
           GSFLDD QM  GYLLTCIS PT+DCVI THKEGELI
Sbjct: 121 GSFLDDSQMEEGYLLTCISHPTSDCVILTHKEGELI 156

[Close]
BLAST of CsaV3_1G014830 vs. TAIR10
Match: AT2G27510.1 (ferredoxin 3)

HSP 1 Score: 170.2 bits (430), Expect = 9.7e-43
Identity = 86/154 (55.84%), Postives = 111/154 (72.08%), Query Frame = 0 

Query: 4   MSTAKLPTHFMYNTQSKNQLGSTIIKCPS---SIGSTRNILKSFGLN-SRPSFRACAMAA 63
           M+T ++ +  M     ++Q  + +I   S   S+GST+ + +SFGL  S  S  A   A 
Sbjct: 1   MATVRISSTSMTKAVLRSQTTNKLITNKSYNLSVGSTKRVSRSFGLKCSANSGGATMSAV 60

Query: 64  FKIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDG 123
           +K+KL+ P G+E EFE  DD YILDAAEEAG+DLPYSCRAGACSTCAG+IVSG+VDQSDG
Sbjct: 61  YKVKLLGPDGQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGACSTCAGQIVSGNVDQSDG 120

Query: 124 SFLDDDQMANGYLLTCISLPTADCVIHTHKEGEL 154
           SFL+D  +  GY+LTC++ P +DCVIHTHKE EL
Sbjct: 121 SFLEDSHLEKGYVLTCVAYPQSDCVIHTHKETEL 154

[Close]
BLAST of CsaV3_1G014830 vs. TAIR10
Match: AT1G10960.1 (ferredoxin 1)

HSP 1 Score: 145.6 bits (366), Expect = 2.6e-35
Identity = 77/151 (50.99%), Postives = 104/151 (68.87%), Query Frame = 0 

Query: 2   STMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPS--FRACAMAA 61
           + +S+A + T F+   Q+   L S          +T+++   FGL S  +   R  AMA 
Sbjct: 4   TALSSAIVSTSFLRRQQTPISLRSL------PFANTQSL---FGLKSSTARGGRVTAMAT 63

Query: 62  FKIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDG 121
           +K+K + P G E E E  +D Y+LDAAEEAG+DLPYSCRAG+CS+CAGK+VSGS+DQSD 
Sbjct: 64  YKVKFITPEG-EQEVECEEDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQ 123

Query: 122 SFLDDDQMANGYLLTCISLPTADCVIHTHKE 151
           SFLDD+QM+ GY+LTC++ PT+D VI THKE
Sbjct: 124 SFLDDEQMSEGYVLTCVAYPTSDVVIETHKE 144

[Close]
BLAST of CsaV3_1G014830 vs. TAIR10
Match: AT1G60950.1 (2Fe-2S ferredoxin-like superfamily protein)

HSP 1 Score: 143.3 bits (360), Expect = 1.3e-34
Identity = 75/139 (53.96%), Postives = 98/139 (70.50%), Query Frame = 0 

Query: 23  LGSTIIK---CPSSIGS--TRNILKSFGLNSRPS--FRACAMAAFKIKLVEPCGKEHEFE 82
           +G++ I+    P S+ S  + N    FGL S  +   R  AMA +K+K + P G E E E
Sbjct: 11  VGTSFIRRSPAPISLRSLPSANTQSLFGLKSGTARGGRVTAMATYKVKFITPEG-ELEVE 70

Query: 83  ASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGSFLDDDQMANGYLLTC 142
             DD Y+LDAAEEAGIDLPYSCRAG+CS+CAGK+VSGSVDQSD SFLDD+Q+  G++LTC
Sbjct: 71  CDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSFLDDEQIGEGFVLTC 130

Query: 143 ISLPTADCVIHTHKEGELI 155
            + PT+D  I THKE +++
Sbjct: 131 AAYPTSDVTIETHKEEDIV 148

[Close]
BLAST of CsaV3_1G014830 vs. TAIR10
Match: AT5G10000.1 (ferredoxin 4)

HSP 1 Score: 134.4 bits (337), Expect = 5.9e-32
Identity = 62/113 (54.87%), Postives = 87/113 (76.99%), Query Frame = 0 

Query: 44  FGL-NSRPSF-RACAMAAFKIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGA 103
           FGL +SR +F +  A  + K+KL+ P G+E E E ++D  IL++AE AG++LPYSCR+G 
Sbjct: 36  FGLSSSRGNFGKVFAKESRKVKLISPEGEEQEIEGNEDCCILESAENAGLELPYSCRSGT 95

Query: 104 CSTCAGKIVSGSVDQSDGSFLDDDQMANGYLLTCISLPTADCVIHTHKEGELI 155
           C TC GK+VSG VDQS GSFL+++Q+  GY+LTCI+LP  DCV++THK+ +LI
Sbjct: 96  CGTCCGKLVSGKVDQSLGSFLEEEQIQKGYILTCIALPLEDCVVYTHKQSDLI 148

[Close]
BLAST of CsaV3_1G014830 vs. TAIR10
Match: AT4G14890.1 (2Fe-2S ferredoxin-like superfamily protein)

HSP 1 Score: 89.7 bits (221), Expect = 1.7e-18
Identity = 57/150 (38.00%), Postives = 80/150 (53.33%), Query Frame = 0 

Query: 5   STAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAFKIKL 64
           ST  LP  ++ N+ S     +T+    S+  + RN L +  + +R         A+K+ +
Sbjct: 11  STISLPKPYLSNSFSFPLRNATL----STTTNRRNFLTTGRIIAR---------AYKV-V 70

Query: 65  VEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGSFLDD 124
           VE  GK  E E   D  IL  A ++G+D+PY C  G C TC  K+V+G+VDQS G  L D
Sbjct: 71  VEHDGKTTELEVEPDETILSKALDSGLDVPYDCNLGVCMTCPAKLVTGTVDQS-GGMLSD 130

Query: 125 DQMANGYLLTCISLPTADCVIHTHKEGELI 155
           D +  GY L C S PT+DC I    E EL+
Sbjct: 131 DVVERGYTLLCASYPTSDCHIKMIPEEELL 145

[Close]
BLAST of CsaV3_1G014830 vs. Swiss-Prot
Match: sp|P27788|FER3_MAIZE (Ferredoxin-3, chloroplastic OS=Zea mays OX=4577 GN=FDX3 PE=1 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 3.2e-43
Identity = 83/132 (62.88%), Postives = 97/132 (73.48%), Query Frame = 0 

Query: 22  QLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAFKIKLVEPCGKEHEFEASDDTY 81
           Q   T +K PSS+     + K   L +       AMA +K+KLV P G+EHEF+A DD Y
Sbjct: 20  QASQTAVKSPSSLSFFSQVTKVPSLKTSKKLDVSAMAVYKVKLVGPEGEEHEFDAPDDAY 79

Query: 82  ILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGSFLDDDQMANGYLLTCISLPTA 141
           ILDAAE AG++LPYSCRAGACSTCAGKI SGSVDQSDGSFLDD Q   GY+LTC+S P +
Sbjct: 80  ILDAAETAGVELPYSCRAGACSTCAGKIESGSVDQSDGSFLDDGQQEEGYVLTCVSYPKS 139

Query: 142 DCVIHTHKEGEL 154
           DCVIHTHKEG+L
Sbjct: 140 DCVIHTHKEGDL 151

[Close]
BLAST of CsaV3_1G014830 vs. Swiss-Prot
Match: sp|Q9ZQG8|FER3_ARATH (Ferredoxin-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD3 PE=1 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 1.8e-41
Identity = 86/154 (55.84%), Postives = 111/154 (72.08%), Query Frame = 0 

Query: 4   MSTAKLPTHFMYNTQSKNQLGSTIIKCPS---SIGSTRNILKSFGLN-SRPSFRACAMAA 63
           M+T ++ +  M     ++Q  + +I   S   S+GST+ + +SFGL  S  S  A   A 
Sbjct: 1   MATVRISSTSMTKAVLRSQTTNKLITNKSYNLSVGSTKRVSRSFGLKCSANSGGATMSAV 60

Query: 64  FKIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDG 123
           +K+KL+ P G+E EFE  DD YILDAAEEAG+DLPYSCRAGACSTCAG+IVSG+VDQSDG
Sbjct: 61  YKVKLLGPDGQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGACSTCAGQIVSGNVDQSDG 120

Query: 124 SFLDDDQMANGYLLTCISLPTADCVIHTHKEGEL 154
           SFL+D  +  GY+LTC++ P +DCVIHTHKE EL
Sbjct: 121 SFLEDSHLEKGYVLTCVAYPQSDCVIHTHKETEL 154

[Close]
BLAST of CsaV3_1G014830 vs. Swiss-Prot
Match: sp|P94044|FER6_MAIZE (Ferredoxin-6, chloroplastic OS=Zea mays OX=4577 GN=FDX6 PE=2 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 9.0e-38
Identity = 83/154 (53.90%), Postives = 100/154 (64.94%), Query Frame = 0 

Query: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAF 60
           MST +  +LP      +       +      S  G  R   ++ G      F A A A  
Sbjct: 1   MSTATAPRLPAPRSGASYHYQTTAAPAANTLSFAGHARQAARASGPRLSSRFVASAAAVL 60

Query: 61  -KIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDG 120
            K+KLV P G EHEFEA DDTYIL+AAE AG++LP+SCRAG+CSTCAG++ +G VDQS+G
Sbjct: 61  HKVKLVGPDGTEHEFEAPDDTYILEAAETAGVELPFSCRAGSCSTCAGRMSAGEVDQSEG 120

Query: 121 SFLDDDQMANGYLLTCISLPTADCVIHTHKEGEL 154
           SFLDD QMA GYLLTCIS P ADCVIHTHKE +L
Sbjct: 121 SFLDDGQMAEGYLLTCISYPKADCVIHTHKEEDL 154

[Close]
BLAST of CsaV3_1G014830 vs. Swiss-Prot
Match: sp|P14937|FER2_RAPSA (Ferredoxin, root R-B2 OS=Raphanus sativus OX=3726 PE=1 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 6.4e-36
Identity = 66/96 (68.75%), Postives = 81/96 (84.38%), Query Frame = 0 

Query: 58  AAFKIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQS 117
           A +K+KL+ P G+E+EFE  DD +ILDAAEEAG+DLPYSCRAGACSTCAG+IV G VDQS
Sbjct: 2   AVYKVKLIGPEGEENEFEVQDDQFILDAAEEAGVDLPYSCRAGACSTCAGQIVKGQVDQS 61

Query: 118 DGSFLDDDQMANGYLLTCISLPTADCVIHTHKEGEL 154
           +GSFL+DD    G++LTC++ P +DCVIHTHKE EL
Sbjct: 62  EGSFLEDDHFEKGFVLTCVAYPQSDCVIHTHKETEL 97

[Close]
BLAST of CsaV3_1G014830 vs. Swiss-Prot
Match: sp|P00243|FER_SYNY4 (Ferredoxin OS=Synechocystis sp. (strain PCC 6714) OX=1147 PE=1 SV=2)

HSP 1 Score: 149.8 bits (377), Expect = 2.4e-35
Identity = 69/97 (71.13%), Postives = 82/97 (84.54%), Query Frame = 0 

Query: 57  MAAFKIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQ 116
           MA++ +KL+ P G E+  E SDDTYILDAAEEAG+DLPYSCRAGACSTCAGKI +GSVDQ
Sbjct: 1   MASYTVKLITPDG-ENSIECSDDTYILDAAEEAGLDLPYSCRAGACSTCAGKITAGSVDQ 60

Query: 117 SDGSFLDDDQMANGYLLTCISLPTADCVIHTHKEGEL 154
           SD SFLDDDQ+  GY+LTC++ PT+DC I THKE +L
Sbjct: 61  SDQSFLDDDQIEAGYVLTCVAYPTSDCTIETHKEEDL 96

[Close]
BLAST of CsaV3_1G014830 vs. TrEMBL
Match: tr|A0A0A0LY90|A0A0A0LY90_CUCSA (Ferredoxin OS=Cucumis sativus OX=3659 GN=Csa_1G163160 PE=3 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 6.8e-83
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0 

Query: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAF 60
           MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAF
Sbjct: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAF 60

Query: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGS 120
           KIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGS
Sbjct: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGS 120

Query: 121 FLDDDQMANGYLLTCISLPTADCVIHTHKEGELI 155
           FLDDDQMANGYLLTCISLPTADCVIHTHKEGELI
Sbjct: 121 FLDDDQMANGYLLTCISLPTADCVIHTHKEGELI 154

[Close]
BLAST of CsaV3_1G014830 vs. TrEMBL
Match: tr|A0A2P4M2V0|A0A2P4M2V0_QUESU (Ferredoxin OS=Quercus suber OX=58331 GN=CFP56_70278 PE=3 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 4.2e-56
Identity = 104/153 (67.97%), Postives = 129/153 (84.31%), Query Frame = 0 

Query: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAF 60
           MSTM++ KLP+H M+    +N+  S IIKCPSS+GS ++I K+FGL + PSFR  AMA +
Sbjct: 290 MSTMTSVKLPSHCMFRNAPQNRFNSAIIKCPSSLGSVKSISKAFGLKASPSFRVSAMAVY 349

Query: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGS 120
           KIKLV P G+E+EFEA DD YILD+AE AG++LPYSCRAGACSTCAGK+V+GSVDQSDGS
Sbjct: 350 KIKLVGPDGEENEFEAPDDAYILDSAENAGVELPYSCRAGACSTCAGKMVTGSVDQSDGS 409

Query: 121 FLDDDQMANGYLLTCISLPTADCVIHTHKEGEL 154
           FLD++QM  G++LTC+S PTADCVIHTHKEG+L
Sbjct: 410 FLDENQMKEGFVLTCVSYPTADCVIHTHKEGDL 442

[Close]
BLAST of CsaV3_1G014830 vs. TrEMBL
Match: tr|V7AFQ6|V7AFQ6_PHAVU (Ferredoxin OS=Phaseolus vulgaris OX=3885 GN=PHAVU_011G094400g PE=3 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 5.4e-56
Identity = 106/154 (68.83%), Postives = 132/154 (85.71%), Query Frame = 0 

Query: 1   MSTMSTAKLPTHFMYNTQSKNQLG-STIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAA 60
           M+T+ST K+ +H M+ T +KNQ   +T +KCPSS+GS +++ +SFGL S  SFR  AMA+
Sbjct: 1   MATLSTVKVSSHCMFQTPNKNQFTLATTVKCPSSLGSVKSVSRSFGLKSSSSFRVTAMAS 60

Query: 61  FKIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDG 120
           +K+KL+ P GKE+EFEASDDTYILDAAE+AG++LPYSCRAGACSTCAGKIV+GSVDQSDG
Sbjct: 61  YKVKLIGPDGKENEFEASDDTYILDAAEDAGVELPYSCRAGACSTCAGKIVAGSVDQSDG 120

Query: 121 SFLDDDQMANGYLLTCISLPTADCVIHTHKEGEL 154
           SFLDD+Q+  G++LTCIS PTADCVI THKEGEL
Sbjct: 121 SFLDDNQLKEGFVLTCISYPTADCVIETHKEGEL 154

[Close]
BLAST of CsaV3_1G014830 vs. TrEMBL
Match: tr|A0A2N9INM6|A0A2N9INM6_FAGSY (Ferredoxin OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS55038 PE=3 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 7.1e-56
Identity = 107/153 (69.93%), Postives = 128/153 (83.66%), Query Frame = 0 

Query: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAF 60
           MSTM+  KLP+H M  T  +N+  S IIK PSS+GS ++I K+FGL + PSFRA AMA +
Sbjct: 1   MSTMAAVKLPSHCMVRTAPQNRFNSAIIKRPSSLGSVKSISKAFGLKASPSFRASAMAVY 60

Query: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGS 120
           KIKLV P G+E EFEA DDTYILD+AE AG++LPYSCRAGACS+CAGK+VSGSVDQSDGS
Sbjct: 61  KIKLVGPNGEESEFEAPDDTYILDSAENAGVELPYSCRAGACSSCAGKMVSGSVDQSDGS 120

Query: 121 FLDDDQMANGYLLTCISLPTADCVIHTHKEGEL 154
           FLDD+QM  G++LTC+S PTADCVIHTHKEG+L
Sbjct: 121 FLDDNQMKEGFVLTCVSYPTADCVIHTHKEGDL 153

[Close]
BLAST of CsaV3_1G014830 vs. TrEMBL
Match: tr|A0A151TNV0|A0A151TNV0_CAJCA (Ferredoxin OS=Cajanus cajan OX=3821 GN=KK1_022369 PE=3 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 2.1e-55
Identity = 107/154 (69.48%), Postives = 129/154 (83.77%), Query Frame = 0 

Query: 1   MSTMSTAKLPTHFMYNTQSKNQLG-STIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAA 60
           M+T+ST  L  H M+ T SKNQ   ST +KCPSS+GS R++ +SFGL S  SFR  AMA+
Sbjct: 1   MATLSTVNLSPHCMFQTPSKNQSTISTTVKCPSSLGSVRSVSRSFGLKSSSSFRVTAMAS 60

Query: 61  FKIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDG 120
           +K+KL+ P GKE+EFEA+DDTYILDAAE AGI+LPYSCRAGACSTCAGKIV+G+VDQSDG
Sbjct: 61  YKVKLIGPDGKENEFEAADDTYILDAAENAGIELPYSCRAGACSTCAGKIVAGAVDQSDG 120

Query: 121 SFLDDDQMANGYLLTCISLPTADCVIHTHKEGEL 154
           SFLDD+Q+  G+LLTC+S PTADCVI THKEG+L
Sbjct: 121 SFLDDNQLKEGFLLTCVSYPTADCVIETHKEGDL 154

The following BLAST results are available for this feature:
BLAST of CsaV3_1G014830 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN64931.11.0e-82100.00hypothetical protein Csa_1G163160 [Cucumis sativus][more]
XP_022142635.11.8e-6682.47ferredoxin, root R-B2 [Momordica charantia][more]
XP_022944833.15.7e-6582.69uncharacterized protein LOC111449248 isoform X2 [Cucurbita moschata][more]
XP_023541284.11.4e-6381.41ferredoxin-3, chloroplastic [Cucurbita pepo subsp. pepo][more]
XP_022967109.11.2e-6280.77uncharacterized protein LOC111466612 [Cucurbita maxima] >XP_022967110.1 uncharac... [more]
BLAST of CsaV3_1G014830 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G27510.19.7e-4355.84ferredoxin 3[more]
AT1G10960.12.6e-3550.99ferredoxin 1[more]
AT1G60950.11.3e-3453.962Fe-2S ferredoxin-like superfamily protein[more]
AT5G10000.15.9e-3254.87ferredoxin 4[more]
AT4G14890.11.7e-1838.002Fe-2S ferredoxin-like superfamily protein[more]
BLAST of CsaV3_1G014830 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P27788|FER3_MAIZE3.2e-4362.88Ferredoxin-3, chloroplastic OS=Zea mays OX=4577 GN=FDX3 PE=1 SV=1[more]
sp|Q9ZQG8|FER3_ARATH1.8e-4155.84Ferredoxin-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD3 PE=1 SV=1[more]
sp|P94044|FER6_MAIZE9.0e-3853.90Ferredoxin-6, chloroplastic OS=Zea mays OX=4577 GN=FDX6 PE=2 SV=1[more]
sp|P14937|FER2_RAPSA6.4e-3668.75Ferredoxin, root R-B2 OS=Raphanus sativus OX=3726 PE=1 SV=1[more]
sp|P00243|FER_SYNY42.4e-3571.13Ferredoxin OS=Synechocystis sp. (strain PCC 6714) OX=1147 PE=1 SV=2[more]
BLAST of CsaV3_1G014830 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LY90|A0A0A0LY90_CUCSA6.8e-83100.00Ferredoxin OS=Cucumis sativus OX=3659 GN=Csa_1G163160 PE=3 SV=1[more]
tr|A0A2P4M2V0|A0A2P4M2V0_QUESU4.2e-5667.97Ferredoxin OS=Quercus suber OX=58331 GN=CFP56_70278 PE=3 SV=1[more]
tr|V7AFQ6|V7AFQ6_PHAVU5.4e-5668.83Ferredoxin OS=Phaseolus vulgaris OX=3885 GN=PHAVU_011G094400g PE=3 SV=1[more]
tr|A0A2N9INM6|A0A2N9INM6_FAGSY7.1e-5669.93Ferredoxin OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS55038 PE=3 SV=1[more]
tr|A0A151TNV0|A0A151TNV0_CAJCA2.1e-5569.48Ferredoxin OS=Cajanus cajan OX=3821 GN=KK1_022369 PE=3 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0051536iron-sulfur cluster binding
GO:00515372 iron, 2 sulfur cluster binding
GO:0009055electron carrier activity
Vocabulary: Biological Process
TermDefinition
GO:0022900electron transport chain
Vocabulary: INTERPRO
TermDefinition
IPR0360102Fe-2S_ferredoxin-like_sf
IPR0060582Fe2S_fd_BS
IPR012675Beta-grasp_dom_sf
IPR0010412Fe-2S_ferredoxin-type
IPR010241Fd_pln
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0022900 electron transport chain
cellular_component GO:0005575 cellular_component
cellular_component GO:0009507 chloroplast
molecular_function GO:0051537 2 iron, 2 sulfur cluster binding
molecular_function GO:0009055 electron carrier activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0051536 iron-sulfur cluster binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G014830.1CsaV3_1G014830.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010241Ferredoxin [2Fe-2S], plantTIGRFAMTIGR02008TIGR02008coord: 59..153
e-value: 3.3E-46
score: 153.0
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPFAMPF00111Fer2coord: 66..140
e-value: 5.6E-22
score: 77.4
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPROSITEPS510852FE2S_FER_2coord: 60..151
score: 12.68
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainCDDcd00207fer2coord: 65..146
e-value: 3.8117E-32
score: 110.562
IPR012675Beta-grasp domain superfamilyGENE3DG3DSA:3.10.20.30coord: 57..154
e-value: 8.4E-32
score: 111.0
NoneNo IPR availablePANTHERPTHR43112:SF12SUBFAMILY NOT NAMEDcoord: 3..153
NoneNo IPR availablePANTHERPTHR43112FAMILY NOT NAMEDcoord: 3..153
IPR0060582Fe-2S ferredoxin, iron-sulphur binding sitePROSITEPS001972FE2S_FER_1coord: 97..105
IPR0360102Fe-2S ferredoxin-like superfamilySUPERFAMILYSSF542922Fe-2S ferredoxin-likecoord: 49..151

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_1G014830CSPI01G14710Wild cucumber (PI 183967)cpicucB001
CsaV3_1G014830Cucsa.199720Cucumber (Gy14) v1cgycucB322
CsaV3_1G014830CmoCh18G006650Cucurbita moschata (Rifu)cmocucB0460
CsaV3_1G014830Cp4.1LG09g05620Cucurbita pepo (Zucchini)cpecucB0024
CsaV3_1G014830CsGy1G014590Cucumber (Gy14) v2cgybcucB002
CsaV3_1G014830Carg26273Silver-seed gourdcarcucB0000
CsaV3_1G014830MELO3C004712Melon (DHL92) v3.5.1cucmeB010
CsaV3_1G014830ClCG01G012230Watermelon (Charleston Gray)cucwcgB026
CsaV3_1G014830MELO3C004712.2Melon (DHL92) v3.6.1cucmedB009
CsaV3_1G014830Cla97C01G011570Watermelon (97103) v2cucwmbB008
CsaV3_1G014830Bhi08G000048Wax gourdcucwgoB051
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_1G014830Watermelon (97103) v2cucwmbB025
CsaV3_1G014830Cucumber (Chinese Long) v3cuccucB046
CsaV3_1G014830Cucurbita maxima (Rimu)cmacucB0234
CsaV3_1G014830Cucurbita maxima (Rimu)cmacucB0473
CsaV3_1G014830Cucurbita maxima (Rimu)cmacucB0476
CsaV3_1G014830Cucurbita maxima (Rimu)cmacucB0694
CsaV3_1G014830Cucurbita maxima (Rimu)cmacucB0962
CsaV3_1G014830Cucurbita moschata (Rifu)cmocucB0951
CsaV3_1G014830Cucurbita pepo (Zucchini)cpecucB1044
CsaV3_1G014830Bottle gourd (USVL1VR-Ls)cuclsiB005
CsaV3_1G014830Bottle gourd (USVL1VR-Ls)cuclsiB021
CsaV3_1G014830Bottle gourd (USVL1VR-Ls)cuclsiB048
CsaV3_1G014830Melon (DHL92) v3.5.1cucmeB072
CsaV3_1G014830Watermelon (Charleston Gray)cucwcgB030
CsaV3_1G014830Watermelon (97103) v1cucwmB009
CsaV3_1G014830Watermelon (97103) v1cucwmB049
CsaV3_1G014830Watermelon (97103) v1cucwmB063
CsaV3_1G014830Watermelon (97103) v1cucwmB074