CsaV3_1G014830 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_1G014830
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Ferredoxin
Location	chr1 : 10470639 .. 10474142 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTTCTTAAAATGACTAAAAGTGTCTAGATTTTAGTTTTTAAACTTGAAGACATTTTGAGACAATCTTAGCCCGAGATGCTAATACGTATTGCTTATGTTCTTTAGTTCAATGCTATCTTATGGCATCCGGAGGCAATGTTGTTTAGATGGTTTCCATGATTGAATTAGTTTTTTTTTTAAAAAAAGTCACAAATGGGTAGCCGCCTGACCTACCTTTTTATAGAGCATAAAAAGGAAGAAGCATAAGATGTAAGGAACTTGGATCTGCTACTTCACTCTCCGCCTCTTCGAACCTCGCAAATGGCAAATTCTCCATTCATCCCCCCTCTTCCCTCTTCCTCCTCTGGGCCTTCACCATTCTCCAAAAGCCATTTTTCTTCCTCTTTCTTTATATATATTCTATATATATATATATATATTGCCCTAATATTCGCATCCTTCAACCACTTACGTCTCCCTTTTGATTTCCTGTCCTTGCTTTCTCCGCTGCCTCTCTCTTTCTGTAAGCTTCTCTTCCCCCATTTCCTTCCTTCGTTTATATGTTCTTTCTATCTTTTGCTATGAAAATCAACTAATTTGCTTCTCAACATATTTGTTCTCTAACCATCTCCCTCATCAAAATGCCCTTTTCCTTTTACCATTTCGCTATTTACTGTATTTCCTCATTTCCCATATTCTCTTCTCTTTTTACATCACTGCCTTTATTTTTGTTGCTTTCGATCGTTTTAGTTAGATAATATCAATCTGTGCTAACTTCTGTTTCTTCAAATAAAACCTTTGGATTCTGTTGACATTTTGTTCTTAACTAATGCAACTGATCTGGGTTGGAATTGAATGGTTTTGTTCATTACTTATGGAGCTTCGAGTGAAGAGCAGATAAAGCCCTTAGGTTGCATCTTCTCATAATGCTCCATACACCAATTTGCCTCCATTAACATTGAATAGCTTTCTGCTGTGCTACCTCATTTGTTCTTTCAAGAGGCATACAAAATCACTGAACCTATCATTTATTGCATTCGTTTCTCTATGCTCTGAATTGAAACACTCGATGCTTAGTTTTCACACACACGCAAATACTCCATTGCTGTTAAATGATACAACAGTTAATTTACTCTTAAGCTTAAGCATTTGAGTCAATAGGTGTTTTATAACGTTGCTGGAGCAGAGAGCAGATCCTATTTCAAACTCGTCCATTGTTATTTCCTTCTCAATTTACATCGATGTCGATTTCTATTTGTTGGTTCTTCTAAAATTAGAAGATATAATATTAAGTTTACCTTCCCTCCATTAGTTTAAGCTTTTGGGTCAATTGGTGTTTTAAGAATTAGAAAGGTAAATGAAGAAATCAAGTATTTTCTGCTGAATTGTGAGATAAAATGAAAAAGAAAATGGTTCTGCATTTTTCATACCTCTGCCATATGGAGGTTCATTGTTAGAGTATGATCATCATCCATTCTGGTGCTTGTTGGATGTGCTCTATATTCTAAATATTCTGTTTGATCTTTTGTTACTTGCTTGTTCCCCGGTGTAGCCTTTATTTTTCTCACATGCTTTTAGGTTTTGATTGATTTGATTTGTAAACCACACCCGTTTAAATGTGTTTCATGAATTTAGGAGCAGAAATGTCAACCATGTCAACTGCAAAGCTCCCTACCCACTTCATGTACAACACACAATCTAAAAATCAACTCGGTAGCACCATCATCAAGTGTCCATCGTCAATTGGATCTACGAGAAACATTTTGAAATCCTTTGGCTTGAATTCACGTCCCTCATTCAGAGCCTGTGCAATGGCAGCTTTCAAAATTAAACTTGTCGAACCATGTGGGAAAGAGCATGAGTTTGAGGCATCTGATGATACTTATATTCTTGATGCAGCTGAAGAAGCGGGAATAGACTTACCTTATTCTTGCAGGGCAGGTGCGTGTTCTACGTGTGCTGGGAAAATAGTTTCGGGTTCGGTTGATCAATCAGACGGGTCATTCCTTGACGATGATCAAATGGCAAATGGTTACTTGTTAACCTGTATTTCACTCCCAACTGCAGATTGTGTGATTCACACACACAAAGAAGGAGAACTGATCTGAGTATGATAGTTTGAATGATACAGAGTGTTTTCTTGTCTAATGGTTTTCATTTGTAATGTCATATTATTAAAAAATGAAAAAAATGAAAAAATAAATCAAATGTGTGAACTTTCTCGTCATGCACTTTCCTTGTTATTATTATCTACTTACATTGCATGAGAAATTTTGTACAATTATTTCTTTGAACCTATGGACATTGACATTCTCATTATATCATTGAAAAATCACTAAGCATATATATACTGTTAACTTGATATTTTGGAAACTAAATCAGTGAATTGGCCAACAATTTCATGTAATAGTA

mRNA sequence

ATGTCAACCATGTCAACTGCAAAGCTCCCTACCCACTTCATGTACAACACACAATCTAAAAATCAACTCGGTAGCACCATCATCAAGTGTCCATCGTCAATTGGATCTACGAGAAACATTTTGAAATCCTTTGGCTTGAATTCACGTCCCTCATTCAGAGCCTGTGCAATGGCAGCTTTCAAAATTAAACTTGTCGAACCATGTGGGAAAGAGCATGAGTTTGAGGCATCTGATGATACTTATATTCTTGATGCAGCTGAAGAAGCGGGAATAGACTTACCTTATTCTTGCAGGGCAGGTGCGTGTTCTACGTGTGCTGGGAAAATAGTTTCGGGTTCGGTTGATCAATCAGACGGGTCATTCCTTGACGATGATCAAATGGCAAATGGTTACTTGTTAACCTGTATTTCACTCCCAACTGCAGATTGTGTGATTCACACACACAAAGAAGGAGAACTGATCTGA

Coding sequence (CDS)

ATGTCAACCATGTCAACTGCAAAGCTCCCTACCCACTTCATGTACAACACACAATCTAAAAATCAACTCGGTAGCACCATCATCAAGTGTCCATCGTCAATTGGATCTACGAGAAACATTTTGAAATCCTTTGGCTTGAATTCACGTCCCTCATTCAGAGCCTGTGCAATGGCAGCTTTCAAAATTAAACTTGTCGAACCATGTGGGAAAGAGCATGAGTTTGAGGCATCTGATGATACTTATATTCTTGATGCAGCTGAAGAAGCGGGAATAGACTTACCTTATTCTTGCAGGGCAGGTGCGTGTTCTACGTGTGCTGGGAAAATAGTTTCGGGTTCGGTTGATCAATCAGACGGGTCATTCCTTGACGATGATCAAATGGCAAATGGTTACTTGTTAACCTGTATTTCACTCCCAACTGCAGATTGTGTGATTCACACACACAAAGAAGGAGAACTGATCTGA

Protein sequence

MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAFKIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGSFLDDDQMANGYLLTCISLPTADCVIHTHKEGELI

Homology

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BLAST of CsaV3_1G014830 vs. NCBI nr
Match: KGN64931.1 (hypothetical protein Csa_1G163160 [Cucumis sativus])

HSP 1 Score: 315.5 bits (807), Expect = 1.0e-82
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAF 60
           MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAF
Sbjct: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAF 60

Query: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGS 120
           KIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGS
Sbjct: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGS 120

Query: 121 FLDDDQMANGYLLTCISLPTADCVIHTHKEGELI 155
           FLDDDQMANGYLLTCISLPTADCVIHTHKEGELI
Sbjct: 121 FLDDDQMANGYLLTCISLPTADCVIHTHKEGELI 154

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BLAST of CsaV3_1G014830 vs. NCBI nr
Match: XP_022142635.1 (ferredoxin, root R-B2 [Momordica charantia])

HSP 1 Score: 261.5 bits (667), Expect = 1.8e-66
Identity = 127/154 (82.47%), Postives = 134/154 (87.01%), Query Frame = 0


Query: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAF 60
           MSTMSTA LP+ F  N   KN+   TIIKCPSSIGS  NI +SFGL S PSFR  AMA +
Sbjct: 1   MSTMSTATLPSRFTLNAPCKNRYRITIIKCPSSIGSASNISRSFGLKSSPSFRTSAMAVY 60

Query: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGS 120
           KIKLVEPCGKEHEFEASDDTYILDAAEEAG+DLPYSCRAGACSTCAGK+VSGSVDQSDGS
Sbjct: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKVVSGSVDQSDGS 120

Query: 121 FLDDDQMANGYLLTCISLPTADCVIHTHKEGELI 155
           FLDD QMA GYLLTC+SLPTADCVIHTHKEGELI
Sbjct: 121 FLDDTQMAEGYLLTCVSLPTADCVIHTHKEGELI 154

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BLAST of CsaV3_1G014830 vs. NCBI nr
Match: XP_022944833.1 (uncharacterized protein LOC111449248 isoform X2 [Cucurbita moschata])

HSP 1 Score: 256.5 bits (654), Expect = 5.7e-65
Identity = 129/156 (82.69%), Postives = 135/156 (86.54%), Query Frame = 0


Query: 1   MSTMSTAKLPTHFMYNTQS--KNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMA 60
           MSTMSTAKLP+  M+NT +  KNQ  STIIKCPSSIGST NI KSFGL S PS R  AMA
Sbjct: 1   MSTMSTAKLPSRTMFNTSAPCKNQFRSTIIKCPSSIGSTSNISKSFGLKSSPSSRTTAMA 60

Query: 61  AFKIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSD 120
            +KIKL+EPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGK VSGSVDQSD
Sbjct: 61  VYKIKLIEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKFVSGSVDQSD 120

Query: 121 GSFLDDDQMANGYLLTCISLPTADCVIHTHKEGELI 155
           GSFLDD QM  GYLLTCIS PT+DCVI THKEGELI
Sbjct: 121 GSFLDDSQMEEGYLLTCISHPTSDCVILTHKEGELI 156

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BLAST of CsaV3_1G014830 vs. NCBI nr
Match: XP_023541284.1 (ferredoxin-3, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 251.9 bits (642), Expect = 1.4e-63
Identity = 127/156 (81.41%), Postives = 134/156 (85.90%), Query Frame = 0


Query: 1   MSTMSTAKLPTHFMYNTQS--KNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMA 60
           MSTMSTAKLP+  M+NT +  KNQ  S+IIKCPSSIGST NI KSFGL S  S R  AMA
Sbjct: 41  MSTMSTAKLPSRTMFNTSAPCKNQFRSSIIKCPSSIGSTSNISKSFGLKSSSSSRTTAMA 100

Query: 61  AFKIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSD 120
            +KIKL+EPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGK VSGSVDQSD
Sbjct: 101 VYKIKLIEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKFVSGSVDQSD 160

Query: 121 GSFLDDDQMANGYLLTCISLPTADCVIHTHKEGELI 155
           GSFLDD QM  GYLLTCIS PT+DCVI THKEGELI
Sbjct: 161 GSFLDDSQMEEGYLLTCISHPTSDCVILTHKEGELI 196

[Close]

BLAST of CsaV3_1G014830 vs. NCBI nr
Match: XP_022967109.1 (uncharacterized protein LOC111466612 [Cucurbita maxima] >XP_022967110.1 uncharacterized protein LOC111466612 [Cucurbita maxima])

HSP 1 Score: 248.8 bits (634), Expect = 1.2e-62
Identity = 126/156 (80.77%), Postives = 133/156 (85.26%), Query Frame = 0


Query: 1   MSTMSTAKLPTHFMYNTQS--KNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMA 60
           MSTMSTAKLP+  M+N  +  KNQ  S+IIKCPSSIGST NI KSFGL S  S R  AMA
Sbjct: 1   MSTMSTAKLPSRTMFNRSAPCKNQFRSSIIKCPSSIGSTSNISKSFGLKSLHSSRTTAMA 60

Query: 61  AFKIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSD 120
            +KIKL+EPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGK VSGSVDQSD
Sbjct: 61  VYKIKLIEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKFVSGSVDQSD 120

Query: 121 GSFLDDDQMANGYLLTCISLPTADCVIHTHKEGELI 155
           GSFLDD QM  GYLLTCIS PT+DCVI THKEGELI
Sbjct: 121 GSFLDDSQMEEGYLLTCISHPTSDCVILTHKEGELI 156

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BLAST of CsaV3_1G014830 vs. TAIR10
Match: AT2G27510.1 (ferredoxin 3)

HSP 1 Score: 170.2 bits (430), Expect = 9.7e-43
Identity = 86/154 (55.84%), Postives = 111/154 (72.08%), Query Frame = 0


Query: 4   MSTAKLPTHFMYNTQSKNQLGSTIIKCPS---SIGSTRNILKSFGLN-SRPSFRACAMAA 63
           M+T ++ +  M     ++Q  + +I   S   S+GST+ + +SFGL  S  S  A   A 
Sbjct: 1   MATVRISSTSMTKAVLRSQTTNKLITNKSYNLSVGSTKRVSRSFGLKCSANSGGATMSAV 60

Query: 64  FKIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDG 123
           +K+KL+ P G+E EFE  DD YILDAAEEAG+DLPYSCRAGACSTCAG+IVSG+VDQSDG
Sbjct: 61  YKVKLLGPDGQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGACSTCAGQIVSGNVDQSDG 120

Query: 124 SFLDDDQMANGYLLTCISLPTADCVIHTHKEGEL 154
           SFL+D  +  GY+LTC++ P +DCVIHTHKE EL
Sbjct: 121 SFLEDSHLEKGYVLTCVAYPQSDCVIHTHKETEL 154

[Close]

BLAST of CsaV3_1G014830 vs. TAIR10
Match: AT1G10960.1 (ferredoxin 1)

HSP 1 Score: 145.6 bits (366), Expect = 2.6e-35
Identity = 77/151 (50.99%), Postives = 104/151 (68.87%), Query Frame = 0


Query: 2   STMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPS--FRACAMAA 61
           + +S+A + T F+   Q+   L S          +T+++   FGL S  +   R  AMA 
Sbjct: 4   TALSSAIVSTSFLRRQQTPISLRSL------PFANTQSL---FGLKSSTARGGRVTAMAT 63

Query: 62  FKIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDG 121
           +K+K + P G E E E  +D Y+LDAAEEAG+DLPYSCRAG+CS+CAGK+VSGS+DQSD 
Sbjct: 64  YKVKFITPEG-EQEVECEEDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQ 123

Query: 122 SFLDDDQMANGYLLTCISLPTADCVIHTHKE 151
           SFLDD+QM+ GY+LTC++ PT+D VI THKE
Sbjct: 124 SFLDDEQMSEGYVLTCVAYPTSDVVIETHKE 144

[Close]

BLAST of CsaV3_1G014830 vs. TAIR10
Match: AT1G60950.1 (2Fe-2S ferredoxin-like superfamily protein)

HSP 1 Score: 143.3 bits (360), Expect = 1.3e-34
Identity = 75/139 (53.96%), Postives = 98/139 (70.50%), Query Frame = 0


Query: 23  LGSTIIK---CPSSIGS--TRNILKSFGLNSRPS--FRACAMAAFKIKLVEPCGKEHEFE 82
           +G++ I+    P S+ S  + N    FGL S  +   R  AMA +K+K + P G E E E
Sbjct: 11  VGTSFIRRSPAPISLRSLPSANTQSLFGLKSGTARGGRVTAMATYKVKFITPEG-ELEVE 70

Query: 83  ASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGSFLDDDQMANGYLLTC 142
             DD Y+LDAAEEAGIDLPYSCRAG+CS+CAGK+VSGSVDQSD SFLDD+Q+  G++LTC
Sbjct: 71  CDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSFLDDEQIGEGFVLTC 130

Query: 143 ISLPTADCVIHTHKEGELI 155
            + PT+D  I THKE +++
Sbjct: 131 AAYPTSDVTIETHKEEDIV 148

[Close]

BLAST of CsaV3_1G014830 vs. TAIR10
Match: AT5G10000.1 (ferredoxin 4)

HSP 1 Score: 134.4 bits (337), Expect = 5.9e-32
Identity = 62/113 (54.87%), Postives = 87/113 (76.99%), Query Frame = 0


Query: 44  FGL-NSRPSF-RACAMAAFKIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGA 103
           FGL +SR +F +  A  + K+KL+ P G+E E E ++D  IL++AE AG++LPYSCR+G 
Sbjct: 36  FGLSSSRGNFGKVFAKESRKVKLISPEGEEQEIEGNEDCCILESAENAGLELPYSCRSGT 95

Query: 104 CSTCAGKIVSGSVDQSDGSFLDDDQMANGYLLTCISLPTADCVIHTHKEGELI 155
           C TC GK+VSG VDQS GSFL+++Q+  GY+LTCI+LP  DCV++THK+ +LI
Sbjct: 96  CGTCCGKLVSGKVDQSLGSFLEEEQIQKGYILTCIALPLEDCVVYTHKQSDLI 148

[Close]

BLAST of CsaV3_1G014830 vs. TAIR10
Match: AT4G14890.1 (2Fe-2S ferredoxin-like superfamily protein)

HSP 1 Score: 89.7 bits (221), Expect = 1.7e-18
Identity = 57/150 (38.00%), Postives = 80/150 (53.33%), Query Frame = 0


Query: 5   STAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAFKIKL 64
           ST  LP  ++ N+ S     +T+    S+  + RN L +  + +R         A+K+ +
Sbjct: 11  STISLPKPYLSNSFSFPLRNATL----STTTNRRNFLTTGRIIAR---------AYKV-V 70

Query: 65  VEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGSFLDD 124
           VE  GK  E E   D  IL  A ++G+D+PY C  G C TC  K+V+G+VDQS G  L D
Sbjct: 71  VEHDGKTTELEVEPDETILSKALDSGLDVPYDCNLGVCMTCPAKLVTGTVDQS-GGMLSD 130

Query: 125 DQMANGYLLTCISLPTADCVIHTHKEGELI 155
           D +  GY L C S PT+DC I    E EL+
Sbjct: 131 DVVERGYTLLCASYPTSDCHIKMIPEEELL 145

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BLAST of CsaV3_1G014830 vs. Swiss-Prot
Match: sp|P27788|FER3_MAIZE (Ferredoxin-3, chloroplastic OS=Zea mays OX=4577 GN=FDX3 PE=1 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 3.2e-43
Identity = 83/132 (62.88%), Postives = 97/132 (73.48%), Query Frame = 0


Query: 22  QLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAFKIKLVEPCGKEHEFEASDDTY 81
           Q   T +K PSS+     + K   L +       AMA +K+KLV P G+EHEF+A DD Y
Sbjct: 20  QASQTAVKSPSSLSFFSQVTKVPSLKTSKKLDVSAMAVYKVKLVGPEGEEHEFDAPDDAY 79

Query: 82  ILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGSFLDDDQMANGYLLTCISLPTA 141
           ILDAAE AG++LPYSCRAGACSTCAGKI SGSVDQSDGSFLDD Q   GY+LTC+S P +
Sbjct: 80  ILDAAETAGVELPYSCRAGACSTCAGKIESGSVDQSDGSFLDDGQQEEGYVLTCVSYPKS 139

Query: 142 DCVIHTHKEGEL 154
           DCVIHTHKEG+L
Sbjct: 140 DCVIHTHKEGDL 151

[Close]

BLAST of CsaV3_1G014830 vs. Swiss-Prot
Match: sp|Q9ZQG8|FER3_ARATH (Ferredoxin-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD3 PE=1 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 1.8e-41
Identity = 86/154 (55.84%), Postives = 111/154 (72.08%), Query Frame = 0


Query: 4   MSTAKLPTHFMYNTQSKNQLGSTIIKCPS---SIGSTRNILKSFGLN-SRPSFRACAMAA 63
           M+T ++ +  M     ++Q  + +I   S   S+GST+ + +SFGL  S  S  A   A 
Sbjct: 1   MATVRISSTSMTKAVLRSQTTNKLITNKSYNLSVGSTKRVSRSFGLKCSANSGGATMSAV 60

Query: 64  FKIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDG 123
           +K+KL+ P G+E EFE  DD YILDAAEEAG+DLPYSCRAGACSTCAG+IVSG+VDQSDG
Sbjct: 61  YKVKLLGPDGQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGACSTCAGQIVSGNVDQSDG 120

Query: 124 SFLDDDQMANGYLLTCISLPTADCVIHTHKEGEL 154
           SFL+D  +  GY+LTC++ P +DCVIHTHKE EL
Sbjct: 121 SFLEDSHLEKGYVLTCVAYPQSDCVIHTHKETEL 154

[Close]

BLAST of CsaV3_1G014830 vs. Swiss-Prot
Match: sp|P94044|FER6_MAIZE (Ferredoxin-6, chloroplastic OS=Zea mays OX=4577 GN=FDX6 PE=2 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 9.0e-38
Identity = 83/154 (53.90%), Postives = 100/154 (64.94%), Query Frame = 0


Query: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAF 60
           MST +  +LP      +       +      S  G  R   ++ G      F A A A  
Sbjct: 1   MSTATAPRLPAPRSGASYHYQTTAAPAANTLSFAGHARQAARASGPRLSSRFVASAAAVL 60

Query: 61  -KIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDG 120
            K+KLV P G EHEFEA DDTYIL+AAE AG++LP+SCRAG+CSTCAG++ +G VDQS+G
Sbjct: 61  HKVKLVGPDGTEHEFEAPDDTYILEAAETAGVELPFSCRAGSCSTCAGRMSAGEVDQSEG 120

Query: 121 SFLDDDQMANGYLLTCISLPTADCVIHTHKEGEL 154
           SFLDD QMA GYLLTCIS P ADCVIHTHKE +L
Sbjct: 121 SFLDDGQMAEGYLLTCISYPKADCVIHTHKEEDL 154

[Close]

BLAST of CsaV3_1G014830 vs. Swiss-Prot
Match: sp|P14937|FER2_RAPSA (Ferredoxin, root R-B2 OS=Raphanus sativus OX=3726 PE=1 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 6.4e-36
Identity = 66/96 (68.75%), Postives = 81/96 (84.38%), Query Frame = 0


Query: 58  AAFKIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQS 117
           A +K+KL+ P G+E+EFE  DD +ILDAAEEAG+DLPYSCRAGACSTCAG+IV G VDQS
Sbjct: 2   AVYKVKLIGPEGEENEFEVQDDQFILDAAEEAGVDLPYSCRAGACSTCAGQIVKGQVDQS 61

Query: 118 DGSFLDDDQMANGYLLTCISLPTADCVIHTHKEGEL 154
           +GSFL+DD    G++LTC++ P +DCVIHTHKE EL
Sbjct: 62  EGSFLEDDHFEKGFVLTCVAYPQSDCVIHTHKETEL 97

[Close]

BLAST of CsaV3_1G014830 vs. Swiss-Prot
Match: sp|P00243|FER_SYNY4 (Ferredoxin OS=Synechocystis sp. (strain PCC 6714) OX=1147 PE=1 SV=2)

HSP 1 Score: 149.8 bits (377), Expect = 2.4e-35
Identity = 69/97 (71.13%), Postives = 82/97 (84.54%), Query Frame = 0


Query: 57  MAAFKIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQ 116
           MA++ +KL+ P G E+  E SDDTYILDAAEEAG+DLPYSCRAGACSTCAGKI +GSVDQ
Sbjct: 1   MASYTVKLITPDG-ENSIECSDDTYILDAAEEAGLDLPYSCRAGACSTCAGKITAGSVDQ 60

Query: 117 SDGSFLDDDQMANGYLLTCISLPTADCVIHTHKEGEL 154
           SD SFLDDDQ+  GY+LTC++ PT+DC I THKE +L
Sbjct: 61  SDQSFLDDDQIEAGYVLTCVAYPTSDCTIETHKEEDL 96

[Close]

BLAST of CsaV3_1G014830 vs. TrEMBL
Match: tr|A0A0A0LY90|A0A0A0LY90_CUCSA (Ferredoxin OS=Cucumis sativus OX=3659 GN=Csa_1G163160 PE=3 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 6.8e-83
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAF 60
           MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAF
Sbjct: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAF 60

Query: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGS 120
           KIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGS
Sbjct: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGS 120

Query: 121 FLDDDQMANGYLLTCISLPTADCVIHTHKEGELI 155
           FLDDDQMANGYLLTCISLPTADCVIHTHKEGELI
Sbjct: 121 FLDDDQMANGYLLTCISLPTADCVIHTHKEGELI 154

[Close]

BLAST of CsaV3_1G014830 vs. TrEMBL
Match: tr|A0A2P4M2V0|A0A2P4M2V0_QUESU (Ferredoxin OS=Quercus suber OX=58331 GN=CFP56_70278 PE=3 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 4.2e-56
Identity = 104/153 (67.97%), Postives = 129/153 (84.31%), Query Frame = 0


Query: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAF 60
           MSTM++ KLP+H M+    +N+  S IIKCPSS+GS ++I K+FGL + PSFR  AMA +
Sbjct: 290 MSTMTSVKLPSHCMFRNAPQNRFNSAIIKCPSSLGSVKSISKAFGLKASPSFRVSAMAVY 349

Query: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGS 120
           KIKLV P G+E+EFEA DD YILD+AE AG++LPYSCRAGACSTCAGK+V+GSVDQSDGS
Sbjct: 350 KIKLVGPDGEENEFEAPDDAYILDSAENAGVELPYSCRAGACSTCAGKMVTGSVDQSDGS 409

Query: 121 FLDDDQMANGYLLTCISLPTADCVIHTHKEGEL 154
           FLD++QM  G++LTC+S PTADCVIHTHKEG+L
Sbjct: 410 FLDENQMKEGFVLTCVSYPTADCVIHTHKEGDL 442

[Close]

BLAST of CsaV3_1G014830 vs. TrEMBL
Match: tr|V7AFQ6|V7AFQ6_PHAVU (Ferredoxin OS=Phaseolus vulgaris OX=3885 GN=PHAVU_011G094400g PE=3 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 5.4e-56
Identity = 106/154 (68.83%), Postives = 132/154 (85.71%), Query Frame = 0


Query: 1   MSTMSTAKLPTHFMYNTQSKNQLG-STIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAA 60
           M+T+ST K+ +H M+ T +KNQ   +T +KCPSS+GS +++ +SFGL S  SFR  AMA+
Sbjct: 1   MATLSTVKVSSHCMFQTPNKNQFTLATTVKCPSSLGSVKSVSRSFGLKSSSSFRVTAMAS 60

Query: 61  FKIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDG 120
           +K+KL+ P GKE+EFEASDDTYILDAAE+AG++LPYSCRAGACSTCAGKIV+GSVDQSDG
Sbjct: 61  YKVKLIGPDGKENEFEASDDTYILDAAEDAGVELPYSCRAGACSTCAGKIVAGSVDQSDG 120

Query: 121 SFLDDDQMANGYLLTCISLPTADCVIHTHKEGEL 154
           SFLDD+Q+  G++LTCIS PTADCVI THKEGEL
Sbjct: 121 SFLDDNQLKEGFVLTCISYPTADCVIETHKEGEL 154

[Close]

BLAST of CsaV3_1G014830 vs. TrEMBL
Match: tr|A0A2N9INM6|A0A2N9INM6_FAGSY (Ferredoxin OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS55038 PE=3 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 7.1e-56
Identity = 107/153 (69.93%), Postives = 128/153 (83.66%), Query Frame = 0


Query: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAF 60
           MSTM+  KLP+H M  T  +N+  S IIK PSS+GS ++I K+FGL + PSFRA AMA +
Sbjct: 1   MSTMAAVKLPSHCMVRTAPQNRFNSAIIKRPSSLGSVKSISKAFGLKASPSFRASAMAVY 60

Query: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGS 120
           KIKLV P G+E EFEA DDTYILD+AE AG++LPYSCRAGACS+CAGK+VSGSVDQSDGS
Sbjct: 61  KIKLVGPNGEESEFEAPDDTYILDSAENAGVELPYSCRAGACSSCAGKMVSGSVDQSDGS 120

Query: 121 FLDDDQMANGYLLTCISLPTADCVIHTHKEGEL 154
           FLDD+QM  G++LTC+S PTADCVIHTHKEG+L
Sbjct: 121 FLDDNQMKEGFVLTCVSYPTADCVIHTHKEGDL 153

[Close]

BLAST of CsaV3_1G014830 vs. TrEMBL
Match: tr|A0A151TNV0|A0A151TNV0_CAJCA (Ferredoxin OS=Cajanus cajan OX=3821 GN=KK1_022369 PE=3 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 2.1e-55
Identity = 107/154 (69.48%), Postives = 129/154 (83.77%), Query Frame = 0


Query: 1   MSTMSTAKLPTHFMYNTQSKNQLG-STIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAA 60
           M+T+ST  L  H M+ T SKNQ   ST +KCPSS+GS R++ +SFGL S  SFR  AMA+
Sbjct: 1   MATLSTVNLSPHCMFQTPSKNQSTISTTVKCPSSLGSVRSVSRSFGLKSSSSFRVTAMAS 60

Query: 61  FKIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDG 120
           +K+KL+ P GKE+EFEA+DDTYILDAAE AGI+LPYSCRAGACSTCAGKIV+G+VDQSDG
Sbjct: 61  YKVKLIGPDGKENEFEAADDTYILDAAENAGIELPYSCRAGACSTCAGKIVAGAVDQSDG 120

Query: 121 SFLDDDQMANGYLLTCISLPTADCVIHTHKEGEL 154
           SFLDD+Q+  G+LLTC+S PTADCVI THKEG+L
Sbjct: 121 SFLDDNQLKEGFLLTCVSYPTADCVIETHKEGDL 154

The following BLAST results are available for this feature:

BLAST of CsaV3_1G014830 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN64931.1	1.0e-82	100.00	hypothetical protein Csa_1G163160 [Cucumis sativus]	[more]
XP_022142635.1	1.8e-66	82.47	ferredoxin, root R-B2 [Momordica charantia]	[more]
XP_022944833.1	5.7e-65	82.69	uncharacterized protein LOC111449248 isoform X2 [Cucurbita moschata]	[more]
XP_023541284.1	1.4e-63	81.41	ferredoxin-3, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_022967109.1	1.2e-62	80.77	uncharacterized protein LOC111466612 [Cucurbita maxima] >XP_022967110.1 uncharac...	[more]

BLAST of CsaV3_1G014830 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G27510.1	9.7e-43	55.84	ferredoxin 3	[more]
AT1G10960.1	2.6e-35	50.99	ferredoxin 1	[more]
AT1G60950.1	1.3e-34	53.96	2Fe-2S ferredoxin-like superfamily protein	[more]
AT5G10000.1	5.9e-32	54.87	ferredoxin 4	[more]
AT4G14890.1	1.7e-18	38.00	2Fe-2S ferredoxin-like superfamily protein	[more]

BLAST of CsaV3_1G014830 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P27788\|FER3_MAIZE	3.2e-43	62.88	Ferredoxin-3, chloroplastic OS=Zea mays OX=4577 GN=FDX3 PE=1 SV=1	[more]
sp\|Q9ZQG8\|FER3_ARATH	1.8e-41	55.84	Ferredoxin-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD3 PE=1 SV=1	[more]
sp\|P94044\|FER6_MAIZE	9.0e-38	53.90	Ferredoxin-6, chloroplastic OS=Zea mays OX=4577 GN=FDX6 PE=2 SV=1	[more]
sp\|P14937\|FER2_RAPSA	6.4e-36	68.75	Ferredoxin, root R-B2 OS=Raphanus sativus OX=3726 PE=1 SV=1	[more]
sp\|P00243\|FER_SYNY4	2.4e-35	71.13	Ferredoxin OS=Synechocystis sp. (strain PCC 6714) OX=1147 PE=1 SV=2	[more]

BLAST of CsaV3_1G014830 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LY90\|A0A0A0LY90_CUCSA	6.8e-83	100.00	Ferredoxin OS=Cucumis sativus OX=3659 GN=Csa_1G163160 PE=3 SV=1	[more]
tr\|A0A2P4M2V0\|A0A2P4M2V0_QUESU	4.2e-56	67.97	Ferredoxin OS=Quercus suber OX=58331 GN=CFP56_70278 PE=3 SV=1	[more]
tr\|V7AFQ6\|V7AFQ6_PHAVU	5.4e-56	68.83	Ferredoxin OS=Phaseolus vulgaris OX=3885 GN=PHAVU_011G094400g PE=3 SV=1	[more]
tr\|A0A2N9INM6\|A0A2N9INM6_FAGSY	7.1e-56	69.93	Ferredoxin OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS55038 PE=3 SV=1	[more]
tr\|A0A151TNV0\|A0A151TNV0_CAJCA	2.1e-55	69.48	Ferredoxin OS=Cajanus cajan OX=3821 GN=KK1_022369 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0051536	iron-sulfur cluster binding
GO:0051537	2 iron, 2 sulfur cluster binding
GO:0009055	electron carrier activity

Vocabulary: **Biological Process**
Term	Definition
GO:0022900	electron transport chain

Vocabulary: **INTERPRO**
Term	Definition
IPR036010	2Fe-2S_ferredoxin-like_sf
IPR006058	2Fe2S_fd_BS
IPR012675	Beta-grasp_dom_sf
IPR001041	2Fe-2S_ferredoxin-type
IPR010241	Fd_pln

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0009055	electron carrier activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0051536	iron-sulfur cluster binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G014830.1	CsaV3_1G014830.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010241	Ferredoxin [2Fe-2S], plant	TIGRFAM	TIGR02008	TIGR02008	coord: 59..153 e-value: 3.3E-46 score: 153.0
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PFAM	PF00111	Fer2	coord: 66..140 e-value: 5.6E-22 score: 77.4
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PROSITE	PS51085	2FE2S_FER_2	coord: 60..151 score: 12.68
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	CDD	cd00207	fer2	coord: 65..146 e-value: 3.8117E-32 score: 110.562
IPR012675	Beta-grasp domain superfamily	GENE3D	G3DSA:3.10.20.30		coord: 57..154 e-value: 8.4E-32 score: 111.0
None	No IPR available	PANTHER	PTHR43112:SF12	SUBFAMILY NOT NAMED	coord: 3..153
None	No IPR available	PANTHER	PTHR43112	FAMILY NOT NAMED	coord: 3..153
IPR006058	2Fe-2S ferredoxin, iron-sulphur binding site	PROSITE	PS00197	2FE2S_FER_1	coord: 97..105
IPR036010	2Fe-2S ferredoxin-like superfamily	SUPERFAMILY	SSF54292	2Fe-2S ferredoxin-like	coord: 49..151

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_1G014830	CSPI01G14710	Wild cucumber (PI 183967)	cpicucB001
CsaV3_1G014830	Cucsa.199720	Cucumber (Gy14) v1	cgycucB322
CsaV3_1G014830	CmoCh18G006650	Cucurbita moschata (Rifu)	cmocucB0460
CsaV3_1G014830	Cp4.1LG09g05620	Cucurbita pepo (Zucchini)	cpecucB0024
CsaV3_1G014830	CsGy1G014590	Cucumber (Gy14) v2	cgybcucB002
CsaV3_1G014830	Carg26273	Silver-seed gourd	carcucB0000
CsaV3_1G014830	MELO3C004712	Melon (DHL92) v3.5.1	cucmeB010
CsaV3_1G014830	ClCG01G012230	Watermelon (Charleston Gray)	cucwcgB026
CsaV3_1G014830	MELO3C004712.2	Melon (DHL92) v3.6.1	cucmedB009
CsaV3_1G014830	Cla97C01G011570	Watermelon (97103) v2	cucwmbB008
CsaV3_1G014830	Bhi08G000048	Wax gourd	cucwgoB051

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_1G014830	Cucurbita maxima (Rimu)	cmacucB0234
CsaV3_1G014830	Cucurbita maxima (Rimu)	cmacucB0473
CsaV3_1G014830	Cucurbita maxima (Rimu)	cmacucB0476
CsaV3_1G014830	Cucurbita maxima (Rimu)	cmacucB0694
CsaV3_1G014830	Cucurbita maxima (Rimu)	cmacucB0962
CsaV3_1G014830	Cucurbita moschata (Rifu)	cmocucB0951
CsaV3_1G014830	Cucurbita pepo (Zucchini)	cpecucB1044
CsaV3_1G014830	Bottle gourd (USVL1VR-Ls)	cuclsiB005
CsaV3_1G014830	Bottle gourd (USVL1VR-Ls)	cuclsiB021
CsaV3_1G014830	Bottle gourd (USVL1VR-Ls)	cuclsiB048
CsaV3_1G014830	Melon (DHL92) v3.5.1	cucmeB072
CsaV3_1G014830	Watermelon (Charleston Gray)	cucwcgB030
CsaV3_1G014830	Watermelon (97103) v1	cucwmB009
CsaV3_1G014830	Watermelon (97103) v1	cucwmB049
CsaV3_1G014830	Watermelon (97103) v1	cucwmB063
CsaV3_1G014830	Watermelon (97103) v1	cucwmB074
CsaV3_1G014830	Watermelon (97103) v2	cucwmbB025
CsaV3_1G014830	Cucumber (Chinese Long) v3	cuccucB046