Csa1G163160 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa1G163160
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Ferredoxin; contains IPR010241 (Ferredoxin [2Fe-2S], plant), IPR012675 (Beta-grasp domain)
Location	Chr1 : 10225526 .. 10227330 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCTATATATATATATATATATTGCCCTAATATTCGCATCCTTCAACCACTTACGTCTCCCTTTTGATTTCCTGTCCTTGCTTTCTCCGCTGCCTCTCTCTTTCTGTAAGCTTCTCTTCCCCCATTTCCTTCCTTCGTTTATATGTTCTTTCTATCTTTTGCTATGAAAATCAACTAATTTGCTTCTCAACATATTTGTTCTCTAACCATCTCCCTCATCAAAATGCCCTTTTCCTTTTACCATTTCGCTATTTACTGTATTTCCTCATTTCCCATATTCTCTTCTCTTTTTACATCACTGCCTTTATTTTTGTTGCTTTCGATCGTTTTAGTTAGATAATATCAATCTGTGCTAACTTCTGTTTCTTCAAATAAAACCTTTGGATTCTGTTGACATTTTGTTCTTAACTAATGCAACTGATCTGGGTTGGAATTGAATGGTTTTGTTCATTACTTATGGAGCTTCGAGTGAAGAGCAGATAAAGCCCTTAGGTTGCATCTTCTCATAATGCTCCATACACCAATTTGCCTCCATTAACATTGAATAGCTTTCTGCTGTGCTACCTCATTTGTTCTTTCAAGAGGCATACAAAATCACTGAACCTATCATTTATTGCATTCGTTTCTCTATGCTCTGAATTGAAACACTCGATGCTTAGTTTTCACACACACGCAAATACTCCATTGCTGTTAAATGATACAACAGTTAATTTACTCTTAAGCTTAAGCATTTGAGTCAATAGGTGTTTTATAACGTTGCTGGAGCAGAGAGCAGATCCTATTTCAAACTCGTCCATTGTTATTTCCTTCTCAATTTACATCGATGTCGATTTCTATTTGTTGGTTCTTCTAAAATTAGAAGATATAATATTAAGTTTACCTTCCCTCCATTAGTTTAAGCTTTTGGGTCAATTGGTGTTTTAAGAATTAGAAAGGTAAATGAAGAAATCAAGTATTTTCTGCTGAATTGTGAGATAAAATGAAAAAGAAAATGGTTCTGCATTTTTCATACCTCTGCCATATGGAGGTTCATTGTTAGAGTATGATCATCATCCATTCTGGTGCTTGTTGGATGTGCTCTATATTCTAAATATTCTGTTTGATCTTTTGTTACTTGCTTGTTCCCCGGTGTAGCCTTTATTTTTCTCACATGCTTTTAGGTTTTGATTGATTTGATTTGTAAACCACACCCGTTTAAATGTGTTTCATGAATTTAGGAGCAGAAATGTCAACCATGTCAACTGCAAAGCTCCCTACCCACTTCATGTACAACACACAATCTAAAAATCAACTCGGTAGCACCATCATCAAGTGTCCATCGTCAATTGGATCTACGAGAAACATTTTGAAATCCTTTGGCTTGAATTCACGTCCCTCATTCAGAGCCTGTGCAATGGCAGCTTTCAAAATTAAACTTGTCGAACCATGTGGGAAAGAGCATGAGTTTGAGGCATCTGATGATACTTATATTCTTGATGCAGCTGAAGAAGCGGGAATAGACTTACCTTATTCTTGCAGGGCAGGTGCGTGTTCTACGTGTGCTGGGAAAATAGTTTCGGGTTCGGTTGATCAATCAGACGGGTCATTCCTTGACGATGATCAAATGGCAAATGGTTACTTGTTAACCTGTATTTCACTCCCAACTGCAGATTGTGTGATTCACACACACAAAGAAGGAGAACTGATCTGAGTATGATAGTTTGAATGATACAGAGTGTTTTCTTGTCTAATGGTTTTCATTTGTAATGTCATATTATTAAAAAATGAAAAAAATGAAAAAATAAATCAAATGTGTGAACTTTCT

mRNA sequence

ATGTCAACCATGTCAACTGCAAAGCTCCCTACCCACTTCATGTACAACACACAATCTAAAAATCAACTCGGTAGCACCATCATCAAGTGTCCATCGTCAATTGGATCTACGAGAAACATTTTGAAATCCTTTGGCTTGAATTCACGTCCCTCATTCAGAGCCTGTGCAATGGCAGCTTTCAAAATTAAACTTGTCGAACCATGTGGGAAAGAGCATGAGTTTGAGGCATCTGATGATACTTATATTCTTGATGCAGCTGAAGAAGCGGGAATAGACTTACCTTATTCTTGCAGGGCAGGTGCGTGTTCTACGTGTGCTGGGAAAATAGTTTCGGGTTCGGTTGATCAATCAGACGGGTCATTCCTTGACGATGATCAAATGGCAAATGGTTACTTGTTAACCTGTATTTCACTCCCAACTGCAGATTGTGTGATTCACACACACAAAGAAGGAGAACTGATCTGA

Coding sequence (CDS)

ATGTCAACCATGTCAACTGCAAAGCTCCCTACCCACTTCATGTACAACACACAATCTAAAAATCAACTCGGTAGCACCATCATCAAGTGTCCATCGTCAATTGGATCTACGAGAAACATTTTGAAATCCTTTGGCTTGAATTCACGTCCCTCATTCAGAGCCTGTGCAATGGCAGCTTTCAAAATTAAACTTGTCGAACCATGTGGGAAAGAGCATGAGTTTGAGGCATCTGATGATACTTATATTCTTGATGCAGCTGAAGAAGCGGGAATAGACTTACCTTATTCTTGCAGGGCAGGTGCGTGTTCTACGTGTGCTGGGAAAATAGTTTCGGGTTCGGTTGATCAATCAGACGGGTCATTCCTTGACGATGATCAAATGGCAAATGGTTACTTGTTAACCTGTATTTCACTCCCAACTGCAGATTGTGTGATTCACACACACAAAGAAGGAGAACTGATCTGA

Protein sequence

MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAFKIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGSFLDDDQMANGYLLTCISLPTADCVIHTHKEGELI*

Homology

[Close]

BLAST of Csa1G163160 vs. Swiss-Prot
Match: FER3_MAIZE (Ferredoxin-3, chloroplastic OS=Zea mays GN=FDX3 PE=2 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 9.1e-43
Identity = 83/132 (62.88%), Postives = 95/132 (71.97%), Query Frame = 1


Query: 22  QLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAFKIKLVEPCGKEHEFEASDDTY 81
           Q   T +K PSS+     + K   L +       AMA +K+KLV P G+EHEF+A DD Y
Sbjct: 20  QASQTAVKSPSSLSFFSQVTKVPSLKTSKKLDVSAMAVYKVKLVGPEGEEHEFDAPDDAY 79

Query: 82  ILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGSFLDDDQMANGYLLTCISLPTA 141
           ILDAAE AG++LPYSCRAGACSTCAGKI SGSVDQSDGSFLDD Q   GY+LTC+S P +
Sbjct: 80  ILDAAETAGVELPYSCRAGACSTCAGKIESGSVDQSDGSFLDDGQQEEGYVLTCVSYPKS 139

Query: 142 DCVIHTHKEGEL 154
           DCVIHTHKEG+L
Sbjct: 140 DCVIHTHKEGDL 151

[Close]

BLAST of Csa1G163160 vs. Swiss-Prot
Match: FER3_ARATH (Ferredoxin-3, chloroplastic OS=Arabidopsis thaliana GN=FD3 PE=1 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 2.3e-41
Identity = 86/154 (55.84%), Postives = 109/154 (70.78%), Query Frame = 1


Query: 4   MSTAKLPTHFMYNTQSKNQLGSTIIKCPS---SIGSTRNILKSFGLN-SRPSFRACAMAA 63
           M+T ++ +  M     ++Q  + +I   S   S+GST+ + +SFGL  S  S  A   A 
Sbjct: 1   MATVRISSTSMTKAVLRSQTTNKLITNKSYNLSVGSTKRVSRSFGLKCSANSGGATMSAV 60

Query: 64  FKIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDG 123
           +K+KL+ P G+E EFE  DD YILDAAEEAG+DLPYSCRAGACSTCAG+IVSG+VDQSDG
Sbjct: 61  YKVKLLGPDGQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGACSTCAGQIVSGNVDQSDG 120

Query: 124 SFLDDDQMANGYLLTCISLPTADCVIHTHKEGEL 154
           SFL+D  +  GY+LTC++ P +DCVIHTHKE EL
Sbjct: 121 SFLEDSHLEKGYVLTCVAYPQSDCVIHTHKETEL 154

[Close]

BLAST of Csa1G163160 vs. Swiss-Prot
Match: FER6_MAIZE (Ferredoxin-6, chloroplastic OS=Zea mays GN=FDX6 PE=2 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 8.9e-38
Identity = 83/154 (53.90%), Postives = 98/154 (63.64%), Query Frame = 1


Query: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAF 60
           MST +  +LP      +       +      S  G  R   ++ G      F A A A  
Sbjct: 1   MSTATAPRLPAPRSGASYHYQTTAAPAANTLSFAGHARQAARASGPRLSSRFVASAAAVL 60

Query: 61  -KIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDG 120
            K+KLV P G EHEFEA DDTYIL+AAE AG++LP+SCRAG+CSTCAG++ +G VDQS+G
Sbjct: 61  HKVKLVGPDGTEHEFEAPDDTYILEAAETAGVELPFSCRAGSCSTCAGRMSAGEVDQSEG 120

Query: 121 SFLDDDQMANGYLLTCISLPTADCVIHTHKEGEL 154
           SFLDD QMA GYLLTCIS P ADCVIHTHKE +L
Sbjct: 121 SFLDDGQMAEGYLLTCISYPKADCVIHTHKEEDL 154

[Close]

BLAST of Csa1G163160 vs. Swiss-Prot
Match: FER2_RAPSA (Ferredoxin, root R-B2 OS=Raphanus sativus PE=1 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 2.4e-35
Identity = 66/96 (68.75%), Postives = 79/96 (82.29%), Query Frame = 1


Query: 58  AAFKIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQS 117
           A +K+KL+ P G+E+EFE  DD +ILDAAEEAG+DLPYSCRAGACSTCAG+IV G VDQS
Sbjct: 2   AVYKVKLIGPEGEENEFEVQDDQFILDAAEEAGVDLPYSCRAGACSTCAGQIVKGQVDQS 61

Query: 118 DGSFLDDDQMANGYLLTCISLPTADCVIHTHKEGEL 154
           +GSFL+DD    G++LTC++ P +DCVIHTHKE EL
Sbjct: 62  EGSFLEDDHFEKGFVLTCVAYPQSDCVIHTHKETEL 97

[Close]

BLAST of Csa1G163160 vs. Swiss-Prot
Match: FER_SYNY4 (Ferredoxin OS=Synechocystis sp. (strain PCC 6714) PE=1 SV=2)

HSP 1 Score: 147.9 bits (372), Expect = 9.2e-35
Identity = 69/97 (71.13%), Postives = 80/97 (82.47%), Query Frame = 1


Query: 57  MAAFKIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQ 116
           MA++ +KL+ P G E+  E SDDTYILDAAEEAG+DLPYSCRAGACSTCAGKI +GSVDQ
Sbjct: 1   MASYTVKLITPDG-ENSIECSDDTYILDAAEEAGLDLPYSCRAGACSTCAGKITAGSVDQ 60

Query: 117 SDGSFLDDDQMANGYLLTCISLPTADCVIHTHKEGEL 154
           SD SFLDDDQ+  GY+LTC++ PT+DC I THKE +L
Sbjct: 61  SDQSFLDDDQIEAGYVLTCVAYPTSDCTIETHKEEDL 96

[Close]

BLAST of Csa1G163160 vs. TrEMBL
Match: A0A0A0LY90_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G163160 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 3.7e-83
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 1


Query: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAF 60
           MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAF
Sbjct: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAF 60

Query: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGS 120
           KIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGS
Sbjct: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGS 120

Query: 121 FLDDDQMANGYLLTCISLPTADCVIHTHKEGELI 155
           FLDDDQMANGYLLTCISLPTADCVIHTHKEGELI
Sbjct: 121 FLDDDQMANGYLLTCISLPTADCVIHTHKEGELI 154

[Close]

BLAST of Csa1G163160 vs. TrEMBL
Match: V7AFQ6_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G094400g PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 2.9e-56
Identity = 106/154 (68.83%), Postives = 132/154 (85.71%), Query Frame = 1


Query: 1   MSTMSTAKLPTHFMYNTQSKNQLG-STIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAA 60
           M+T+ST K+ +H M+ T +KNQ   +T +KCPSS+GS +++ +SFGL S  SFR  AMA+
Sbjct: 1   MATLSTVKVSSHCMFQTPNKNQFTLATTVKCPSSLGSVKSVSRSFGLKSSSSFRVTAMAS 60

Query: 61  FKIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDG 120
           +K+KL+ P GKE+EFEASDDTYILDAAE+AG++LPYSCRAGACSTCAGKIV+GSVDQSDG
Sbjct: 61  YKVKLIGPDGKENEFEASDDTYILDAAEDAGVELPYSCRAGACSTCAGKIVAGSVDQSDG 120

Query: 121 SFLDDDQMANGYLLTCISLPTADCVIHTHKEGEL 154
           SFLDD+Q+  G++LTCIS PTADCVI THKEGEL
Sbjct: 121 SFLDDNQLKEGFVLTCISYPTADCVIETHKEGEL 154

[Close]

BLAST of Csa1G163160 vs. TrEMBL
Match: A0A151TNV0_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_022369 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.1e-55
Identity = 107/154 (69.48%), Postives = 129/154 (83.77%), Query Frame = 1


Query: 1   MSTMSTAKLPTHFMYNTQSKNQLG-STIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAA 60
           M+T+ST  L  H M+ T SKNQ   ST +KCPSS+GS R++ +SFGL S  SFR  AMA+
Sbjct: 1   MATLSTVNLSPHCMFQTPSKNQSTISTTVKCPSSLGSVRSVSRSFGLKSSSSFRVTAMAS 60

Query: 61  FKIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDG 120
           +K+KL+ P GKE+EFEA+DDTYILDAAE AGI+LPYSCRAGACSTCAGKIV+G+VDQSDG
Sbjct: 61  YKVKLIGPDGKENEFEAADDTYILDAAENAGIELPYSCRAGACSTCAGKIVAGAVDQSDG 120

Query: 121 SFLDDDQMANGYLLTCISLPTADCVIHTHKEGEL 154
           SFLDD+Q+  G+LLTC+S PTADCVI THKEG+L
Sbjct: 121 SFLDDNQLKEGFLLTCVSYPTADCVIETHKEGDL 154

[Close]

BLAST of Csa1G163160 vs. TrEMBL
Match: F6HHG1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0080g00410 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 3.3e-55
Identity = 103/150 (68.67%), Postives = 125/150 (83.33%), Query Frame = 1


Query: 4   MSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAFKIK 63
           MST  LPTH M+ + ++N++ S  I+ PSS+GS ++I K+FGL S P FRA AMA +KIK
Sbjct: 30  MSTVNLPTHCMFRSATQNRIASAFIRSPSSLGSVKSISKAFGLKSSPCFRATAMAVYKIK 89

Query: 64  LVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGSFLD 123
           L+ P G+EHEF+A DD YILD+AE AG++LPYSCRAGACSTCAG++VSGSVDQSDGSFLD
Sbjct: 90  LIGPEGEEHEFDAPDDAYILDSAENAGVELPYSCRAGACSTCAGQMVSGSVDQSDGSFLD 149

Query: 124 DDQMANGYLLTCISLPTADCVIHTHKEGEL 154
           D QM  GYLLTCIS PT+DCVIHTHKEG+L
Sbjct: 150 DKQMEKGYLLTCISYPTSDCVIHTHKEGDL 179

[Close]

BLAST of Csa1G163160 vs. TrEMBL
Match: A5B3C7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_038770 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 5.6e-55
Identity = 103/150 (68.67%), Postives = 124/150 (82.67%), Query Frame = 1


Query: 4   MSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAFKIK 63
           MST  LPTH M+ + ++N + S  I+ PSS+GS ++I K+FGL S P FRA AMA +KIK
Sbjct: 1   MSTVNLPTHCMFRSATQNXIASAFIRSPSSLGSVKSISKAFGLKSSPCFRATAMAVYKIK 60

Query: 64  LVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGSFLD 123
           L+ P G+EHEF+A DD YILD+AE AG++LPYSCRAGACSTCAG++VSGSVDQSDGSFLD
Sbjct: 61  LIGPEGEEHEFDAPDDAYILDSAENAGVELPYSCRAGACSTCAGQMVSGSVDQSDGSFLD 120

Query: 124 DDQMANGYLLTCISLPTADCVIHTHKEGEL 154
           D QM  GYLLTCIS PT+DCVIHTHKEG+L
Sbjct: 121 DKQMEKGYLLTCISYPTSDCVIHTHKEGDL 150

[Close]

BLAST of Csa1G163160 vs. TAIR10
Match: AT2G27510.1 (AT2G27510.1 ferredoxin 3)

HSP 1 Score: 169.9 bits (429), Expect = 1.3e-42
Identity = 86/154 (55.84%), Postives = 109/154 (70.78%), Query Frame = 1


Query: 4   MSTAKLPTHFMYNTQSKNQLGSTIIKCPS---SIGSTRNILKSFGLN-SRPSFRACAMAA 63
           M+T ++ +  M     ++Q  + +I   S   S+GST+ + +SFGL  S  S  A   A 
Sbjct: 1   MATVRISSTSMTKAVLRSQTTNKLITNKSYNLSVGSTKRVSRSFGLKCSANSGGATMSAV 60

Query: 64  FKIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDG 123
           +K+KL+ P G+E EFE  DD YILDAAEEAG+DLPYSCRAGACSTCAG+IVSG+VDQSDG
Sbjct: 61  YKVKLLGPDGQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGACSTCAGQIVSGNVDQSDG 120

Query: 124 SFLDDDQMANGYLLTCISLPTADCVIHTHKEGEL 154
           SFL+D  +  GY+LTC++ P +DCVIHTHKE EL
Sbjct: 121 SFLEDSHLEKGYVLTCVAYPQSDCVIHTHKETEL 154

[Close]

BLAST of Csa1G163160 vs. TAIR10
Match: AT1G10960.1 (AT1G10960.1 ferredoxin 1)

HSP 1 Score: 146.0 bits (367), Expect = 2.0e-35
Identity = 77/151 (50.99%), Postives = 99/151 (65.56%), Query Frame = 1


Query: 2   STMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSF--RACAMAA 61
           + +S+A + T F+   Q+   L S       S+         FGL S  +   R  AMA 
Sbjct: 4   TALSSAIVSTSFLRRQQTPISLRSLPFANTQSL---------FGLKSSTARGGRVTAMAT 63

Query: 62  FKIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDG 121
           +K+K + P G E E E  +D Y+LDAAEEAG+DLPYSCRAG+CS+CAGK+VSGS+DQSD 
Sbjct: 64  YKVKFITPEG-EQEVECEEDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQ 123

Query: 122 SFLDDDQMANGYLLTCISLPTADCVIHTHKE 151
           SFLDD+QM+ GY+LTC++ PT+D VI THKE
Sbjct: 124 SFLDDEQMSEGYVLTCVAYPTSDVVIETHKE 144

[Close]

BLAST of Csa1G163160 vs. TAIR10
Match: AT1G60950.1 (AT1G60950.1 2Fe-2S ferredoxin-like superfamily protein)

HSP 1 Score: 142.1 bits (357), Expect = 2.8e-34
Identity = 75/139 (53.96%), Postives = 96/139 (69.06%), Query Frame = 1


Query: 23  LGSTIIK---CPSSIGS--TRNILKSFGLNSRPSF--RACAMAAFKIKLVEPCGKEHEFE 82
           +G++ I+    P S+ S  + N    FGL S  +   R  AMA +K+K + P G E E E
Sbjct: 11  VGTSFIRRSPAPISLRSLPSANTQSLFGLKSGTARGGRVTAMATYKVKFITPEG-ELEVE 70

Query: 83  ASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGSFLDDDQMANGYLLTC 142
             DD Y+LDAAEEAGIDLPYSCRAG+CS+CAGK+VSGSVDQSD SFLDD+Q+  G++LTC
Sbjct: 71  CDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSFLDDEQIGEGFVLTC 130

Query: 143 ISLPTADCVIHTHKEGELI 155
            + PT+D  I THKE +++
Sbjct: 131 AAYPTSDVTIETHKEEDIV 148

[Close]

BLAST of Csa1G163160 vs. TAIR10
Match: AT5G10000.1 (AT5G10000.1 ferredoxin 4)

HSP 1 Score: 132.5 bits (332), Expect = 2.2e-31
Identity = 62/113 (54.87%), Postives = 85/113 (75.22%), Query Frame = 1


Query: 44  FGLNS-RPSF-RACAMAAFKIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGA 103
           FGL+S R +F +  A  + K+KL+ P G+E E E ++D  IL++AE AG++LPYSCR+G 
Sbjct: 36  FGLSSSRGNFGKVFAKESRKVKLISPEGEEQEIEGNEDCCILESAENAGLELPYSCRSGT 95

Query: 104 CSTCAGKIVSGSVDQSDGSFLDDDQMANGYLLTCISLPTADCVIHTHKEGELI 155
           C TC GK+VSG VDQS GSFL+++Q+  GY+LTCI+LP  DCV++THK+ +LI
Sbjct: 96  CGTCCGKLVSGKVDQSLGSFLEEEQIQKGYILTCIALPLEDCVVYTHKQSDLI 148

[Close]

BLAST of Csa1G163160 vs. TAIR10
Match: AT4G14890.1 (AT4G14890.1 2Fe-2S ferredoxin-like superfamily protein)

HSP 1 Score: 89.4 bits (220), Expect = 2.2e-18
Identity = 57/150 (38.00%), Postives = 78/150 (52.00%), Query Frame = 1


Query: 5   STAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAFKIKL 64
           ST  LP  ++ N+ S     +T+    S+  + RN L +  + +R         A+K+ +
Sbjct: 11  STISLPKPYLSNSFSFPLRNATL----STTTNRRNFLTTGRIIAR---------AYKV-V 70

Query: 65  VEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGSFLDD 124
           VE  GK  E E   D  IL  A ++G+D+PY C  G C TC  K+V+G+VDQS G  L D
Sbjct: 71  VEHDGKTTELEVEPDETILSKALDSGLDVPYDCNLGVCMTCPAKLVTGTVDQS-GGMLSD 130

Query: 125 DQMANGYLLTCISLPTADCVIHTHKEGELI 155
           D +  GY L C S PT+DC I    E EL+
Sbjct: 131 DVVERGYTLLCASYPTSDCHIKMIPEEELL 145

[Close]

BLAST of Csa1G163160 vs. NCBI nr
Match: gi|700209835|gb|KGN64931.1| (hypothetical protein Csa_1G163160 [Cucumis sativus])

HSP 1 Score: 315.5 bits (807), Expect = 5.3e-83
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 1


Query: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAF 60
           MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAF
Sbjct: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAF 60

Query: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGS 120
           KIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGS
Sbjct: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGS 120

Query: 121 FLDDDQMANGYLLTCISLPTADCVIHTHKEGELI 155
           FLDDDQMANGYLLTCISLPTADCVIHTHKEGELI
Sbjct: 121 FLDDDQMANGYLLTCISLPTADCVIHTHKEGELI 154

[Close]

BLAST of Csa1G163160 vs. NCBI nr
Match: gi|659071691|ref|XP_008461439.1| (PREDICTED: ferredoxin, root R-B2 [Cucumis melo])

HSP 1 Score: 298.9 bits (764), Expect = 5.1e-78
Identity = 146/154 (94.81%), Postives = 149/154 (96.75%), Query Frame = 1


Query: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAF 60
           MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNI KSFGLNSRPSFRA AMA F
Sbjct: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNIWKSFGLNSRPSFRARAMAVF 60

Query: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGS 120
           KIKLVEPCGKEHEFEASDDTYILDAAEEAG+DLPYSCRAGACSTCAGKIVSGSV+QSDGS
Sbjct: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKIVSGSVNQSDGS 120

Query: 121 FLDDDQMANGYLLTCISLPTADCVIHTHKEGELI 155
           FLDDDQMA GYLLTC+SLPTADCVIHTHKE ELI
Sbjct: 121 FLDDDQMAKGYLLTCVSLPTADCVIHTHKEEELI 154

[Close]

BLAST of Csa1G163160 vs. NCBI nr
Match: gi|593203955|ref|XP_007132438.1| (hypothetical protein PHAVU_011G094400g [Phaseolus vulgaris])

HSP 1 Score: 226.1 bits (575), Expect = 4.2e-56
Identity = 106/154 (68.83%), Postives = 132/154 (85.71%), Query Frame = 1


Query: 1   MSTMSTAKLPTHFMYNTQSKNQLG-STIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAA 60
           M+T+ST K+ +H M+ T +KNQ   +T +KCPSS+GS +++ +SFGL S  SFR  AMA+
Sbjct: 1   MATLSTVKVSSHCMFQTPNKNQFTLATTVKCPSSLGSVKSVSRSFGLKSSSSFRVTAMAS 60

Query: 61  FKIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDG 120
           +K+KL+ P GKE+EFEASDDTYILDAAE+AG++LPYSCRAGACSTCAGKIV+GSVDQSDG
Sbjct: 61  YKVKLIGPDGKENEFEASDDTYILDAAEDAGVELPYSCRAGACSTCAGKIVAGSVDQSDG 120

Query: 121 SFLDDDQMANGYLLTCISLPTADCVIHTHKEGEL 154
           SFLDD+Q+  G++LTCIS PTADCVI THKEGEL
Sbjct: 121 SFLDDNQLKEGFVLTCISYPTADCVIETHKEGEL 154

[Close]

BLAST of Csa1G163160 vs. NCBI nr
Match: gi|1012357543|gb|KYP68728.1| (hypothetical protein KK1_022369 [Cajanus cajan])

HSP 1 Score: 224.2 bits (570), Expect = 1.6e-55
Identity = 107/154 (69.48%), Postives = 129/154 (83.77%), Query Frame = 1


Query: 1   MSTMSTAKLPTHFMYNTQSKNQLG-STIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAA 60
           M+T+ST  L  H M+ T SKNQ   ST +KCPSS+GS R++ +SFGL S  SFR  AMA+
Sbjct: 1   MATLSTVNLSPHCMFQTPSKNQSTISTTVKCPSSLGSVRSVSRSFGLKSSSSFRVTAMAS 60

Query: 61  FKIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDG 120
           +K+KL+ P GKE+EFEA+DDTYILDAAE AGI+LPYSCRAGACSTCAGKIV+G+VDQSDG
Sbjct: 61  YKVKLIGPDGKENEFEAADDTYILDAAENAGIELPYSCRAGACSTCAGKIVAGAVDQSDG 120

Query: 121 SFLDDDQMANGYLLTCISLPTADCVIHTHKEGEL 154
           SFLDD+Q+  G+LLTC+S PTADCVI THKEG+L
Sbjct: 121 SFLDDNQLKEGFLLTCVSYPTADCVIETHKEGDL 154

[Close]

BLAST of Csa1G163160 vs. NCBI nr
Match: gi|731394574|ref|XP_010651884.1| (PREDICTED: ferredoxin-3, chloroplastic [Vitis vinifera])

HSP 1 Score: 222.6 bits (566), Expect = 4.7e-55
Identity = 103/150 (68.67%), Postives = 125/150 (83.33%), Query Frame = 1


Query: 4   MSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAFKIK 63
           MST  LPTH M+ + ++N++ S  I+ PSS+GS ++I K+FGL S P FRA AMA +KIK
Sbjct: 46  MSTVNLPTHCMFRSATQNRIASAFIRSPSSLGSVKSISKAFGLKSSPCFRATAMAVYKIK 105

Query: 64  LVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGSFLD 123
           L+ P G+EHEF+A DD YILD+AE AG++LPYSCRAGACSTCAG++VSGSVDQSDGSFLD
Sbjct: 106 LIGPEGEEHEFDAPDDAYILDSAENAGVELPYSCRAGACSTCAGQMVSGSVDQSDGSFLD 165

Query: 124 DDQMANGYLLTCISLPTADCVIHTHKEGEL 154
           D QM  GYLLTCIS PT+DCVIHTHKEG+L
Sbjct: 166 DKQMEKGYLLTCISYPTSDCVIHTHKEGDL 195

The following BLAST results are available for this feature:

BLAST of Csa1G163160 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FER3_MAIZE	9.1e-43	62.88	Ferredoxin-3, chloroplastic OS=Zea mays GN=FDX3 PE=2 SV=1	[more]
FER3_ARATH	2.3e-41	55.84	Ferredoxin-3, chloroplastic OS=Arabidopsis thaliana GN=FD3 PE=1 SV=1	[more]
FER6_MAIZE	8.9e-38	53.90	Ferredoxin-6, chloroplastic OS=Zea mays GN=FDX6 PE=2 SV=1	[more]
FER2_RAPSA	2.4e-35	68.75	Ferredoxin, root R-B2 OS=Raphanus sativus PE=1 SV=1	[more]
FER_SYNY4	9.2e-35	71.13	Ferredoxin OS=Synechocystis sp. (strain PCC 6714) PE=1 SV=2	[more]

BLAST of Csa1G163160 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LY90_CUCSA	3.7e-83	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G163160 PE=4 SV=1	[more]
V7AFQ6_PHAVU	2.9e-56	68.83	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G094400g PE=4 SV=1	[more]
A0A151TNV0_CAJCA	1.1e-55	69.48	Uncharacterized protein OS=Cajanus cajan GN=KK1_022369 PE=4 SV=1	[more]
F6HHG1_VITVI	3.3e-55	68.67	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0080g00410 PE=4 SV=...	[more]
A5B3C7_VITVI	5.6e-55	68.67	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_038770 PE=4 SV=1	[more]

BLAST of Csa1G163160 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G27510.1	1.3e-42	55.84	ferredoxin 3	[more]
AT1G10960.1	2.0e-35	50.99	ferredoxin 1	[more]
AT1G60950.1	2.8e-34	53.96	2Fe-2S ferredoxin-like superfamily protein	[more]
AT5G10000.1	2.2e-31	54.87	ferredoxin 4	[more]
AT4G14890.1	2.2e-18	38.00	2Fe-2S ferredoxin-like superfamily protein	[more]

BLAST of Csa1G163160 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700209835\|gb\|KGN64931.1\|	5.3e-83	100.00	hypothetical protein Csa_1G163160 [Cucumis sativus]	[more]
gi\|659071691\|ref\|XP_008461439.1\|	5.1e-78	94.81	PREDICTED: ferredoxin, root R-B2 [Cucumis melo]	[more]
gi\|593203955\|ref\|XP_007132438.1\|	4.2e-56	68.83	hypothetical protein PHAVU_011G094400g [Phaseolus vulgaris]	[more]
gi\|1012357543\|gb\|KYP68728.1\|	1.6e-55	69.48	hypothetical protein KK1_022369 [Cajanus cajan]	[more]
gi\|731394574\|ref\|XP_010651884.1\|	4.7e-55	68.67	PREDICTED: ferredoxin-3, chloroplastic [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001041	2Fe-2S_ferredoxin-type
IPR006058	2Fe2S_fd_BS
IPR010241	Fd_pln
IPR012675	Beta-grasp_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0009055	electron carrier activity
GO:0051536	iron-sulfur cluster binding
GO:0051537	2 iron, 2 sulfur cluster binding

Vocabulary: **Biological Process**
Term	Definition
GO:0022900	electron transport chain

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0009055	electron carrier activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0051536	iron-sulfur cluster binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU111209	cucumber EST collection version 3.0	transcribed_cluster
CU117836	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa1G163160.1	Csa1G163160.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU117836	CU117836	transcribed_cluster
CU111209	CU111209	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PFAM	PF00111	Fer2	coord: 66..140 score: 5.5
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PROFILE	PS51085	2FE2S_FER_2	coord: 60..151 score: 1
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	unknown	SSF54292	2Fe-2S ferredoxin-like	coord: 49..151 score: 1.44
IPR006058	2Fe-2S ferredoxin, iron-sulphur binding site	PROSITE	PS00197	2FE2S_FER_1	coord: 97..105 scor
IPR010241	Ferredoxin [2Fe-2S], plant	TIGRFAMs	TIGR02008	TIGR02008	coord: 59..153 score: 3.3
IPR012675	Beta-grasp domain	GENE3D	G3DSA:3.10.20.30		coord: 65..153 score: 3.1
None	No IPR available	PANTHER	PTHR19370	NADH-CYTOCHROME B5 REDUCTASE	coord: 4..153 score: 1.0
None	No IPR available	PANTHER	PTHR19370:SF127	SUBFAMILY NOT NAMED	coord: 4..153 score: 1.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa1G163160	MELO3C004712	Melon (DHL92) v3.5.1	cumeB015
Csa1G163160	ClCG01G012230	Watermelon (Charleston Gray)	cuwcgB024
Csa1G163160	Lsi03G001200	Bottle gourd (USVL1VR-Ls)	culsiB044
Csa1G163160	MELO3C004712.2	Melon (DHL92) v3.6.1	cumedB010
Csa1G163160	Cla97C01G011570	Watermelon (97103) v2	cuwmbB009
Csa1G163160	Bhi08G000048	Wax gourd	cuwgoB049
Csa1G163160	CSPI01G14710	Wild cucumber (PI 183967)	cpicuB000
Csa1G163160	Cucsa.199720	Cucumber (Gy14) v1	cgycuB305
Csa1G163160	CmoCh18G006650	Cucurbita moschata (Rifu)	cmocuB383
Csa1G163160	Cp4.1LG09g05620	Cucurbita pepo (Zucchini)	cpecuB020
Csa1G163160	CsGy1G014590	Cucumber (Gy14) v2	cgybcuB001
Csa1G163160	Carg26273	Silver-seed gourd	carcuB0000

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa1G163160	Melon (DHL92) v3.6.1	cumedB078
Csa1G163160	Silver-seed gourd	carcuB0931
Csa1G163160	Watermelon (97103) v2	cuwmbB026
Csa1G163160	Cucurbita maxima (Rimu)	cmacuB203
Csa1G163160	Cucurbita maxima (Rimu)	cmacuB399
Csa1G163160	Cucurbita maxima (Rimu)	cmacuB579
Csa1G163160	Cucurbita moschata (Rifu)	cmocuB569
Csa1G163160	Watermelon (Charleston Gray)	cuwcgB028
Csa1G163160	Watermelon (97103) v1	cuwmB042
Csa1G163160	Watermelon (97103) v1	cuwmB057
Csa1G163160	Watermelon (97103) v1	cuwmB065
Csa1G163160	Cucurbita pepo (Zucchini)	cpecuB848
Csa1G163160	Bottle gourd (USVL1VR-Ls)	culsiB005
Csa1G163160	Bottle gourd (USVL1VR-Ls)	culsiB021