Bhi01G000888 (gene) Wax gourd

Overview
NameBhi01G000888
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr1 : 24602185 .. 24602821 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAACCACCAATGCCTTCTAATTCCACACAATCCTTTGTGAGCTTTCTACATTCACAAACTAATGGCTTCAACAACAGCTTTCGTTGCTTGGAAGAAGGTTATCTTCTTTGCTTTGCTTCTTCATGCTTTCAACGTGGTTTCGGCGAGAGAACTTGTCGCTCTCACAGCCGGTAAGTCTTCTCTTTTCATAATACCATTCTAACAATATTGTTTTAAATTGACTATAACCGAAGTATTGGCTTAAGCTTTTGAGTTGTTTGGTGACTTAACTTTTTTCTGAAATCCTTTTACACTTTTCGTTTTTGGATTAATAGGTGAGTCGTCGTTGGCGATGGAGATGCATGGATTGATAGGTAGGAGATTAATTGTTCGACAGTTGGATATCTCTTGGAGAGGAAATTATTCTCCGCCTCCTCCTCGTCCTCGTCCACCTCCATCCTCTTCCTAAGGGCAAGGTCTCGAACATGGATGTTTTTATTTTTAATTACCCTTCCTTGGCCTTTGTTTTGGGTTTGGATTAATAAGGATCTCCACAAGTTGTATGAAGTTCTTTAAAGTTGTGGCTTTTTATAGCGTTGTATGTGATTTTGGTGGAGTTAACTACAACTACAAATACGTTTTTATATTTGAAATTCAG

mRNA sequence

CAACCACCAATGCCTTCTAATTCCACACAATCCTTTGTGAGCTTTCTACATTCACAAACTAATGGCTTCAACAACAGCTTTCGTTGCTTGGAAGAAGGTTATCTTCTTTGCTTTGCTTCTTCATGCTTTCAACGTGGTTTCGGCGAGAGAACTTGTCGCTCTCACAGCCGGTGAGTCGTCGTTGGCGATGGAGATGCATGGATTGATAGGTAGGAGATTAATTGTTCGACAGTTGGATATCTCTTGGAGAGGAAATTATTCTCCGCCTCCTCCTCGTCCTCGTCCACCTCCATCCTCTTCCTAAGGGCAAGGTCTCGAACATGGATGTTTTTATTTTTAATTACCCTTCCTTGGCCTTTGTTTTGGGTTTGGATTAATAAGGATCTCCACAAGTTGTATGAAGTTCTTTAAAGTTGTGGCTTTTTATAGCGTTGTATGTGATTTTGGTGGAGTTAACTACAACTACAAATACGTTTTTATATTTGAAATTCAG

Coding sequence (CDS)

ATGGCTTCAACAACAGCTTTCGTTGCTTGGAAGAAGGTTATCTTCTTTGCTTTGCTTCTTCATGCTTTCAACGTGGTTTCGGCGAGAGAACTTGTCGCTCTCACAGCCGGTGAGTCGTCGTTGGCGATGGAGATGCATGGATTGATAGGTAGGAGATTAATTGTTCGACAGTTGGATATCTCTTGGAGAGGAAATTATTCTCCGCCTCCTCCTCGTCCTCGTCCACCTCCATCCTCTTCCTAA

Protein sequence

MASTTAFVAWKKVIFFALLLHAFNVVSARELVALTAGESSLAMEMHGLIGRRLIVRQLDISWRGNYSPPPPRPRPPPSSS
Homology
[Close]
BLAST of Bhi01G000888 vs. TrEMBL
Match: tr|A0A0A0L5K7|A0A0A0L5K7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G175610 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 2.8e-11
Identity = 45/67 (67.16%), Postives = 50/67 (74.63%), Query Frame = 0 

Query: 3  STTAFVAWKKV-IFFALLLHAFNVVSARELVALTAGESSLAMEMHGLIGRRLIVRQLDIS 62
          +T A VAWKKV IFF LLL A+N +SARELVA T  E SL  EM+ +I RRL VRQLD S
Sbjct: 4  ATIASVAWKKVIIFFTLLLLAYN-ISARELVARTTCEPSLTTEMNDVIDRRLFVRQLDTS 63

Query: 63 WRGNYSP 69
          WRGNY P
Sbjct: 64 WRGNYFP 69

[Close]
BLAST of Bhi01G000888 vs. NCBI nr
Match: KGN57260.1 (hypothetical protein Csa_3G175610 [Cucumis sativus])

HSP 1 Score: 76.6 bits (187), Expect = 4.2e-11
Identity = 45/67 (67.16%), Postives = 50/67 (74.63%), Query Frame = 0 

Query: 3  STTAFVAWKKV-IFFALLLHAFNVVSARELVALTAGESSLAMEMHGLIGRRLIVRQLDIS 62
          +T A VAWKKV IFF LLL A+N +SARELVA T  E SL  EM+ +I RRL VRQLD S
Sbjct: 4  ATIASVAWKKVIIFFTLLLLAYN-ISARELVARTTCEPSLTTEMNDVIDRRLFVRQLDTS 63

Query: 63 WRGNYSP 69
          WRGNY P
Sbjct: 64 WRGNYFP 69

The following BLAST results are available for this feature:
BLAST of Bhi01G000888 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi01G000888 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi01G000888 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L5K7|A0A0A0L5K7_CUCSA2.8e-1167.16Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G175610 PE=4 SV=1[more]
BLAST of Bhi01G000888 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN57260.14.2e-1167.16hypothetical protein Csa_3G175610 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi01M000888Bhi01M000888mRNA