Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTAGTGTTACTCCACTTCCGATTGCTTTCAATAACCCATATGTTCAAGCAATGGGAAGTTTTGCGGTGGGGGAGCATACATTCAAGCTGTTAGGGGTAGAAATGAGGTTCATTCGCGTGGTGAAATATGAGATTCTGAAGTTGGATAATGCAAGGTCAAAATACAACCTTCTTGTGGAGGTGGAAGAAAACGTAGTGGCTCCACCTTTTCAATCATCTAGAAAGGTATATGTGGCTGGTGTGATGCATAATGAAGATGAAAAATCTTGGACACTCTTATGTTTTGACTCTGTGGACCTGAAACCCTATTGTCCTATAAATTCCAATGCCTAG
mRNA sequence
ATGGCTAGTGTTACTCCACTTCCGATTGCTTTCAATAACCCATATGTTCAAGCAATGGGAAGTTTTGCGGTGGGGGAGCATACATTCAAGCTGTTAGGGGTAGAAATGAGGTTCATTCGCGTGGTGAAATATGAGATTCTGAAGTTGGATAATGCAAGGTCAAAATACAACCTTCTTGTGGAGGTGGAAGAAAACGTAGTGGCTCCACCTTTTCAATCATCTAGAAAGGTATATGTGGCTGGTGTGATGCATAATGAAGATGAAAAATCTTGGACACTCTTATGTTTTGACTCTGTGGACCTGAAACCCTATTGTCCTATAAATTCCAATGCCTAG
Coding sequence (CDS)
ATGGCTAGTGTTACTCCACTTCCGATTGCTTTCAATAACCCATATGTTCAAGCAATGGGAAGTTTTGCGGTGGGGGAGCATACATTCAAGCTGTTAGGGGTAGAAATGAGGTTCATTCGCGTGGTGAAATATGAGATTCTGAAGTTGGATAATGCAAGGTCAAAATACAACCTTCTTGTGGAGGTGGAAGAAAACGTAGTGGCTCCACCTTTTCAATCATCTAGAAAGGTATATGTGGCTGGTGTGATGCATAATGAAGATGAAAAATCTTGGACACTCTTATGTTTTGACTCTGTGGACCTGAAACCCTATTGTCCTATAAATTCCAATGCCTAG
Protein sequence
MASVTPLPIAFNNPYVQAMGSFAVGEHTFKLLGVEMRFIRVVKYEILKLDNARSKYNLLVEVEENVVAPPFQSSRKVYVAGVMHNEDEKSWTLLCFDSVDLKPYCPINSNA
Homology
BLAST of Spg012263.1 vs. NCBI nr
Match:
KGN53820.1 (hypothetical protein Csa_014847 [Cucumis sativus])
HSP 1 Score: 79.7 bits (195), Expect = 1.7e-11
Identity = 39/87 (44.83%), Postives = 56/87 (64.37%), Query Frame = 0
Query: 13 NPYVQAMGSFAVGEHTFKLLGVEMRFIRVVKYEILKLDNARSKYNLLVEVEENVVAPPFQ 72
N Y+QAMG FAV EHT + G+E +FI V + + KY+LLV+V+E ++AP F
Sbjct: 26 NEYLQAMGKFAVEEHTHNMSGIERKFISVGFAVVCSVPVGGDKYHLLVKVDEFILAPSFP 85
Query: 73 SSRKVYVAGVMHNEDEKSWTLLCFDSV 100
K+Y+A V+HN+ SW LL F++V
Sbjct: 86 KYEKLYMATVLHNKVNHSWALLRFENV 112
BLAST of Spg012263.1 vs. NCBI nr
Match:
XP_023543511.1 (cysteine proteinase inhibitor 5-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 74.3 bits (181), Expect = 7.3e-10
Identity = 44/98 (44.90%), Postives = 59/98 (60.20%), Query Frame = 0
Query: 8 PIAFNNPYVQAMGSFAVGEHTFKLLGVEMRFIRVVKYEILKLDNARSKYNLLVEVEENVV 67
P+ ++PYVQ +G FAV EH L GV M F+RVV E K+ KY+L+VEV+E +V
Sbjct: 25 PVNVHDPYVQELGRFAVMEHVHGLCGVGMTFVRVVSGE-SKMVCEGKKYSLVVEVKEVLV 84
Query: 68 APPFQSSRKVYVAGVMHNEDEKSWTLLCFDSVDLKPYC 106
P + K+YVA V+ + KSW LL F KP+C
Sbjct: 85 LPHQCPAIKLYVAEVLDKQCAKSWELLAF-----KPFC 116
BLAST of Spg012263.1 vs. NCBI nr
Match:
KAE8649343.1 (hypothetical protein Csa_014384 [Cucumis sativus])
HSP 1 Score: 72.4 bits (176), Expect = 2.8e-09
Identity = 38/96 (39.58%), Postives = 53/96 (55.21%), Query Frame = 0
Query: 13 NPYVQAMGSFAVGEHTFKLLGVEMRFIRVVKYEILKLDNARSKYNLLVEVEENVVAPPFQ 72
N Y+QAMG FAV E+T G++ +FI V + + KY+LLV+V+E ++AP
Sbjct: 25 NSYLQAMGRFAVEEYTHYNKGIKRKFISVGFAVVCSVSVGEEKYHLLVKVDEFILAPSVP 84
Query: 73 SSRKVYVAGVMHNEDEKSWTLLCFDSVDLKPYCPIN 109
KVYVA V+H + SW LL F+ P N
Sbjct: 85 KFEKVYVATVLHKKVNHSWALLRFEDAAASTVSPTN 120
BLAST of Spg012263.1 vs. NCBI nr
Match:
WP_198843152.1 (hypothetical protein, partial [Aureibaculum sp. A20] >MBJ2176574.1 hypothetical protein [Aureibaculum sp. A20])
HSP 1 Score: 68.9 bits (167), Expect = 3.1e-08
Identity = 40/89 (44.94%), Postives = 56/89 (62.92%), Query Frame = 0
Query: 12 NNPYVQAMGSFAVGEHTFKLLGVEMRFIRVVKYEILKLDNARSKYNLLVEVEENVV-APP 71
++PYVQ MG F+V EHT KL+G M+FIRVV E + + +Y L+VEV E+++ PP
Sbjct: 35 HDPYVQEMGRFSVMEHTHKLVGASMKFIRVVSGETRPMSEGK-EYRLVVEVAEHIITCPP 94
Query: 72 FQS-SRKVYVAGVMHNEDEKSWTLLCFDS 99
S S K Y+A V+ ++SW L F S
Sbjct: 95 MLSVSVKFYLATVLEKPLDRSWQLEAFVS 122
BLAST of Spg012263.1 vs. NCBI nr
Match:
XP_022132557.1 (cysteine proteinase inhibitor 6-like [Momordica charantia])
HSP 1 Score: 68.6 bits (166), Expect = 4.0e-08
Identity = 38/85 (44.71%), Postives = 49/85 (57.65%), Query Frame = 0
Query: 12 NNPYVQAMGSFAVGEHTFKLLGVEMRFIRVVKYEILKLDNARSKYNLLVEVEENVVAPPF 71
N+PYVQ +G FAV EHT L G FIRVV E + KY L++EV+E ++ P
Sbjct: 32 NDPYVQELGRFAVMEHTHNLCGASYEFIRVVSGESQVVGG--KKYCLVIEVKETIIIPSM 91
Query: 72 QSSRKVYVAGVMHNEDEKSWTLLCF 97
SS K + A ++ EKSW LL F
Sbjct: 92 PSSIKFFKAIMLDKAWEKSWALLSF 114
BLAST of Spg012263.1 vs. ExPASy TrEMBL
Match:
A0A0A0KW14 (Acetate kinase OS=Cucumis sativus OX=3659 GN=Csa_4G151760 PE=4 SV=1)
HSP 1 Score: 79.7 bits (195), Expect = 8.4e-12
Identity = 39/87 (44.83%), Postives = 56/87 (64.37%), Query Frame = 0
Query: 13 NPYVQAMGSFAVGEHTFKLLGVEMRFIRVVKYEILKLDNARSKYNLLVEVEENVVAPPFQ 72
N Y+QAMG FAV EHT + G+E +FI V + + KY+LLV+V+E ++AP F
Sbjct: 26 NEYLQAMGKFAVEEHTHNMSGIERKFISVGFAVVCSVPVGGDKYHLLVKVDEFILAPSFP 85
Query: 73 SSRKVYVAGVMHNEDEKSWTLLCFDSV 100
K+Y+A V+HN+ SW LL F++V
Sbjct: 86 KYEKLYMATVLHNKVNHSWALLRFENV 112
BLAST of Spg012263.1 vs. ExPASy TrEMBL
Match:
A0A6J1BU61 (cysteine proteinase inhibitor 6-like OS=Momordica charantia OX=3673 GN=LOC111005388 PE=4 SV=1)
HSP 1 Score: 68.6 bits (166), Expect = 1.9e-08
Identity = 38/85 (44.71%), Postives = 49/85 (57.65%), Query Frame = 0
Query: 12 NNPYVQAMGSFAVGEHTFKLLGVEMRFIRVVKYEILKLDNARSKYNLLVEVEENVVAPPF 71
N+PYVQ +G FAV EHT L G FIRVV E + KY L++EV+E ++ P
Sbjct: 32 NDPYVQELGRFAVMEHTHNLCGASYEFIRVVSGESQVVGG--KKYCLVIEVKETIIIPSM 91
Query: 72 QSSRKVYVAGVMHNEDEKSWTLLCF 97
SS K + A ++ EKSW LL F
Sbjct: 92 PSSIKFFKAIMLDKAWEKSWALLSF 114
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KGN53820.1 | 1.7e-11 | 44.83 | hypothetical protein Csa_014847 [Cucumis sativus] | [more] |
| XP_023543511.1 | 7.3e-10 | 44.90 | cysteine proteinase inhibitor 5-like [Cucurbita pepo subsp. pepo] | [more] |
| KAE8649343.1 | 2.8e-09 | 39.58 | hypothetical protein Csa_014384 [Cucumis sativus] | [more] |
| WP_198843152.1 | 3.1e-08 | 44.94 | hypothetical protein, partial [Aureibaculum sp. A20] >MBJ2176574.1 hypothetical ... | [more] |
| XP_022132557.1 | 4.0e-08 | 44.71 | cysteine proteinase inhibitor 6-like [Momordica charantia] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0KW14 | 8.4e-12 | 44.83 | Acetate kinase OS=Cucumis sativus OX=3659 GN=Csa_4G151760 PE=4 SV=1 | [more] |
| A0A6J1BU61 | 1.9e-08 | 44.71 | cysteine proteinase inhibitor 6-like OS=Momordica charantia OX=3673 GN=LOC111005... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Type |
|---|
| Spg012263 | Spg012263 | gene |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Spg012263.1-cds | Spg012263.1-cds-scaffold1:10988325..10988660 | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Spg012263.1 | Spg012263.1-protein | polypeptide |
