Spg012263 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg012263
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptioncysteine proteinase inhibitor 6-like
Locationscaffold1: 10988325 .. 10988660 (+)
RNA-Seq ExpressionSpg012263
SyntenySpg012263
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTAGTGTTACTCCACTTCCGATTGCTTTCAATAACCCATATGTTCAAGCAATGGGAAGTTTTGCGGTGGGGGAGCATACATTCAAGCTGTTAGGGGTAGAAATGAGGTTCATTCGCGTGGTGAAATATGAGATTCTGAAGTTGGATAATGCAAGGTCAAAATACAACCTTCTTGTGGAGGTGGAAGAAAACGTAGTGGCTCCACCTTTTCAATCATCTAGAAAGGTATATGTGGCTGGTGTGATGCATAATGAAGATGAAAAATCTTGGACACTCTTATGTTTTGACTCTGTGGACCTGAAACCCTATTGTCCTATAAATTCCAATGCCTAG

mRNA sequence

ATGGCTAGTGTTACTCCACTTCCGATTGCTTTCAATAACCCATATGTTCAAGCAATGGGAAGTTTTGCGGTGGGGGAGCATACATTCAAGCTGTTAGGGGTAGAAATGAGGTTCATTCGCGTGGTGAAATATGAGATTCTGAAGTTGGATAATGCAAGGTCAAAATACAACCTTCTTGTGGAGGTGGAAGAAAACGTAGTGGCTCCACCTTTTCAATCATCTAGAAAGGTATATGTGGCTGGTGTGATGCATAATGAAGATGAAAAATCTTGGACACTCTTATGTTTTGACTCTGTGGACCTGAAACCCTATTGTCCTATAAATTCCAATGCCTAG

Coding sequence (CDS)

ATGGCTAGTGTTACTCCACTTCCGATTGCTTTCAATAACCCATATGTTCAAGCAATGGGAAGTTTTGCGGTGGGGGAGCATACATTCAAGCTGTTAGGGGTAGAAATGAGGTTCATTCGCGTGGTGAAATATGAGATTCTGAAGTTGGATAATGCAAGGTCAAAATACAACCTTCTTGTGGAGGTGGAAGAAAACGTAGTGGCTCCACCTTTTCAATCATCTAGAAAGGTATATGTGGCTGGTGTGATGCATAATGAAGATGAAAAATCTTGGACACTCTTATGTTTTGACTCTGTGGACCTGAAACCCTATTGTCCTATAAATTCCAATGCCTAG

Protein sequence

MASVTPLPIAFNNPYVQAMGSFAVGEHTFKLLGVEMRFIRVVKYEILKLDNARSKYNLLVEVEENVVAPPFQSSRKVYVAGVMHNEDEKSWTLLCFDSVDLKPYCPINSNA
Homology
BLAST of Spg012263 vs. NCBI nr
Match: KGN53820.1 (hypothetical protein Csa_014847 [Cucumis sativus])

HSP 1 Score: 79.7 bits (195), Expect = 1.7e-11
Identity = 39/87 (44.83%), Postives = 56/87 (64.37%), Query Frame = 0

Query: 13  NPYVQAMGSFAVGEHTFKLLGVEMRFIRVVKYEILKLDNARSKYNLLVEVEENVVAPPFQ 72
           N Y+QAMG FAV EHT  + G+E +FI V    +  +     KY+LLV+V+E ++AP F 
Sbjct: 26  NEYLQAMGKFAVEEHTHNMSGIERKFISVGFAVVCSVPVGGDKYHLLVKVDEFILAPSFP 85

Query: 73  SSRKVYVAGVMHNEDEKSWTLLCFDSV 100
              K+Y+A V+HN+   SW LL F++V
Sbjct: 86  KYEKLYMATVLHNKVNHSWALLRFENV 112

BLAST of Spg012263 vs. NCBI nr
Match: XP_023543511.1 (cysteine proteinase inhibitor 5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 74.3 bits (181), Expect = 7.3e-10
Identity = 44/98 (44.90%), Postives = 59/98 (60.20%), Query Frame = 0

Query: 8   PIAFNNPYVQAMGSFAVGEHTFKLLGVEMRFIRVVKYEILKLDNARSKYNLLVEVEENVV 67
           P+  ++PYVQ +G FAV EH   L GV M F+RVV  E  K+     KY+L+VEV+E +V
Sbjct: 25  PVNVHDPYVQELGRFAVMEHVHGLCGVGMTFVRVVSGE-SKMVCEGKKYSLVVEVKEVLV 84

Query: 68  APPFQSSRKVYVAGVMHNEDEKSWTLLCFDSVDLKPYC 106
            P    + K+YVA V+  +  KSW LL F     KP+C
Sbjct: 85  LPHQCPAIKLYVAEVLDKQCAKSWELLAF-----KPFC 116

BLAST of Spg012263 vs. NCBI nr
Match: KAE8649343.1 (hypothetical protein Csa_014384 [Cucumis sativus])

HSP 1 Score: 72.4 bits (176), Expect = 2.8e-09
Identity = 38/96 (39.58%), Postives = 53/96 (55.21%), Query Frame = 0

Query: 13  NPYVQAMGSFAVGEHTFKLLGVEMRFIRVVKYEILKLDNARSKYNLLVEVEENVVAPPFQ 72
           N Y+QAMG FAV E+T    G++ +FI V    +  +     KY+LLV+V+E ++AP   
Sbjct: 25  NSYLQAMGRFAVEEYTHYNKGIKRKFISVGFAVVCSVSVGEEKYHLLVKVDEFILAPSVP 84

Query: 73  SSRKVYVAGVMHNEDEKSWTLLCFDSVDLKPYCPIN 109
              KVYVA V+H +   SW LL F+        P N
Sbjct: 85  KFEKVYVATVLHKKVNHSWALLRFEDAAASTVSPTN 120

BLAST of Spg012263 vs. NCBI nr
Match: WP_198843152.1 (hypothetical protein, partial [Aureibaculum sp. A20] >MBJ2176574.1 hypothetical protein [Aureibaculum sp. A20])

HSP 1 Score: 68.9 bits (167), Expect = 3.1e-08
Identity = 40/89 (44.94%), Postives = 56/89 (62.92%), Query Frame = 0

Query: 12  NNPYVQAMGSFAVGEHTFKLLGVEMRFIRVVKYEILKLDNARSKYNLLVEVEENVV-APP 71
           ++PYVQ MG F+V EHT KL+G  M+FIRVV  E   +   + +Y L+VEV E+++  PP
Sbjct: 35  HDPYVQEMGRFSVMEHTHKLVGASMKFIRVVSGETRPMSEGK-EYRLVVEVAEHIITCPP 94

Query: 72  FQS-SRKVYVAGVMHNEDEKSWTLLCFDS 99
             S S K Y+A V+    ++SW L  F S
Sbjct: 95  MLSVSVKFYLATVLEKPLDRSWQLEAFVS 122

BLAST of Spg012263 vs. NCBI nr
Match: XP_022132557.1 (cysteine proteinase inhibitor 6-like [Momordica charantia])

HSP 1 Score: 68.6 bits (166), Expect = 4.0e-08
Identity = 38/85 (44.71%), Postives = 49/85 (57.65%), Query Frame = 0

Query: 12  NNPYVQAMGSFAVGEHTFKLLGVEMRFIRVVKYEILKLDNARSKYNLLVEVEENVVAPPF 71
           N+PYVQ +G FAV EHT  L G    FIRVV  E   +     KY L++EV+E ++ P  
Sbjct: 32  NDPYVQELGRFAVMEHTHNLCGASYEFIRVVSGESQVVGG--KKYCLVIEVKETIIIPSM 91

Query: 72  QSSRKVYVAGVMHNEDEKSWTLLCF 97
            SS K + A ++    EKSW LL F
Sbjct: 92  PSSIKFFKAIMLDKAWEKSWALLSF 114

BLAST of Spg012263 vs. ExPASy TrEMBL
Match: A0A0A0KW14 (Acetate kinase OS=Cucumis sativus OX=3659 GN=Csa_4G151760 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 8.4e-12
Identity = 39/87 (44.83%), Postives = 56/87 (64.37%), Query Frame = 0

Query: 13  NPYVQAMGSFAVGEHTFKLLGVEMRFIRVVKYEILKLDNARSKYNLLVEVEENVVAPPFQ 72
           N Y+QAMG FAV EHT  + G+E +FI V    +  +     KY+LLV+V+E ++AP F 
Sbjct: 26  NEYLQAMGKFAVEEHTHNMSGIERKFISVGFAVVCSVPVGGDKYHLLVKVDEFILAPSFP 85

Query: 73  SSRKVYVAGVMHNEDEKSWTLLCFDSV 100
              K+Y+A V+HN+   SW LL F++V
Sbjct: 86  KYEKLYMATVLHNKVNHSWALLRFENV 112

BLAST of Spg012263 vs. ExPASy TrEMBL
Match: A0A6J1BU61 (cysteine proteinase inhibitor 6-like OS=Momordica charantia OX=3673 GN=LOC111005388 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.9e-08
Identity = 38/85 (44.71%), Postives = 49/85 (57.65%), Query Frame = 0

Query: 12  NNPYVQAMGSFAVGEHTFKLLGVEMRFIRVVKYEILKLDNARSKYNLLVEVEENVVAPPF 71
           N+PYVQ +G FAV EHT  L G    FIRVV  E   +     KY L++EV+E ++ P  
Sbjct: 32  NDPYVQELGRFAVMEHTHNLCGASYEFIRVVSGESQVVGG--KKYCLVIEVKETIIIPSM 91

Query: 72  QSSRKVYVAGVMHNEDEKSWTLLCF 97
            SS K + A ++    EKSW LL F
Sbjct: 92  PSSIKFFKAIMLDKAWEKSWALLSF 114

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN53820.11.7e-1144.83hypothetical protein Csa_014847 [Cucumis sativus][more]
XP_023543511.17.3e-1044.90cysteine proteinase inhibitor 5-like [Cucurbita pepo subsp. pepo][more]
KAE8649343.12.8e-0939.58hypothetical protein Csa_014384 [Cucumis sativus][more]
WP_198843152.13.1e-0844.94hypothetical protein, partial [Aureibaculum sp. A20] >MBJ2176574.1 hypothetical ... [more]
XP_022132557.14.0e-0844.71cysteine proteinase inhibitor 6-like [Momordica charantia][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KW148.4e-1244.83Acetate kinase OS=Cucumis sativus OX=3659 GN=Csa_4G151760 PE=4 SV=1[more]
A0A6J1BU611.9e-0844.71cysteine proteinase inhibitor 6-like OS=Momordica charantia OX=3673 GN=LOC111005... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.450.10coord: 3..99
e-value: 8.3E-9
score: 37.5
NoneNo IPR availableSUPERFAMILY54403Cystatin/monellincoord: 12..99

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg012263.1Spg012263.1mRNA