Cucsat.G14323 (gene) Cucumber (B10) v3

Overview
NameCucsat.G14323
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Descriptionpolyadenylate-binding protein RBP45-like
Locationctg1869: 5915191 .. 5926025 (-)
RNA-Seq ExpressionCucsat.G14323
SyntenyCucsat.G14323
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AATCTAATCGATTCCTACCGATCCCATTCCTTTTGCTTTCCTCCCTTTTCGCCTCCTTCTCGGCTTCTAGGGTTAGGGTTTCTCTCTTTGTCCGAACGACACACCCACCACTCTCTTTTTCTTTCTCCGTCTCCCCATCCTAAGGAGATTTGTTTTTCTTTTCTCCCCTTCTCCATAACGATGCAGCCTGCTCCTGGTGTTGCTCCTCACAACATTCCTCACCAGGCTCCTCAGTACCAACAACAGCAACCTCCTTACATGATGATGCAGCCTCAGCCCCCGCAAGCACAGCCTGTTCCTCAGATGTGGCCTCAACAGCCGCAGGCTGGTTCTCCACAGGGCCAACCCCCTCAACCTGCCAACGGGGATGAGGTTCGTACGCTCTGGATCGGAGACTTGCAGTACTGGATGGACGAGAACTATATCTTTAATTGTTTTGCTCATACTGGCGAGGTACGTCAGTCAACGCCACCCATTTTTAGATCTTTTGTGTATATGTCTTTATTATTTGTTTTCATTGCTGTTGTTGGGAAAAGATTTGGTTTTATAATTATTAGGTTGAGTTCTTGAAGATTTGTGCCCACACATGTTACTGCATTGTGATTTCGGTGGACAAGAATCGTTTCCATTTCTTCTTTCTTCTTTCTTGTTTATAATTGATGTTGTTTATATCTGCAGGTTTCCTCCGTGAAAGTGATTCGGAATAAGCAAACCGGCCAGTCCGAGGGTTACGGTTTTATTGAGTTTTTAACTCGTCCAGCTGCGGAAAGAGTACTTCAAACTTATAATGGCACCGCCATGCCCAATGGGGCACAAAATTTTAGATTGAACTGGGCATCAGCAGGGGAGAAGCGACAAGATGATTCTCCTGATTACACTATTTTTGTGGGAGATTTGGCTGGTGATGTTACTGATTATGTGCTACAAGAAACATTTAGGGCACGGTATAACTCAGTTAAGGGTGCTAAAGTTGTGATCGATAGGCTCACTGGACGTACTAAGGGTTACGGTTTCGTAAAGTTTGGGGATGAGTCTGAACAAATTCGGGCTATGACTGAGATGAACGGTGTTCACTGTTCATCCAGACCCATGCGAATCGGACCAGCAGCTAACAAGAACACTTCTGGCAGTCAGCAGTTTTCGAAAAGTAAATACGAACTCCCCCCCCCCGAAACTGGAAAATTTTAAATGAAAAACAAGGCATTGAATTTTGTTTGGAATATCTTCTCAGTCATTCATTCATCATATGGATGTGCCCATTTGTGCTTACTGATTAGTGTTTTTCGATTCATTTTGCTTTCAATATGGCAAGATGCAATGCAACTTCTATTTTCTGTCCTGATTTAGCTCCTCTCCGTTACTTCTATTTCTAGTTTCCAGCATTTTAATTCCCCTCTCGTATACCTTGGAAGAATAGCCTTTCATGCCTTTTCCTTCGTGTACTTCCAATTCGAGCTTTGGTCATTTTAAGTACTATAAAGAAGAATTAATAAACTTATAAAACTCCTCTTTTCTTTAAGCAGGGTGTCAAAAGGCTCTGTCAGCTTGGGGTCCGCTACTGATTTCAGCTGACACGCTTACCCTTTAATACGTTGTTCCATTTAGGTCAGTTTTTTTTCCGCCAATGTCTTACCTCTTTCTTTTTATGTGGCATATTTATGCTGCGGTTTTTAATTCACCTTTAGTTCTGCAACGTTTAGTTTTTCCTTTGATTTGCATGGGTATTTTTTTCTCTCCCTGGCATTTTACCACTTCTAATTCCTTTATTTTTCTTTAAAGTTTAGGTCACTTGTCTTAGGTTCTTTAGCTAGATGGTTTTTTTAAATTTCCAGCAACTGGGAATTTGGAGTAACATAGTTTGGTTCTGAACTTTCCTTCTACAACTGCAGTAGGTCATATAGGTTGAGCTTGTCCTTCACCTCCTAATATTTTGGGTTTATGGGATTTACTCTATGTTTTATTTTCAATATTTGATGGTTGGATTCCCTTTTTGTAGACAAATCATCTATCAACAAAAGGTTTTGATACATTTCTTGATCTGCCTGAATTTTCATTTCTTACTAGCTTTTCATTCTGTAGCTCTGTATTTCGTTAAGTCTTTCCTTTGGAATATTCTATTCTTCTTCCATCGCGGTGGGTCTATTTTCATCCAAGTATGCTCTGTATGTATCTTTCTTGTAGTTAGGATTGTATTGATTGGTTTTGTTGATTTAAAGGCTTCTAGTTTTTTTTTTTTTAATGCTCATACCATTTCTTGGTGTGAATCATTTCATGTGATTGATTGGCTAAATAGTGGTGCGTGGCAGAATTTCCAATACGTCACATTATGGTTGCCTCAAGTCAGAAGTTGAAGAGGCTATATGTTTTATTTTAGTTCATTAGATCAGAATTTCTCGTGTATTATTATGTAGGCTTTTTCACAATTAATCTGGTCTCCATGATGAATCACTTGGTTATTTTGCATTTATTATGTTTGGCACAGTATCTTTTATTCTTCATATTCCGATCTCCATGTTATTGTTTTTGTATTGATATGAGCTGAAAGCCTTGAAGTTCTTCAAATCTTATGCCTTTTTGAAATTATAGGAGGCTTACATCTTTGAGGTGTAAAATAGGTAAACCTCAGTGAATGATAGAGAAGACAATAATCAAATATGGAAATTTTGAAGAGTTGGAATGTCGACATTATGGTGGCTTCTGTTTGATGGGAATTTTTAGGGGAGAATTAATTATCGATGTGGCACATTGTCTGCATTTTAAGACCATTTCAAGTTATCTTCATTTGAATAAAAAAAAAAATCAGGTCCCATAAGAGTTTAGTCCCCTCCCCCTCCGTAATATATATAATTATAATTATTTCCGTTGTTCGGTATTAGCTATTACAGCCAGGATGTGACTGTTATAATTCTGCATCTATTTAAAGAATGGATGTCTCTTTTCATGGATATTTTGATTGCTAGTCATTTGAATTTATCATGTTTTAGTTTGCATGTATCTTGGTTTTAATTTTCATTACTATTATTTACCATAACGATAATGCAACATGATAATGACTTGGGTAAAAATGATCTAAGGATTTTTTTAGTTCATGTTGATAGAAGATGTCATTTTAGTTTAATATTTTCAAATGCAGCTTCATACCAGAATCCTCCAGGCACACAGAATGAGAACGATCCAAATAATACAACTGTGGGTACTCCAATAATTTTCAATAGCAATATTATCTCATGGACGTATTTATGAGTTATTATTTGATTTTGTTTCAGATATTCGTGGGGAATTTGGATTCTAATGTCACTGATGAGCACTTGAGACAAGTATTCAGTCAGTATGGAGAGCTGGTGCATGTTAAGATTCCTGCAGGCAAACGATGTGGCTTTGTTCAATTTTCAGACAGGTTGGTATTTTCAAAAGCTTTCATGACACCTACGCCCCTTCTTCCCATCATGTGGTGTTCATTTGCTCATGAGTTTTGTATTTTGTTTTCCTTAATACTATTTTAGAAGCTGCGCCGAGGAAGCTTTGCGCATTTTGAATGGAACCCCAATTGGTGGGCAAAACATTAGACTTTCGTGGGGTCGTAGTCCTTCTAACAAACAGGTACTATTATTGTGCTTCACTTGTATTCTTGTATTCATTAAAGCAAATAATATATTAGCTTTATTGACCTCTATTTTAAATTTACAGCCTCAGGCTGATCCTAATCAATGGAATGGAGGAGGAGGTGGAGGAGGAGGATATTATGGATATGGACAAGGATATGAAAATTATAGCTATGCTCCAGCTGCCCAAGACCCTAACATGTTCTACAGTGGCTATGGTGGGTATGGGAACTACCAGCAACCAGCAACACAGCAGCCATCACAGCAACAAGGTGGATATATGTAGATGACAAGTTCTATTTCTCTTGCCTCACCTCTCAATTCGAATGAGACCCTAAACTTCTGCTTGTCATTTGTAGAAGATTTTGGAGATGTTACTCTCTCATCTATTCTAAACAAATATTCTGTATGACTCCGTTGACTTGATGTCAGTTGTGTGTTGTATTTGGCGTTAGAGGTTTTTGCGTGTTGTGTTATTTGTTTCTTTTCATATGATCATATCTATTATGGTAGGAGTTGAATGATCTTGTAATTTTCTCAAGTCCTTGTTAAAGGCTGTACGTGGGTTAACTACTTACTACTTATGTTCTTGCTGATGTTTCTCTACCCTATTTCACTTTTTCTGGCTTGAAACTGTTTGTTATGTTTTTTCATAGTATTACTGTACAATGGGAATTGTCGTCGAACCATTGAGACGTTTGGTTTCTGAAATTGTTCAACTTTTGCTTGTACAATATTGAAGGTGTATTCATTGTTTAATTAAAATCGGTTAGCCATTACTAGATTAATTCCAAATTTCTTAATCCTATTATGCGCCTTATGCAACAGTTCATTAATAGATTAATTCCAACTTGCTAGATTCAATTTTGTGCCTTATACGAGTTTATAAACACAAGTTCGCTTAAGTTTAAATTTCATCCTTAAATAAATACATAAATGGATTTGGACTAATGTTGCGAATTGAATTCTTTTCTGGACTAATGCCAAAGATACAATGTCTAAAATCTTCCAAAAGTGATCAGTCTTAATGAAAATGGAACTTTCATGTGAAGTATTGGCTCTTCATTCAAATCTCTTCACCTCCAAAGAGAGAAAATATATTTTCCAGACATTGTGGGAGATTGGAATAAGTTAGCTTATAATACTGAATTTAATAGGAAGACCTAATATTGGTGTGTGGTTGGTACTGTTTGGACTTCATGTGCTTGGTTTTGAATTAGTATTTGTGGCTTGAGTTGTGTTGTATGCTTATTCATTTATTGGGTTGTAGATTTCTTCAAACTAAATAATTTTAGTTAAAAATTCCAACAAAATTCAACCATGAAATATTTGACTTGACTCAATTCGAGTTACTCGAGCAAAAAGTAAAATTTAGTAGGTGGTTTTCTTATTTAATTATTTTTATATATTAAAATAAGACATGTTTTACTCATGTTCAACGAATAATGAATCAACGGTGATCTAAAAAGGATTCATGTGATTATGTTTAGTGTTGTTTAATTATGTTATAATACAAGGAGAGCACATGTCTAAATAAGTTGTCATCCTATTGATAAACACTAATGCTACCATTATCGTTTGTGATTATCATCATTGTCACTCTTTTATAGAAAAAACTATGGGTTAACACGAGATTTTGACCAAATAAATTTTATTTGTGAAAATGCAAATATTACAATATTTAATTTTTACCGTCTAGTATGTTCTCTTAAATATATAAAATTCAATTTTTAAGTTTGTTGATCTTCTTCTATTATGAGTCGTTGGACCTGTTGATCTTTTTTAGGATCAATCTTCAACTTGTAGATGGTGAAAAAACGATTAATTTGATGAAGTCTTCAAAATTTTCAGAATATCAGTCTTCAGTTTTTATATGATGAAAAGTCGATCAATTAGTCGAAGTTTTCAAACATTTGAAAAGTTCATTTTTCAATTTGTAGATGATGCATATACGACAAAGTTGTTGAAGAAAATAAGATATATTCATTTGAAGAATAGATGGTGAACTTGTTGAAAACGAATAAATGATTTGTTCGCTAGAGATGGTCAATCAAATATGAATATGACACATTCTCTTTCTTGAAGAATAGATTCACGATTTGTTGAAGAACAATTTGTGGAATTTTCTTAGATTAATGGATCTATGTCGAATGCCTCAAGTGAAGGATTAGCTACGGTCTATTGACTTGGATTTGGTTCAGTTTCGACCCATCTCTTATATTAAATAGTTAACATGATATAAAGTAATGTATTTGTTGAAGTTTATTAAGTCTAAATAGTAATTTATAACTAATAATTAAAAGTAACAATAATGATTAATGGATATTAACTTGTTAAGTAATCATACTTTCTTCTTTCTTCATTCTCCAGCCAAATCTCATAACAATAAACATATTTTTTGAAAGTTTTAAGAACCTTTTCTAAAACATTTAAAAGTTTATATACATTTTTCTGTGTAGTTTAGAAAAAAAAAAGTATTAAATAAAAAATATGACGATTTTATAGACCGAAAATAGTTTATCTACAAATACGAATGGAAAACCGTTTTCAAAAAATAGAATTCAAGTTTCCAAATATTTTAAAAAGCAGAGTTCAAAATTGAAAAGAAGAAATAGAAAACATAAAACAAAATGACAGATGTATTTAGAAATGTTTAACGATTTGTAGAGAAAAAAAGAAAAACATTTTATTTTCTTTGTTCTAAGTGAATCCAAATGTGAAAGGTTTGGTGAGTTTTTGGGATAAGTAAAAACGTACCAAACAAATTATTTTTATTTTATTTCCTTTTTTAAAACGATAAATGTAATCGATTCCCCCACTGGCCCCCTTCTCTTTGTTTCCTCCCTTTTCGCCCATTATCGGCTTCTAGGGTTAGGGTTTCTCTCTTTGTCCAGACGAGACACTCAAAACTCTCTTCTTCTTTCTCCTTCTTTCCTCACTAAGGAGATTCTCTTATCCCCTTTCTCCATTACCATGCAGCCTGCACCTGGTGTTGCCCCTCACAACATGCCTCACCAGGCCCCTCAGTACCAACAACAGCAACCTCCTTACATGATGATGCCCCCTCAGCCGCCCCAACCTCAGCCTGTTCCTCAGATGTGGCCTCAGCAGCCACAGGCCGGTTCCCCACAGGGCCAACCCCCTCAGTCTGCCAACGGGGATGAGGTTCGTACCCTCTGGATCGGAGACTTGCAGTACTGGATGGACGAGAACTATATCTTTAATTGTTTTGCTCATACTGGCGAGGTACGTCTAAGAACGCCACCCCACTTTAGATCTTGTGTGTGTGTGTCTTTATTATTTCTTTTTATCGTTGTTGTTGGGAAAAAAAAGATATAGTTTTGTGATTATTAGGTTGATTGCATAAAGATTTGTCTACACACATGTTGGTATATATGAAGCGGTTCCGAAATTTCGTTTTTTTTTTTGCTGTTGAGATTTAACATTGTTTGTCTCTCCAGGTTTCCTCTGTGAAAGTGATTCGGAACAAGCAAACCGGCCAGTCCGAGGGTTACGGTTTTATTGAGTTTTTAACTCGTCCAGCTGCAGAAAGAGTACTTCAAACTTATAATGGCACCGCCATGCCCAATGGGGCTCAAAATTTTAGATTGAACTGGGCATCAGCAGGGGAGAAGCGACAAGATGACTCTCCTGATTACACTATTTTTGTGGGAGATTTGGCTGGTGATGTTACTGATTATGTGCTACAAGAAACATTTAGGGCACGCTATAACTCAGTTAAGGGCGCTAAAGTTGTGATTGATAGGCTCACTGGACGCACTAAGGGTTATGGATTTGTTAAGTTTGGGGACGAGTCTGAACAAATGCGAGCAATGACTGAGATGAACGGTGTTCACTGTTCATCCAGACCCATGCGAATCGGACCAGCAGCTAACAAGAACACTTCTGGCGGTCAGCAGTTCTCGAAAAGTAAATACGAATTCCTCCCCAAACTGGAACATTTTAAATGAAAGACAGGGCATCAAATTTTGTATGGAATAGCTTGTCCATCATTCATTCATTGTATGGATGTGCCGTTTGTGTTTACTGATTTGTGTTTCTGGATGCATTTTGCTTTCTTATGGCCAGACGCAATTCTTATTTTCTGTCCTGATTTAGCTCCTCTCCGTTACTTTTATTACTAGTTTCTAGCATTTTAATTCCCCTCTCGTATACCTTGGAAGAATAGTAGCCTTTCATGCCTTTCCATCGTGTACTTCCAATTCGAGCTTTGGTCATTTTAAGTACTATAAAGAAGAATTAATAAACTTATAAAACTCCTCTTTTCTTTAAGCAGGGTGTCAAAAGGCTCTGTCAGCTTGGGGTCCGCTACTGATTTCAGCTGACATGCTTACCCTTTAGTACGTTGTTCCATTTAGGTCAGTTTTTTTCCCGCCAATGTCTTACCTCTTTTTTTTTATGTGGCATATTTATGCTACGGTTTTTAATTCACCTTTAGTTCTGCAACGTTTACCTTTTCCTATCATCTGCATGGGTATTTTTTTTGTCTCCCTGGTATTTCAGTCTTAATTCCGTTGGAAGTTTTTATTTTTTCTTTATTAAGTTTAGGGTACGCAGGTTCTTTAGCCAGTTTCATTATTGAAATTTCAGTATGTCTTGCGGCTATTGCTGGCCACTTAGGGTTGTGCTTGTCCTTCTCCTCCTGGCATTTAGGGTTATATGGTTTTACCTTCCTATTGTTTCATTTCAGTATTTGATGATTGGATCTCATTTATGTGTCCAACCCATTACCTGCAAAAGAATTTTGGTCAGCACAAAGTCATGTTTCTTAGTGTTATTAGGGTTCTTAGGAGTCTTATTTCTTACTAGTTTTTTGTTGTGTATCTTGGTATTCATTTTGTCATTCCTTTAGAATATTTCGTTCATCTTCTAAAGTTTTGAATTGGACATAGATATGTTCGGGTATACTTTCTTTGTTCTTTTAAGTAGGATCCTATTAATTGTTTTATTCTGTTCCGTTGTGTGAATCACTTTTATGTGAATGGTTGTGCAAGTTAGGTGCGGTGGATTCTGAGAATGGCATAATATGGTTGTTTGAGTCTGAAGTTAGGTACTCTAGTTGTGATATCTAGTTTTTTATGATGAAAAGCTTTATTATGTCAATTTCTTTTTTAATAATGTGTTTCTCTATGTTTTTCAAATTTACATTCTATGTTGAAATGAGCATGTTTATTTTCTTTTTTTATATTTTGGCCGTATGGTGATCATCATTAGATAATTATGATTGTGCCTTTATGGATTGTCAAAACTTCTATTTGAAATATTGTCTAGTTTTATATTTCTTAGGGCACACGTTGAAATTGGTACTTGTCTTCTAGTTATGCTATTTTGTAACAAATATCGCTCTAATGTATATTTTTCAAATTTCCCAATTTTGTTTGTGAAAATGGACTTCCTATGTACGTAATTTTCTGGATATCTTTTGTAGTTCTTGTTATTTTGGTATTCTTCGTGATTTCTCAATATGAGTACTTCTATGTTGCCCGTTATACCTACTGCCTCTGGTTTTTCCCCCTATAATGAAGCCGACTTTAGGTTGCATCGAACCATTTAAAACAGTGTGACTCTGTAATTCAAAATTTGCTTGTGTTTCAATTTTGTTGTTGGAGTCTTTTTTGAACATGCAACATATGGCATTGAGCCTAGTTCAACAGCCCTCTAAGCCAACCAGCTATGGAATTATTTGGTTGGAGGTTTGATTTGTTATAAGTGGAGCACACAGTGTTTATGCAGGTCTTGTGGATTCTATTTTTTATTTCTCAGTACACATTGCTTATTGCATTGATGTATATTATTTATGCAAGCTTGGACTGTAGCAGAATAATTGATATTGTGTGTTTAACAACTGCTGAACTGGTTGGTTCAAGTTAAAGAGCAAGTTCATTTAGGTTTGATTTTTTACTATTGCAGCTTCATATCAGAATCCTCAAGGGGCTCAGAATGAGAATGATCCAAACAATACGACTGTGGGTTCTTTACCTTATTTTTCCTTCGTCATGTAATTTTATTTGAGTTTTCTAACTTCTGAAATCCTATTGCAGATATTTGTGGGCAATTTGGATGCTAACGTGACAGACGAACACTTGCGACAAGTATTTGGTCAATATGGGGAATTGGTGCATGTAAAGATACCTGTAGGCAAACGATGTGGTTTCGTTCAATTTGCTGACAGGTTTGTATTTTGTTTCTTTTAAAAATATGAAACAGCTTGGTAGTTCTAACAAATGTAACCTAACATCTTAATCTCTCCTGAATTGGCTTGGACACATTTGATGGTTATTTCAATTTTGTTTTTAGGAACTGTGCTGAGGAAGCGCTACGTGTGTTGAATGGAACACAAATTGGTGGACAGAACATTAGACTCTCATGGGGACGTAGTCCTTCAAATAAACAGGTTGTGGTATTGTACTCTTTGTGTCCGTTGATGGTTATTGATTATAGTTCTTTCCGAATGTTCATTATTTTCTCATCTTTTTAGCCACAGGCGGACCCTAACCAATGGAATGGAGGTGGCTATTACGGATATGGACAAGGATACGAAAACTATAGCTATGCCCCAGCTCCTCAGGACCCTAATATGTTCTACAGTGGCTATGGTGGGTATGGAAATTACCAGCAGCCTCCCCCACAACAACCGCAGCAGCAGCAGCAAGGAGGATACATGTAGATTTGAAGTTTTGTTTACTCTGCCGTGGCCGCTCCCCTACCGAATCTCCCGGGGATATGATGGTTAAAGATTTTGGCAAAGTTATTTCACCCTCCCATTACATCCATTCTGAAGAACTCATCCTTTTCCTATTTTCTGTTCTACCTAAACTCTTTGATGACATGAGACATCTTTTCTTTTTTATTTATTATTATGTTATCCCGCAGAAGTTTTATTACGACTCTGTGTCGTTTATTTTCTATCACTACATTTTTGGTCTTTTGATGAGAGAGAATCTGGAGGCTTTTTGCCTTTGCTTATGAGTATTGCATTTTATACTGATTTAAACACTGACAAGTAATTCATCCCTAGCAAATTTATGGCCGCTGTGGGGTTGTGTTTTGTTTTTGTTTTTTCCGTTTCTGTTTTCTTCAGTACTTGTGAAAATTGTGCTACAACTATATTGTCCTATTTTATTGAATTGTATGGCTGTGGTATGAACACTTTTCCATGTGGGTCTTGACTTAGGATTACTACTTTTCAACCTTATTTAGTTTGTAAGATTT

Coding sequence (CDS)

AATCTAATCGATTCCTACCGATCCCATTCCTTTTGCTTTCCTCCCTTTTCGCCTCCTTCTCGGCTTCTAGGGTTAGGGTTTCTCTCTTTGTCCGAACGACACACCCACCACTCTCTTTTTCTTTCTCCGTCTCCCCATCCTAAGGAGATTTGTTTTTCTTTTCTCCCCTTCTCCATAACGATGCAGCCTGCTCCTGGTGTTGCTCCTCACAACATTCCTCACCAGGCTCCTCAGTACCAACAACAGCAACCTCCTTACATGATGATGCAGCCTCAGCCCCCGCAAGCACAGCCTGTTCCTCAGATGTGGCCTCAACAGCCGCAGGCCGGTTCCCCACAGGGCCAACCCCCTCAGTCTGCCAACGGGGATGAGGTTCGTACCCTCTGGATCGGAGACTTGCAGTACTGGATGGACGAGAACTATATCTTTAATTGTTTTGCTCATACTGGCGAGGTTTCCTCTGTGAAAGTGATTCGGAACAAGCAAACCGGCCAGTCCGAGGGTTACGGTTTTATTGAGTTTTTAACTCGTCCAGCTGCAGAAAGAGTACTTCAAACTTATAATGGCACCGCCATGCCCAATGGGGCTCAAAATTTTAGATTGAACTGGGCATCAGCAGGGGAGAAGCGACAAGATGACTCTCCTGATTACACTATTTTTGTGGGAGATTTGGCTGGTGATGTTACTGATTATGTGCTACAAGAAACATTTAGGGCACGCTATAACTCAGTTAAGGGCGCTAAAGTTGTGATTGATAGGCTCACTGGACGCACTAAGGGTTATGGATTTGTTAAGTTTGGGGACGAGTCTGAACAAATGCGAGCAATGACTGAGATGAACGGTGTTCACTGTTCATCCAGACCCATGCGAATCGGACCAGCAGCTAACAAGAACACTTCTGGCGGTCAGCAGTTCTCGAAAAGGTGTCAAAAGGCTCTGTCAGCTTGGGGTCCGCTACTGATTTCAGCTGACATGCTTACCCTTTAG

Protein sequence

NLIDSYRSHSFCFPPFSPPSRLLGLGFLSLSERHTHHSLFLSPSPHPKEICFSFLPFSITMQPAPGVAPHNIPHQAPQYQQQQPPYMMMQPQPPQAQPVPQMWPQQPQAGSPQGQPPQSANGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTSGGQQFSKRCQKALSAWGPLLISADMLTL
Homology
[Close]
BLAST of Cucsat.G14323 vs. ExPASy Swiss-Prot
Match: Q0J9Y2 (RNA-binding protein L OS=Oryza sativa subsp. japonica OX=39947 GN=RBP-L PE=1 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 4.1e-80
Identity = 165/253 (65.22%), Postives = 188/253 (74.31%), Query Frame = 0 

Query: 67  VAPHNIPHQAPQYQQQQPPYMMMQPQPPQAQPVPQMWPQQPQAGSPQGQP-PQSANGDEV 126
           + P   PHQ      QQPP M  QP PPQA    Q+ P QP   +P  Q  P  A  DEV
Sbjct: 32  IPPPMPPHQYGAPPPQQPPAMWGQP-PPQAH-YGQVPPPQPYYAAPPPQAMPAPAAADEV 91

Query: 127 RTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQ 186
           +TLWIGDLQ WMDE+YI+NCFA TGEV SVK+IR+KQ+GQ +GYGF+EF +R AA+R+LQ
Sbjct: 92  KTLWIGDLQPWMDESYIYNCFAATGEVQSVKLIRDKQSGQLQGYGFVEFTSRAAADRILQ 151

Query: 187 TYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYNSVK 246
           TYNG  MPN    FRLNWASAGEKR DD+PDYTIFVGDLA DVTDY+LQETFR  Y SVK
Sbjct: 152 TYNGQMMPNVEMVFRLNWASAGEKR-DDTPDYTIFVGDLAADVTDYLLQETFRVHYPSVK 211

Query: 247 GAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTSGGQQF 306
           GAKVV D++T R+KGYGFVKFGD +EQ RAMTEMNG+ CSSRPMRIGPAANK T+G Q+ 
Sbjct: 212 GAKVVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMLCSSRPMRIGPAANKKTTGVQER 271

Query: 307 SKRCQKALSAWGP 319
               Q A S   P
Sbjct: 272 VPNAQGAQSENDP 281

[Close]
BLAST of Cucsat.G14323 vs. ExPASy Swiss-Prot
Match: Q9LEB4 (Polyadenylate-binding protein RBP45 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP45 PE=1 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 1.6e-79
Identity = 167/266 (62.78%), Postives = 191/266 (71.80%), Query Frame = 0 

Query: 61  MQPAPGVAPHNIPHQAP------QYQQQQPP------YMM--MQPQPPQAQPVPQ-MWPQ 120
           M P  GVA    P  AP      QYQQQ PP      +MM   QPQ PQ QP  Q  W Q
Sbjct: 1   MMPQSGVAQ---PPMAPMSMDQHQYQQQAPPPTQQQQWMMPPQQPQQPQFQPQSQPAWAQ 60

Query: 121 QPQ------AGSPQGQPPQSANGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIR 180
           QP         +    P  + N +EVR+LWIGDLQYWMDENY+  CF HTGE+ S KVIR
Sbjct: 61  QPSQQQYGAMATTNPNPSPTGNPNEVRSLWIGDLQYWMDENYLSTCFYHTGELVSAKVIR 120

Query: 181 NKQTGQSEGYGFIEFLTRPAAERVLQTYNGTAMPNGAQNFRLNWASAGE-KRQDDSPDYT 240
           NKQTGQSEGYGF+EF +  AAE +LQTYNGT MPN  QNFR+NWAS G  +R+DDS ++T
Sbjct: 121 NKQTGQSEGYGFLEFRSHAAAETILQTYNGTLMPNVEQNFRMNWASLGAGERRDDSAEHT 180

Query: 241 IFVGDLAGDVTDYVLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTE 300
           IFVGDLA DVTDY+LQETF++ Y+SV+GAKVV DR+TGR+KGYGFVKF DESEQ+RAMTE
Sbjct: 181 IFVGDLAADVTDYILQETFKSVYSSVRGAKVVTDRITGRSKGYGFVKFADESEQLRAMTE 240

Query: 301 MNGVHCSSRPMRIGPAANKNTSGGQQ 305
           MNGV CS+RPMRIGPAANK   G  Q
Sbjct: 241 MNGVLCSTRPMRIGPAANKKPVGTPQ 263

[Close]
BLAST of Cucsat.G14323 vs. ExPASy Swiss-Prot
Match: Q9SAB3 (Polyadenylate-binding protein RBP45B OS=Arabidopsis thaliana OX=3702 GN=RBP45B PE=1 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 7.8e-79
Identity = 166/255 (65.10%), Postives = 189/255 (74.12%), Query Frame = 0 

Query: 62  QPAP-GVAPHNIPHQAPQYQQQQPPYMMMQPQPPQAQPVPQMWPQQPQAGSPQGQPPQSA 121
           QP P G+ PH+ P   P   QQQ  Y         A P PQMW   PQA +P    P +A
Sbjct: 4   QPPPGGILPHHAP---PPSAQQQYGYQQPYGIAGAAPPPPQMW--NPQAAAPPSVQPTTA 63

Query: 122 NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 181
             DE+RTLWIGDLQYWMDEN+++ CFAHTGE+ S KVIRNKQTGQ EGYGFIEF +  AA
Sbjct: 64  --DEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAAA 123

Query: 182 ERVLQTYNGTAMPN-GAQNFRLNWA--SAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETF 241
           ERVLQT+N   +P+   Q FRLNWA  S+G+KR DDSPDYTIFVGDLA DVTDY+L ETF
Sbjct: 124 ERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKR-DDSPDYTIFVGDLAADVTDYILLETF 183

Query: 242 RARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANK 301
           RA Y SVKGAKVVIDR+TGRTKGYGFV+F DESEQ+RAMTEMNGV CS+RPMRIGPAA+K
Sbjct: 184 RASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTRPMRIGPAASK 243

Query: 302 NTSGGQQFSKRCQKA 313
               GQ+ S +   A
Sbjct: 244 KGVTGQRDSYQSSAA 250

[Close]
BLAST of Cucsat.G14323 vs. ExPASy Swiss-Prot
Match: Q93W34 (Polyadenylate-binding protein RBP45C OS=Arabidopsis thaliana OX=3702 GN=RBP45C PE=2 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 7.8e-71
Identity = 149/251 (59.36%), Postives = 172/251 (68.53%), Query Frame = 0 

Query: 62  QPAP-----GVAPHNIPHQAPQYQQQQPPYMMMQPQPPQAQPVPQMWPQQ--PQAGSPQ- 121
           QP P        P  IP     Y QQQ  +MM   Q  Q QP P  W QQ  P +G PQ 
Sbjct: 4   QPPPASNGAATGPGQIPSDQQAYLQQQQSWMMQHQQQQQGQP-PAGWNQQSAPSSGQPQQ 63

Query: 122 -----GQPPQSANGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEG 181
                G      +  E+R+LWIGDLQ WMDENY+ N F  TGE ++ KVIRNKQ G SEG
Sbjct: 64  QQYGGGGSQNPGSAGEIRSLWIGDLQPWMDENYLMNVFGLTGEATAAKVIRNKQNGYSEG 123

Query: 182 YGFIEFLTRPAAERVLQTYNGTAMPNGAQNFRLNWA--SAGEKRQDDSPDYTIFVGDLAG 241
           YGFIEF+    AER LQTYNG  MP+  Q FRLNWA   AGE+RQ + P++T+FVGDLA 
Sbjct: 124 YGFIEFVNHATAERNLQTYNGAPMPSSEQAFRLNWAQLGAGERRQAEGPEHTVFVGDLAP 183

Query: 242 DVTDYVLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSS 298
           DVTD++L ETF+A Y+SVKGAKVV DR TGR+KGYGFV+F DESEQ+RAMTEMNG +CSS
Sbjct: 184 DVTDHMLTETFKAVYSSVKGAKVVNDRTTGRSKGYGFVRFADESEQIRAMTEMNGQYCSS 243

[Close]
BLAST of Cucsat.G14323 vs. ExPASy Swiss-Prot
Match: Q9FPJ8 (Polyadenylate-binding protein RBP45A OS=Arabidopsis thaliana OX=3702 GN=RBP45A PE=2 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 2.1e-68
Identity = 142/220 (64.55%), Postives = 165/220 (75.00%), Query Frame = 0 

Query: 82  QQPPYMMMQPQPPQAQPVPQMWPQQPQAGSPQGQPPQSANGDEVRTLWIGDLQYWMDENY 141
           QQ  +MMMQ Q  Q Q      P          Q P SA+  +V++LWIGDLQ WMDENY
Sbjct: 18  QQHLWMMMQQQQQQQQMQLSAAPLGQHQYGIGSQNPGSAS--DVKSLWIGDLQQWMDENY 77

Query: 142 IFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQTYNGTAMPNGAQNFRL 201
           I + FA +GE +S KVIRNK TGQSEGYGFIEF++   AERVLQTYNG  MP+  Q FRL
Sbjct: 78  IMSVFAQSGEATSAKVIRNKLTGQSEGYGFIEFVSHSVAERVLQTYNGAPMPSTEQTFRL 137

Query: 202 NW--ASAGEKR-QDDSPDYTIFVGDLAGDVTDYVLQETFRARYNSVKGAKVVIDRLTGRT 261
           NW  A AGEKR Q + PD+TIFVGDLA +VTDY+L +TF+  Y SVKGAKVV+DR TGR+
Sbjct: 138 NWAQAGAGEKRFQTEGPDHTIFVGDLAPEVTDYMLSDTFKNVYGSVKGAKVVLDRTTGRS 197

Query: 262 KGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKN 299
           KGYGFV+F DE+EQMRAMTEMNG +CS+RPMRIGPAANKN
Sbjct: 198 KGYGFVRFADENEQMRAMTEMNGQYCSTRPMRIGPAANKN 235

[Close]
BLAST of Cucsat.G14323 vs. NCBI nr
Match: XP_011652720.1 (polyadenylate-binding protein RBP45 isoform X2 [Cucumis sativus] >KAE8652668.1 hypothetical protein Csa_013159 [Cucumis sativus])

HSP 1 Score: 497 bits (1280), Expect = 1.25e-173
Identity = 244/247 (98.79%), Postives = 245/247 (99.19%), Query Frame = 0 

Query: 61  MQPAPGVAPHNIPHQAPQYQQQQPPYMMMQPQPPQAQPVPQMWPQQPQAGSPQGQPPQSA 120
           MQPAPGVAPHN+PHQAPQYQQQQPPYMMM PQPPQ QPVPQMWPQQPQAGSPQGQPPQSA
Sbjct: 1   MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQPQPVPQMWPQQPQAGSPQGQPPQSA 60

Query: 121 NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 180
           NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA
Sbjct: 61  NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 120

Query: 181 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 240
           ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR
Sbjct: 121 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 180

Query: 241 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS 300
           YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS
Sbjct: 181 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS 240

Query: 301 GGQQFSK 307
           GGQQFSK
Sbjct: 241 GGQQFSK 247

[Close]
BLAST of Cucsat.G14323 vs. NCBI nr
Match: XP_004145109.1 (polyadenylate-binding protein RBP45 isoform X1 [Cucumis sativus])

HSP 1 Score: 497 bits (1280), Expect = 1.34e-173
Identity = 244/247 (98.79%), Postives = 245/247 (99.19%), Query Frame = 0 

Query: 61  MQPAPGVAPHNIPHQAPQYQQQQPPYMMMQPQPPQAQPVPQMWPQQPQAGSPQGQPPQSA 120
           MQPAPGVAPHN+PHQAPQYQQQQPPYMMM PQPPQ QPVPQMWPQQPQAGSPQGQPPQSA
Sbjct: 1   MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQPQPVPQMWPQQPQAGSPQGQPPQSA 60

Query: 121 NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 180
           NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA
Sbjct: 61  NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 120

Query: 181 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 240
           ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR
Sbjct: 121 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 180

Query: 241 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS 300
           YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS
Sbjct: 181 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS 240

Query: 301 GGQQFSK 307
           GGQQFSK
Sbjct: 241 GGQQFSK 247

[Close]
BLAST of Cucsat.G14323 vs. NCBI nr
Match: XP_004145107.1 (polyadenylate-binding protein RBP45 [Cucumis sativus])

HSP 1 Score: 497 bits (1279), Expect = 2.19e-173
Identity = 244/247 (98.79%), Postives = 245/247 (99.19%), Query Frame = 0 

Query: 61  MQPAPGVAPHNIPHQAPQYQQQQPPYMMMQPQPPQAQPVPQMWPQQPQAGSPQGQPPQSA 120
           MQPAPGVAPHNIPHQAPQYQQQQPPYMMMQPQPPQAQPVPQMWPQQPQAGSPQGQPPQ A
Sbjct: 1   MQPAPGVAPHNIPHQAPQYQQQQPPYMMMQPQPPQAQPVPQMWPQQPQAGSPQGQPPQPA 60

Query: 121 NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 180
           NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA
Sbjct: 61  NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 120

Query: 181 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 240
           ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR
Sbjct: 121 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 180

Query: 241 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS 300
           YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQ+RAMTEMNGVHCSSRPMRIGPAANKNTS
Sbjct: 181 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQIRAMTEMNGVHCSSRPMRIGPAANKNTS 240

Query: 301 GGQQFSK 307
           G QQFSK
Sbjct: 241 GSQQFSK 247

[Close]
BLAST of Cucsat.G14323 vs. NCBI nr
Match: XP_008441163.1 (PREDICTED: polyadenylate-binding protein RBP45-like [Cucumis melo] >KAA0056864.1 polyadenylate-binding protein RBP45-like [Cucumis melo var. makuwa] >TYJ99367.1 polyadenylate-binding protein RBP45-like [Cucumis melo var. makuwa])

HSP 1 Score: 496 bits (1276), Expect = 6.04e-173
Identity = 243/247 (98.38%), Postives = 245/247 (99.19%), Query Frame = 0 

Query: 61  MQPAPGVAPHNIPHQAPQYQQQQPPYMMMQPQPPQAQPVPQMWPQQPQAGSPQGQPPQSA 120
           MQPAPGVAPHN+PHQAPQYQQQQPPYMMMQPQPPQAQPVPQMWPQQPQAGSPQGQPPQ A
Sbjct: 1   MQPAPGVAPHNMPHQAPQYQQQQPPYMMMQPQPPQAQPVPQMWPQQPQAGSPQGQPPQPA 60

Query: 121 NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 180
           NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA
Sbjct: 61  NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 120

Query: 181 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 240
           ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR
Sbjct: 121 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 180

Query: 241 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS 300
           YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQ+RAMTEMNGVHCSSRPMRIGPAANKNTS
Sbjct: 181 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQIRAMTEMNGVHCSSRPMRIGPAANKNTS 240

Query: 301 GGQQFSK 307
           G QQFSK
Sbjct: 241 GSQQFSK 247

[Close]
BLAST of Cucsat.G14323 vs. NCBI nr
Match: XP_008441150.1 (PREDICTED: polyadenylate-binding protein RBP45-like isoform X4 [Cucumis melo])

HSP 1 Score: 493 bits (1269), Expect = 5.87e-172
Identity = 242/247 (97.98%), Postives = 243/247 (98.38%), Query Frame = 0 

Query: 61  MQPAPGVAPHNIPHQAPQYQQQQPPYMMMQPQPPQAQPVPQMWPQQPQAGSPQGQPPQSA 120
           MQPAPGVAPHN+PHQAPQYQQQQPPYMMM PQPPQ QPVPQMWPQQPQAGSPQGQPPQ A
Sbjct: 1   MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQPQPVPQMWPQQPQAGSPQGQPPQPA 60

Query: 121 NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 180
           NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA
Sbjct: 61  NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 120

Query: 181 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 240
           ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR
Sbjct: 121 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 180

Query: 241 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS 300
           YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS
Sbjct: 181 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS 240

Query: 301 GGQQFSK 307
           G QQFSK
Sbjct: 241 GSQQFSK 247

[Close]
BLAST of Cucsat.G14323 vs. ExPASy TrEMBL
Match: A0A0A0LX40 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G063550 PE=4 SV=1)

HSP 1 Score: 533 bits (1372), Expect = 1.86e-188
Identity = 265/275 (96.36%), Postives = 268/275 (97.45%), Query Frame = 0 

Query: 54  FLPFSITMQPAPGVAPHNIPHQAPQYQQQQPPYMMMQPQPPQAQPVPQMWPQQPQAGSPQ 113
           F  FS + +PAPGVAPHNIPHQAPQYQQQQPPYMMMQPQPPQAQPVPQMWPQQPQAGSPQ
Sbjct: 96  FASFSAS-RPAPGVAPHNIPHQAPQYQQQQPPYMMMQPQPPQAQPVPQMWPQQPQAGSPQ 155

Query: 114 GQPPQSANGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIE 173
           GQPPQ ANGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIE
Sbjct: 156 GQPPQPANGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIE 215

Query: 174 FLTRPAAERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVL 233
           FLTRPAAERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVL
Sbjct: 216 FLTRPAAERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVL 275

Query: 234 QETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGP 293
           QETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQ+RAMTEMNGVHCSSRPMRIGP
Sbjct: 276 QETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQIRAMTEMNGVHCSSRPMRIGP 335

Query: 294 AANKNTSGGQQFSKRCQKALSAWGPLLISADMLTL 328
           AANKNTSG QQFSKRCQKALSAWGPLLISAD LTL
Sbjct: 336 AANKNTSGSQQFSKRCQKALSAWGPLLISADTLTL 369

[Close]
BLAST of Cucsat.G14323 vs. ExPASy TrEMBL
Match: A0A5A7UNS2 (Polyadenylate-binding protein RBP45-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005850 PE=4 SV=1)

HSP 1 Score: 496 bits (1276), Expect = 2.92e-173
Identity = 243/247 (98.38%), Postives = 245/247 (99.19%), Query Frame = 0 

Query: 61  MQPAPGVAPHNIPHQAPQYQQQQPPYMMMQPQPPQAQPVPQMWPQQPQAGSPQGQPPQSA 120
           MQPAPGVAPHN+PHQAPQYQQQQPPYMMMQPQPPQAQPVPQMWPQQPQAGSPQGQPPQ A
Sbjct: 1   MQPAPGVAPHNMPHQAPQYQQQQPPYMMMQPQPPQAQPVPQMWPQQPQAGSPQGQPPQPA 60

Query: 121 NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 180
           NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA
Sbjct: 61  NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 120

Query: 181 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 240
           ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR
Sbjct: 121 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 180

Query: 241 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS 300
           YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQ+RAMTEMNGVHCSSRPMRIGPAANKNTS
Sbjct: 181 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQIRAMTEMNGVHCSSRPMRIGPAANKNTS 240

Query: 301 GGQQFSK 307
           G QQFSK
Sbjct: 241 GSQQFSK 247

[Close]
BLAST of Cucsat.G14323 vs. ExPASy TrEMBL
Match: A0A1S3B3F4 (polyadenylate-binding protein RBP45-like OS=Cucumis melo OX=3656 GN=LOC103485380 PE=4 SV=1)

HSP 1 Score: 496 bits (1276), Expect = 2.92e-173
Identity = 243/247 (98.38%), Postives = 245/247 (99.19%), Query Frame = 0 

Query: 61  MQPAPGVAPHNIPHQAPQYQQQQPPYMMMQPQPPQAQPVPQMWPQQPQAGSPQGQPPQSA 120
           MQPAPGVAPHN+PHQAPQYQQQQPPYMMMQPQPPQAQPVPQMWPQQPQAGSPQGQPPQ A
Sbjct: 1   MQPAPGVAPHNMPHQAPQYQQQQPPYMMMQPQPPQAQPVPQMWPQQPQAGSPQGQPPQPA 60

Query: 121 NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 180
           NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA
Sbjct: 61  NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 120

Query: 181 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 240
           ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR
Sbjct: 121 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 180

Query: 241 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS 300
           YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQ+RAMTEMNGVHCSSRPMRIGPAANKNTS
Sbjct: 181 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQIRAMTEMNGVHCSSRPMRIGPAANKNTS 240

Query: 301 GGQQFSK 307
           G QQFSK
Sbjct: 241 GSQQFSK 247

[Close]
BLAST of Cucsat.G14323 vs. ExPASy TrEMBL
Match: A0A1S3B3E5 (polyadenylate-binding protein RBP45-like isoform X4 OS=Cucumis melo OX=3656 GN=LOC103485366 PE=4 SV=1)

HSP 1 Score: 493 bits (1269), Expect = 2.84e-172
Identity = 242/247 (97.98%), Postives = 243/247 (98.38%), Query Frame = 0 

Query: 61  MQPAPGVAPHNIPHQAPQYQQQQPPYMMMQPQPPQAQPVPQMWPQQPQAGSPQGQPPQSA 120
           MQPAPGVAPHN+PHQAPQYQQQQPPYMMM PQPPQ QPVPQMWPQQPQAGSPQGQPPQ A
Sbjct: 1   MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQPQPVPQMWPQQPQAGSPQGQPPQPA 60

Query: 121 NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 180
           NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA
Sbjct: 61  NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 120

Query: 181 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 240
           ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR
Sbjct: 121 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 180

Query: 241 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS 300
           YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS
Sbjct: 181 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS 240

Query: 301 GGQQFSK 307
           G QQFSK
Sbjct: 241 GSQQFSK 247

[Close]
BLAST of Cucsat.G14323 vs. ExPASy TrEMBL
Match: A0A1S3B2A3 (polyadenylate-binding protein RBP45-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103485366 PE=4 SV=1)

HSP 1 Score: 493 bits (1269), Expect = 2.94e-172
Identity = 242/247 (97.98%), Postives = 243/247 (98.38%), Query Frame = 0 

Query: 61  MQPAPGVAPHNIPHQAPQYQQQQPPYMMMQPQPPQAQPVPQMWPQQPQAGSPQGQPPQSA 120
           MQPAPGVAPHN+PHQAPQYQQQQPPYMMM PQPPQ QPVPQMWPQQPQAGSPQGQPPQ A
Sbjct: 1   MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQPQPVPQMWPQQPQAGSPQGQPPQPA 60

Query: 121 NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 180
           NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA
Sbjct: 61  NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 120

Query: 181 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 240
           ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR
Sbjct: 121 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 180

Query: 241 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS 300
           YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS
Sbjct: 181 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS 240

Query: 301 GGQQFSK 307
           G QQFSK
Sbjct: 241 GSQQFSK 247

The following BLAST results are available for this feature:
BLAST of Cucsat.G14323 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q0J9Y24.1e-8065.22RNA-binding protein L OS=Oryza sativa subsp. japonica OX=39947 GN=RBP-L PE=1 SV=... [more]
Q9LEB41.6e-7962.78Polyadenylate-binding protein RBP45 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP4... [more]
Q9SAB37.8e-7965.10Polyadenylate-binding protein RBP45B OS=Arabidopsis thaliana OX=3702 GN=RBP45B P... [more]
Q93W347.8e-7159.36Polyadenylate-binding protein RBP45C OS=Arabidopsis thaliana OX=3702 GN=RBP45C P... [more]
Q9FPJ82.1e-6864.55Polyadenylate-binding protein RBP45A OS=Arabidopsis thaliana OX=3702 GN=RBP45A P... [more]
BLAST of Cucsat.G14323 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011652720.11.25e-17398.79polyadenylate-binding protein RBP45 isoform X2 [Cucumis sativus] >KAE8652668.1 h... [more]
XP_004145109.11.34e-17398.79polyadenylate-binding protein RBP45 isoform X1 [Cucumis sativus][more]
XP_004145107.12.19e-17398.79polyadenylate-binding protein RBP45 [Cucumis sativus][more]
XP_008441163.16.04e-17398.38PREDICTED: polyadenylate-binding protein RBP45-like [Cucumis melo] >KAA0056864.1... [more]
XP_008441150.15.87e-17297.98PREDICTED: polyadenylate-binding protein RBP45-like isoform X4 [Cucumis melo][more]
BLAST of Cucsat.G14323 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LX401.86e-18896.36Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G063550 PE=4 SV=1[more]
A0A5A7UNS22.92e-17398.38Polyadenylate-binding protein RBP45-like OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A1S3B3F42.92e-17398.38polyadenylate-binding protein RBP45-like OS=Cucumis melo OX=3656 GN=LOC103485380... [more]
A0A1S3B3E52.84e-17297.98polyadenylate-binding protein RBP45-like isoform X4 OS=Cucumis melo OX=3656 GN=L... [more]
A0A1S3B2A32.94e-17297.98polyadenylate-binding protein RBP45-like isoform X3 OS=Cucumis melo OX=3656 GN=L... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 223..297
e-value: 1.1E-18
score: 78.1
coord: 132..207
e-value: 3.8E-13
score: 59.7
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 133..197
e-value: 2.0E-12
score: 46.8
coord: 224..291
e-value: 2.7E-13
score: 49.5
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 131..211
score: 15.630307
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 222..301
score: 16.3978
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 75..214
e-value: 6.0E-24
score: 86.5
coord: 215..315
e-value: 2.9E-20
score: 74.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 92..106
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 107..125
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 73..129
NoneNo IPR availablePANTHERPTHR47640:SF48POLYADENYLATE-BINDING PROTEIN RBP45Bcoord: 82..311
NoneNo IPR availablePANTHERPTHR47640TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATEDcoord: 82..311
NoneNo IPR availableCDDcd12345RRM2_SECp43_likecoord: 221..300
e-value: 1.86148E-49
score: 158.211
NoneNo IPR availableCDDcd12344RRM1_SECp43_likecoord: 132..210
e-value: 1.93069E-47
score: 152.802
NoneNo IPR availableSUPERFAMILY81995beta-sandwich domain of Sec23/24coord: 65..127
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 129..304

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G14323.T7Cucsat.G14323.T7mRNA
Cucsat.G14323.T6Cucsat.G14323.T6mRNA
Cucsat.G14323.T5Cucsat.G14323.T5mRNA
Cucsat.G14323.T4Cucsat.G14323.T4mRNA
Cucsat.G14323.T3Cucsat.G14323.T3mRNA
Cucsat.G14323.T2Cucsat.G14323.T2mRNA
Cucsat.G14323.T1Cucsat.G14323.T1mRNA
Cucsat.G14323.T9Cucsat.G14323.T9mRNA
Cucsat.G14323.T8Cucsat.G14323.T8mRNA
Cucsat.G14323.T20Cucsat.G14323.T20mRNA
Cucsat.G14323.T17Cucsat.G14323.T17mRNA
Cucsat.G14323.T16Cucsat.G14323.T16mRNA
Cucsat.G14323.T15Cucsat.G14323.T15mRNA
Cucsat.G14323.T14Cucsat.G14323.T14mRNA
Cucsat.G14323.T13Cucsat.G14323.T13mRNA
Cucsat.G14323.T12Cucsat.G14323.T12mRNA
Cucsat.G14323.T11Cucsat.G14323.T11mRNA
Cucsat.G14323.T10Cucsat.G14323.T10mRNA
Cucsat.G14323.T26Cucsat.G14323.T26mRNA
Cucsat.G14323.T25Cucsat.G14323.T25mRNA
Cucsat.G14323.T21Cucsat.G14323.T21mRNA
Cucsat.G14323.T22Cucsat.G14323.T22mRNA
Cucsat.G14323.T30Cucsat.G14323.T30mRNA
Cucsat.G14323.T29Cucsat.G14323.T29mRNA
Cucsat.G14323.T18Cucsat.G14323.T18mRNA
Cucsat.G14323.T19Cucsat.G14323.T19mRNA
Cucsat.G14323.T24Cucsat.G14323.T24mRNA
Cucsat.G14323.T33Cucsat.G14323.T33mRNA
Cucsat.G14323.T28Cucsat.G14323.T28mRNA
Cucsat.G14323.T23Cucsat.G14323.T23mRNA
Cucsat.G14323.T27Cucsat.G14323.T27mRNA
Cucsat.G14323.T32Cucsat.G14323.T32mRNA
Cucsat.G14323.T31Cucsat.G14323.T31mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003723 RNA binding
molecular_function GO:0003676 nucleic acid binding