Cucsat.G14323.T7 (mRNA) Cucumber (B10) v3

Overview
NameCucsat.G14323.T7
TypemRNA
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Descriptionpolyadenylate-binding protein RBP45-like
Locationctg1869: 5915191 .. 5926025 (-)
RNA-Seq ExpressionCucsat.G14323.T7
SyntenyCucsat.G14323.T7
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AATCTAATCGATTCCTACCGATCCCATTCCTTTTGCTTTCCTCCCTTTTCGCCTCCTTCTCGGCTTCTAGGGTTAGGGTTTCTCTCTTTGTCCGAACGACACACCCACCACTCTCTTTTTCTTTCTCCGTCTCCCCATCCTAAGGAGATTTGTTTTTCTTTTCTCCCCTTCTCCATAACGATGCAGCCTGCTCCTGGTGTTGCTCCTCACAACATTCCTCACCAGGCTCCTCAGTACCAACAACAGCAACCTCCTTACATGATGATGCAGCCTCAGCCCCCGCAAGCACAGCCTGTTCCTCAGATGTGGCCTCAACAGCCGCAGGCTGGTTCTCCACAGGGCCAACCCCCTCAACCTGCCAACGGGGATGAGGTTCGTACGCTCTGGATCGGAGACTTGCAGTACTGGATGGACGAGAACTATATCTTTAATTGTTTTGCTCATACTGGCGAGGTACGTCAGTCAACGCCACCCATTTTTAGATCTTTTGTGTATATGTCTTTATTATTTGTTTTCATTGCTGTTGTTGGGAAAAGATTTGGTTTTATAATTATTAGGTTGAGTTCTTGAAGATTTGTGCCCACACATGTTACTGCATTGTGATTTCGGTGGACAAGAATCGTTTCCATTTCTTCTTTCTTCTTTCTTGTTTATAATTGATGTTGTTTATATCTGCAGGTTTCCTCCGTGAAAGTGATTCGGAATAAGCAAACCGGCCAGTCCGAGGGTTACGGTTTTATTGAGTTTTTAACTCGTCCAGCTGCGGAAAGAGTACTTCAAACTTATAATGGCACCGCCATGCCCAATGGGGCACAAAATTTTAGATTGAACTGGGCATCAGCAGGGGAGAAGCGACAAGATGATTCTCCTGATTACACTATTTTTGTGGGAGATTTGGCTGGTGATGTTACTGATTATGTGCTACAAGAAACATTTAGGGCACGGTATAACTCAGTTAAGGGTGCTAAAGTTGTGATCGATAGGCTCACTGGACGTACTAAGGGTTACGGTTTCGTAAAGTTTGGGGATGAGTCTGAACAAATTCGGGCTATGACTGAGATGAACGGTGTTCACTGTTCATCCAGACCCATGCGAATCGGACCAGCAGCTAACAAGAACACTTCTGGCAGTCAGCAGTTTTCGAAAAGTAAATACGAACTCCCCCCCCCCGAAACTGGAAAATTTTAAATGAAAAACAAGGCATTGAATTTTGTTTGGAATATCTTCTCAGTCATTCATTCATCATATGGATGTGCCCATTTGTGCTTACTGATTAGTGTTTTTCGATTCATTTTGCTTTCAATATGGCAAGATGCAATGCAACTTCTATTTTCTGTCCTGATTTAGCTCCTCTCCGTTACTTCTATTTCTAGTTTCCAGCATTTTAATTCCCCTCTCGTATACCTTGGAAGAATAGCCTTTCATGCCTTTTCCTTCGTGTACTTCCAATTCGAGCTTTGGTCATTTTAAGTACTATAAAGAAGAATTAATAAACTTATAAAACTCCTCTTTTCTTTAAGCAGGGTGTCAAAAGGCTCTGTCAGCTTGGGGTCCGCTACTGATTTCAGCTGACACGCTTACCCTTTAATACGTTGTTCCATTTAGGTCAGTTTTTTTTCCGCCAATGTCTTACCTCTTTCTTTTTATGTGGCATATTTATGCTGCGGTTTTTAATTCACCTTTAGTTCTGCAACGTTTAGTTTTTCCTTTGATTTGCATGGGTATTTTTTTCTCTCCCTGGCATTTTACCACTTCTAATTCCTTTATTTTTCTTTAAAGTTTAGGTCACTTGTCTTAGGTTCTTTAGCTAGATGGTTTTTTTAAATTTCCAGCAACTGGGAATTTGGAGTAACATAGTTTGGTTCTGAACTTTCCTTCTACAACTGCAGTAGGTCATATAGGTTGAGCTTGTCCTTCACCTCCTAATATTTTGGGTTTATGGGATTTACTCTATGTTTTATTTTCAATATTTGATGGTTGGATTCCCTTTTTGTAGACAAATCATCTATCAACAAAAGGTTTTGATACATTTCTTGATCTGCCTGAATTTTCATTTCTTACTAGCTTTTCATTCTGTAGCTCTGTATTTCGTTAAGTCTTTCCTTTGGAATATTCTATTCTTCTTCCATCGCGGTGGGTCTATTTTCATCCAAGTATGCTCTGTATGTATCTTTCTTGTAGTTAGGATTGTATTGATTGGTTTTGTTGATTTAAAGGCTTCTAGTTTTTTTTTTTTTAATGCTCATACCATTTCTTGGTGTGAATCATTTCATGTGATTGATTGGCTAAATAGTGGTGCGTGGCAGAATTTCCAATACGTCACATTATGGTTGCCTCAAGTCAGAAGTTGAAGAGGCTATATGTTTTATTTTAGTTCATTAGATCAGAATTTCTCGTGTATTATTATGTAGGCTTTTTCACAATTAATCTGGTCTCCATGATGAATCACTTGGTTATTTTGCATTTATTATGTTTGGCACAGTATCTTTTATTCTTCATATTCCGATCTCCATGTTATTGTTTTTGTATTGATATGAGCTGAAAGCCTTGAAGTTCTTCAAATCTTATGCCTTTTTGAAATTATAGGAGGCTTACATCTTTGAGGTGTAAAATAGGTAAACCTCAGTGAATGATAGAGAAGACAATAATCAAATATGGAAATTTTGAAGAGTTGGAATGTCGACATTATGGTGGCTTCTGTTTGATGGGAATTTTTAGGGGAGAATTAATTATCGATGTGGCACATTGTCTGCATTTTAAGACCATTTCAAGTTATCTTCATTTGAATAAAAAAAAAAATCAGGTCCCATAAGAGTTTAGTCCCCTCCCCCTCCGTAATATATATAATTATAATTATTTCCGTTGTTCGGTATTAGCTATTACAGCCAGGATGTGACTGTTATAATTCTGCATCTATTTAAAGAATGGATGTCTCTTTTCATGGATATTTTGATTGCTAGTCATTTGAATTTATCATGTTTTAGTTTGCATGTATCTTGGTTTTAATTTTCATTACTATTATTTACCATAACGATAATGCAACATGATAATGACTTGGGTAAAAATGATCTAAGGATTTTTTTAGTTCATGTTGATAGAAGATGTCATTTTAGTTTAATATTTTCAAATGCAGCTTCATACCAGAATCCTCCAGGCACACAGAATGAGAACGATCCAAATAATACAACTGTGGGTACTCCAATAATTTTCAATAGCAATATTATCTCATGGACGTATTTATGAGTTATTATTTGATTTTGTTTCAGATATTCGTGGGGAATTTGGATTCTAATGTCACTGATGAGCACTTGAGACAAGTATTCAGTCAGTATGGAGAGCTGGTGCATGTTAAGATTCCTGCAGGCAAACGATGTGGCTTTGTTCAATTTTCAGACAGGTTGGTATTTTCAAAAGCTTTCATGACACCTACGCCCCTTCTTCCCATCATGTGGTGTTCATTTGCTCATGAGTTTTGTATTTTGTTTTCCTTAATACTATTTTAGAAGCTGCGCCGAGGAAGCTTTGCGCATTTTGAATGGAACCCCAATTGGTGGGCAAAACATTAGACTTTCGTGGGGTCGTAGTCCTTCTAACAAACAGGTACTATTATTGTGCTTCACTTGTATTCTTGTATTCATTAAAGCAAATAATATATTAGCTTTATTGACCTCTATTTTAAATTTACAGCCTCAGGCTGATCCTAATCAATGGAATGGAGGAGGAGGTGGAGGAGGAGGATATTATGGATATGGACAAGGATATGAAAATTATAGCTATGCTCCAGCTGCCCAAGACCCTAACATGTTCTACAGTGGCTATGGTGGGTATGGGAACTACCAGCAACCAGCAACACAGCAGCCATCACAGCAACAAGGTGGATATATGTAGATGACAAGTTCTATTTCTCTTGCCTCACCTCTCAATTCGAATGAGACCCTAAACTTCTGCTTGTCATTTGTAGAAGATTTTGGAGATGTTACTCTCTCATCTATTCTAAACAAATATTCTGTATGACTCCGTTGACTTGATGTCAGTTGTGTGTTGTATTTGGCGTTAGAGGTTTTTGCGTGTTGTGTTATTTGTTTCTTTTCATATGATCATATCTATTATGGTAGGAGTTGAATGATCTTGTAATTTTCTCAAGTCCTTGTTAAAGGCTGTACGTGGGTTAACTACTTACTACTTATGTTCTTGCTGATGTTTCTCTACCCTATTTCACTTTTTCTGGCTTGAAACTGTTTGTTATGTTTTTTCATAGTATTACTGTACAATGGGAATTGTCGTCGAACCATTGAGACGTTTGGTTTCTGAAATTGTTCAACTTTTGCTTGTACAATATTGAAGGTGTATTCATTGTTTAATTAAAATCGGTTAGCCATTACTAGATTAATTCCAAATTTCTTAATCCTATTATGCGCCTTATGCAACAGTTCATTAATAGATTAATTCCAACTTGCTAGATTCAATTTTGTGCCTTATACGAGTTTATAAACACAAGTTCGCTTAAGTTTAAATTTCATCCTTAAATAAATACATAAATGGATTTGGACTAATGTTGCGAATTGAATTCTTTTCTGGACTAATGCCAAAGATACAATGTCTAAAATCTTCCAAAAGTGATCAGTCTTAATGAAAATGGAACTTTCATGTGAAGTATTGGCTCTTCATTCAAATCTCTTCACCTCCAAAGAGAGAAAATATATTTTCCAGACATTGTGGGAGATTGGAATAAGTTAGCTTATAATACTGAATTTAATAGGAAGACCTAATATTGGTGTGTGGTTGGTACTGTTTGGACTTCATGTGCTTGGTTTTGAATTAGTATTTGTGGCTTGAGTTGTGTTGTATGCTTATTCATTTATTGGGTTGTAGATTTCTTCAAACTAAATAATTTTAGTTAAAAATTCCAACAAAATTCAACCATGAAATATTTGACTTGACTCAATTCGAGTTACTCGAGCAAAAAGTAAAATTTAGTAGGTGGTTTTCTTATTTAATTATTTTTATATATTAAAATAAGACATGTTTTACTCATGTTCAACGAATAATGAATCAACGGTGATCTAAAAAGGATTCATGTGATTATGTTTAGTGTTGTTTAATTATGTTATAATACAAGGAGAGCACATGTCTAAATAAGTTGTCATCCTATTGATAAACACTAATGCTACCATTATCGTTTGTGATTATCATCATTGTCACTCTTTTATAGAAAAAACTATGGGTTAACACGAGATTTTGACCAAATAAATTTTATTTGTGAAAATGCAAATATTACAATATTTAATTTTTACCGTCTAGTATGTTCTCTTAAATATATAAAATTCAATTTTTAAGTTTGTTGATCTTCTTCTATTATGAGTCGTTGGACCTGTTGATCTTTTTTAGGATCAATCTTCAACTTGTAGATGGTGAAAAAACGATTAATTTGATGAAGTCTTCAAAATTTTCAGAATATCAGTCTTCAGTTTTTATATGATGAAAAGTCGATCAATTAGTCGAAGTTTTCAAACATTTGAAAAGTTCATTTTTCAATTTGTAGATGATGCATATACGACAAAGTTGTTGAAGAAAATAAGATATATTCATTTGAAGAATAGATGGTGAACTTGTTGAAAACGAATAAATGATTTGTTCGCTAGAGATGGTCAATCAAATATGAATATGACACATTCTCTTTCTTGAAGAATAGATTCACGATTTGTTGAAGAACAATTTGTGGAATTTTCTTAGATTAATGGATCTATGTCGAATGCCTCAAGTGAAGGATTAGCTACGGTCTATTGACTTGGATTTGGTTCAGTTTCGACCCATCTCTTATATTAAATAGTTAACATGATATAAAGTAATGTATTTGTTGAAGTTTATTAAGTCTAAATAGTAATTTATAACTAATAATTAAAAGTAACAATAATGATTAATGGATATTAACTTGTTAAGTAATCATACTTTCTTCTTTCTTCATTCTCCAGCCAAATCTCATAACAATAAACATATTTTTTGAAAGTTTTAAGAACCTTTTCTAAAACATTTAAAAGTTTATATACATTTTTCTGTGTAGTTTAGAAAAAAAAAAGTATTAAATAAAAAATATGACGATTTTATAGACCGAAAATAGTTTATCTACAAATACGAATGGAAAACCGTTTTCAAAAAATAGAATTCAAGTTTCCAAATATTTTAAAAAGCAGAGTTCAAAATTGAAAAGAAGAAATAGAAAACATAAAACAAAATGACAGATGTATTTAGAAATGTTTAACGATTTGTAGAGAAAAAAAGAAAAACATTTTATTTTCTTTGTTCTAAGTGAATCCAAATGTGAAAGGTTTGGTGAGTTTTTGGGATAAGTAAAAACGTACCAAACAAATTATTTTTATTTTATTTCCTTTTTTAAAACGATAAATGTAATCGATTCCCCCACTGGCCCCCTTCTCTTTGTTTCCTCCCTTTTCGCCCATTATCGGCTTCTAGGGTTAGGGTTTCTCTCTTTGTCCAGACGAGACACTCAAAACTCTCTTCTTCTTTCTCCTTCTTTCCTCACTAAGGAGATTCTCTTATCCCCTTTCTCCATTACCATGCAGCCTGCACCTGGTGTTGCCCCTCACAACATGCCTCACCAGGCCCCTCAGTACCAACAACAGCAACCTCCTTACATGATGATGCCCCCTCAGCCGCCCCAACCTCAGCCTGTTCCTCAGATGTGGCCTCAGCAGCCACAGGCCGGTTCCCCACAGGGCCAACCCCCTCAGTCTGCCAACGGGGATGAGGTTCGTACCCTCTGGATCGGAGACTTGCAGTACTGGATGGACGAGAACTATATCTTTAATTGTTTTGCTCATACTGGCGAGGTACGTCTAAGAACGCCACCCCACTTTAGATCTTGTGTGTGTGTGTCTTTATTATTTCTTTTTATCGTTGTTGTTGGGAAAAAAAAGATATAGTTTTGTGATTATTAGGTTGATTGCATAAAGATTTGTCTACACACATGTTGGTATATATGAAGCGGTTCCGAAATTTCGTTTTTTTTTTTGCTGTTGAGATTTAACATTGTTTGTCTCTCCAGGTTTCCTCTGTGAAAGTGATTCGGAACAAGCAAACCGGCCAGTCCGAGGGTTACGGTTTTATTGAGTTTTTAACTCGTCCAGCTGCAGAAAGAGTACTTCAAACTTATAATGGCACCGCCATGCCCAATGGGGCTCAAAATTTTAGATTGAACTGGGCATCAGCAGGGGAGAAGCGACAAGATGACTCTCCTGATTACACTATTTTTGTGGGAGATTTGGCTGGTGATGTTACTGATTATGTGCTACAAGAAACATTTAGGGCACGCTATAACTCAGTTAAGGGCGCTAAAGTTGTGATTGATAGGCTCACTGGACGCACTAAGGGTTATGGATTTGTTAAGTTTGGGGACGAGTCTGAACAAATGCGAGCAATGACTGAGATGAACGGTGTTCACTGTTCATCCAGACCCATGCGAATCGGACCAGCAGCTAACAAGAACACTTCTGGCGGTCAGCAGTTCTCGAAAAGTAAATACGAATTCCTCCCCAAACTGGAACATTTTAAATGAAAGACAGGGCATCAAATTTTGTATGGAATAGCTTGTCCATCATTCATTCATTGTATGGATGTGCCGTTTGTGTTTACTGATTTGTGTTTCTGGATGCATTTTGCTTTCTTATGGCCAGACGCAATTCTTATTTTCTGTCCTGATTTAGCTCCTCTCCGTTACTTTTATTACTAGTTTCTAGCATTTTAATTCCCCTCTCGTATACCTTGGAAGAATAGTAGCCTTTCATGCCTTTCCATCGTGTACTTCCAATTCGAGCTTTGGTCATTTTAAGTACTATAAAGAAGAATTAATAAACTTATAAAACTCCTCTTTTCTTTAAGCAGGGTGTCAAAAGGCTCTGTCAGCTTGGGGTCCGCTACTGATTTCAGCTGACATGCTTACCCTTTAGTACGTTGTTCCATTTAGGTCAGTTTTTTTCCCGCCAATGTCTTACCTCTTTTTTTTTATGTGGCATATTTATGCTACGGTTTTTAATTCACCTTTAGTTCTGCAACGTTTACCTTTTCCTATCATCTGCATGGGTATTTTTTTTGTCTCCCTGGTATTTCAGTCTTAATTCCGTTGGAAGTTTTTATTTTTTCTTTATTAAGTTTAGGGTACGCAGGTTCTTTAGCCAGTTTCATTATTGAAATTTCAGTATGTCTTGCGGCTATTGCTGGCCACTTAGGGTTGTGCTTGTCCTTCTCCTCCTGGCATTTAGGGTTATATGGTTTTACCTTCCTATTGTTTCATTTCAGTATTTGATGATTGGATCTCATTTATGTGTCCAACCCATTACCTGCAAAAGAATTTTGGTCAGCACAAAGTCATGTTTCTTAGTGTTATTAGGGTTCTTAGGAGTCTTATTTCTTACTAGTTTTTTGTTGTGTATCTTGGTATTCATTTTGTCATTCCTTTAGAATATTTCGTTCATCTTCTAAAGTTTTGAATTGGACATAGATATGTTCGGGTATACTTTCTTTGTTCTTTTAAGTAGGATCCTATTAATTGTTTTATTCTGTTCCGTTGTGTGAATCACTTTTATGTGAATGGTTGTGCAAGTTAGGTGCGGTGGATTCTGAGAATGGCATAATATGGTTGTTTGAGTCTGAAGTTAGGTACTCTAGTTGTGATATCTAGTTTTTTATGATGAAAAGCTTTATTATGTCAATTTCTTTTTTAATAATGTGTTTCTCTATGTTTTTCAAATTTACATTCTATGTTGAAATGAGCATGTTTATTTTCTTTTTTTATATTTTGGCCGTATGGTGATCATCATTAGATAATTATGATTGTGCCTTTATGGATTGTCAAAACTTCTATTTGAAATATTGTCTAGTTTTATATTTCTTAGGGCACACGTTGAAATTGGTACTTGTCTTCTAGTTATGCTATTTTGTAACAAATATCGCTCTAATGTATATTTTTCAAATTTCCCAATTTTGTTTGTGAAAATGGACTTCCTATGTACGTAATTTTCTGGATATCTTTTGTAGTTCTTGTTATTTTGGTATTCTTCGTGATTTCTCAATATGAGTACTTCTATGTTGCCCGTTATACCTACTGCCTCTGGTTTTTCCCCCTATAATGAAGCCGACTTTAGGTTGCATCGAACCATTTAAAACAGTGTGACTCTGTAATTCAAAATTTGCTTGTGTTTCAATTTTGTTGTTGGAGTCTTTTTTGAACATGCAACATATGGCATTGAGCCTAGTTCAACAGCCCTCTAAGCCAACCAGCTATGGAATTATTTGGTTGGAGGTTTGATTTGTTATAAGTGGAGCACACAGTGTTTATGCAGGTCTTGTGGATTCTATTTTTTATTTCTCAGTACACATTGCTTATTGCATTGATGTATATTATTTATGCAAGCTTGGACTGTAGCAGAATAATTGATATTGTGTGTTTAACAACTGCTGAACTGGTTGGTTCAAGTTAAAGAGCAAGTTCATTTAGGTTTGATTTTTTACTATTGCAGCTTCATATCAGAATCCTCAAGGGGCTCAGAATGAGAATGATCCAAACAATACGACTGTGGGTTCTTTACCTTATTTTTCCTTCGTCATGTAATTTTATTTGAGTTTTCTAACTTCTGAAATCCTATTGCAGATATTTGTGGGCAATTTGGATGCTAACGTGACAGACGAACACTTGCGACAAGTATTTGGTCAATATGGGGAATTGGTGCATGTAAAGATACCTGTAGGCAAACGATGTGGTTTCGTTCAATTTGCTGACAGGTTTGTATTTTGTTTCTTTTAAAAATATGAAACAGCTTGGTAGTTCTAACAAATGTAACCTAACATCTTAATCTCTCCTGAATTGGCTTGGACACATTTGATGGTTATTTCAATTTTGTTTTTAGGAACTGTGCTGAGGAAGCGCTACGTGTGTTGAATGGAACACAAATTGGTGGACAGAACATTAGACTCTCATGGGGACGTAGTCCTTCAAATAAACAGGTTGTGGTATTGTACTCTTTGTGTCCGTTGATGGTTATTGATTATAGTTCTTTCCGAATGTTCATTATTTTCTCATCTTTTTAGCCACAGGCGGACCCTAACCAATGGAATGGAGGTGGCTATTACGGATATGGACAAGGATACGAAAACTATAGCTATGCCCCAGCTCCTCAGGACCCTAATATGTTCTACAGTGGCTATGGTGGGTATGGAAATTACCAGCAGCCTCCCCCACAACAACCGCAGCAGCAGCAGCAAGGAGGATACATGTAGATTTGAAGTTTTGTTTACTCTGCCGTGGCCGCTCCCCTACCGAATCTCCCGGGGATATGATGGTTAAAGATTTTGGCAAAGTTATTTCACCCTCCCATTACATCCATTCTGAAGAACTCATCCTTTTCCTATTTTCTGTTCTACCTAAACTCTTTGATGACATGAGACATCTTTTCTTTTTTATTTATTATTATGTTATCCCGCAGAAGTTTTATTACGACTCTGTGTCGTTTATTTTCTATCACTACATTTTTGGTCTTTTGATGAGAGAGAATCTGGAGGCTTTTTGCCTTTGCTTATGAGTATTGCATTTTATACTGATTTAAACACTGACAAGTAATTCATCCCTAGCAAATTTATGGCCGCTGTGGGGTTGTGTTTTGTTTTTGTTTTTTCCGTTTCTGTTTTCTTCAGTACTTGTGAAAATTGTGCTACAACTATATTGTCCTATTTTATTGAATTGTATGGCTGTGGTATGAACACTTTTCCATGTGGGTCTTGACTTAGGATTACTACTTTTCAACCTTATTTAGTTTGTAAGATTT

Coding sequence (CDS)

AATCTAATCGATTCCTACCGATCCCATTCCTTTTGCTTTCCTCCCTTTTCGCCTCCTTCTCGGCTTCTAGGGTTAGGGTTTCTCTCTTTGTCCGAACGACACACCCACCACTCTCTTTTTCTTTCTCCGTCTCCCCATCCTAAGGAGATTTGTTTTTCTTTTCTCCCCTTCTCCATAACGATGCAGCCTGCTCCTGGTGTTGCTCCTCACAACATTCCTCACCAGGCTCCTCAGTACCAACAACAGCAACCTCCTTACATGATGATGCAGCCTCAGCCCCCGCAAGCACAGCCTGTTCCTCAGATGTGGCCTCAACAGCCGCAGGCCGGTTCCCCACAGGGCCAACCCCCTCAGTCTGCCAACGGGGATGAGGTTCGTACCCTCTGGATCGGAGACTTGCAGTACTGGATGGACGAGAACTATATCTTTAATTGTTTTGCTCATACTGGCGAGGTTTCCTCTGTGAAAGTGATTCGGAACAAGCAAACCGGCCAGTCCGAGGGTTACGGTTTTATTGAGTTTTTAACTCGTCCAGCTGCAGAAAGAGTACTTCAAACTTATAATGGCACCGCCATGCCCAATGGGGCTCAAAATTTTAGATTGAACTGGGCATCAGCAGGGGAGAAGCGACAAGATGACTCTCCTGATTACACTATTTTTGTGGGAGATTTGGCTGGTGATGTTACTGATTATGTGCTACAAGAAACATTTAGGGCACGCTATAACTCAGTTAAGGGCGCTAAAGTTGTGATTGATAGGCTCACTGGACGCACTAAGGGTTATGGATTTGTTAAGTTTGGGGACGAGTCTGAACAAATGCGAGCAATGACTGAGATGAACGGTGTTCACTGTTCATCCAGACCCATGCGAATCGGACCAGCAGCTAACAAGAACACTTCTGGCGGTCAGCAGTTCTCGAAAAGGTGTCAAAAGGCTCTGTCAGCTTGGGGTCCGCTACTGATTTCAGCTGACATGCTTACCCTTTAG

Protein sequence

NLIDSYRSHSFCFPPFSPPSRLLGLGFLSLSERHTHHSLFLSPSPHPKEICFSFLPFSITMQPAPGVAPHNIPHQAPQYQQQQPPYMMMQPQPPQAQPVPQMWPQQPQAGSPQGQPPQSANGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTSGGQQFSKRCQKALSAWGPLLISADMLTL
Homology
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BLAST of Cucsat.G14323.T7 vs. ExPASy Swiss-Prot
Match: Q0J9Y2 (RNA-binding protein L OS=Oryza sativa subsp. japonica OX=39947 GN=RBP-L PE=1 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 4.1e-80
Identity = 165/253 (65.22%), Postives = 188/253 (74.31%), Query Frame = 0 

Query: 67  VAPHNIPHQAPQYQQQQPPYMMMQPQPPQAQPVPQMWPQQPQAGSPQGQP-PQSANGDEV 126
           + P   PHQ      QQPP M  QP PPQA    Q+ P QP   +P  Q  P  A  DEV
Sbjct: 32  IPPPMPPHQYGAPPPQQPPAMWGQP-PPQAH-YGQVPPPQPYYAAPPPQAMPAPAAADEV 91

Query: 127 RTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQ 186
           +TLWIGDLQ WMDE+YI+NCFA TGEV SVK+IR+KQ+GQ +GYGF+EF +R AA+R+LQ
Sbjct: 92  KTLWIGDLQPWMDESYIYNCFAATGEVQSVKLIRDKQSGQLQGYGFVEFTSRAAADRILQ 151

Query: 187 TYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYNSVK 246
           TYNG  MPN    FRLNWASAGEKR DD+PDYTIFVGDLA DVTDY+LQETFR  Y SVK
Sbjct: 152 TYNGQMMPNVEMVFRLNWASAGEKR-DDTPDYTIFVGDLAADVTDYLLQETFRVHYPSVK 211

Query: 247 GAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTSGGQQF 306
           GAKVV D++T R+KGYGFVKFGD +EQ RAMTEMNG+ CSSRPMRIGPAANK T+G Q+ 
Sbjct: 212 GAKVVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMLCSSRPMRIGPAANKKTTGVQER 271

Query: 307 SKRCQKALSAWGP 319
               Q A S   P
Sbjct: 272 VPNAQGAQSENDP 281

[Close]
BLAST of Cucsat.G14323.T7 vs. ExPASy Swiss-Prot
Match: Q9LEB4 (Polyadenylate-binding protein RBP45 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP45 PE=1 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 1.6e-79
Identity = 167/266 (62.78%), Postives = 191/266 (71.80%), Query Frame = 0 

Query: 61  MQPAPGVAPHNIPHQAP------QYQQQQPP------YMM--MQPQPPQAQPVPQ-MWPQ 120
           M P  GVA    P  AP      QYQQQ PP      +MM   QPQ PQ QP  Q  W Q
Sbjct: 1   MMPQSGVAQ---PPMAPMSMDQHQYQQQAPPPTQQQQWMMPPQQPQQPQFQPQSQPAWAQ 60

Query: 121 QPQ------AGSPQGQPPQSANGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIR 180
           QP         +    P  + N +EVR+LWIGDLQYWMDENY+  CF HTGE+ S KVIR
Sbjct: 61  QPSQQQYGAMATTNPNPSPTGNPNEVRSLWIGDLQYWMDENYLSTCFYHTGELVSAKVIR 120

Query: 181 NKQTGQSEGYGFIEFLTRPAAERVLQTYNGTAMPNGAQNFRLNWASAGE-KRQDDSPDYT 240
           NKQTGQSEGYGF+EF +  AAE +LQTYNGT MPN  QNFR+NWAS G  +R+DDS ++T
Sbjct: 121 NKQTGQSEGYGFLEFRSHAAAETILQTYNGTLMPNVEQNFRMNWASLGAGERRDDSAEHT 180

Query: 241 IFVGDLAGDVTDYVLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTE 300
           IFVGDLA DVTDY+LQETF++ Y+SV+GAKVV DR+TGR+KGYGFVKF DESEQ+RAMTE
Sbjct: 181 IFVGDLAADVTDYILQETFKSVYSSVRGAKVVTDRITGRSKGYGFVKFADESEQLRAMTE 240

Query: 301 MNGVHCSSRPMRIGPAANKNTSGGQQ 305
           MNGV CS+RPMRIGPAANK   G  Q
Sbjct: 241 MNGVLCSTRPMRIGPAANKKPVGTPQ 263

[Close]
BLAST of Cucsat.G14323.T7 vs. ExPASy Swiss-Prot
Match: Q9SAB3 (Polyadenylate-binding protein RBP45B OS=Arabidopsis thaliana OX=3702 GN=RBP45B PE=1 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 7.8e-79
Identity = 166/255 (65.10%), Postives = 189/255 (74.12%), Query Frame = 0 

Query: 62  QPAP-GVAPHNIPHQAPQYQQQQPPYMMMQPQPPQAQPVPQMWPQQPQAGSPQGQPPQSA 121
           QP P G+ PH+ P   P   QQQ  Y         A P PQMW   PQA +P    P +A
Sbjct: 4   QPPPGGILPHHAP---PPSAQQQYGYQQPYGIAGAAPPPPQMW--NPQAAAPPSVQPTTA 63

Query: 122 NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 181
             DE+RTLWIGDLQYWMDEN+++ CFAHTGE+ S KVIRNKQTGQ EGYGFIEF +  AA
Sbjct: 64  --DEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAAA 123

Query: 182 ERVLQTYNGTAMPN-GAQNFRLNWA--SAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETF 241
           ERVLQT+N   +P+   Q FRLNWA  S+G+KR DDSPDYTIFVGDLA DVTDY+L ETF
Sbjct: 124 ERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKR-DDSPDYTIFVGDLAADVTDYILLETF 183

Query: 242 RARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANK 301
           RA Y SVKGAKVVIDR+TGRTKGYGFV+F DESEQ+RAMTEMNGV CS+RPMRIGPAA+K
Sbjct: 184 RASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTRPMRIGPAASK 243

Query: 302 NTSGGQQFSKRCQKA 313
               GQ+ S +   A
Sbjct: 244 KGVTGQRDSYQSSAA 250

[Close]
BLAST of Cucsat.G14323.T7 vs. ExPASy Swiss-Prot
Match: Q93W34 (Polyadenylate-binding protein RBP45C OS=Arabidopsis thaliana OX=3702 GN=RBP45C PE=2 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 7.8e-71
Identity = 149/251 (59.36%), Postives = 172/251 (68.53%), Query Frame = 0 

Query: 62  QPAP-----GVAPHNIPHQAPQYQQQQPPYMMMQPQPPQAQPVPQMWPQQ--PQAGSPQ- 121
           QP P        P  IP     Y QQQ  +MM   Q  Q QP P  W QQ  P +G PQ 
Sbjct: 4   QPPPASNGAATGPGQIPSDQQAYLQQQQSWMMQHQQQQQGQP-PAGWNQQSAPSSGQPQQ 63

Query: 122 -----GQPPQSANGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEG 181
                G      +  E+R+LWIGDLQ WMDENY+ N F  TGE ++ KVIRNKQ G SEG
Sbjct: 64  QQYGGGGSQNPGSAGEIRSLWIGDLQPWMDENYLMNVFGLTGEATAAKVIRNKQNGYSEG 123

Query: 182 YGFIEFLTRPAAERVLQTYNGTAMPNGAQNFRLNWA--SAGEKRQDDSPDYTIFVGDLAG 241
           YGFIEF+    AER LQTYNG  MP+  Q FRLNWA   AGE+RQ + P++T+FVGDLA 
Sbjct: 124 YGFIEFVNHATAERNLQTYNGAPMPSSEQAFRLNWAQLGAGERRQAEGPEHTVFVGDLAP 183

Query: 242 DVTDYVLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSS 298
           DVTD++L ETF+A Y+SVKGAKVV DR TGR+KGYGFV+F DESEQ+RAMTEMNG +CSS
Sbjct: 184 DVTDHMLTETFKAVYSSVKGAKVVNDRTTGRSKGYGFVRFADESEQIRAMTEMNGQYCSS 243

[Close]
BLAST of Cucsat.G14323.T7 vs. ExPASy Swiss-Prot
Match: Q9FPJ8 (Polyadenylate-binding protein RBP45A OS=Arabidopsis thaliana OX=3702 GN=RBP45A PE=2 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 2.1e-68
Identity = 142/220 (64.55%), Postives = 165/220 (75.00%), Query Frame = 0 

Query: 82  QQPPYMMMQPQPPQAQPVPQMWPQQPQAGSPQGQPPQSANGDEVRTLWIGDLQYWMDENY 141
           QQ  +MMMQ Q  Q Q      P          Q P SA+  +V++LWIGDLQ WMDENY
Sbjct: 18  QQHLWMMMQQQQQQQQMQLSAAPLGQHQYGIGSQNPGSAS--DVKSLWIGDLQQWMDENY 77

Query: 142 IFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQTYNGTAMPNGAQNFRL 201
           I + FA +GE +S KVIRNK TGQSEGYGFIEF++   AERVLQTYNG  MP+  Q FRL
Sbjct: 78  IMSVFAQSGEATSAKVIRNKLTGQSEGYGFIEFVSHSVAERVLQTYNGAPMPSTEQTFRL 137

Query: 202 NW--ASAGEKR-QDDSPDYTIFVGDLAGDVTDYVLQETFRARYNSVKGAKVVIDRLTGRT 261
           NW  A AGEKR Q + PD+TIFVGDLA +VTDY+L +TF+  Y SVKGAKVV+DR TGR+
Sbjct: 138 NWAQAGAGEKRFQTEGPDHTIFVGDLAPEVTDYMLSDTFKNVYGSVKGAKVVLDRTTGRS 197

Query: 262 KGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKN 299
           KGYGFV+F DE+EQMRAMTEMNG +CS+RPMRIGPAANKN
Sbjct: 198 KGYGFVRFADENEQMRAMTEMNGQYCSTRPMRIGPAANKN 235

[Close]
BLAST of Cucsat.G14323.T7 vs. NCBI nr
Match: XP_011652720.1 (polyadenylate-binding protein RBP45 isoform X2 [Cucumis sativus] >KAE8652668.1 hypothetical protein Csa_013159 [Cucumis sativus])

HSP 1 Score: 497 bits (1280), Expect = 1.25e-173
Identity = 244/247 (98.79%), Postives = 245/247 (99.19%), Query Frame = 0 

Query: 61  MQPAPGVAPHNIPHQAPQYQQQQPPYMMMQPQPPQAQPVPQMWPQQPQAGSPQGQPPQSA 120
           MQPAPGVAPHN+PHQAPQYQQQQPPYMMM PQPPQ QPVPQMWPQQPQAGSPQGQPPQSA
Sbjct: 1   MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQPQPVPQMWPQQPQAGSPQGQPPQSA 60

Query: 121 NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 180
           NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA
Sbjct: 61  NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 120

Query: 181 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 240
           ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR
Sbjct: 121 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 180

Query: 241 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS 300
           YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS
Sbjct: 181 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS 240

Query: 301 GGQQFSK 307
           GGQQFSK
Sbjct: 241 GGQQFSK 247

[Close]
BLAST of Cucsat.G14323.T7 vs. NCBI nr
Match: XP_004145109.1 (polyadenylate-binding protein RBP45 isoform X1 [Cucumis sativus])

HSP 1 Score: 497 bits (1280), Expect = 1.34e-173
Identity = 244/247 (98.79%), Postives = 245/247 (99.19%), Query Frame = 0 

Query: 61  MQPAPGVAPHNIPHQAPQYQQQQPPYMMMQPQPPQAQPVPQMWPQQPQAGSPQGQPPQSA 120
           MQPAPGVAPHN+PHQAPQYQQQQPPYMMM PQPPQ QPVPQMWPQQPQAGSPQGQPPQSA
Sbjct: 1   MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQPQPVPQMWPQQPQAGSPQGQPPQSA 60

Query: 121 NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 180
           NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA
Sbjct: 61  NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 120

Query: 181 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 240
           ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR
Sbjct: 121 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 180

Query: 241 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS 300
           YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS
Sbjct: 181 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS 240

Query: 301 GGQQFSK 307
           GGQQFSK
Sbjct: 241 GGQQFSK 247

[Close]
BLAST of Cucsat.G14323.T7 vs. NCBI nr
Match: XP_004145107.1 (polyadenylate-binding protein RBP45 [Cucumis sativus])

HSP 1 Score: 497 bits (1279), Expect = 2.19e-173
Identity = 244/247 (98.79%), Postives = 245/247 (99.19%), Query Frame = 0 

Query: 61  MQPAPGVAPHNIPHQAPQYQQQQPPYMMMQPQPPQAQPVPQMWPQQPQAGSPQGQPPQSA 120
           MQPAPGVAPHNIPHQAPQYQQQQPPYMMMQPQPPQAQPVPQMWPQQPQAGSPQGQPPQ A
Sbjct: 1   MQPAPGVAPHNIPHQAPQYQQQQPPYMMMQPQPPQAQPVPQMWPQQPQAGSPQGQPPQPA 60

Query: 121 NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 180
           NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA
Sbjct: 61  NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 120

Query: 181 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 240
           ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR
Sbjct: 121 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 180

Query: 241 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS 300
           YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQ+RAMTEMNGVHCSSRPMRIGPAANKNTS
Sbjct: 181 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQIRAMTEMNGVHCSSRPMRIGPAANKNTS 240

Query: 301 GGQQFSK 307
           G QQFSK
Sbjct: 241 GSQQFSK 247

[Close]
BLAST of Cucsat.G14323.T7 vs. NCBI nr
Match: XP_008441163.1 (PREDICTED: polyadenylate-binding protein RBP45-like [Cucumis melo] >KAA0056864.1 polyadenylate-binding protein RBP45-like [Cucumis melo var. makuwa] >TYJ99367.1 polyadenylate-binding protein RBP45-like [Cucumis melo var. makuwa])

HSP 1 Score: 496 bits (1276), Expect = 6.04e-173
Identity = 243/247 (98.38%), Postives = 245/247 (99.19%), Query Frame = 0 

Query: 61  MQPAPGVAPHNIPHQAPQYQQQQPPYMMMQPQPPQAQPVPQMWPQQPQAGSPQGQPPQSA 120
           MQPAPGVAPHN+PHQAPQYQQQQPPYMMMQPQPPQAQPVPQMWPQQPQAGSPQGQPPQ A
Sbjct: 1   MQPAPGVAPHNMPHQAPQYQQQQPPYMMMQPQPPQAQPVPQMWPQQPQAGSPQGQPPQPA 60

Query: 121 NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 180
           NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA
Sbjct: 61  NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 120

Query: 181 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 240
           ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR
Sbjct: 121 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 180

Query: 241 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS 300
           YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQ+RAMTEMNGVHCSSRPMRIGPAANKNTS
Sbjct: 181 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQIRAMTEMNGVHCSSRPMRIGPAANKNTS 240

Query: 301 GGQQFSK 307
           G QQFSK
Sbjct: 241 GSQQFSK 247

[Close]
BLAST of Cucsat.G14323.T7 vs. NCBI nr
Match: XP_008441150.1 (PREDICTED: polyadenylate-binding protein RBP45-like isoform X4 [Cucumis melo])

HSP 1 Score: 493 bits (1269), Expect = 5.87e-172
Identity = 242/247 (97.98%), Postives = 243/247 (98.38%), Query Frame = 0 

Query: 61  MQPAPGVAPHNIPHQAPQYQQQQPPYMMMQPQPPQAQPVPQMWPQQPQAGSPQGQPPQSA 120
           MQPAPGVAPHN+PHQAPQYQQQQPPYMMM PQPPQ QPVPQMWPQQPQAGSPQGQPPQ A
Sbjct: 1   MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQPQPVPQMWPQQPQAGSPQGQPPQPA 60

Query: 121 NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 180
           NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA
Sbjct: 61  NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 120

Query: 181 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 240
           ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR
Sbjct: 121 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 180

Query: 241 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS 300
           YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS
Sbjct: 181 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS 240

Query: 301 GGQQFSK 307
           G QQFSK
Sbjct: 241 GSQQFSK 247

[Close]
BLAST of Cucsat.G14323.T7 vs. ExPASy TrEMBL
Match: A0A0A0LX40 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G063550 PE=4 SV=1)

HSP 1 Score: 533 bits (1372), Expect = 1.86e-188
Identity = 265/275 (96.36%), Postives = 268/275 (97.45%), Query Frame = 0 

Query: 54  FLPFSITMQPAPGVAPHNIPHQAPQYQQQQPPYMMMQPQPPQAQPVPQMWPQQPQAGSPQ 113
           F  FS + +PAPGVAPHNIPHQAPQYQQQQPPYMMMQPQPPQAQPVPQMWPQQPQAGSPQ
Sbjct: 96  FASFSAS-RPAPGVAPHNIPHQAPQYQQQQPPYMMMQPQPPQAQPVPQMWPQQPQAGSPQ 155

Query: 114 GQPPQSANGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIE 173
           GQPPQ ANGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIE
Sbjct: 156 GQPPQPANGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIE 215

Query: 174 FLTRPAAERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVL 233
           FLTRPAAERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVL
Sbjct: 216 FLTRPAAERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVL 275

Query: 234 QETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGP 293
           QETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQ+RAMTEMNGVHCSSRPMRIGP
Sbjct: 276 QETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQIRAMTEMNGVHCSSRPMRIGP 335

Query: 294 AANKNTSGGQQFSKRCQKALSAWGPLLISADMLTL 328
           AANKNTSG QQFSKRCQKALSAWGPLLISAD LTL
Sbjct: 336 AANKNTSGSQQFSKRCQKALSAWGPLLISADTLTL 369

[Close]
BLAST of Cucsat.G14323.T7 vs. ExPASy TrEMBL
Match: A0A5A7UNS2 (Polyadenylate-binding protein RBP45-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005850 PE=4 SV=1)

HSP 1 Score: 496 bits (1276), Expect = 2.92e-173
Identity = 243/247 (98.38%), Postives = 245/247 (99.19%), Query Frame = 0 

Query: 61  MQPAPGVAPHNIPHQAPQYQQQQPPYMMMQPQPPQAQPVPQMWPQQPQAGSPQGQPPQSA 120
           MQPAPGVAPHN+PHQAPQYQQQQPPYMMMQPQPPQAQPVPQMWPQQPQAGSPQGQPPQ A
Sbjct: 1   MQPAPGVAPHNMPHQAPQYQQQQPPYMMMQPQPPQAQPVPQMWPQQPQAGSPQGQPPQPA 60

Query: 121 NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 180
           NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA
Sbjct: 61  NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 120

Query: 181 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 240
           ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR
Sbjct: 121 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 180

Query: 241 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS 300
           YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQ+RAMTEMNGVHCSSRPMRIGPAANKNTS
Sbjct: 181 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQIRAMTEMNGVHCSSRPMRIGPAANKNTS 240

Query: 301 GGQQFSK 307
           G QQFSK
Sbjct: 241 GSQQFSK 247

[Close]
BLAST of Cucsat.G14323.T7 vs. ExPASy TrEMBL
Match: A0A1S3B3F4 (polyadenylate-binding protein RBP45-like OS=Cucumis melo OX=3656 GN=LOC103485380 PE=4 SV=1)

HSP 1 Score: 496 bits (1276), Expect = 2.92e-173
Identity = 243/247 (98.38%), Postives = 245/247 (99.19%), Query Frame = 0 

Query: 61  MQPAPGVAPHNIPHQAPQYQQQQPPYMMMQPQPPQAQPVPQMWPQQPQAGSPQGQPPQSA 120
           MQPAPGVAPHN+PHQAPQYQQQQPPYMMMQPQPPQAQPVPQMWPQQPQAGSPQGQPPQ A
Sbjct: 1   MQPAPGVAPHNMPHQAPQYQQQQPPYMMMQPQPPQAQPVPQMWPQQPQAGSPQGQPPQPA 60

Query: 121 NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 180
           NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA
Sbjct: 61  NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 120

Query: 181 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 240
           ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR
Sbjct: 121 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 180

Query: 241 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS 300
           YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQ+RAMTEMNGVHCSSRPMRIGPAANKNTS
Sbjct: 181 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQIRAMTEMNGVHCSSRPMRIGPAANKNTS 240

Query: 301 GGQQFSK 307
           G QQFSK
Sbjct: 241 GSQQFSK 247

[Close]
BLAST of Cucsat.G14323.T7 vs. ExPASy TrEMBL
Match: A0A1S3B3E5 (polyadenylate-binding protein RBP45-like isoform X4 OS=Cucumis melo OX=3656 GN=LOC103485366 PE=4 SV=1)

HSP 1 Score: 493 bits (1269), Expect = 2.84e-172
Identity = 242/247 (97.98%), Postives = 243/247 (98.38%), Query Frame = 0 

Query: 61  MQPAPGVAPHNIPHQAPQYQQQQPPYMMMQPQPPQAQPVPQMWPQQPQAGSPQGQPPQSA 120
           MQPAPGVAPHN+PHQAPQYQQQQPPYMMM PQPPQ QPVPQMWPQQPQAGSPQGQPPQ A
Sbjct: 1   MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQPQPVPQMWPQQPQAGSPQGQPPQPA 60

Query: 121 NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 180
           NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA
Sbjct: 61  NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 120

Query: 181 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 240
           ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR
Sbjct: 121 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 180

Query: 241 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS 300
           YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS
Sbjct: 181 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS 240

Query: 301 GGQQFSK 307
           G QQFSK
Sbjct: 241 GSQQFSK 247

[Close]
BLAST of Cucsat.G14323.T7 vs. ExPASy TrEMBL
Match: A0A1S3B2A3 (polyadenylate-binding protein RBP45-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103485366 PE=4 SV=1)

HSP 1 Score: 493 bits (1269), Expect = 2.94e-172
Identity = 242/247 (97.98%), Postives = 243/247 (98.38%), Query Frame = 0 

Query: 61  MQPAPGVAPHNIPHQAPQYQQQQPPYMMMQPQPPQAQPVPQMWPQQPQAGSPQGQPPQSA 120
           MQPAPGVAPHN+PHQAPQYQQQQPPYMMM PQPPQ QPVPQMWPQQPQAGSPQGQPPQ A
Sbjct: 1   MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQPQPVPQMWPQQPQAGSPQGQPPQPA 60

Query: 121 NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 180
           NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA
Sbjct: 61  NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 120

Query: 181 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 240
           ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR
Sbjct: 121 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 180

Query: 241 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS 300
           YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS
Sbjct: 181 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS 240

Query: 301 GGQQFSK 307
           G QQFSK
Sbjct: 241 GSQQFSK 247

The following BLAST results are available for this feature:
BLAST of Cucsat.G14323.T7 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q0J9Y24.1e-8065.22RNA-binding protein L OS=Oryza sativa subsp. japonica OX=39947 GN=RBP-L PE=1 SV=... [more]
Q9LEB41.6e-7962.78Polyadenylate-binding protein RBP45 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP4... [more]
Q9SAB37.8e-7965.10Polyadenylate-binding protein RBP45B OS=Arabidopsis thaliana OX=3702 GN=RBP45B P... [more]
Q93W347.8e-7159.36Polyadenylate-binding protein RBP45C OS=Arabidopsis thaliana OX=3702 GN=RBP45C P... [more]
Q9FPJ82.1e-6864.55Polyadenylate-binding protein RBP45A OS=Arabidopsis thaliana OX=3702 GN=RBP45A P... [more]
BLAST of Cucsat.G14323.T7 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011652720.11.25e-17398.79polyadenylate-binding protein RBP45 isoform X2 [Cucumis sativus] >KAE8652668.1 h... [more]
XP_004145109.11.34e-17398.79polyadenylate-binding protein RBP45 isoform X1 [Cucumis sativus][more]
XP_004145107.12.19e-17398.79polyadenylate-binding protein RBP45 [Cucumis sativus][more]
XP_008441163.16.04e-17398.38PREDICTED: polyadenylate-binding protein RBP45-like [Cucumis melo] >KAA0056864.1... [more]
XP_008441150.15.87e-17297.98PREDICTED: polyadenylate-binding protein RBP45-like isoform X4 [Cucumis melo][more]
BLAST of Cucsat.G14323.T7 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LX401.86e-18896.36Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G063550 PE=4 SV=1[more]
A0A5A7UNS22.92e-17398.38Polyadenylate-binding protein RBP45-like OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A1S3B3F42.92e-17398.38polyadenylate-binding protein RBP45-like OS=Cucumis melo OX=3656 GN=LOC103485380... [more]
A0A1S3B3E52.84e-17297.98polyadenylate-binding protein RBP45-like isoform X4 OS=Cucumis melo OX=3656 GN=L... [more]
A0A1S3B2A32.94e-17297.98polyadenylate-binding protein RBP45-like isoform X3 OS=Cucumis melo OX=3656 GN=L... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 127..202
e-value: 3.8E-13
score: 59.7
coord: 218..292
e-value: 1.4E-18
score: 77.8
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 219..286
e-value: 7.8E-13
score: 48.1
coord: 128..192
e-value: 1.9E-12
score: 46.8
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 217..296
score: 16.517189
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 126..206
score: 15.630307
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 70..210
e-value: 4.2E-24
score: 87.0
coord: 211..310
e-value: 1.5E-20
score: 75.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 87..101
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 68..123
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 102..122
NoneNo IPR availablePANTHERPTHR47640:SF48POLYADENYLATE-BINDING PROTEIN RBP45Bcoord: 77..306
NoneNo IPR availablePANTHERPTHR47640TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATEDcoord: 77..306
NoneNo IPR availableCDDcd12344RRM1_SECp43_likecoord: 127..205
e-value: 1.94414E-47
score: 152.802
NoneNo IPR availableCDDcd12345RRM2_SECp43_likecoord: 216..295
e-value: 2.66862E-49
score: 157.441
NoneNo IPR availableSUPERFAMILY81995beta-sandwich domain of Sec23/24coord: 60..122
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 124..299

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsat.G14323Cucsat.G14323gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G14323.T7.E1Cucsat.G14323.T7.E1exon
Cucsat.G14323.T7.E2Cucsat.G14323.T7.E2exon
Cucsat.G14323.T7.E3Cucsat.G14323.T7.E3exon
Cucsat.G14323.T7.E4Cucsat.G14323.T7.E4exon
Cucsat.G14323.T7.E5Cucsat.G14323.T7.E5exon
Cucsat.G14323.T7.E6Cucsat.G14323.T7.E6exon
Cucsat.G14323.T7.E7Cucsat.G14323.T7.E7exon
Cucsat.G14323.T7.E8Cucsat.G14323.T7.E8exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G14323.T7.C4Cucsat.G14323.T7.C4CDS
Cucsat.G14323.T7.C3Cucsat.G14323.T7.C3CDS
Cucsat.G14323.T7.C2Cucsat.G14323.T7.C2CDS
Cucsat.G14323.T7.C1Cucsat.G14323.T7.C1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsat.G14323.T7Cucsat.G14323.T7-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003723 RNA binding