Homology
BLAST of Sed0010208 vs. NCBI nr
Match:
XP_022956154.1 (nuclear pore complex protein NUP1-like [Cucurbita moschata])
HSP 1 Score: 1414.4 bits (3660), Expect = 0.0e+00
Identity = 900/1369 (65.74%), Postives = 971/1369 (70.93%), Query Frame = 0
Query: 1 MGNENQEEVAADPPGVLEEKNLSLVPGIESDNTHGVTDLEQMLKEKTFTKFEIDRLTELL 60
MGNEN EEVAAD PG E N P I++DNTHGVTDLEQ+LKEKTFT+FEIDRLTELL
Sbjct: 91 MGNENHEEVAADLPGTQEGTNRDFGPSIKTDNTHGVTDLEQILKEKTFTRFEIDRLTELL 150
Query: 61 KSRVADVPSGVEGRKFEQVPSKPVISYGIHERSPKFPPQDGVSSHIVPTHDMSAKVLNED 120
KSRV DVPSG E RKFEQ PS PVISY I E SPKF QDG+SSH+VPT M A VL+ED
Sbjct: 151 KSRVVDVPSGAEERKFEQAPSTPVISYEIQEGSPKFRAQDGISSHVVPTQVMRANVLDED 210
Query: 121 VASPAQIAKMYMGGRPLKATPLSMASSSQKLGDSFVSGDTSKSSTLSLVPRSPGNFDVNE 180
VASPA+IAK YMG RP K+TPLSMAS S K GDSF S + SKSS L+LVPRSPGNFDV E
Sbjct: 211 VASPAEIAKAYMGSRPPKSTPLSMASHSHKFGDSFASENLSKSSALTLVPRSPGNFDVIE 270
Query: 181 NGFVTPRSRGRSALYSMARTPYSRVSATPSIKNSVATIDAYSRATGSSLSQSALEQGRLL 240
NGFVTPRSRGRSALY+MAR PYS VSAT SIKNSVAT DAY RATGSS SQ A E+GR+L
Sbjct: 271 NGFVTPRSRGRSALYNMARMPYSGVSATHSIKNSVATTDAY-RATGSSSSQLAWERGRVL 330
Query: 241 GSNQGALKCRRSVLDEEMGSVGSIRRIRQKSNLLYPKGLSTPSSFTFIPVRGIGSETARH 300
GS QGALK R SVLD+EMG VG IRR+R KSNLLYP GLS PSS T IPV GIGSE A+
Sbjct: 331 GSKQGALKRRSSVLDDEMGHVGPIRRLRHKSNLLYPTGLSLPSSSTSIPVSGIGSENAQQ 390
Query: 301 FLSSKVHPFSSSAGKTLHPGDTKGSLSKVSADSENDMNPSSSFNQIPLRSSEMASKILEQ 360
F S+KVHPFSSS+GK L+ SLSK SA+SEND+ PSSSF+QIPLRSSEMASKILEQ
Sbjct: 391 FQSTKVHPFSSSSGKGLY----SRSLSKRSAESENDVKPSSSFSQIPLRSSEMASKILEQ 450
Query: 361 LETLTPQKEKSSELKLLSVRSNSPMKLSPSMLHGPALRSLEDVDSSKYLKNVEDIRSNDA 420
LE LTP K+KSS+LKLLSV +NSP KLSPSMLHGPALRSLEDVDSSKYL+NVEDI+SNDA
Sbjct: 451 LEKLTPPKDKSSKLKLLSVTNNSPTKLSPSMLHGPALRSLEDVDSSKYLENVEDIQSNDA 510
Query: 421 RDHTTLDNGKVEERSSLKFKVPNDKSISTACDGASSSGLMKDAVPSSGLQVSFVGPSSQT 480
R+ T+ N KVEE SSLK+K+P +K IS A DG S KD V SS QVSFVG S QT
Sbjct: 511 RELTSQKNNKVEESSSLKYKLPINKEIS-AGDGLGSPVPTKDTVLSSRPQVSFVGASPQT 570
Query: 481 KCSFQMSALEDFEDLDEEGYSNGPVTDIS-----------LAVSKPSDTEAITVLDKPRA 540
KC+FQMSA EDF D+DEEG SNGPVTDIS +A+SKPSDTEAITV DKP+A
Sbjct: 571 KCAFQMSAHEDFVDIDEEGCSNGPVTDISFDRREKMDASLVAMSKPSDTEAITV-DKPQA 630
Query: 541 SVEVKPSTLSEMKKINDQRKSDAPVTTGKSPI-SFATASSPSITANAIVPESTSRPEITV 600
S EVKPST+SE+ KIN QRKSD PVT KSPI SFATAS PSIT NA PEST RPE +
Sbjct: 631 SAEVKPSTVSELNKINGQRKSDVPVTAEKSPIFSFATASPPSITTNAKDPESTLRPEKNI 690
Query: 601 SSEVPKTTIAPLFGFGNKLPSQTESISSAPTFTFGNKVATLANEQNAVPVVASESNVAPT 660
S E PK AP+FGFG+KLPSQ ES SSAPTF FGNK A NEQNAVPV SESNVAP
Sbjct: 691 SPEAPKPANAPIFGFGDKLPSQKESFSSAPTFAFGNKFAPSTNEQNAVPVATSESNVAP- 750
Query: 661 QQTSVPSTFTFGDKTTASIPENAATENGIKNVGLPLKFASPSVNEKESARVDSVSVLKAE 720
K T IP NAATENG KN G P KFASP VNEKESA+V S SV KAE
Sbjct: 751 ------------GKATFPIPANAATENGNKNTGSPFKFASPLVNEKESAKVGSSSVFKAE 810
Query: 721 ISSSSIRSFGVSKEFMSGNKAGDKSSSAGLSVGTFENLF-SSVSTSTPTPSLFSLSSPST 780
+SSSI SFGV KE MS +KAGDKS SAGLSVGT ENLF SSVSTST PSLFS SSPST
Sbjct: 811 SNSSSILSFGVPKESMS-DKAGDKSLSAGLSVGTSENLFSSSVSTSTSAPSLFSFSSPST 870
Query: 781 NSNLNNGSLVPTPSIVTPSIVSFSATSFSKDISNQNSSIKPSLTATPHNSEPAATASLST 840
NSNLNNGSLV TPSI S AT+FS +I+NQN SIKPSLT P NSEPA T SLS
Sbjct: 871 NSNLNNGSLVS-----TPSIFSSPATTFSNNITNQNPSIKPSLTTAPSNSEPATTTSLSM 930
Query: 841 SSPIPSFSAAPIFKFGSPSVPSTSAPALSAPSGVGSVETKTTLETTLGNLSGTPPSDTSA 900
SP+PSFSAAPIFKFGSPSVPS+SAPALSA ETKT ETT GNLSG PPSDTSA
Sbjct: 931 PSPVPSFSAAPIFKFGSPSVPSSSAPALSA------AETKTKQETTFGNLSGIPPSDTSA 990
Query: 901 AKASSTGNSIFQFGAPATADSNKQPVSSTFSQGNGTAFGAPVSPASSGPASSTQSTPVFP 960
AK SSTG S+FQFGA AT DSNK+P +ST + GN FGAPV PA+SG ASSTQSTPV P
Sbjct: 991 AKVSSTGGSVFQFGAAATTDSNKRPENSTSAPGNVPTFGAPVFPANSGVASSTQSTPVLP 1050
Query: 961 FSSSSTSFGLAGNTGLSSGSSLFGSSAPASNLFTSGTTLGLASSSSSASNSVSSGAGTSS 1020
FSSSSTSFGLA NTGLSSGSSLFGSSAPASNLF+SGTT GL +SSSA+NSVSSGAGTSS
Sbjct: 1051 FSSSSTSFGLAANTGLSSGSSLFGSSAPASNLFSSGTTFGLTGTSSSANNSVSSGAGTSS 1110
Query: 1021 SLSNWQSSSTPSFSTGFSSTPTGVFSFGLSSSSTTSNSAPVVFGSSSTGAATAPMFSFTS 1080
S NWQ+SSTPSFSTGFSSTPTG F FGLSSSS SNS+P++FGSS+T A+T MFSFTS
Sbjct: 1111 SFFNWQTSSTPSFSTGFSSTPTGGFPFGLSSSSAASNSSPMLFGSSTTSASTTSMFSFTS 1170
Query: 1081 AASSQPAFGNSTSQPAFGNSSSQPAFGNSSSQPAFGNSSSQPAFGTLSSQPAFGTSSSQP 1140
AASSQPAF N
Sbjct: 1171 AASSQPAFSN-------------------------------------------------- 1230
Query: 1141 AFDTSSSQPAFGTSSSQPAFGTSSSQPAFGTSSSQPAFGSQPAFGSQPAFGSQPSFGTSS 1200
Sbjct: 1231 ------------------------------------------------------------ 1272
Query: 1201 SQPAFGTSSSQPAFGHLSSQPAFGNSQPAFGNSSSQPAFAISNPGFTFGSTPLANNFQAN 1260
SN GFTFGSTP ANN QAN
Sbjct: 1291 -----------------------------------------SNHGFTFGSTPPANNDQAN 1272
Query: 1261 TEDSMAEDGVQAVATPTPMPTFGQQPLTPPPSSGYMFGSTAPSPQAASPFQFGNQQNVPS 1320
EDSMAED VQAV PT PTFGQQPLTPPPSSG+MFGS AP P AASPFQFG+QQN P+
Sbjct: 1351 MEDSMAEDTVQAVTLPT--PTFGQQPLTPPPSSGFMFGSAAPPPVAASPFQFGSQQNAPT 1272
Query: 1321 PQNPSLFQASGS--FNAPSAGGSFSLGAGGGDKANRKYIRVKNSKSRRK 1355
PQNPS F ASGS FNA SAGGSFSLGAGGGDKANRKY++VK SKSR+K
Sbjct: 1411 PQNPSPFHASGSLDFNA-SAGGSFSLGAGGGDKANRKYVKVK-SKSRKK 1272
BLAST of Sed0010208 vs. NCBI nr
Match:
KAG7032922.1 (Nuclear pore complex protein NUP1 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1409.8 bits (3648), Expect = 0.0e+00
Identity = 902/1378 (65.46%), Postives = 972/1378 (70.54%), Query Frame = 0
Query: 1 MGNENQEEVAADPPGVLEEKNLSLVPGIESDNTHGVTDLEQMLKEKTFT---------KF 60
MGNEN EEVAAD PG E N P I++DNTHGVTDLEQ+LKEKTFT KF
Sbjct: 91 MGNENHEEVAADLPGTQEGTNHDFGPSIKTDNTHGVTDLEQILKEKTFTRQVFECLLVKF 150
Query: 61 EIDRLTELLKSRVADVPSGVEGRKFEQVPSKPVISYGIHERSPKFPPQDGVSSHIVPTHD 120
EIDRLTELLKSRV DVPSG E RKFEQ PS PVISY I E SPKF QDG+SSH+VPT
Sbjct: 151 EIDRLTELLKSRVVDVPSGAEERKFEQAPSTPVISYEIQEGSPKFRAQDGISSHVVPTQV 210
Query: 121 MSAKVLNEDVASPAQIAKMYMGGRPLKATPLSMASSSQKLGDSFVSGDTSKSSTLSLVPR 180
M A VL+EDVASPA+IAK YMG RP KATPLSMAS S K GDSF S + SKSS L+LVPR
Sbjct: 211 MRANVLDEDVASPAEIAKAYMGSRPPKATPLSMASHSHKFGDSFASENLSKSSALTLVPR 270
Query: 181 SPGNFDVNENGFVTPRSRGRSALYSMARTPYSRVSATPSIKNSVATIDAYSRATGSSLSQ 240
SPGNFDV ENGFVTPRSRGRSALY+MAR PYS VSAT SIKNSVAT DAY RATGSS SQ
Sbjct: 271 SPGNFDVIENGFVTPRSRGRSALYNMARMPYSGVSATHSIKNSVATTDAY-RATGSSSSQ 330
Query: 241 SALEQGRLLGSNQGALKCRRSVLDEEMGSVGSIRRIRQKSNLLYPKGLSTPSSFTFIPVR 300
A E+GR+LGS QGALK R SVLD+EMG VG IRR+R KSNLLYP GLS PSS T IPV
Sbjct: 331 LAWERGRVLGSKQGALKRRSSVLDDEMGHVGPIRRLRHKSNLLYPTGLSLPSSSTSIPVS 390
Query: 301 GIGSETARHFLSSKVHPFSSSAGKTLHPGDTKGSLSKVSADSENDMNPSSSFNQIPLRSS 360
GIGSE A+ F S+KVHPFSSS+GK L+ SLSK SA+SEND+ PSSSF+QIPLRSS
Sbjct: 391 GIGSENAQQFQSTKVHPFSSSSGKGLY----SRSLSKRSAESENDVKPSSSFSQIPLRSS 450
Query: 361 EMASKILEQLETLTPQKEKSSELKLLSVRSNSPMKLSPSMLHGPALRSLEDVDSSKYLKN 420
EMASKILEQLE LTP K+KSS+LKLLSV +NSP KLSPSMLHGPALRSLEDVDSSKYL+N
Sbjct: 451 EMASKILEQLEKLTPPKDKSSKLKLLSVTNNSPTKLSPSMLHGPALRSLEDVDSSKYLEN 510
Query: 421 VEDIRSNDARDHTTLDNGKVEERSSLKFKVPNDKSISTACDGASSSGLMKDAVPSSGLQV 480
VEDI+SNDAR+ T+ N KVEE SSLK+K+P +K IS A DG S KD V SS QV
Sbjct: 511 VEDIQSNDARELTSQKNNKVEESSSLKYKLPINKEIS-AGDGLGSPVPTKDTVLSSRPQV 570
Query: 481 SFVGPSSQTKCSFQMSALEDFEDLDEEGYSNGPVTDIS-----------LAVSKPSDTEA 540
SFVG S QTKC+FQMSA EDF D+DEEG SNGPVTDIS +A+SKPSDTEA
Sbjct: 571 SFVGASPQTKCAFQMSAHEDFVDIDEEGCSNGPVTDISFDRREKMDGSLVAMSKPSDTEA 630
Query: 541 ITVLDKPRASVEVKPSTLSEMKKINDQRKSDAPVTTGKSPI-SFATASSPSITANAIVPE 600
ITV DKP+AS EVKPST+SE+ KIN QRKSD PVT KSPI SFATAS PSIT NA PE
Sbjct: 631 ITV-DKPQASAEVKPSTVSELNKINGQRKSDVPVTAVKSPIFSFATASPPSITTNAKDPE 690
Query: 601 STSRPEITVSSEVPKTTIAPLFGFGNKLPSQTESISSAPTFTFGNKVATLANEQNAVPVV 660
ST RPE +S E PK AP+FGFG+KLPSQ ES SSAPTF FGNK A NEQNAVPV
Sbjct: 691 STLRPEKNISPEAPKPANAPIFGFGDKLPSQKESFSSAPTFAFGNKFAPSTNEQNAVPVA 750
Query: 661 ASESNVAPTQQTSVPSTFTFGDKTTASIPENAATENGIKNVGLPLKFASPSVNEKESARV 720
SESNVAP K T IP NAATENG KN G P KFASP VNEKESA+
Sbjct: 751 TSESNVAP-------------GKATFPIPANAATENGNKNTGSPFKFASPLVNEKESAKG 810
Query: 721 DSVSVLKAEISSSSIRSFGVSKEFMSGNKAGDKSSSAGLSVGTFENLF-SSVSTSTPTPS 780
S SV KAE +SSSI SFGV KE MS +KAGDKSSSAGLSVGT ENLF SSVSTST PS
Sbjct: 811 GSSSVSKAESNSSSILSFGVPKESMS-DKAGDKSSSAGLSVGTSENLFSSSVSTSTSAPS 870
Query: 781 LFSLSSPSTNSNLNNGSLVPTPSIVTPSIVSFSATSFSKDISNQNSSIKPSLTATPHNSE 840
LFS SSPSTNSNLNNGSLV TPSI S AT+FS +I+NQN SIKPSLTA P N E
Sbjct: 871 LFSFSSPSTNSNLNNGSLVS-----TPSIFSSPATTFSNNITNQNPSIKPSLTAAPSNGE 930
Query: 841 PAATASLSTSSPIPSFSAAPIFKFGSPSVPSTSAPALSAPSGVGSVETKTTLETTLGNLS 900
PA T SLS SP+PSFSAAPIFKFGSPSVPS+SAPALSA ETKT ETT GNLS
Sbjct: 931 PATTTSLSMPSPVPSFSAAPIFKFGSPSVPSSSAPALSA------AETKTKQETTFGNLS 990
Query: 901 GTPPSDTSAAKASSTGNSIFQFGAPATADSNKQPVSSTFSQGNGTAFGAPVSPASSGPAS 960
G PPSDTSAAK SSTG S+FQFGA AT DSNK+P +ST + GN FGAPV PA+SG AS
Sbjct: 991 GIPPSDTSAAKVSSTGGSVFQFGAAATTDSNKRPENSTSASGNVPTFGAPVFPANSGVAS 1050
Query: 961 STQSTPVFPFSSSSTSFGLAGNTGLSSGSSLFGSSAPASNLFTSGTTLGLASSSSSASNS 1020
STQSTPV PFSSSSTSFGLA NTGLSSGSSLFGSSAPASNLF+SGTT GL +SSSA+NS
Sbjct: 1051 STQSTPVLPFSSSSTSFGLAANTGLSSGSSLFGSSAPASNLFSSGTTFGLTGTSSSANNS 1110
Query: 1021 VSSGAGTSSSLSNWQSSSTPSFSTGFSSTPTGVFSFGLSSSSTTSNSAPVVFGSSSTGAA 1080
VSSGAGTSSS NWQ+SSTPSFSTGF STPTG F FGLSSSS SNS+P++FGSS+T A+
Sbjct: 1111 VSSGAGTSSSFFNWQTSSTPSFSTGFGSTPTGGFPFGLSSSSAASNSSPMLFGSSTTSAS 1170
Query: 1081 TAPMFSFTSAASSQPAFGNSTSQPAFGNSSSQPAFGNSSSQPAFGNSSSQPAFGTLSSQP 1140
T MFSFTSAASSQPAFGN
Sbjct: 1171 TTSMFSFTSAASSQPAFGN----------------------------------------- 1230
Query: 1141 AFGTSSSQPAFDTSSSQPAFGTSSSQPAFGTSSSQPAFGTSSSQPAFGSQPAFGSQPAFG 1200
Sbjct: 1231 ------------------------------------------------------------ 1281
Query: 1201 SQPSFGTSSSQPAFGTSSSQPAFGHLSSQPAFGNSQPAFGNSSSQPAFAISNPGFTFGST 1260
SN GFTFGST
Sbjct: 1291 --------------------------------------------------SNHGFTFGST 1281
Query: 1261 PLANNFQANTEDSMAEDGVQAVATPTPMPTFGQQPLTPPPSSGYMFGSTAPSPQAASPFQ 1320
P ANN QAN EDSMAED +QAV PT PTFGQQPLTPPPSSG+MFGS AP P AASPFQ
Sbjct: 1351 PPANNDQANMEDSMAEDTIQAVTLPT--PTFGQQPLTPPPSSGFMFGSAAPPPVAASPFQ 1281
Query: 1321 FGNQQNVPSPQNPSLFQASGS--FNAPSAGGSFSLGAGGGDKANRKYIRVKNSKSRRK 1355
FG+QQN P+PQNPS FQASGS FNA SAGGSFSLGAGGGDKANRKY++VK SKSR+K
Sbjct: 1411 FGSQQNAPAPQNPSPFQASGSLDFNA-SAGGSFSLGAGGGDKANRKYVKVK-SKSRKK 1281
BLAST of Sed0010208 vs. NCBI nr
Match:
XP_023527371.1 (nuclear pore complex protein NUP1-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1403.3 bits (3631), Expect = 0.0e+00
Identity = 896/1370 (65.40%), Postives = 970/1370 (70.80%), Query Frame = 0
Query: 1 MGNENQEEVAADPPGVLEEKNLSLVPGIESDNTHGVTDLEQMLKEKTFTKFEIDRLTELL 60
MGNEN EEVAAD PG E N P I++DNTHGVTDLEQ+LKEKTFT+FEIDRLTELL
Sbjct: 91 MGNENHEEVAADLPGTQEGTNRDFGPSIKTDNTHGVTDLEQILKEKTFTRFEIDRLTELL 150
Query: 61 KSRVADVPSGVEGRKFEQVPSKPVISYGIHERSPKFPPQDGVSSHIVPTHDMSAKVLNED 120
KSRV DVPSGVE RKFEQ PS PVISY I E SPKF QDG+SSH+VPT M A VL+ED
Sbjct: 151 KSRVVDVPSGVEERKFEQAPSTPVISYEIQEGSPKFRAQDGISSHVVPTQVMRANVLDED 210
Query: 121 VASPAQIAKMYMGGRPLKATPLSMASSSQKLGDSFVSGDTSKSSTLSLVPRSPGNFDVNE 180
VASPA+IAK YMG RP KATPLSMAS S K GDSF S + SKSS L+LVPRSPGNFDV E
Sbjct: 211 VASPAEIAKAYMGSRPPKATPLSMASHSHKFGDSFASENLSKSSALTLVPRSPGNFDVIE 270
Query: 181 NGFVTPRSRGRSALYSMARTPYSRVSATPSIKNSVATIDAYSRATGSSLSQSALEQGRLL 240
NGFVTPRSRGRSALY+MAR PYS VSAT SIKNSVAT DAY RATGSS SQ A E+GR+L
Sbjct: 271 NGFVTPRSRGRSALYNMARMPYSGVSATHSIKNSVATTDAY-RATGSSSSQLAWERGRVL 330
Query: 241 GSNQGALKCRRSVLDEEMGSVGSIRRIRQKSNLLYPKGLSTPSSFTFIPVRGIGSETARH 300
GS QGALK R SVLD+EMG VG IRR+R KSNLLYP GLS PSS T IPV GIGSE A+
Sbjct: 331 GSKQGALKRRSSVLDDEMGHVGPIRRLRHKSNLLYPTGLSLPSSSTSIPVSGIGSENAQQ 390
Query: 301 FLSSKVHPFSSSAGKTLHPGDTKGSLSKVSADSENDMNPSSSFNQIPLRSSEMASKILEQ 360
F S+KVHPFSSS+GK L+ SLSK SA+SEND+ PSSSF+QIPLRSSEMASKILEQ
Sbjct: 391 FQSTKVHPFSSSSGKALY----SRSLSKRSAESENDVKPSSSFSQIPLRSSEMASKILEQ 450
Query: 361 LETLTPQKEKSSELKLLSVRSNSPMKLSPSMLHGPALRSLEDVDSSKYLKNVEDIRSNDA 420
LE LTP K++SS+LKLLSV +NSP KLSPSMLHGPALRSLEDVDSSKYL+NVEDI+SNDA
Sbjct: 451 LEKLTPPKDRSSKLKLLSVTNNSPTKLSPSMLHGPALRSLEDVDSSKYLENVEDIQSNDA 510
Query: 421 RDHTTLDNGKVEERSSLKFKVPNDKSISTACDGASSSGLMKDAVPSSGLQVSFVGPSSQT 480
R+ T+ N KVEE SSLK+K+P DK+IS A DG S KD V SS QV+FVG S QT
Sbjct: 511 RELTSQKNNKVEESSSLKYKLPIDKAIS-AGDGLGSLVPTKDTVLSSRPQVAFVGASPQT 570
Query: 481 KCSFQMSALEDFEDLDEEGYSNGPVTDISL-----------AVSKPSDTEAITVLDKPRA 540
KC+FQMSA EDF D+DEEG SNGPVTDIS A+SKP+DTEAITV DKP+A
Sbjct: 571 KCAFQMSAHEDFVDIDEEGCSNGPVTDISFDRREKMDGSLAAMSKPNDTEAITV-DKPQA 630
Query: 541 SVEVKPSTLSEMKKINDQRKSDAPVTTGKSPI-SFATASSPSITANAIVPESTSRPEITV 600
S EVKPST SE+ K+N QRKSD PV KSPI SFATAS PSI ANA PEST RPE +
Sbjct: 631 SAEVKPSTASELNKMNGQRKSDVPVIAEKSPIFSFATASPPSIIANAKDPESTLRPEKNI 690
Query: 601 SSEVPKTTIAPLFGFGNKLPSQTESISSAPTFTFGNKVATLANEQNAVPVVASESNVAPT 660
S E PK AP+FGFG+KLPSQ ES SSAPTF FGNK A NEQNAVPV SESNVAP
Sbjct: 691 SPEAPKPANAPIFGFGDKLPSQKESFSSAPTFAFGNKFAPSTNEQNAVPVANSESNVAP- 750
Query: 661 QQTSVPSTFTFGDKTTASIPENAATENGIKNVGLPLKFASPSVNEKESARVDSVSVLKAE 720
K T IP NAATENG KN G P KFASP VNEKE A+V S SV KAE
Sbjct: 751 ------------GKATFPIPANAATENGNKNTGSPFKFASPLVNEKERAKVGSSSVFKAE 810
Query: 721 ISSSSIRSFGVSKEFMSGNKAGDKSSSAGLSVGTFENLF-SSVSTSTPTPSLFSLSSPST 780
+SSSI SFGV KE MS +KAGDKSSSAGLSVGT ENLF SSVSTST +PSLFS SSPST
Sbjct: 811 SNSSSILSFGVPKESMS-DKAGDKSSSAGLSVGTSENLFSSSVSTSTSSPSLFSFSSPST 870
Query: 781 NSNLNNGSLVPTPSIVTPSIVSFSATSFSKDISNQNSSIKPSLTATPHNSEPA-ATASLS 840
NSNLNNGSLV TPSI S AT+FS +I+NQN SIKPSLT P NSEPA T SLS
Sbjct: 871 NSNLNNGSLVS-----TPSIFSSPATTFSNNITNQNPSIKPSLTTAPSNSEPATTTTSLS 930
Query: 841 TSSPIPSFSAAPIFKFGSPSVPSTSAPALSAPSGVGSVETKTTLETTLGNLSGTPPSDTS 900
SP+PSFSAAPIFKFGSPSVPS+SAPALSA ETKT ETT GNLSG PPSDTS
Sbjct: 931 MPSPVPSFSAAPIFKFGSPSVPSSSAPALSA------AETKTKQETTFGNLSGIPPSDTS 990
Query: 901 AAKASSTGNSIFQFGAPATADSNKQPVSSTFSQGNGTAFGAPVSPASSGPASSTQSTPVF 960
AAK SSTG S+FQFGA AT DSNK+P +ST + GN FGAPV PA+SG ASSTQSTPV
Sbjct: 991 AAKVSSTGGSVFQFGAAATTDSNKRPENSTSAPGNVPTFGAPVFPANSGVASSTQSTPVL 1050
Query: 961 PFSSSSTSFGLAGNTGLSSGSSLFGSSAPASNLFTSGTTLGLASSSSSASNSVSSGAGTS 1020
PFSSSSTSFGLA NTGLSSGS LFGSSAPASNLF+ GTT GL ++SSSA+NSVSSGAGTS
Sbjct: 1051 PFSSSSTSFGLAANTGLSSGSYLFGSSAPASNLFSPGTTFGLTATSSSANNSVSSGAGTS 1110
Query: 1021 SSLSNWQSSSTPSFSTGFSSTPTGVFSFGLSSSSTTSNSAPVVFGSSSTGAATAPMFSFT 1080
SS NWQ+SSTPSFSTGFSSTPTG F FGLSSSS SNS+P++FGSS+T A+T MFSFT
Sbjct: 1111 SSFFNWQTSSTPSFSTGFSSTPTGGFPFGLSSSSAASNSSPMLFGSSTTSASTTSMFSFT 1170
Query: 1081 SAASSQPAFGNSTSQPAFGNSSSQPAFGNSSSQPAFGNSSSQPAFGTLSSQPAFGTSSSQ 1140
SA SSQPAFGN
Sbjct: 1171 SAVSSQPAFGN------------------------------------------------- 1230
Query: 1141 PAFDTSSSQPAFGTSSSQPAFGTSSSQPAFGTSSSQPAFGSQPAFGSQPAFGSQPSFGTS 1200
Sbjct: 1231 ------------------------------------------------------------ 1273
Query: 1201 SSQPAFGTSSSQPAFGHLSSQPAFGNSQPAFGNSSSQPAFAISNPGFTFGSTPLANNFQA 1260
SN GFTFGSTP ANN QA
Sbjct: 1291 ------------------------------------------SNHGFTFGSTPPANNDQA 1273
Query: 1261 NTEDSMAEDGVQAVATPTPMPTFGQQPLTPPPSSGYMFGSTAPSPQAASPFQFGNQQNVP 1320
N EDSMAED VQAV PT PTFGQQPLTPPPSSG+MFGS AP P AASPFQFG+QQN P
Sbjct: 1351 NMEDSMAEDTVQAVTLPT--PTFGQQPLTPPPSSGFMFGSAAPPPVAASPFQFGSQQNAP 1273
Query: 1321 SPQNPSLFQASGS--FNAPSAGGSFSLGAGGGDKANRKYIRVKNSKSRRK 1355
+PQNPS F ASGS FNA SAGGSFSLGAGGGDKANRKY++VK SKSR+K
Sbjct: 1411 TPQNPSPFHASGSLDFNA-SAGGSFSLGAGGGDKANRKYVKVK-SKSRKK 1273
BLAST of Sed0010208 vs. NCBI nr
Match:
KAG6602242.1 (Nuclear pore complex protein NUP1, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1402.1 bits (3628), Expect = 0.0e+00
Identity = 897/1369 (65.52%), Postives = 969/1369 (70.78%), Query Frame = 0
Query: 1 MGNENQEEVAADPPGVLEEKNLSLVPGIESDNTHGVTDLEQMLKEKTFTKFEIDRLTELL 60
MGNEN EEVAAD PG E N P I++DNTHGVTDLEQ+LKEKTFT+FEIDRLTELL
Sbjct: 91 MGNENHEEVAADLPGTQEGTNHDFGPSIKTDNTHGVTDLEQILKEKTFTRFEIDRLTELL 150
Query: 61 KSRVADVPSGVEGRKFEQVPSKPVISYGIHERSPKFPPQDGVSSHIVPTHDMSAKVLNED 120
KSRV DVPSG E RKFEQ PS PVISY I E SPKF QDG+SSH+VPT M A VL+ED
Sbjct: 151 KSRVVDVPSGAEERKFEQAPSTPVISYEIQEGSPKFRAQDGISSHVVPTQVMRANVLDED 210
Query: 121 VASPAQIAKMYMGGRPLKATPLSMASSSQKLGDSFVSGDTSKSSTLSLVPRSPGNFDVNE 180
VASPA+IAK YMG RP KATPLSMAS S K GDSF S + SKSS L+LVPRSPGNFDV E
Sbjct: 211 VASPAEIAKAYMGSRPPKATPLSMASHSHKFGDSFASENLSKSSALTLVPRSPGNFDVIE 270
Query: 181 NGFVTPRSRGRSALYSMARTPYSRVSATPSIKNSVATIDAYSRATGSSLSQSALEQGRLL 240
NGFVTPRSRGRSALY+MAR PYS VSAT SIKNSVAT DAY RATGSS SQ A E+ R+L
Sbjct: 271 NGFVTPRSRGRSALYNMARMPYSGVSATHSIKNSVATTDAY-RATGSSSSQFAWERVRVL 330
Query: 241 GSNQGALKCRRSVLDEEMGSVGSIRRIRQKSNLLYPKGLSTPSSFTFIPVRGIGSETARH 300
GS QGALK R SVLD+EMG VG IRR+R KSNLLYP GLS PSS T IPV GIGSE A+
Sbjct: 331 GSKQGALKRRSSVLDDEMGHVGPIRRLRHKSNLLYPTGLSLPSSSTSIPVSGIGSENAQQ 390
Query: 301 FLSSKVHPFSSSAGKTLHPGDTKGSLSKVSADSENDMNPSSSFNQIPLRSSEMASKILEQ 360
F S+KVHPFSSS+GK L+ SLSK SA+SEND+ PSSSF+QIPLRSSEMASKILEQ
Sbjct: 391 FQSTKVHPFSSSSGKGLY----SRSLSKRSAESENDVKPSSSFSQIPLRSSEMASKILEQ 450
Query: 361 LETLTPQKEKSSELKLLSVRSNSPMKLSPSMLHGPALRSLEDVDSSKYLKNVEDIRSNDA 420
LE LTP K+KSS+LKLLSV +NSP KLSPSMLHGPALRSLEDVDSSKYL+NVEDI+SNDA
Sbjct: 451 LEKLTPPKDKSSKLKLLSVTNNSPTKLSPSMLHGPALRSLEDVDSSKYLENVEDIQSNDA 510
Query: 421 RDHTTLDNGKVEERSSLKFKVPNDKSISTACDGASSSGLMKDAVPSSGLQVSFVGPSSQT 480
R+ T+ N KVEE SSLK+K+P +K IS A DG S KD V SS QVSFVG S QT
Sbjct: 511 RELTSQKNNKVEESSSLKYKLPINKEIS-AGDGLGSPVPTKDTVLSSRPQVSFVGASPQT 570
Query: 481 KCSFQMSALEDFEDLDEEGYSNGPVTDIS-----------LAVSKPSDTEAITVLDKPRA 540
KC+FQMSA EDF D+DEEG SNGPVTDIS +A+SKPSDTEAITV DKP+A
Sbjct: 571 KCAFQMSAHEDFVDIDEEGCSNGPVTDISFDRREKMDGSLVAMSKPSDTEAITV-DKPQA 630
Query: 541 SVEVKPSTLSEMKKINDQRKSDAPVTTGKSPI-SFATASSPSITANAIVPESTSRPEITV 600
S EVKPST+SE+ KIN QRKSD PVT KSPI SFATAS PSIT NA PEST RPE +
Sbjct: 631 SAEVKPSTVSELNKINGQRKSDVPVTAVKSPIFSFATASPPSITTNAKDPESTLRPEKNI 690
Query: 601 SSEVPKTTIAPLFGFGNKLPSQTESISSAPTFTFGNKVATLANEQNAVPVVASESNVAPT 660
S E PK AP+FGFG+KLPSQ ES SSAPTF FGNK A NEQN VPV SESNVAP
Sbjct: 691 SPEAPKPANAPIFGFGDKLPSQKESFSSAPTFAFGNKFAPSTNEQNDVPVATSESNVAP- 750
Query: 661 QQTSVPSTFTFGDKTTASIPENAATENGIKNVGLPLKFASPSVNEKESARVDSVSVLKAE 720
K T IP NAATENG KN G P KFASP VNEKESA+V S SV KAE
Sbjct: 751 ------------GKATFPIPANAATENGNKNTGSPFKFASPLVNEKESAKVGSSSVSKAE 810
Query: 721 ISSSSIRSFGVSKEFMSGNKAGDKSSSAGLSVGTFENLF-SSVSTSTPTPSLFSLSSPST 780
+SSSI SFGV KE MS +KAGDKSSSAGLSVGT ENLF SSVSTST PSLFS SSPST
Sbjct: 811 SNSSSILSFGVPKESMS-DKAGDKSSSAGLSVGTSENLFSSSVSTSTSAPSLFSFSSPST 870
Query: 781 NSNLNNGSLVPTPSIVTPSIVSFSATSFSKDISNQNSSIKPSLTATPHNSEPAATASLST 840
NSNLNNGSLV TPSI S AT+FS +I+ QN SIKPSLTA P N EPA T SLS
Sbjct: 871 NSNLNNGSLVS-----TPSIFSSPATTFSNNIT-QNPSIKPSLTAAPSNGEPATTTSLSM 930
Query: 841 SSPIPSFSAAPIFKFGSPSVPSTSAPALSAPSGVGSVETKTTLETTLGNLSGTPPSDTSA 900
SP+PSFSAAPIFKFGSPSVPS+SAPALSA ETKT ETT GNLSG PPSDTSA
Sbjct: 931 PSPVPSFSAAPIFKFGSPSVPSSSAPALSA------AETKTKQETTFGNLSGIPPSDTSA 990
Query: 901 AKASSTGNSIFQFGAPATADSNKQPVSSTFSQGNGTAFGAPVSPASSGPASSTQSTPVFP 960
AK SSTG S+FQFGA AT DSNK+P +ST + GN FGAPV PA+SG ASSTQSTPV P
Sbjct: 991 AKVSSTGGSVFQFGAAATTDSNKRPENSTSASGNVPTFGAPVFPANSGVASSTQSTPVLP 1050
Query: 961 FSSSSTSFGLAGNTGLSSGSSLFGSSAPASNLFTSGTTLGLASSSSSASNSVSSGAGTSS 1020
FSSSSTSFGLA NT LSSGSSLFGSSAPASNLF+SGTT GL ++SSA+NSVSSGAGTSS
Sbjct: 1051 FSSSSTSFGLAANTVLSSGSSLFGSSAPASNLFSSGTTFGLTGTNSSANNSVSSGAGTSS 1110
Query: 1021 SLSNWQSSSTPSFSTGFSSTPTGVFSFGLSSSSTTSNSAPVVFGSSSTGAATAPMFSFTS 1080
S NWQ+SSTPSFSTGF STPTG F FGLSSSS SNS+P++FGSS+T A+T MFSFTS
Sbjct: 1111 SFFNWQTSSTPSFSTGFGSTPTGGFPFGLSSSSAASNSSPMLFGSSTTSASTTSMFSFTS 1170
Query: 1081 AASSQPAFGNSTSQPAFGNSSSQPAFGNSSSQPAFGNSSSQPAFGTLSSQPAFGTSSSQP 1140
AASSQPAFGN
Sbjct: 1171 AASSQPAFGN-------------------------------------------------- 1230
Query: 1141 AFDTSSSQPAFGTSSSQPAFGTSSSQPAFGTSSSQPAFGSQPAFGSQPAFGSQPSFGTSS 1200
Sbjct: 1231 ------------------------------------------------------------ 1271
Query: 1201 SQPAFGTSSSQPAFGHLSSQPAFGNSQPAFGNSSSQPAFAISNPGFTFGSTPLANNFQAN 1260
SN GFTFGSTP ANN QAN
Sbjct: 1291 -----------------------------------------SNHGFTFGSTPPANNDQAN 1271
Query: 1261 TEDSMAEDGVQAVATPTPMPTFGQQPLTPPPSSGYMFGSTAPSPQAASPFQFGNQQNVPS 1320
EDSMAED +QAV PT PTFGQQPLTPPPSSG+MFGS AP P AASPFQFG+QQN P+
Sbjct: 1351 MEDSMAEDTIQAVTLPT--PTFGQQPLTPPPSSGFMFGSAAPPPVAASPFQFGSQQNAPA 1271
Query: 1321 PQNPSLFQASGS--FNAPSAGGSFSLGAGGGDKANRKYIRVKNSKSRRK 1355
PQNPS FQASGS FNA SAGGSFSLGAGGGDKANRKY++VK SKSR+K
Sbjct: 1411 PQNPSPFQASGSLDFNA-SAGGSFSLGAGGGDKANRKYVKVK-SKSRKK 1271
BLAST of Sed0010208 vs. NCBI nr
Match:
XP_038884354.1 (nuclear pore complex protein NUP1-like isoform X2 [Benincasa hispida])
HSP 1 Score: 1398.6 bits (3619), Expect = 0.0e+00
Identity = 902/1377 (65.50%), Postives = 982/1377 (71.31%), Query Frame = 0
Query: 1 MGNENQEEVAADPPGVLEEKNLSLVPGIESDNTHGVTDLEQMLKEKTFTKFEIDRLTELL 60
M N NQEEVAADPP E N+ VP I S+NTHGV+DLE++LKEKTFT+FEIDRLTELL
Sbjct: 91 MENRNQEEVAADPPVTQEGTNVDFVPSINSNNTHGVSDLEKILKEKTFTRFEIDRLTELL 150
Query: 61 KSRVADVPSGVEGRKFEQVPSKPVISYGIHERSPKFP--PQDGVSSHIVPTHDMSAKVLN 120
KSRVADVPSGVE K EQVPS PVISYG E PKFP QDGVS H+V TH +SA VL+
Sbjct: 151 KSRVADVPSGVESGKLEQVPSTPVISYGKQEGCPKFPAQSQDGVSPHMVSTHVVSANVLD 210
Query: 121 EDVASPAQIAKMYMGGRPLKATPLSMASSSQKLGDSFVSGDTSKSSTLSLVPRSPGNFDV 180
EDVASPA+IAK YMG RP KATPLSMAS SQK GD F G+ SKS TLSL+PRSPGNFDV
Sbjct: 211 EDVASPAEIAKAYMGSRPPKATPLSMASHSQKFGDGFSLGNPSKSPTLSLMPRSPGNFDV 270
Query: 181 NENGFVTPRSRGRSALYSMARTPYSRVSATPSIKNSVATIDAYSRATGSSLSQSALEQGR 240
ENGFVTPRSRGRSALYSMAR PYSRV ATPSIKNSVAT DAY RAT SS SQSA QGR
Sbjct: 271 -ENGFVTPRSRGRSALYSMARMPYSRVRATPSIKNSVATTDAY-RATSSS-SQSAWGQGR 330
Query: 241 LLGSNQGALKCRRSVLDEEMGSVGSIRRIRQKSNLLYPKGLSTPSSFTFIPVRGIGSETA 300
LLGS QGALK R SVLD+EMGSVG IRRIR KSN L+PKGLS PSS T IPV GIGSET+
Sbjct: 331 LLGSEQGALKRRNSVLDDEMGSVGPIRRIRHKSNHLFPKGLSLPSSSTSIPVSGIGSETS 390
Query: 301 RHFLSSKVHPFSSSAGKTLHPGDTKGSLSKVSADSENDMNPSSSFNQIPLRSSEMASKIL 360
+H S+KVHPFSS+ GK L+ +TK +LSK+SA+SENDM PSSSF QIPLRSSEMASKIL
Sbjct: 391 QHLQSTKVHPFSSTGGKGLYSSETKRNLSKMSAESENDMIPSSSFPQIPLRSSEMASKIL 450
Query: 361 EQLETLTPQKEKSSELKLLSVRSNSPMKLSPSMLHGPALRSLEDVDSSKYLKNVEDIRSN 420
EQL+ LTP KEKSSELKLLSVR+NSP KLSPSMLHGPALRSLEDVDS+KYL+NVE IRSN
Sbjct: 451 EQLDKLTPPKEKSSELKLLSVRNNSPSKLSPSMLHGPALRSLEDVDSAKYLENVEGIRSN 510
Query: 421 DARDHTTLDNGKVEERSSLKFKVPNDKSISTACDGASSSGLMKDAVPSSGLQVSFVGPSS 480
DA D T+ N K EE S LKFKVPNDKSIST +G SS + K+ V SG QVSFVGPS
Sbjct: 511 DACDLTSKKNDKFEESSPLKFKVPNDKSISTG-NGVGSS-VPKETVSGSGQQVSFVGPSL 570
Query: 481 QTKCSFQMSALEDFEDLDEEGYSNGPVTDISL----------AVSKPSDTEAITVLDKPR 540
QTKC+FQMSA EDF D+DEEGYSNGPV DIS+ AVSKP++TEAITV DKP+
Sbjct: 571 QTKCAFQMSAHEDFVDMDEEGYSNGPVADISIERQEKVNSLVAVSKPNNTEAITV-DKPQ 630
Query: 541 ASVEVKPSTLSEMKKINDQRKSDAPVTTGKSPI-SFATASSPSITANAIVPESTSRPEIT 600
AS+E KP T+S M KINDQ KSD PVTT KSPI SF T SSPSITAN I PES RPE
Sbjct: 631 ASIEAKPPTVSAMNKINDQGKSDVPVTTEKSPIFSFPTTSSPSITANVIGPESNMRPEKI 690
Query: 601 VSSEVPKTTIAPLFGFGNKLPSQTESISSAPTFTFGNKVATLANEQNAVPVVASESNVAP 660
SSEVPK P+FGFG K PSQ E++S APTF F NK+ T NEQNA+PVV SE NV P
Sbjct: 691 ASSEVPKAATTPIFGFGEKFPSQKEAVSFAPTFAFVNKITTSTNEQNAIPVVTSEGNVQP 750
Query: 661 TQQTSVPSTFTFGDKTTASIPENAATENGIKNVGLPLKFASPSVNEKESARV-DSVSVLK 720
TQQ S P+TF FGDK T IP NAATENG KN G PL FASP VNEKE A+ S SV K
Sbjct: 751 TQQASAPTTFKFGDKATFPIPANAATENGNKNEGSPL-FASPLVNEKEGAKEGGSASVFK 810
Query: 721 AEISSSSIRSFGVSKEFMSGNKAGDKSSSAGLSVGTFENLFS---SVSTSTPTPSLFSLS 780
AE SSSSI SFGV KE MS KAGDKSSSAG +VGT +LFS S S STPT LFS S
Sbjct: 811 AESSSSSIPSFGVPKESMS-EKAGDKSSSAGFAVGTSGSLFSSSVSTSISTPTSGLFSFS 870
Query: 781 SPSTNSNLNNGSLV-PTPSIVTPSIVSFSATSFSKDISNQNSSIKPSLTATPHNSEPAAT 840
SPSTNSNLNNGSLV TPS TP AT+FS +I+NQNSSIKPS A NSEP T
Sbjct: 871 SPSTNSNLNNGSLVSTTPSFPTP------ATTFSNNITNQNSSIKPSFNAAASNSEPVTT 930
Query: 841 ASLSTSSPIPSFSAAPIFKFGSPSVPSTSAPALSAPSGVGSVETKTTLETTLGNLSGTPP 900
SL TSS +PSFSAAPI KFGS SVPSTSAPALSAPSGVGS+E+KT ETT GNLSG PP
Sbjct: 931 TSLPTSSLMPSFSAAPISKFGSSSVPSTSAPALSAPSGVGSIESKTKQETTFGNLSGIPP 990
Query: 901 SDTSAAKASSTGNSIFQFGAPAT-ADSNKQPVSSTFSQGNGTAFGAPVSPASSGPASSTQ 960
SD SA K SSTG+S+FQFGA +T +DSNK+P +STF+ N FGA SP SSG ASSTQ
Sbjct: 991 SDLSAVKVSSTGSSVFQFGAASTPSDSNKRPANSTFTPSNVPTFGASFSPVSSGLASSTQ 1050
Query: 961 STPVFPFSSSSTSFGLAGNTGLSSGSSLFGSSAPASNLFTSGTTLGLASSSSSASNSVSS 1020
STPV F+SSSTSFGL GNTGL+SGSSLFGSSAPASNLF SG T GLASSSSS +NSVSS
Sbjct: 1051 STPVLQFNSSSTSFGLTGNTGLASGSSLFGSSAPASNLFASGPTFGLASSSSSVNNSVSS 1110
Query: 1021 GAGTSSSLSNWQSSSTPSFSTGFSSTPTGVFSFGLSSSSTTSNSAPVVFGSSSTGAATAP 1080
AGTSSS NWQ SSTPSFSTGFSSTPTG FSFGLSSSS SNSAPV+FGSSSTG+ T
Sbjct: 1111 SAGTSSSFFNWQPSSTPSFSTGFSSTPTGGFSFGLSSSSAASNSAPVLFGSSSTGSLTPS 1170
Query: 1081 MFSFTSAASSQPAFGNSTSQPAFGNSSSQPAFGNSSSQPAFGNSSSQPAFGTLSSQPAFG 1140
MFSFTSAA++ +TSQPAFGN
Sbjct: 1171 MFSFTSAATA------TTSQPAFGN----------------------------------- 1230
Query: 1141 TSSSQPAFDTSSSQPAFGTSSSQPAFGTSSSQPAFGTSSSQPAFGSQPAFGSQPAFGSQP 1200
Sbjct: 1231 ------------------------------------------------------------ 1290
Query: 1201 SFGTSSSQPAFGTSSSQPAFGHLSSQPAFGNSQPAFGNSSSQPAFAISNPGFTFGSTPLA 1260
SN GFTFGSTP A
Sbjct: 1291 -----------------------------------------------SNHGFTFGSTPPA 1300
Query: 1261 NNFQANTEDSMAEDGVQAVATPTPMPTFGQQPLTPPPSSGYMFGSTAPSPQAASPFQF-G 1320
NN QAN EDSMAED VQ V +PMP+FGQQPLTPPPSSG++FGSTAP P ASPFQF G
Sbjct: 1351 NNDQANMEDSMAEDTVQTVT--SPMPSFGQQPLTPPPSSGFVFGSTAP-PLGASPFQFGG 1300
Query: 1321 NQQNVPSPQ-NPSLFQASGS--FNAPSAGGSFSLGAGGGDKANRKYIRVKNSKSRRK 1355
+QQNVP+PQ NPS FQASGS FNA SAGGSFSLGAGGGDK+NRK+++VK SKSR+K
Sbjct: 1411 SQQNVPTPQNNPSPFQASGSLDFNA-SAGGSFSLGAGGGDKSNRKFVKVK-SKSRKK 1300
BLAST of Sed0010208 vs. ExPASy Swiss-Prot
Match:
Q9CAF4 (Nuclear pore complex protein NUP1 OS=Arabidopsis thaliana OX=3702 GN=NUP1 PE=1 SV=1)
HSP 1 Score: 238.4 bits (607), Expect = 4.7e-61
Identity = 398/1258 (31.64%), Postives = 582/1258 (46.26%), Query Frame = 0
Query: 17 LEEKNLSLVPGIESDNTHGVTDLEQMLKEKTFTKFEIDRLTELLKSRVADVPSGVEGRKF 76
+E+ N S+ P + G TDLE++L+ KTFT+ E+DRLT LL+S+ AD + E ++
Sbjct: 131 MEDTNASVDPPKD-----GFTDLEKILQGKTFTRSEVDRLTTLLRSKAADSSTMNEEQRN 190
Query: 77 EQVPSKPVISYGIHERSPKFPPQDGVSSHIVPTHDMSAKVLNEDVASPAQIAKMYMGGRP 136
E V HER + P +G + +V T S + L+E +ASPAQ+AK YMG RP
Sbjct: 191 E--VGMVVRHPPSHERD-RTHPDNGSMNTLVSTPPGSLRTLDECIASPAQLAKAYMGSRP 250
Query: 137 LKATPLSMASSSQK-LGDSFVSGDT---SKSSTLSLVPRSPGNFDVNENGFVTPRSRGRS 196
+ TP + Q DS T KS T+SLV + G + ENGFVTPRSRGRS
Sbjct: 251 SEVTPSMLGLRGQAGREDSVFLNRTPFPQKSPTMSLVTKPSGQRPL-ENGFVTPRSRGRS 310
Query: 197 ALYSMARTPYSRVSATPSIKNSVATIDAYSRATGSSLSQSALEQGRLLGSNQG---ALKC 256
A+YSMARTPYSR ++ I + S S E+ GS QG LK
Sbjct: 311 AVYSMARTPYSRPQSSVKIGSLF------------QASPSKWEESLPSGSRQGFQSGLKR 370
Query: 257 RRSVLDEEMGSVGSIRRIRQKSNLLYPKGLSTPSSFTFIPVRGIGSETARHFLSSKVHPF 316
R SVLD ++GSVG +RRIRQKSN L + L+ P S + + VR G E
Sbjct: 371 RSSVLDNDIGSVGPVRRIRQKSN-LSSRSLALPVSESPLSVRANGGE------------- 430
Query: 317 SSSAGKTLHPGDTKGSLSKVSADSENDMNPSSSFNQIPLRSSEMASKILEQLETLTPQKE 376
KT H S DS D+ P SSFN +P +SSEMASKIL+QL+
Sbjct: 431 -----KTTH----------TSKDSAEDI-PGSSFNLVPTKSSEMASKILQQLD------- 490
Query: 377 KSSELKLLSVRSNSPMKLSPSMLHGPALRSLEDVDSSKYLKNVEDIRSNDARDHTTLDNG 436
KL+S R SP KLSPSML GPAL+SL++V++ K+L N+ + ++N ++
Sbjct: 491 -----KLVSTREKSPSKLSPSMLRGPALKSLQNVEAPKFLGNLPEKKANS--PDSSYQKQ 550
Query: 437 KVEERSSLKFKVPNDKSISTACDGASSSGLMKDA-VPSSGLQVSFVGPSSQ---TKCSFQ 496
++ S + + + A DG S +G KD + G+ + + K SF+
Sbjct: 551 EISRESVSREVLAQSEKTGDAVDGTSKTGSSKDQDMRGKGVYMPLTNSLEEHPPKKRSFR 610
Query: 497 MSALEDFEDLDEE-GYSNGP--VTDISLAVSKPSDTEAITVLDKPRASVEVKPSTLSEMK 556
MSA EDF +LD++ G ++ P V + A ++ + +KP E PST
Sbjct: 611 MSAHEDFLELDDDLGAASTPCEVAEKQNAFEVEKSHISMPIGEKPLTPSEAMPSTSYISN 670
Query: 557 KINDQRKSDAPVTTGKS-----PISFATASSPSITANAIVPESTSRPEITVSSEVPKTTI 616
Q S+ + T ++ PI S+ + + + T + I+ +
Sbjct: 671 GDASQGTSNGSLETERNKFVAFPIEAVQQSNMASEPTSKFIQGTEKSSISSGKPTSEEKR 730
Query: 617 APLFGFGNKLPSQTESISSAPTFTFGNKVATLANEQNAVPVVASESNVAPTQQTSVPSTF 676
PL + P + ++ P +F L N+ + +++ + T T+
Sbjct: 731 IPL-----EEPKKPAAV--FPNISFSPPATGLLNQNSG---ASADIKLEKTSSTA----- 790
Query: 677 TFG-DKTTASIPENAATENGIKNVGLPLKFASPSVNEK-ESARVDSVSVLKAEISSSSIR 736
FG + A E+ T + + A+P++N SA ++V+ + S +S
Sbjct: 791 -FGVSEAWAKPTESKKTFSNSASGAESSTSAAPTLNGSIFSAGANAVTPPPSNGSLTSSP 850
Query: 737 SFGVS-KEFMSGNKAGDKSSSAGLSVGTF--ENLFSSVSTSTPTPSLFSLSSP-STNSNL 796
SF S S N GD S+ T ++F + TS + S + +SP S+ S
Sbjct: 851 SFPPSISNIPSDNSVGDMPSTVQSFAATHNSSSIFGKLPTSNDSNSQSTSASPLSSTSPF 910
Query: 797 NNGSLVPTPSIVTPSIVSFSATSFSKDISNQNSSIKPSLTATPHNSEPAATASLSTSSPI 856
G P P+ VS S+ SK+ +N++ + T A+A ST
Sbjct: 911 KFGQ--PAAPFSAPA-VSESSGQISKETEVKNATFGNTST---FKFGGMASADQSTGIVF 970
Query: 857 PSFSA----APIFKFGSPSV-------PSTSAPALSAPSGVGSVETKTTLETTLGNLSGT 916
+ SA P F FGS SV PST+ A SAP GS+ T +T G +
Sbjct: 971 GAKSAENKSRPGFVFGSSSVVGGSTLNPSTA--AASAPESSGSLIFGVTSSSTPGTETSK 1030
Query: 917 PPSDTSAAK------------------------ASSTGNSIFQFGA--PATADSNKQPVS 976
+ ++A ++STG+S+F F A A+A S++ S
Sbjct: 1031 ISASSAATNTGNSVFGTSSFAFTSSGSSMVGGVSASTGSSVFGFNAVSSASATSSQSQAS 1090
Query: 977 STFSQGNGTAFGAPVSPASSGPASSTQSTPV-FPFSSSSTSFGLAGNTGLSSGSSLFGSS 1036
+ F GN A SG +STQS P F S S+ SFGL+GN+ L+S SS FG S
Sbjct: 1091 NLFGAGN-----AQTGNTGSGTTTSTQSIPFQFGSSPSAPSFGLSGNSSLASNSSPFGFS 1150
Query: 1037 APASNLFTSGTTLGLASSSSSASNSVSSGA---GTSSSLSNWQSSSTPSFSTGF--SSTP 1096
+FTS +T L+S++SSAS+S + + GTS N +S P FS+ F SSTP
Sbjct: 1151 KSEPAVFTSVSTPQLSSTNSSASSSSTMSSPLFGTSWQAPNSSPNSGPVFSSSFTTSSTP 1210
Query: 1097 TGVFSFGLSSSSTTSNSAPVVFGSSSTGA-ATAPMFSFTSAASSQPAFGNSTSQPAFGNS 1156
T FSFG SS++T S++ +FG+S+ + +P+F F S + P QP FGNS
Sbjct: 1211 T-TFSFGGSSAATVSSTTTPIFGASTNNTPSPSPIFGFGSTPPTTP------QQPVFGNS 1270
Query: 1157 SSQPAFGNSSSQPAFGNSSSQPAFGTLSSQPAFGTSSSQPAFDT--SSSQPAFGTSSSQP 1198
+ SQ FGNS+ AFG ++ + D+ + A S P
Sbjct: 1271 -------GTPSQSLFGNSTPGFAFGAPNNGNGINNNQQVSMEDSMAEDTDQANRASMVAP 1275
BLAST of Sed0010208 vs. ExPASy TrEMBL
Match:
A0A6J1GY88 (nuclear pore complex protein NUP1-like OS=Cucurbita moschata OX=3662 GN=LOC111457932 PE=4 SV=1)
HSP 1 Score: 1414.4 bits (3660), Expect = 0.0e+00
Identity = 900/1369 (65.74%), Postives = 971/1369 (70.93%), Query Frame = 0
Query: 1 MGNENQEEVAADPPGVLEEKNLSLVPGIESDNTHGVTDLEQMLKEKTFTKFEIDRLTELL 60
MGNEN EEVAAD PG E N P I++DNTHGVTDLEQ+LKEKTFT+FEIDRLTELL
Sbjct: 91 MGNENHEEVAADLPGTQEGTNRDFGPSIKTDNTHGVTDLEQILKEKTFTRFEIDRLTELL 150
Query: 61 KSRVADVPSGVEGRKFEQVPSKPVISYGIHERSPKFPPQDGVSSHIVPTHDMSAKVLNED 120
KSRV DVPSG E RKFEQ PS PVISY I E SPKF QDG+SSH+VPT M A VL+ED
Sbjct: 151 KSRVVDVPSGAEERKFEQAPSTPVISYEIQEGSPKFRAQDGISSHVVPTQVMRANVLDED 210
Query: 121 VASPAQIAKMYMGGRPLKATPLSMASSSQKLGDSFVSGDTSKSSTLSLVPRSPGNFDVNE 180
VASPA+IAK YMG RP K+TPLSMAS S K GDSF S + SKSS L+LVPRSPGNFDV E
Sbjct: 211 VASPAEIAKAYMGSRPPKSTPLSMASHSHKFGDSFASENLSKSSALTLVPRSPGNFDVIE 270
Query: 181 NGFVTPRSRGRSALYSMARTPYSRVSATPSIKNSVATIDAYSRATGSSLSQSALEQGRLL 240
NGFVTPRSRGRSALY+MAR PYS VSAT SIKNSVAT DAY RATGSS SQ A E+GR+L
Sbjct: 271 NGFVTPRSRGRSALYNMARMPYSGVSATHSIKNSVATTDAY-RATGSSSSQLAWERGRVL 330
Query: 241 GSNQGALKCRRSVLDEEMGSVGSIRRIRQKSNLLYPKGLSTPSSFTFIPVRGIGSETARH 300
GS QGALK R SVLD+EMG VG IRR+R KSNLLYP GLS PSS T IPV GIGSE A+
Sbjct: 331 GSKQGALKRRSSVLDDEMGHVGPIRRLRHKSNLLYPTGLSLPSSSTSIPVSGIGSENAQQ 390
Query: 301 FLSSKVHPFSSSAGKTLHPGDTKGSLSKVSADSENDMNPSSSFNQIPLRSSEMASKILEQ 360
F S+KVHPFSSS+GK L+ SLSK SA+SEND+ PSSSF+QIPLRSSEMASKILEQ
Sbjct: 391 FQSTKVHPFSSSSGKGLY----SRSLSKRSAESENDVKPSSSFSQIPLRSSEMASKILEQ 450
Query: 361 LETLTPQKEKSSELKLLSVRSNSPMKLSPSMLHGPALRSLEDVDSSKYLKNVEDIRSNDA 420
LE LTP K+KSS+LKLLSV +NSP KLSPSMLHGPALRSLEDVDSSKYL+NVEDI+SNDA
Sbjct: 451 LEKLTPPKDKSSKLKLLSVTNNSPTKLSPSMLHGPALRSLEDVDSSKYLENVEDIQSNDA 510
Query: 421 RDHTTLDNGKVEERSSLKFKVPNDKSISTACDGASSSGLMKDAVPSSGLQVSFVGPSSQT 480
R+ T+ N KVEE SSLK+K+P +K IS A DG S KD V SS QVSFVG S QT
Sbjct: 511 RELTSQKNNKVEESSSLKYKLPINKEIS-AGDGLGSPVPTKDTVLSSRPQVSFVGASPQT 570
Query: 481 KCSFQMSALEDFEDLDEEGYSNGPVTDIS-----------LAVSKPSDTEAITVLDKPRA 540
KC+FQMSA EDF D+DEEG SNGPVTDIS +A+SKPSDTEAITV DKP+A
Sbjct: 571 KCAFQMSAHEDFVDIDEEGCSNGPVTDISFDRREKMDASLVAMSKPSDTEAITV-DKPQA 630
Query: 541 SVEVKPSTLSEMKKINDQRKSDAPVTTGKSPI-SFATASSPSITANAIVPESTSRPEITV 600
S EVKPST+SE+ KIN QRKSD PVT KSPI SFATAS PSIT NA PEST RPE +
Sbjct: 631 SAEVKPSTVSELNKINGQRKSDVPVTAEKSPIFSFATASPPSITTNAKDPESTLRPEKNI 690
Query: 601 SSEVPKTTIAPLFGFGNKLPSQTESISSAPTFTFGNKVATLANEQNAVPVVASESNVAPT 660
S E PK AP+FGFG+KLPSQ ES SSAPTF FGNK A NEQNAVPV SESNVAP
Sbjct: 691 SPEAPKPANAPIFGFGDKLPSQKESFSSAPTFAFGNKFAPSTNEQNAVPVATSESNVAP- 750
Query: 661 QQTSVPSTFTFGDKTTASIPENAATENGIKNVGLPLKFASPSVNEKESARVDSVSVLKAE 720
K T IP NAATENG KN G P KFASP VNEKESA+V S SV KAE
Sbjct: 751 ------------GKATFPIPANAATENGNKNTGSPFKFASPLVNEKESAKVGSSSVFKAE 810
Query: 721 ISSSSIRSFGVSKEFMSGNKAGDKSSSAGLSVGTFENLF-SSVSTSTPTPSLFSLSSPST 780
+SSSI SFGV KE MS +KAGDKS SAGLSVGT ENLF SSVSTST PSLFS SSPST
Sbjct: 811 SNSSSILSFGVPKESMS-DKAGDKSLSAGLSVGTSENLFSSSVSTSTSAPSLFSFSSPST 870
Query: 781 NSNLNNGSLVPTPSIVTPSIVSFSATSFSKDISNQNSSIKPSLTATPHNSEPAATASLST 840
NSNLNNGSLV TPSI S AT+FS +I+NQN SIKPSLT P NSEPA T SLS
Sbjct: 871 NSNLNNGSLVS-----TPSIFSSPATTFSNNITNQNPSIKPSLTTAPSNSEPATTTSLSM 930
Query: 841 SSPIPSFSAAPIFKFGSPSVPSTSAPALSAPSGVGSVETKTTLETTLGNLSGTPPSDTSA 900
SP+PSFSAAPIFKFGSPSVPS+SAPALSA ETKT ETT GNLSG PPSDTSA
Sbjct: 931 PSPVPSFSAAPIFKFGSPSVPSSSAPALSA------AETKTKQETTFGNLSGIPPSDTSA 990
Query: 901 AKASSTGNSIFQFGAPATADSNKQPVSSTFSQGNGTAFGAPVSPASSGPASSTQSTPVFP 960
AK SSTG S+FQFGA AT DSNK+P +ST + GN FGAPV PA+SG ASSTQSTPV P
Sbjct: 991 AKVSSTGGSVFQFGAAATTDSNKRPENSTSAPGNVPTFGAPVFPANSGVASSTQSTPVLP 1050
Query: 961 FSSSSTSFGLAGNTGLSSGSSLFGSSAPASNLFTSGTTLGLASSSSSASNSVSSGAGTSS 1020
FSSSSTSFGLA NTGLSSGSSLFGSSAPASNLF+SGTT GL +SSSA+NSVSSGAGTSS
Sbjct: 1051 FSSSSTSFGLAANTGLSSGSSLFGSSAPASNLFSSGTTFGLTGTSSSANNSVSSGAGTSS 1110
Query: 1021 SLSNWQSSSTPSFSTGFSSTPTGVFSFGLSSSSTTSNSAPVVFGSSSTGAATAPMFSFTS 1080
S NWQ+SSTPSFSTGFSSTPTG F FGLSSSS SNS+P++FGSS+T A+T MFSFTS
Sbjct: 1111 SFFNWQTSSTPSFSTGFSSTPTGGFPFGLSSSSAASNSSPMLFGSSTTSASTTSMFSFTS 1170
Query: 1081 AASSQPAFGNSTSQPAFGNSSSQPAFGNSSSQPAFGNSSSQPAFGTLSSQPAFGTSSSQP 1140
AASSQPAF N
Sbjct: 1171 AASSQPAFSN-------------------------------------------------- 1230
Query: 1141 AFDTSSSQPAFGTSSSQPAFGTSSSQPAFGTSSSQPAFGSQPAFGSQPAFGSQPSFGTSS 1200
Sbjct: 1231 ------------------------------------------------------------ 1272
Query: 1201 SQPAFGTSSSQPAFGHLSSQPAFGNSQPAFGNSSSQPAFAISNPGFTFGSTPLANNFQAN 1260
SN GFTFGSTP ANN QAN
Sbjct: 1291 -----------------------------------------SNHGFTFGSTPPANNDQAN 1272
Query: 1261 TEDSMAEDGVQAVATPTPMPTFGQQPLTPPPSSGYMFGSTAPSPQAASPFQFGNQQNVPS 1320
EDSMAED VQAV PT PTFGQQPLTPPPSSG+MFGS AP P AASPFQFG+QQN P+
Sbjct: 1351 MEDSMAEDTVQAVTLPT--PTFGQQPLTPPPSSGFMFGSAAPPPVAASPFQFGSQQNAPT 1272
Query: 1321 PQNPSLFQASGS--FNAPSAGGSFSLGAGGGDKANRKYIRVKNSKSRRK 1355
PQNPS F ASGS FNA SAGGSFSLGAGGGDKANRKY++VK SKSR+K
Sbjct: 1411 PQNPSPFHASGSLDFNA-SAGGSFSLGAGGGDKANRKYVKVK-SKSRKK 1272
BLAST of Sed0010208 vs. ExPASy TrEMBL
Match:
A0A6J1JSL2 (nuclear pore complex protein NUP1-like OS=Cucurbita maxima OX=3661 GN=LOC111487168 PE=4 SV=1)
HSP 1 Score: 1379.4 bits (3569), Expect = 0.0e+00
Identity = 892/1372 (65.01%), Postives = 965/1372 (70.34%), Query Frame = 0
Query: 1 MGNENQEEVAADPPGVLEEKNLSLVPGIESDNTHGVTDLEQMLKEKTFTKFEIDRLTELL 60
MGNEN EEVAAD G +E N P I++DNTHGVTDLEQ+LKEKTFT+FEIDRLTELL
Sbjct: 91 MGNENHEEVAADLSGT-QEGNCDFGPSIKTDNTHGVTDLEQILKEKTFTRFEIDRLTELL 150
Query: 61 KSRVADVPSGVEGRKFEQVPSKPVISYGIHERSPKFPPQDGVSSHIVPTHDMSAKVLNED 120
KSRV DVPSGVE RKFE S PVISY I E SPKF QDG+SSH+VPT M A VL+ED
Sbjct: 151 KSRVVDVPSGVEERKFEHASSTPVISYEIQEGSPKFRAQDGISSHVVPTQVMRANVLDED 210
Query: 121 VASPAQIAKMYMGGRPLKATPLSMASSSQKLGDSFVSGDTSKSSTLSLVPRSPGNFDVNE 180
VASPA+IAK +MG RP KATPLSMAS S K D+F S + SKSS L+LVPRSPGNFDV E
Sbjct: 211 VASPAEIAKAFMGSRPPKATPLSMASHSHKFRDNFASENLSKSSALTLVPRSPGNFDVIE 270
Query: 181 NGFVTPRSRGRSALYSMARTPYSRVSATPSIKNSVATIDAYSRATGSSLSQSALEQGRLL 240
NGFVTPRSRGRSALY+MAR PYS VSAT SIKNSVAT DAY RATGSS SQ ALE+GR+L
Sbjct: 271 NGFVTPRSRGRSALYNMARMPYSGVSATHSIKNSVATTDAY-RATGSSSSQLALERGRVL 330
Query: 241 GSNQGALKCRRSVLDEEMGSVGSIRRIRQKSNLLYPKGLSTPSSFTFIPVRGIGSETARH 300
GS QGALK R SVLD+EMG VG IRR+R KSNLLYP GLS PSS T IPV GIGSE A+
Sbjct: 331 GSKQGALKRRSSVLDDEMGHVGPIRRLRHKSNLLYPTGLSLPSSSTSIPVSGIGSENAQQ 390
Query: 301 FLSSKVHPFSSSAGKTLHPGDTKGSLSKVSADSENDMNPSSSFNQIPLRSSEMASKILEQ 360
F S+KVHPFSSS GK L+ SLSK SA+SEND+ PSSSF+QIPLRSSEMASKILEQ
Sbjct: 391 FQSTKVHPFSSS-GKGLY----SRSLSKRSAESENDVKPSSSFSQIPLRSSEMASKILEQ 450
Query: 361 LETLTPQKEKSSELKLLSVRSNSPMKLSPSMLHGPALRSLEDVDSSKYLKNVEDIRSNDA 420
LE LTP K+KS +LKLLSV +NSP KLSPSMLHGPALRSLEDVDSSKYL+NVEDI+SNDA
Sbjct: 451 LEKLTPPKDKSLKLKLLSVTNNSPTKLSPSMLHGPALRSLEDVDSSKYLENVEDIQSNDA 510
Query: 421 RDHTTLDNGKVEERSSLKFKVPNDKSISTACDGASSSGLMKDAVPSSGLQVSFVGPSSQT 480
R+ T+ N KVEE SSLK+K+P +K+IS A DG S KD V SS QVSFVG S QT
Sbjct: 511 RELTSQKN-KVEESSSLKYKLPINKAIS-AGDGLGSPVPTKDTVLSSRPQVSFVGASPQT 570
Query: 481 KCSFQMSALEDFEDLDEEGYSNGPVTDIS-----------LAVSKPSDTEAITVLDKPRA 540
KC+FQMSA EDF D+DEEG SNGPVTDIS +A+SKP+DTEAITV DKP+A
Sbjct: 571 KCAFQMSAHEDFVDIDEEGCSNGPVTDISFDRREKMDGSLVAMSKPNDTEAITV-DKPQA 630
Query: 541 SVEVKPSTLSEMKKINDQRKSDAPVTTGKSPI-SFATASSPSITANAIVPESTSRPEITV 600
S EVKPST SE+ KIN Q KSD PVT KSPI SFATAS PSITANA PES RPE +
Sbjct: 631 SAEVKPSTESELNKINGQSKSDVPVTAEKSPILSFATASPPSITANAKDPESILRPEKNI 690
Query: 601 SSEVPKTTIAPLFGFGNKLPSQTESISSAPTFTFGNKVATLANEQNAVPVVASESNVAPT 660
SSE PK AP+FGFG+KLPSQ ES SSAPTF FGNK A NEQNAVPV SESNVAP
Sbjct: 691 SSEAPKAANAPIFGFGDKLPSQKESFSSAPTFAFGNKFAPSTNEQNAVPVATSESNVAP- 750
Query: 661 QQTSVPSTFTFGDKTTASIPENAATENGIKNVGLPLKFASPSVNEKESARVDSVSVLKAE 720
K T IP NAATENG KN G P KFASP VNEKES +V S SV KAE
Sbjct: 751 ------------GKATFPIPANAATENGNKNTGAPFKFASPLVNEKESTKVGSSSVFKAE 810
Query: 721 ISSSSIRSFGVSKEFMSGNKAGDKSSSAGLSVGTFENLF-SSVSTSTPTPSLFSLSSPST 780
+S SI SFG +E MS +KAGDK SSAGLSVGT ENLF SSVSTST PSLFS SSPST
Sbjct: 811 SNSGSILSFGFPQESMS-DKAGDKRSSAGLSVGTSENLFSSSVSTSTSAPSLFSFSSPST 870
Query: 781 NSNLNNGSLVPTPSIVTPSIVSFSATSFSKDISNQNSSIKPSLTATPHNSEPAATASLST 840
NSNLNNGSLV TPSI S AT+FS +I+NQN SIKPSLT P NSEPA T SLS
Sbjct: 871 NSNLNNGSLVS-----TPSIFSSPATTFSNNITNQNPSIKPSLTTAPSNSEPATTTSLSM 930
Query: 841 SSPIPSFSAAPIFKFGSPSVPSTSAPALSAPSGVGSVETKTTLETTLGNLSGTPPSDTSA 900
SP+PSFSAAPIFKFGSPSVPS+SAPALSA ETKT ETT GNLSG PPSDTSA
Sbjct: 931 PSPVPSFSAAPIFKFGSPSVPSSSAPALSA------AETKTKQETTFGNLSGIPPSDTSA 990
Query: 901 AKASSTGNSIFQFGAPATADSNKQPVSSTFSQGNGTAFGAPVSPASSGPASSTQSTPVFP 960
AK SS G S+FQFGA AT DSNKQP + T + GN FGAPV PA+SG ASSTQSTPV P
Sbjct: 991 AKVSSIGGSVFQFGAAATTDSNKQPENLTSAPGNVPTFGAPVFPANSGVASSTQSTPVLP 1050
Query: 961 FSSSSTSFGLAGNTGLSSGSSLFGSSAPASNLFTSGTTLGLASSSSSASNSVSSGAGTSS 1020
FSSSSTSFGLA NTGLSSGSSLFGSSAPASNLF+SGTT GL +SSSA+NSVSSGAGTSS
Sbjct: 1051 FSSSSTSFGLAANTGLSSGSSLFGSSAPASNLFSSGTTFGLTGTSSSANNSVSSGAGTSS 1110
Query: 1021 SLSNWQSSSTPSFSTGFSSTPTGVFSFGLSSSSTTSNSAPVVFGSSSTGAATAPMFSFTS 1080
S NWQ+SSTPSFSTGFSSTPTG FSFGLSSSS SNS+P++FGSS+T A+T MFSFTS
Sbjct: 1111 SFFNWQTSSTPSFSTGFSSTPTGGFSFGLSSSSAASNSSPMLFGSSTTSASTTSMFSFTS 1170
Query: 1081 AASSQPAFGNSTSQPAFGNSSSQPAFGNSSSQPAFGNSSSQPAFGTLSSQPAFGTSSSQP 1140
ASSQPAFGN
Sbjct: 1171 TASSQPAFGN-------------------------------------------------- 1230
Query: 1141 AFDTSSSQPAFGTSSSQPAFGTSSSQPAFGTSSSQPAFGSQPAFGSQPAFGSQPSFGTSS 1200
Sbjct: 1231 ------------------------------------------------------------ 1272
Query: 1201 SQPAFGTSSSQPAFGHLSSQPAFGNSQPAFGNSSSQPAFAISNPGFTFGSTPLANNFQAN 1260
SN GFTFGSTPLANN QAN
Sbjct: 1291 -----------------------------------------SNHGFTFGSTPLANNDQAN 1272
Query: 1261 TEDSMAEDGVQAVATPTPMPTFG---QQPLTPPPSSGYMFGSTAPSPQAASPFQFGNQQN 1320
EDSMAED VQAV PT PTFG QQPLTPPPSSG+MFGS AP P AASPFQFG+QQN
Sbjct: 1351 MEDSMAEDTVQAVTLPT--PTFGQQPQQPLTPPPSSGFMFGSAAPPPVAASPFQFGSQQN 1272
Query: 1321 VPSPQNPSLFQASGS--FNAPSAGGSFSLGAGGGDKANRKYIRVKNSKSRRK 1355
P+PQNPS F ASGS FNA SAGGSFSLGAGGGDKANRKY++VK SKSR+K
Sbjct: 1411 APTPQNPSPFHASGSLDFNA-SAGGSFSLGAGGGDKANRKYVKVK-SKSRKK 1272
BLAST of Sed0010208 vs. ExPASy TrEMBL
Match:
A0A6J1FKS9 (nuclear pore complex protein NUP1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111444902 PE=4 SV=1)
HSP 1 Score: 1369.4 bits (3543), Expect = 0.0e+00
Identity = 876/1370 (63.94%), Postives = 972/1370 (70.95%), Query Frame = 0
Query: 4 ENQEEVAADPPGVLEEKNLSLVPGIESDNTHGVTDLEQMLKEKTFTKFEIDRLTELLKSR 63
+NQEEVAADPPG E N VP I S+N HGV+DLE++LKEKTFT+FEIDRLTELLKSR
Sbjct: 94 KNQEEVAADPPGTQEGTNNDFVPSINSNNIHGVSDLEKILKEKTFTRFEIDRLTELLKSR 153
Query: 64 VADVPSGVEGRKFEQVPSKPVISYGIHERSPKFPPQDGVSSHIVPTHDMSAKVLNEDVAS 123
VADVPSGVE RKFE V S PVISY I E SPKFP Q+GV H+VPTH ++A V +EDVAS
Sbjct: 154 VADVPSGVESRKFEMVSSTPVISYDIQEGSPKFPAQEGVRPHMVPTHVLNANVPDEDVAS 213
Query: 124 PAQIAKMYMGGRPLKATPLSMASSSQKLGDSFVSGDTSKSSTLSLVPRSPGNFDVNENGF 183
PA+IAK +MG RP KATPLSM + SQK GD+F G+ SKSSTLSLVPRSPGNFDV EN F
Sbjct: 214 PAEIAKAFMGSRPPKATPLSMVAHSQKFGDTFALGNPSKSSTLSLVPRSPGNFDV-ENDF 273
Query: 184 VTPRSRGRSALYSMARTPYSRVSATPSIKNSVATIDAYSRATGSSLSQSALEQGRLLGSN 243
VTPRSRGRSALYSMAR PYSRV ATPSIKNSVAT D+Y RAT +S SQSA EQGRLL SN
Sbjct: 274 VTPRSRGRSALYSMARMPYSRVRATPSIKNSVATTDSY-RATVTSSSQSAWEQGRLLESN 333
Query: 244 QGALKCRRSVLDEEMGSVGSIRRIRQKSNLLYPKGLSTPSSFTFIPVRGIGSETARHFLS 303
QGALK R SVLD+E+GSVG IRRIR KSNLL+PKGLS PSS T IPV GIGSET++H S
Sbjct: 334 QGALKRRSSVLDDEIGSVGPIRRIRHKSNLLFPKGLSLPSSSTSIPVSGIGSETSQHLQS 393
Query: 304 SKVHPFSSSAGKTLHPGDTKGSLSKVSADSENDMNPSSSFNQIPLRSSEMASKILEQLET 363
+KVHPFSS AGK + +TK +LSK+SA+SEND PSSSF QIPLRSSEMA KILEQL+
Sbjct: 394 TKVHPFSSPAGKAPYSSETKRNLSKMSAESENDRTPSSSFPQIPLRSSEMALKILEQLDK 453
Query: 364 LTPQKEKSSELKLLSVRSNSPMKLSPSMLHGPALRSLEDVDSSKYLKNVEDIRSNDARDH 423
LTP KEKSSELKL SVR+NSPMKLSPSMLHGPALRSLEDVDS+KYL+NVEDIRSND RD
Sbjct: 454 LTPPKEKSSELKLHSVRNNSPMKLSPSMLHGPALRSLEDVDSAKYLENVEDIRSNDGRDL 513
Query: 424 TTLDNGKVEERSSLKFKVPNDKSISTACDGASSSGLMKDAVPSSGLQVSFVGPSSQTKCS 483
T+ K E+ S LK KVP+DKSIST G SS KD V SSGLQVSFVGPSS TKC+
Sbjct: 514 TSKKKDKFEDSSLLKSKVPSDKSISTG-GGVGSSVPSKDTVSSSGLQVSFVGPSSLTKCA 573
Query: 484 FQMSALEDFEDLDEEGYSNGPVT-----------DISLAVSKPSDTEAITVLDKPRASVE 543
FQMS EDF D+D+E YSNGPV+ D +AV KPSDTEAITV DKP+AS++
Sbjct: 574 FQMSVQEDFVDMDDEEYSNGPVSAKSFERREKVDDSLVAVGKPSDTEAITV-DKPQASIQ 633
Query: 544 VKPSTLSEMKKINDQRKSDAPVTTGKSPI-SFATASSPSITANAIVPESTSRPEITVSSE 603
KPS +SEMKKINDQ KSD PVTT KS I SF TAS S TAN I PEST+RPE SSE
Sbjct: 634 AKPSPVSEMKKINDQAKSDVPVTTEKSSIFSFPTASPSSTTANVIEPESTTRPEKIASSE 693
Query: 604 VPKTTIAPLFGFGNKLPSQTESISSAPTFTFGNKVATLANEQNAVPVVASESNVAPTQQT 663
VPK AP+FGFG KLPSQ + + S+PTFTFGNKV T NEQNAVP V SE NVAPT Q
Sbjct: 694 VPKAAAAPIFGFGEKLPSQKDPVFSSPTFTFGNKVTTSTNEQNAVPAVTSEGNVAPTLQA 753
Query: 664 SVPSTFTFGDKTTASIPENAATENGIKNVGLPLKFASPSVNEKESARVDSVSVLKAEISS 723
S P+TF FGDK T IP + ATENG G P KFAS VNEKE A+ S SV K+E SS
Sbjct: 754 SAPTTFKFGDKATFPIPASTATENGNSEAGSPFKFASSLVNEKEGAKAGSASVFKSESSS 813
Query: 724 SSIRSFGVSKEFMSGNKAGD-KSSSAGLSVGTFENLFSSVSTSTPTPSLFSLSSPSTNSN 783
SS SFGV KE MS KAGD KSSSAGLSVGT NL S +STPTPSLFS SSP+TNSN
Sbjct: 814 SSTLSFGVPKESMS-EKAGDKKSSSAGLSVGTSGNLLLSSVSSTPTPSLFSFSSPTTNSN 873
Query: 784 LNNGSLVPTPSIVTPSIVSFSATSFSKDISNQNSSIKPSLTATPHNSEPAATASLSTSSP 843
L NGSL TPS PS + +F +I+NQNSSIKPSL A NSEP T SLSTSSP
Sbjct: 874 LINGSLGSTPS-TFPS----PSNTFPSNITNQNSSIKPSLNAATSNSEPVTTTSLSTSSP 933
Query: 844 IPSFSAAPIFKFGSPSVPSTSAPALSAPSGVGSVETKTTLETT-LGNLSGTPPSDTSAAK 903
+PSFSAAPIFKFGS SVPS+ SAPSGVGSVETKT ETT GN+SG PSDTSAAK
Sbjct: 934 MPSFSAAPIFKFGSSSVPSS-----SAPSGVGSVETKTKQETTPFGNVSGISPSDTSAAK 993
Query: 904 ASSTGNSIFQFGAPA-TADSNKQPVSSTFSQGNGTAFGAPVSPASSGPASSTQSTPVFPF 963
STG+S+FQFGA + T+DSNKQP STF+ + +FGAPV PASSG ASSTQSTPV PF
Sbjct: 994 VFSTGSSVFQFGAASTTSDSNKQPEKSTFAPVSVPSFGAPVLPASSGVASSTQSTPVSPF 1053
Query: 964 SSSSTSFGLAGNTGLSSGSSLFGSSAPASNLFTSGTTLGLASSSSSASNSVSSGAGTSSS 1023
SSSSTSFGL GNTGL+SG+SL GSSAPASNLFTSG T G SSSSA+NSVSSGAGTSSS
Sbjct: 1054 SSSSTSFGLTGNTGLASGNSLVGSSAPASNLFTSGATFGF-GSSSSANNSVSSGAGTSSS 1113
Query: 1024 LSNWQSSSTPSFSTGFSSTPTGVFSFGLSSSSTTSNSAPVVFGSSSTGAA-TAPMFSFTS 1083
NWQ+SS PSFS+GF STPTG FSFGL+SSS S+S+P++FGSS+TGAA T MFSFTS
Sbjct: 1114 FFNWQASSAPSFSSGFGSTPTGGFSFGLASSSAASSSSPMLFGSSTTGAASTTSMFSFTS 1173
Query: 1084 AASSQPAFGNSTSQPAFGNSSSQPAFGNSSSQPAFGNSSSQPAFGTLSSQPAFGTSSSQP 1143
AA++ P
Sbjct: 1174 AATAAP------------------------------------------------------ 1233
Query: 1144 AFDTSSSQPAFGTSSSQPAFGTSSSQPAFGTSSSQPAFGSQPAFGSQPAFGSQPSFGTSS 1203
Sbjct: 1234 ------------------------------------------------------------ 1293
Query: 1204 SQPAFGTSSSQPAFGHLSSQPAFGNSQPAFGNSSSQPAFAISNPGFTFGSTPLANNFQAN 1263
SQPAFGT SN GFTFGSTP ANN AN
Sbjct: 1294 SQPAFGT----------------------------------SNHGFTFGSTPPANNDHAN 1297
Query: 1264 TEDSMAEDGVQAVATPTPMPTFGQQPLTPPPSSGYMFGSTAPSPQAASPFQF-GNQQNVP 1323
EDSMAED VQ VA+PTPMP+FGQQPLTPPPSSG++FGSTAPSP A+PFQF G+QQNVP
Sbjct: 1354 MEDSMAEDTVQTVASPTPMPSFGQQPLTPPPSSGFVFGSTAPSPLGANPFQFGGSQQNVP 1297
Query: 1324 SPQNPSLFQASGS--FNAPSAGGSFSLGAGGGDKANRKYIRVKNSKSRRK 1355
+PQNP+ FQASGS FNA SAGGSFSLGAGGGDK+NRK+++VK SKSR+K
Sbjct: 1414 TPQNPNPFQASGSLDFNA-SAGGSFSLGAGGGDKSNRKFVKVK-SKSRKK 1297
BLAST of Sed0010208 vs. ExPASy TrEMBL
Match:
A0A6J1FF52 (nuclear pore complex protein NUP1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444902 PE=4 SV=1)
HSP 1 Score: 1364.7 bits (3531), Expect = 0.0e+00
Identity = 876/1374 (63.76%), Postives = 972/1374 (70.74%), Query Frame = 0
Query: 4 ENQEEVAADPPGVLEEKNLSLVPGIESDNTHGVTDLEQMLKEKTFTKFEIDRLTELLKSR 63
+NQEEVAADPPG E N VP I S+N HGV+DLE++LKEKTFT+FEIDRLTELLKSR
Sbjct: 94 KNQEEVAADPPGTQEGTNNDFVPSINSNNIHGVSDLEKILKEKTFTRFEIDRLTELLKSR 153
Query: 64 VADVPSGVEGRKFEQVPSKPVISYGIHERSPKFPPQDGVSSHIVPTHDMSAKVLNEDVAS 123
VADVPSGVE RKFE V S PVISY I E SPKFP Q+GV H+VPTH ++A V +EDVAS
Sbjct: 154 VADVPSGVESRKFEMVSSTPVISYDIQEGSPKFPAQEGVRPHMVPTHVLNANVPDEDVAS 213
Query: 124 PAQIAKMYMGGRPLKATPLSMASSSQKLGDSFVSGDTSKSSTLSLVPRSPGNFDVNENGF 183
PA+IAK +MG RP KATPLSM + SQK GD+F G+ SKSSTLSLVPRSPGNFDV EN F
Sbjct: 214 PAEIAKAFMGSRPPKATPLSMVAHSQKFGDTFALGNPSKSSTLSLVPRSPGNFDV-ENDF 273
Query: 184 VTPRSRGRSALYSMARTPYSRVSATPSIKNSVATIDAYSRATGSSLSQSALEQGRLLGSN 243
VTPRSRGRSALYSMAR PYSRV ATPSIKNSVAT D+Y RAT +S SQSA EQGRLL SN
Sbjct: 274 VTPRSRGRSALYSMARMPYSRVRATPSIKNSVATTDSY-RATVTSSSQSAWEQGRLLESN 333
Query: 244 QGALKCRRSVLDEEMGSVGSIRRIRQKSNLLYPKGLSTPSSFTFIPVRGIGSETARHFLS 303
QGALK R SVLD+E+GSVG IRRIR KSNLL+PKGLS PSS T IPV GIGSET++H S
Sbjct: 334 QGALKRRSSVLDDEIGSVGPIRRIRHKSNLLFPKGLSLPSSSTSIPVSGIGSETSQHLQS 393
Query: 304 SKVHPFSSSAGKTLHPGDTKGSLSKVSADSENDMNPSSSFNQIPLRSSEMASKILEQLET 363
+KVHPFSS AGK + +TK +LSK+SA+SEND PSSSF QIPLRSSEMA KILEQL+
Sbjct: 394 TKVHPFSSPAGKAPYSSETKRNLSKMSAESENDRTPSSSFPQIPLRSSEMALKILEQLDK 453
Query: 364 LTPQKEKSSELKLLSVRSNSPMKLSPSMLHGPALRSLEDVDSSKYLKNVEDIRSNDARDH 423
LTP KEKSSELKL SVR+NSPMKLSPSMLHGPALRSLEDVDS+KYL+NVEDIRSND RD
Sbjct: 454 LTPPKEKSSELKLHSVRNNSPMKLSPSMLHGPALRSLEDVDSAKYLENVEDIRSNDGRDL 513
Query: 424 TTLDNGKVEERSSLKFKVPNDKSISTACDGASSSGLMKDAVPSSGLQVSFVGPSSQTKCS 483
T+ K E+ S LK KVP+DKSIST G SS KD V SSGLQVSFVGPSS TKC+
Sbjct: 514 TSKKKDKFEDSSLLKSKVPSDKSISTG-GGVGSSVPSKDTVSSSGLQVSFVGPSSLTKCA 573
Query: 484 FQMSALEDFEDLDEEGYSNGPVT-----------DISLAVSKPSDTEAITVLDKPRASVE 543
FQMS EDF D+D+E YSNGPV+ D +AV KPSDTEAITV DKP+AS++
Sbjct: 574 FQMSVQEDFVDMDDEEYSNGPVSAKSFERREKVDDSLVAVGKPSDTEAITV-DKPQASIQ 633
Query: 544 VKPSTLSEMKKINDQRKSDAPVTTGKSPI-SFATASSPSITANAIVPESTSRPEITVSSE 603
KPS +SEMKKINDQ KSD PVTT KS I SF TAS S TAN I PEST+RPE SSE
Sbjct: 634 AKPSPVSEMKKINDQAKSDVPVTTEKSSIFSFPTASPSSTTANVIEPESTTRPEKIASSE 693
Query: 604 VPKTTIAPLFGFGNKLPSQTESISSAPTFTFGNKVATLANEQNAVPVVASESNVAPTQQT 663
VPK AP+FGFG KLPSQ + + S+PTFTFGNKV T NEQNAVP V SE NVAPT Q
Sbjct: 694 VPKAAAAPIFGFGEKLPSQKDPVFSSPTFTFGNKVTTSTNEQNAVPAVTSEGNVAPTLQA 753
Query: 664 SVPSTFTFGDKTTASIPENAATENGIKNVGLPLKFASPSVNEKESARVDSVSVLKAEISS 723
S P+TF FGDK T IP + ATENG G P KFAS VNEKE A+ S SV K+E SS
Sbjct: 754 SAPTTFKFGDKATFPIPASTATENGNSEAGSPFKFASSLVNEKEGAKAGSASVFKSESSS 813
Query: 724 SSIR----SFGVSKEFMSGNKAGD-KSSSAGLSVGTFENLFSSVSTSTPTPSLFSLSSPS 783
SS SFGV KE MS KAGD KSSSAGLSVGT NL S +STPTPSLFS SSP+
Sbjct: 814 SSFNCSTLSFGVPKESMS-EKAGDKKSSSAGLSVGTSGNLLLSSVSSTPTPSLFSFSSPT 873
Query: 784 TNSNLNNGSLVPTPSIVTPSIVSFSATSFSKDISNQNSSIKPSLTATPHNSEPAATASLS 843
TNSNL NGSL TPS PS + +F +I+NQNSSIKPSL A NSEP T SLS
Sbjct: 874 TNSNLINGSLGSTPS-TFPS----PSNTFPSNITNQNSSIKPSLNAATSNSEPVTTTSLS 933
Query: 844 TSSPIPSFSAAPIFKFGSPSVPSTSAPALSAPSGVGSVETKTTLETT-LGNLSGTPPSDT 903
TSSP+PSFSAAPIFKFGS SVPS+ SAPSGVGSVETKT ETT GN+SG PSDT
Sbjct: 934 TSSPMPSFSAAPIFKFGSSSVPSS-----SAPSGVGSVETKTKQETTPFGNVSGISPSDT 993
Query: 904 SAAKASSTGNSIFQFGAPA-TADSNKQPVSSTFSQGNGTAFGAPVSPASSGPASSTQSTP 963
SAAK STG+S+FQFGA + T+DSNKQP STF+ + +FGAPV PASSG ASSTQSTP
Sbjct: 994 SAAKVFSTGSSVFQFGAASTTSDSNKQPEKSTFAPVSVPSFGAPVLPASSGVASSTQSTP 1053
Query: 964 VFPFSSSSTSFGLAGNTGLSSGSSLFGSSAPASNLFTSGTTLGLASSSSSASNSVSSGAG 1023
V PFSSSSTSFGL GNTGL+SG+SL GSSAPASNLFTSG T G SSSSA+NSVSSGAG
Sbjct: 1054 VSPFSSSSTSFGLTGNTGLASGNSLVGSSAPASNLFTSGATFGF-GSSSSANNSVSSGAG 1113
Query: 1024 TSSSLSNWQSSSTPSFSTGFSSTPTGVFSFGLSSSSTTSNSAPVVFGSSSTGAA-TAPMF 1083
TSSS NWQ+SS PSFS+GF STPTG FSFGL+SSS S+S+P++FGSS+TGAA T MF
Sbjct: 1114 TSSSFFNWQASSAPSFSSGFGSTPTGGFSFGLASSSAASSSSPMLFGSSTTGAASTTSMF 1173
Query: 1084 SFTSAASSQPAFGNSTSQPAFGNSSSQPAFGNSSSQPAFGNSSSQPAFGTLSSQPAFGTS 1143
SFTSAA++ P
Sbjct: 1174 SFTSAATAAP-------------------------------------------------- 1233
Query: 1144 SSQPAFDTSSSQPAFGTSSSQPAFGTSSSQPAFGTSSSQPAFGSQPAFGSQPAFGSQPSF 1203
Sbjct: 1234 ------------------------------------------------------------ 1293
Query: 1204 GTSSSQPAFGTSSSQPAFGHLSSQPAFGNSQPAFGNSSSQPAFAISNPGFTFGSTPLANN 1263
SQPAFGT SN GFTFGSTP ANN
Sbjct: 1294 ----SQPAFGT----------------------------------SNHGFTFGSTPPANN 1301
Query: 1264 FQANTEDSMAEDGVQAVATPTPMPTFGQQPLTPPPSSGYMFGSTAPSPQAASPFQF-GNQ 1323
AN EDSMAED VQ VA+PTPMP+FGQQPLTPPPSSG++FGSTAPSP A+PFQF G+Q
Sbjct: 1354 DHANMEDSMAEDTVQTVASPTPMPSFGQQPLTPPPSSGFVFGSTAPSPLGANPFQFGGSQ 1301
Query: 1324 QNVPSPQNPSLFQASGS--FNAPSAGGSFSLGAGGGDKANRKYIRVKNSKSRRK 1355
QNVP+PQNP+ FQASGS FNA SAGGSFSLGAGGGDK+NRK+++VK SKSR+K
Sbjct: 1414 QNVPTPQNPNPFQASGSLDFNA-SAGGSFSLGAGGGDKSNRKFVKVK-SKSRKK 1301
BLAST of Sed0010208 vs. ExPASy TrEMBL
Match:
A0A6J1K059 (nuclear pore complex protein NUP1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111488998 PE=4 SV=1)
HSP 1 Score: 1351.3 bits (3496), Expect = 0.0e+00
Identity = 867/1370 (63.28%), Postives = 966/1370 (70.51%), Query Frame = 0
Query: 4 ENQEEVAADPPGVLEEKNLSLVPGIESDNTHGVTDLEQMLKEKTFTKFEIDRLTELLKSR 63
+NQEEVAAD PG E N VP I S+N HGV+DLE++LKEKTFT+FEIDRLTELLKSR
Sbjct: 94 KNQEEVAADSPGTQEGTNNDFVPSINSNNIHGVSDLEKILKEKTFTRFEIDRLTELLKSR 153
Query: 64 VADVPSGVEGRKFEQVPSKPVISYGIHERSPKFPPQDGVSSHIVPTHDMSAKVLNEDVAS 123
VADVPSGVE RKFE+VPS PVISY I E SPKFP Q+ V H+VP H ++A V +EDVAS
Sbjct: 154 VADVPSGVESRKFEKVPSTPVISYDIQEGSPKFPAQERVRPHMVPNHVVNANVPDEDVAS 213
Query: 124 PAQIAKMYMGGRPLKATPLSMASSSQKLGDSFVSGDTSKSSTLSLVPRSPGNFDVNENGF 183
PA+IAK +MG RP KATPLSM + SQK GD+F G+ SKSSTLSLVPRSPGNFDV EN F
Sbjct: 214 PAEIAKAFMGSRPPKATPLSMVAHSQKFGDTFALGNPSKSSTLSLVPRSPGNFDV-ENDF 273
Query: 184 VTPRSRGRSALYSMARTPYSRVSATPSIKNSVATIDAYSRATGSSLSQSALEQGRLLGSN 243
VTPRSRGRSALYSMAR PYSRV ATPSIKNSVAT D+Y RA+ +S SQSA EQGRLL SN
Sbjct: 274 VTPRSRGRSALYSMARMPYSRVRATPSIKNSVATTDSY-RASVTSSSQSAWEQGRLLESN 333
Query: 244 QGALKCRRSVLDEEMGSVGSIRRIRQKSNLLYPKGLSTPSSFTFIPVRGIGSETARHFLS 303
QGALK R SVLD+E+GSVG IRRIR KSNLL+PKGLS PSS T IPV GIGSET +H S
Sbjct: 334 QGALKRRSSVLDDEIGSVGPIRRIRHKSNLLFPKGLSLPSSSTSIPVSGIGSETYQHLQS 393
Query: 304 SKVHPFSSSAGKTLHPGDTKGSLSKVSADSENDMNPSSSFNQIPLRSSEMASKILEQLET 363
+KVHPFSS+AGK + +TK +LSK+SA+SEND PSSSF QIPLRSSEMA KILEQL+
Sbjct: 394 TKVHPFSSTAGKAPYSSETKRNLSKMSAESENDRTPSSSFPQIPLRSSEMALKILEQLDK 453
Query: 364 LTPQKEKSSELKLLSVRSNSPMKLSPSMLHGPALRSLEDVDSSKYLKNVEDIRSNDARDH 423
LTP KEKSSELKL SVR+NSPMKLSPSMLHGPALRSLEDVDS+KYL+NVEDIRSND RD
Sbjct: 454 LTPPKEKSSELKLHSVRNNSPMKLSPSMLHGPALRSLEDVDSAKYLENVEDIRSNDGRDL 513
Query: 424 TTLDNGKVEERSSLKFKVPNDKSISTACDGASSSGLMKDAVPSSGLQVSFVGPSSQTKCS 483
T+ N K E+ S LK +VP+DKSIST G SS KD V SSGLQVSFVGPSS TKC+
Sbjct: 514 TSKKNDKFEDSSLLKSEVPSDKSISTG-GGVGSSVPSKDTVSSSGLQVSFVGPSSLTKCA 573
Query: 484 FQMSALEDFEDLDEEGYSNGPVT-----------DISLAVSKPSDTEAITVLDKPRASVE 543
FQMS EDF D+D+E YSNGPV D +AV KPSD EAI ++DKP+AS++
Sbjct: 574 FQMSVQEDFVDMDDEEYSNGPVAAKSFERREKVDDSLVAVGKPSDNEAI-IVDKPQASIQ 633
Query: 544 VKPSTLSEMKKINDQRKSDAPVTTGKSPI-SFATASSPSITANAIVPESTSRPEITVSSE 603
KPST+SEMKKINDQ KSD PVTT KS I SF TAS S TA I PEST+RPE SE
Sbjct: 634 AKPSTVSEMKKINDQAKSDIPVTTEKSSIFSFPTASPSSTTATVIEPESTTRPEKIAFSE 693
Query: 604 VPKTTIAPLFGFGNKLPSQTESISSAPTFTFGNKVATLANEQNAVPVVASESNVAPTQQT 663
VPK +AP+FGFG K PSQ + + S+PTFTFGNKV T NEQNAVP V SE NVAPT Q
Sbjct: 694 VPKAAVAPIFGFGEKFPSQKDPVFSSPTFTFGNKVTTSTNEQNAVPAVTSEGNVAPTLQA 753
Query: 664 SVPSTFTFGDKTTASIPENAATENGIKNVGLPLKFASPSVNEKESARVDSVSVLKAEISS 723
S P+TF FGDK T IP + TENG G P KFAS VNEKE A+ S SV K+E SS
Sbjct: 754 SAPTTFKFGDKATFPIPASTTTENGNSEAGSPFKFASSLVNEKEGAKAGSASVFKSESSS 813
Query: 724 SSIRSFGVSKEFMSGNKAGD-KSSSAGLSVGTFENLFSSVSTSTPTPSLFSLSSPSTNSN 783
SSI SFGV KE MS KAGD KSSSAGLSVGT NL S +STPTPSLFS SSP+TNSN
Sbjct: 814 SSILSFGVPKELMS-EKAGDKKSSSAGLSVGTSGNLLLSSVSSTPTPSLFSFSSPTTNSN 873
Query: 784 LNNGSLVPTPSIVTPSIVSFSATSFSKDISNQNSSIKPSLTATPHNSEPAATASLSTSSP 843
L NGSL TPS PS + +F +I+NQNSSIKPSL A NSEP T SLSTSSP
Sbjct: 874 LINGSLGSTPS-TFPS----PSNTFPSNITNQNSSIKPSLNAATSNSEPVTTTSLSTSSP 933
Query: 844 IPSFSAAPIFKFGSPSVPSTSAPALSAPSGVGSVETKTTLETT-LGNLSGTPPSDTSAAK 903
+PSFSAAPIFKFGS SVPST SAP+G GSVETKT ETT GN+SG PSDTSAAK
Sbjct: 934 MPSFSAAPIFKFGSSSVPST-----SAPNGAGSVETKTKQETTPFGNVSGISPSDTSAAK 993
Query: 904 ASSTGNSIFQFGAPA-TADSNKQPVSSTFSQGNGTAFGAPVSPASSGPASSTQSTPVFPF 963
STG+S+FQFGA + T+DSNK+P STF+ + +FGAPV PASSG ASSTQSTPV PF
Sbjct: 994 VFSTGSSVFQFGAASTTSDSNKEPEKSTFAPVSVPSFGAPVLPASSGVASSTQSTPVSPF 1053
Query: 964 SSSSTSFGLAGNTGLSSGSSLFGSSAPASNLFTSGTTLGLASSSSSASNSVSSGAGTSSS 1023
SSSSTSFGL GNTGL+SG+SL GSSAPASNLF SG T G SSSSA+NSVSSGAGTSSS
Sbjct: 1054 SSSSTSFGLTGNTGLASGNSLVGSSAPASNLFASGATFGF-GSSSSANNSVSSGAGTSSS 1113
Query: 1024 LSNWQSSSTPSFSTGFSSTPTGVFSFGLSSSSTTSNSAPVVFGSSSTGAA-TAPMFSFTS 1083
NWQ+SS PSFS+GF STPTG FSFGL+SSS S+SAP++FGSSSTGAA T MFSFTS
Sbjct: 1114 FFNWQASSGPSFSSGFGSTPTGGFSFGLASSSAASSSAPMLFGSSSTGAASTTSMFSFTS 1173
Query: 1084 AASSQPAFGNSTSQPAFGNSSSQPAFGNSSSQPAFGNSSSQPAFGTLSSQPAFGTSSSQP 1143
AA++ +SSQPAFGN
Sbjct: 1174 AATA------------------------ASSQPAFGN----------------------- 1233
Query: 1144 AFDTSSSQPAFGTSSSQPAFGTSSSQPAFGTSSSQPAFGSQPAFGSQPAFGSQPSFGTSS 1203
Sbjct: 1234 ------------------------------------------------------------ 1293
Query: 1204 SQPAFGTSSSQPAFGHLSSQPAFGNSQPAFGNSSSQPAFAISNPGFTFGSTPLANNFQAN 1263
SN GFTFGSTP ANN AN
Sbjct: 1294 -----------------------------------------SNHGFTFGSTPPANNDHAN 1297
Query: 1264 TEDSMAEDGVQAVATPTPMPTFGQQPLTPPPSSGYMFGSTAPSPQAASPFQF-GNQQNVP 1323
EDSMAED VQ VA PTPMP+FGQQPLTPPPSSG+MFGSTAPSP A+PFQF G+QQNV
Sbjct: 1354 MEDSMAEDTVQTVALPTPMPSFGQQPLTPPPSSGFMFGSTAPSPLGANPFQFGGSQQNVS 1297
Query: 1324 SPQNPSLFQASGS--FNAPSAGGSFSLGAGGGDKANRKYIRVKNSKSRRK 1355
+PQNP+ FQASGS FNA SAGGSFSLGAGGGDK+NRK+++VK SKSR+K
Sbjct: 1414 TPQNPNPFQASGSLDFNA-SAGGSFSLGAGGGDKSNRKFVKVK-SKSRKK 1297
BLAST of Sed0010208 vs. TAIR 10
Match:
AT3G10650.1 (BEST Arabidopsis thaliana protein match is: nucleoporin-related (TAIR:AT5G20200.1); Has 61042 Blast hits to 31782 proteins in 2093 species: Archae - 202; Bacteria - 16480; Metazoa - 16017; Fungi - 12552; Plants - 1653; Viruses - 629; Other Eukaryotes - 13509 (source: NCBI BLink). )
HSP 1 Score: 238.4 bits (607), Expect = 3.3e-62
Identity = 398/1258 (31.64%), Postives = 582/1258 (46.26%), Query Frame = 0
Query: 17 LEEKNLSLVPGIESDNTHGVTDLEQMLKEKTFTKFEIDRLTELLKSRVADVPSGVEGRKF 76
+E+ N S+ P + G TDLE++L+ KTFT+ E+DRLT LL+S+ AD + E ++
Sbjct: 131 MEDTNASVDPPKD-----GFTDLEKILQGKTFTRSEVDRLTTLLRSKAADSSTMNEEQRN 190
Query: 77 EQVPSKPVISYGIHERSPKFPPQDGVSSHIVPTHDMSAKVLNEDVASPAQIAKMYMGGRP 136
E V HER + P +G + +V T S + L+E +ASPAQ+AK YMG RP
Sbjct: 191 E--VGMVVRHPPSHERD-RTHPDNGSMNTLVSTPPGSLRTLDECIASPAQLAKAYMGSRP 250
Query: 137 LKATPLSMASSSQK-LGDSFVSGDT---SKSSTLSLVPRSPGNFDVNENGFVTPRSRGRS 196
+ TP + Q DS T KS T+SLV + G + ENGFVTPRSRGRS
Sbjct: 251 SEVTPSMLGLRGQAGREDSVFLNRTPFPQKSPTMSLVTKPSGQRPL-ENGFVTPRSRGRS 310
Query: 197 ALYSMARTPYSRVSATPSIKNSVATIDAYSRATGSSLSQSALEQGRLLGSNQG---ALKC 256
A+YSMARTPYSR ++ I + S S E+ GS QG LK
Sbjct: 311 AVYSMARTPYSRPQSSVKIGSLF------------QASPSKWEESLPSGSRQGFQSGLKR 370
Query: 257 RRSVLDEEMGSVGSIRRIRQKSNLLYPKGLSTPSSFTFIPVRGIGSETARHFLSSKVHPF 316
R SVLD ++GSVG +RRIRQKSN L + L+ P S + + VR G E
Sbjct: 371 RSSVLDNDIGSVGPVRRIRQKSN-LSSRSLALPVSESPLSVRANGGE------------- 430
Query: 317 SSSAGKTLHPGDTKGSLSKVSADSENDMNPSSSFNQIPLRSSEMASKILEQLETLTPQKE 376
KT H S DS D+ P SSFN +P +SSEMASKIL+QL+
Sbjct: 431 -----KTTH----------TSKDSAEDI-PGSSFNLVPTKSSEMASKILQQLD------- 490
Query: 377 KSSELKLLSVRSNSPMKLSPSMLHGPALRSLEDVDSSKYLKNVEDIRSNDARDHTTLDNG 436
KL+S R SP KLSPSML GPAL+SL++V++ K+L N+ + ++N ++
Sbjct: 491 -----KLVSTREKSPSKLSPSMLRGPALKSLQNVEAPKFLGNLPEKKANS--PDSSYQKQ 550
Query: 437 KVEERSSLKFKVPNDKSISTACDGASSSGLMKDA-VPSSGLQVSFVGPSSQ---TKCSFQ 496
++ S + + + A DG S +G KD + G+ + + K SF+
Sbjct: 551 EISRESVSREVLAQSEKTGDAVDGTSKTGSSKDQDMRGKGVYMPLTNSLEEHPPKKRSFR 610
Query: 497 MSALEDFEDLDEE-GYSNGP--VTDISLAVSKPSDTEAITVLDKPRASVEVKPSTLSEMK 556
MSA EDF +LD++ G ++ P V + A ++ + +KP E PST
Sbjct: 611 MSAHEDFLELDDDLGAASTPCEVAEKQNAFEVEKSHISMPIGEKPLTPSEAMPSTSYISN 670
Query: 557 KINDQRKSDAPVTTGKS-----PISFATASSPSITANAIVPESTSRPEITVSSEVPKTTI 616
Q S+ + T ++ PI S+ + + + T + I+ +
Sbjct: 671 GDASQGTSNGSLETERNKFVAFPIEAVQQSNMASEPTSKFIQGTEKSSISSGKPTSEEKR 730
Query: 617 APLFGFGNKLPSQTESISSAPTFTFGNKVATLANEQNAVPVVASESNVAPTQQTSVPSTF 676
PL + P + ++ P +F L N+ + +++ + T T+
Sbjct: 731 IPL-----EEPKKPAAV--FPNISFSPPATGLLNQNSG---ASADIKLEKTSSTA----- 790
Query: 677 TFG-DKTTASIPENAATENGIKNVGLPLKFASPSVNEK-ESARVDSVSVLKAEISSSSIR 736
FG + A E+ T + + A+P++N SA ++V+ + S +S
Sbjct: 791 -FGVSEAWAKPTESKKTFSNSASGAESSTSAAPTLNGSIFSAGANAVTPPPSNGSLTSSP 850
Query: 737 SFGVS-KEFMSGNKAGDKSSSAGLSVGTF--ENLFSSVSTSTPTPSLFSLSSP-STNSNL 796
SF S S N GD S+ T ++F + TS + S + +SP S+ S
Sbjct: 851 SFPPSISNIPSDNSVGDMPSTVQSFAATHNSSSIFGKLPTSNDSNSQSTSASPLSSTSPF 910
Query: 797 NNGSLVPTPSIVTPSIVSFSATSFSKDISNQNSSIKPSLTATPHNSEPAATASLSTSSPI 856
G P P+ VS S+ SK+ +N++ + T A+A ST
Sbjct: 911 KFGQ--PAAPFSAPA-VSESSGQISKETEVKNATFGNTST---FKFGGMASADQSTGIVF 970
Query: 857 PSFSA----APIFKFGSPSV-------PSTSAPALSAPSGVGSVETKTTLETTLGNLSGT 916
+ SA P F FGS SV PST+ A SAP GS+ T +T G +
Sbjct: 971 GAKSAENKSRPGFVFGSSSVVGGSTLNPSTA--AASAPESSGSLIFGVTSSSTPGTETSK 1030
Query: 917 PPSDTSAAK------------------------ASSTGNSIFQFGA--PATADSNKQPVS 976
+ ++A ++STG+S+F F A A+A S++ S
Sbjct: 1031 ISASSAATNTGNSVFGTSSFAFTSSGSSMVGGVSASTGSSVFGFNAVSSASATSSQSQAS 1090
Query: 977 STFSQGNGTAFGAPVSPASSGPASSTQSTPV-FPFSSSSTSFGLAGNTGLSSGSSLFGSS 1036
+ F GN A SG +STQS P F S S+ SFGL+GN+ L+S SS FG S
Sbjct: 1091 NLFGAGN-----AQTGNTGSGTTTSTQSIPFQFGSSPSAPSFGLSGNSSLASNSSPFGFS 1150
Query: 1037 APASNLFTSGTTLGLASSSSSASNSVSSGA---GTSSSLSNWQSSSTPSFSTGF--SSTP 1096
+FTS +T L+S++SSAS+S + + GTS N +S P FS+ F SSTP
Sbjct: 1151 KSEPAVFTSVSTPQLSSTNSSASSSSTMSSPLFGTSWQAPNSSPNSGPVFSSSFTTSSTP 1210
Query: 1097 TGVFSFGLSSSSTTSNSAPVVFGSSSTGA-ATAPMFSFTSAASSQPAFGNSTSQPAFGNS 1156
T FSFG SS++T S++ +FG+S+ + +P+F F S + P QP FGNS
Sbjct: 1211 T-TFSFGGSSAATVSSTTTPIFGASTNNTPSPSPIFGFGSTPPTTP------QQPVFGNS 1270
Query: 1157 SSQPAFGNSSSQPAFGNSSSQPAFGTLSSQPAFGTSSSQPAFDT--SSSQPAFGTSSSQP 1198
+ SQ FGNS+ AFG ++ + D+ + A S P
Sbjct: 1271 -------GTPSQSLFGNSTPGFAFGAPNNGNGINNNQQVSMEDSMAEDTDQANRASMVAP 1275
BLAST of Sed0010208 vs. TAIR 10
Match:
AT1G10390.1 (Nucleoporin autopeptidase )
HSP 1 Score: 72.4 bits (176), Expect = 3.1e-12
Identity = 158/407 (38.82%), Postives = 215/407 (52.83%), Query Frame = 0
Query: 951 SSTSFGLAGNTGLSSGSSLFG--SSAPASNLFTSGTTLGLASSSSSASNSVSSGAGTSSS 1010
SS FG + T SLFG S+ ++N F T G +S+ A+ S SS G++S+
Sbjct: 4 SSNPFGQSSGTSPFGSQSLFGQTSNTSSNNPFAPATPFG--TSAPFAAQSGSSIFGSTST 63
Query: 1011 LSNWQSSSTPSFSTGFSSTPTGVFSFGLSSSSTTSNSAPVVFGSS--------STGAATA 1070
P S+ F+STPT FG SSS NS P FG+S S+G
Sbjct: 64 ----GVFGAPQTSSPFASTPT----FGASSSPAFGNSTP-AFGASPASSPFGGSSGFGQK 123
Query: 1071 PMFSFTSAASSQPAFGNST--SQPAFGNSS----------SQPAFGNSSSQPAFGNSSSQ 1130
P+ F++ S+ FGNST SQPAFGN+S + PAFG + S P+FG ++S
Sbjct: 124 PL-GFSTPQSN--PFGNSTQQSQPAFGNTSFGSSTPFGATNTPAFG-APSTPSFG-ATST 183
Query: 1131 PAFGTLSSQPAFGTSSSQPAFDTSSSQPAFGTSSSQPAFGTSSSQPAF---GTSSSQPAF 1190
P+FG SS PAFG +++ PAF S+S P+FG +++ PAFG S + PAF GT+ F
Sbjct: 184 PSFGA-SSTPAFGATNT-PAFGASNS-PSFGATNT-PAFGASPT-PAFGSTGTTFGNTGF 243
Query: 1191 GSQPAFGSQ--PAFGSQ--PSFGTSSSQPAFGTSSSQPAFGHLSSQPAFG-NSQPAFGNS 1250
GS AFG+ PAFG+ P+FG S + PAFG SS+ PAFG SS PAFG +S PAFG S
Sbjct: 244 GSGGAFGASNTPAFGASGTPAFGASGT-PAFGASST-PAFG-ASSTPAFGASSTPAFGGS 303
Query: 1251 SSQPAFAISN-PGFTFGSTPLANNFQANTEDSMAEDGVQAVATPTPMPTFGQQPLTPPPS 1310
S+ P+F SN F+FGS+P A + + A +TP+P FG + P
Sbjct: 304 ST-PSFGASNTSSFSFGSSP------AFGQSTSAFGSSAFGSTPSP---FGGAQASTPTF 363
Query: 1311 SGYMFGSTAPSPQAASPFQFGNQQ--NVPSPQNPSLFQASGSFNAPS 1325
G FG + FG QQ + P P++ +G+ P+
Sbjct: 364 GGSGFGQST----------FGGQQGGSRAVPYAPTVEADTGTGTQPA 366
BLAST of Sed0010208 vs. TAIR 10
Match:
AT1G10390.2 (Nucleoporin autopeptidase )
HSP 1 Score: 72.4 bits (176), Expect = 3.1e-12
Identity = 158/407 (38.82%), Postives = 215/407 (52.83%), Query Frame = 0
Query: 951 SSTSFGLAGNTGLSSGSSLFG--SSAPASNLFTSGTTLGLASSSSSASNSVSSGAGTSSS 1010
SS FG + T SLFG S+ ++N F T G +S+ A+ S SS G++S+
Sbjct: 4 SSNPFGQSSGTSPFGSQSLFGQTSNTSSNNPFAPATPFG--TSAPFAAQSGSSIFGSTST 63
Query: 1011 LSNWQSSSTPSFSTGFSSTPTGVFSFGLSSSSTTSNSAPVVFGSS--------STGAATA 1070
P S+ F+STPT FG SSS NS P FG+S S+G
Sbjct: 64 ----GVFGAPQTSSPFASTPT----FGASSSPAFGNSTP-AFGASPASSPFGGSSGFGQK 123
Query: 1071 PMFSFTSAASSQPAFGNST--SQPAFGNSS----------SQPAFGNSSSQPAFGNSSSQ 1130
P+ F++ S+ FGNST SQPAFGN+S + PAFG + S P+FG ++S
Sbjct: 124 PL-GFSTPQSN--PFGNSTQQSQPAFGNTSFGSSTPFGATNTPAFG-APSTPSFG-ATST 183
Query: 1131 PAFGTLSSQPAFGTSSSQPAFDTSSSQPAFGTSSSQPAFGTSSSQPAF---GTSSSQPAF 1190
P+FG SS PAFG +++ PAF S+S P+FG +++ PAFG S + PAF GT+ F
Sbjct: 184 PSFGA-SSTPAFGATNT-PAFGASNS-PSFGATNT-PAFGASPT-PAFGSTGTTFGNTGF 243
Query: 1191 GSQPAFGSQ--PAFGSQ--PSFGTSSSQPAFGTSSSQPAFGHLSSQPAFG-NSQPAFGNS 1250
GS AFG+ PAFG+ P+FG S + PAFG SS+ PAFG SS PAFG +S PAFG S
Sbjct: 244 GSGGAFGASNTPAFGASGTPAFGASGT-PAFGASST-PAFG-ASSTPAFGASSTPAFGGS 303
Query: 1251 SSQPAFAISN-PGFTFGSTPLANNFQANTEDSMAEDGVQAVATPTPMPTFGQQPLTPPPS 1310
S+ P+F SN F+FGS+P A + + A +TP+P FG + P
Sbjct: 304 ST-PSFGASNTSSFSFGSSP------AFGQSTSAFGSSAFGSTPSP---FGGAQASTPTF 363
Query: 1311 SGYMFGSTAPSPQAASPFQFGNQQ--NVPSPQNPSLFQASGSFNAPS 1325
G FG + FG QQ + P P++ +G+ P+
Sbjct: 364 GGSGFGQST----------FGGQQGGSRAVPYAPTVEADTGTGTQPA 366
BLAST of Sed0010208 vs. TAIR 10
Match:
AT2G45000.1 (structural constituent of nuclear pore )
HSP 1 Score: 63.2 bits (152), Expect = 1.9e-09
Identity = 141/391 (36.06%), Postives = 190/391 (48.59%), Query Frame = 0
Query: 946 FPFSSSSTSFGLAGNTGLSSGSSLFGSSAPASNLFTSGTTLGLASSSSSASNSVSSGAGT 1005
FPF S+ S G FGSS+ ++ S TT L+ S + +SN S+G G
Sbjct: 4 FPFGQSN-----------SVGGFSFGSSSATNSSSASSTTSPLSFSFNQSSNPSSTGFGF 63
Query: 1006 SSSLSNW-QSSSTPSFSTGFSSTPTGVFSFGLSSSSTTSNSAPVVFGSSS--TGAATAPM 1065
SS+S+ SS+TPSF G SSTP+ F FG S+SS+T + FGSS+ T A+T P
Sbjct: 64 GSSVSSTPASSTTPSFGFGASSTPS--FGFGSSASSSTPSFG---FGSSASVTPASTTPS 123
Query: 1066 FSF-TSAASSQPA---FGNSTSQPAFGNSSSQPAFGNSSSQPAFGNSSSQPAFGTLSSQP 1125
F F T+A+SS PA FG+ST+ + S P FG +S + + S FG +S
Sbjct: 124 FGFGTAASSSAPAPSLFGSSTTNASSAAPGSSP-FGFVTSSASSTATPSSSLFGAPASSA 183
Query: 1126 AFGTSSSQPAFDTSSSQPAFGTSS---SQPAFGTSSSQPAFGTSSSQPAFGSQPAFGS-Q 1185
A +SS A S S P FG+S S P+ ++S+ FG SSS A + P FG+
Sbjct: 184 ATPSSSPFGAAPASGSTPLFGSSPSLFSAPSSASASNSSLFGASSS-AATSTSPLFGAPS 243
Query: 1186 PAFGSQPSFGTSSSQPA-----FGTSSSQPAFGHLSSQPAFGNSQPAFGNSSSQPAFAIS 1245
A G+ PSF +SS P FG + S P+F SS A G+S FG + S P F S
Sbjct: 244 SATGATPSFSVASSAPGSSSSIFGATGSSPSFSVASS--ASGSSPSIFGATGSSPFFGSS 303
Query: 1246 NPGFTFGSTP--LANNFQANTEDSMAEDGVQAVATPTPMPTFGQQPLTPPPSSGYMF--- 1305
+ + GSTP A++ T S + GV + + T S+G+ F
Sbjct: 304 S---SAGSTPSLFASSSSGATTSSPSPFGVSTFNSSSTSNTSNASASPFSASTGFSFLKS 363
BLAST of Sed0010208 vs. TAIR 10
Match:
AT1G59660.1 (Nucleoporin autopeptidase )
HSP 1 Score: 60.5 bits (145), Expect = 1.2e-08
Identity = 154/413 (37.29%), Postives = 203/413 (49.15%), Query Frame = 0
Query: 900 FGAPATADSNKQPVSSTFSQGNGTAFGAPVSPASSGPASSTQSTPVFPFSSSSTSFGLAG 959
FG+ + +SS F + FG + AS+ P ++ PF +ST F
Sbjct: 2 FGSSNNNPFGQSSISSPFGTQTHSLFGQTNNNASNNPFATK------PF-GTSTPF---- 61
Query: 960 NTGLSSGSSLFGSSAPASNLFTSGTTLGLASSSSSASNSVSSGAGTSSSLSNWQSSSTPS 1019
G +GSS+FG GT+ G+ + ++S +S SS + +SSTPS
Sbjct: 62 --GAQTGSSMFG-----------GTSTGVFGAPQTSSPFGASPQAFGSSTQAFGASSTPS 121
Query: 1020 FSTG---FSSTPT-GVFSFGLSS------SSTTSNSAPV----VFGSSST-GAATAPMFS 1079
F + F T T G SFGLS+ STT S P FGSS+ GA+T P F
Sbjct: 122 FGSSNSPFGGTSTFGQKSFGLSTPQSSPFGSTTQQSQPAFGNSTFGSSTPFGASTTPAF- 181
Query: 1080 FTSAASSQPAFGNSTSQPAFGNSSSQPAFGNSSSQPAFGNSSSQPAFGTLSSQPAFGTSS 1139
ASS PAFG S + FG +++ P FG +++ FG SS+ P FG SS PAFG S+
Sbjct: 182 ---GASSTPAFGVSNTS-GFG-ATNTPGFG-ATNTTGFGGSST-PGFGA-SSTPAFG-ST 241
Query: 1140 SQPAFDTSSSQPAFGTSSSQPAFGTSSSQPAFGTSSSQPAFGSQPAFGSQPAFGSQ--PS 1199
+ PAF SS+ P FG+SSS PAFG S + PAFG+S + AFG+ F S AFGS P+
Sbjct: 242 NTPAFGASST-PLFGSSSS-PAFGASPA-PAFGSSGN--AFGNN-TFSSGGAFGSSSTPT 301
Query: 1200 FGTSSSQPAFGTSSSQPAFGHLSSQPAFGNSQPAFGNSSSQPAFAISNPGFTFGSTPLAN 1259
FG S++ AFG SSS P+F + S PAFG S AFG+SS FGST
Sbjct: 302 FGASNTS-AFGASSS-PSF-NFGSSPAFGQSTSAFGSSS-------------FGST---Q 350
Query: 1260 NFQANTEDSMAEDGVQAVATPTPMPTFGQQPLTPPPSSGYMFGSTAPSPQAAS 1296
+ +T G QA + TFG Q G AP+ AS
Sbjct: 362 SSLGSTPSPFGAQGAQASTS-----TFGGQSTIGGQQGGSRVIPYAPTTDTAS 350
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022956154.1 | 0.0e+00 | 65.74 | nuclear pore complex protein NUP1-like [Cucurbita moschata] | [more] |
KAG7032922.1 | 0.0e+00 | 65.46 | Nuclear pore complex protein NUP1 [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
XP_023527371.1 | 0.0e+00 | 65.40 | nuclear pore complex protein NUP1-like [Cucurbita pepo subsp. pepo] | [more] |
KAG6602242.1 | 0.0e+00 | 65.52 | Nuclear pore complex protein NUP1, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_038884354.1 | 0.0e+00 | 65.50 | nuclear pore complex protein NUP1-like isoform X2 [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
Q9CAF4 | 4.7e-61 | 31.64 | Nuclear pore complex protein NUP1 OS=Arabidopsis thaliana OX=3702 GN=NUP1 PE=1 S... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1GY88 | 0.0e+00 | 65.74 | nuclear pore complex protein NUP1-like OS=Cucurbita moschata OX=3662 GN=LOC11145... | [more] |
A0A6J1JSL2 | 0.0e+00 | 65.01 | nuclear pore complex protein NUP1-like OS=Cucurbita maxima OX=3661 GN=LOC1114871... | [more] |
A0A6J1FKS9 | 0.0e+00 | 63.94 | nuclear pore complex protein NUP1-like isoform X2 OS=Cucurbita moschata OX=3662 ... | [more] |
A0A6J1FF52 | 0.0e+00 | 63.76 | nuclear pore complex protein NUP1-like isoform X1 OS=Cucurbita moschata OX=3662 ... | [more] |
A0A6J1K059 | 0.0e+00 | 63.28 | nuclear pore complex protein NUP1-like isoform X2 OS=Cucurbita maxima OX=3661 GN... | [more] |