Sed0010208.2 (mRNA) Chayote v1

Overview


Name	Sed0010208.2
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	nuclear pore complex protein NUP1-like
Location	LG11: 30146569 .. 30155912 (+)
Sequence length	4978
RNA-Seq Expression	Sed0010208.2
Synteny	Sed0010208.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCAAAATTTCTCACACATTCTGAATCTCTCTCTATCTTTCTCTTTCTGCGCGTGAAGTTCTAATAAAAACCCTAATTTGCTGAATTCCCTTTTCCCCTTTTTCGACAAAATTCCTCTGAATTCCGCCATTGAAGAGAGAAGGGACCTCAACTCCGTGTTGTTCATGGCGACAGAGCGCGAGGAGATTCGCTACGAAGGCGGCGGAAGAGGTGGGAAGTTCCAGAAACGGCCGCCGAGAAGGCCGCATACGACGCCGTATGATCGCCCGCCGGCTTCTCTGCGAAACAATTCCGCCGGAAAAGGATGGCTCTCTAAGATTGTCGATCCGGCGCAGAAGCTCATCGCCTCCAGCGCGCACAGGCTTTTTTCTAGCGTGTTTCGTAAACGCCTCCCTGCTCCGCCCCCGCCCCCGCCGCCGCTGCCATTCCCGGCTTCTCCAGGTTTTTGTGCTTTTTTTTTTGAATTCGAAGGCTCTCTTAGCGGTTGTTCGAGGAAGGTTTATGGGGTTTTGTTTTTTTGCATTCTGGGTTCTTAATCGTTTCAATTTGGAGGTGTTGGTTCAAGATTGCGTAAAAAAAAAAAATTAAATTTTTTTATTTTGGTGGAGCTTGGATTTATCGTTTTGTATGCTTTTATGCTTGTTGGGCGTCTTTTCTCTGATTTAGAGCTTTAATTGTTTACCTGTCATTAGTCCTGAAGTGGTGACACTCGAAGACTTGGGGTTCGAAGGTGTGCTCTCAGCTCCCTCGAGGTTCGAGACTAACCTATAACATAAATTTGTAGATACCTCCAGGTTTAGGTGTCTCCATTCCTTTGATGTCTCCCATTTTCCGCTGGGGACGGGCGTGGTTACCCGCGGATAGTGGAAGGAAGCTCCGAATTCCTGGTTTCCATTAAAAAAATTGTTTATGTCATTAGTTTGCCTGATTCTGTGTGTGTATACTTCATTTATATCAATTTTAAGTTACAAAGCTTCCTAGTCGAATAATTTTTAGTTTTATTGGAATGTTGTTTTGTTTTCTTTACTTGGATGTCCTATGCATTGAAATTTATTCTCCAAACTTAGAAGTAGACCTTAAATGATCACGCATATAATTTTTGAGAATTGCTTTCGAATTTTTAGTTTTAAATAACTTTGTGAAAAAGATGTAGCTTGTCCTTGTATTTGTGTTTTTAAGGTCAAAGCCCAGGCCTTATGTTGCAATGCTATTAGTGCTACCCCCTTGGGTCACCAGTGTTTAATGAAACAGGAGGATCTTTGATGTTTTTGAAAGCAAAACATTTGTAGCCTCCATTTTTATGGGAAGCAAAACGTTCTGTTTTTAGATTACCATTTTTTTCTAATATTACAGTATTTTCTCTACGGTTACCCTTGAGCTCTTTATTTGTATTTCACCAACAAATGTGATATTTTTGCTTCCCATAAAAAATATAAATCTAAAAACAGAGGAATTCTACTTATTATGTTGGTTCTGTTTTCACCGCACAAAGATTTGGTAATATTGTTCTTAAAATTTGAATCTGAAATTTGATTCTAAATATTGCTCTCAAACTGATCTCTCATATAATCATCTTTTCCCATGAACCTAATGTGTAATATTTTGAATTTTACCAGTGTTGATACCCATTTAGGAAACACGATGTCATTATTTTGTTATGTAATTCAGGGTAAATATGGTTGTGCTCGCATTATTTAAAGGGGAGTTGAGGCCGTTTCTATGTTATTACTTATTAACAATTGCCTAAGAGTTTGATTGAAGTTCTGCTTTTGAAATATGGATGTCTGCTTAGTCTTTAATTATTCTATTCTTGCATTTTATACTTCCAGAGGCTAATGACGAGATGGGAAATGAGAACCAAGAAGAAGTTGCAGCTGTAAGTTTGACCTCTTAGACTCATTGATAACCTGTGCATGCGTGTCTTGTTTTTTTTCATCCAGTTCTACTATTCGTTGAAAACATGGTACACCATCATTCATCACTGAGTTTTCCTCCCTCCATGTGCATGTTTTTTTAGGCTTCAGCATTTTCTTATTCTAGACATTGCGAGACTTTTTTTCCTCTTTCTTTTGACTAATCTGGGATGCTTCTCTCTCTTTCAGATTTACAATAAAAAAGTACTTAAAAATGGTAGTTAACTTAGAACAAATATGGCATGAATGTCGAAATTTAGCACTAGTGAGAGACCTATTTTATTTTCATGAATGCATTCAATCCCCACTCCATAGTGGTCATTTATTAGGAATTAATATCTTGCTAGTTACCTTGACAACCATATGTAGTAGGGTTAGACGGTTTTTTCGTGAGAATAGTCGAGATCAGTGTTTTAAAAAGCCCAATAAAGCCCACAAAGGTGCAAGGCACGACCTTGGGGCTTCACCTCAGCAAGGCGCAGCGTGCGCCTCATGCGCCTTTTCTTTGAGTCCCCAAGCGTGTGCCTTGCGCCCTCGATGGCTTTTTTTTTCAACATACCTGTTTGTCGGAGAGAAGACATCTATAGCCGGAGAATAAGATGAGAGAAAATGAAGGGCGGGAAGTAAAATGAAAAAGAAAACCACAATGACATTTCAAATTTTGTGAATGGGGTAGAGGAAGAGTTAGTTGATTTTCATTTTATAGTTTGAACTTTTATATTTAAGAGTTATTTAAGGTTTAATAATTATTTATTTTTTTACTTGAAATTTTACTATTTATGTTCATATTGATATGTTTTGTAGTAAATATATATATTTAATACCTTTTTATATATGGTGCGCCTCCAAAATAAAGCCCGCACCTTTTTTGTTCCTTCCGTCCTAGGCTCCAGAGAGCCTTTGCGCCTTTTAAAACATTGGTCGAGATATGCGAAGGCCTAGACACTCACAAATATTAATTATGTTTTCATGACTGCATTATTTTCCTTATCCATTAAAGTGAAACTGCTTGCAAAAGTCTGAAATTCTATGTCATCATCTTTCTGATTTTCTAATTATTCTTTAGGATCCTCCGGGAGTTCTAGAAGAGAAGAATCTCAGTTTGGTTCCAGGTATCGAATCTGATAACACACATGGGGTGACTGACCTTGAGCAAATGTTGAAGGAGAAGACCTTTACCAAGTAAGTATTTGAGTGATTGTTAGTCAAGTTATTTTTTCCCTCCTATCTCAATTCTCTTAAAAGATTTTCCTTGTTTGTGTTGATATATTATTGAGTGTACTATATGAAAATATGATAATGCATTTATGGAATTACAAACATCAAATATATAAGAAGTCCTGAAATAGTATGAACGCGTTTTCCTCTTACATGTAATGTATAAACCACAATGTTGCTCTTGAATACCATGCCATTTTTTCTCCGTCTAGATGGAAATCTAGCTTCAATTTTTTTTTTAAATTTTTAAATTTTTGTTTTAGCAAGGTATGGATTTGATATTTACATGTCAAATGCTAATCACTTCACAGATTTGAGATTGATCGCTTGACTGAACTTCTGAAATCAAGAGTGGCCGATGTTCCAAGTGGGGTTGAAGGGAGGAAATTTGAACAAGTTCCTTCAAAGCCTGTTATCAGTTACGGAATACACGAAAGATCTCCAAAATTTCCACCTCAAGATGGAGTTAGCTCTCACATTGTTCCAACCCATGATATGAGTGCAAAGGTAGGATTTATTAAATGCTTTTTTGCGGATTTGGTTTCTGCATTGGTTAATATTTAGTGCCGGTTTTCCATAGTTTGCTCACACGGAAAACCATGCTTCATGTTTTTGGCCTTATTGTCTGTATAATTTTGCAGGTCCTTAATGAGGATGTTGCTTCACCGGCACAGATTGCAAAAATGTACATGGGTGGCAGACCTCTTAAAGCAACTCCGTTGAGTATGGCGTCTAGCAGTCAAAAGTTAGGGGATAGTTTTGTTTCTGGAGATACCTCGAAATCCTCTACTTTATCTCTTGTGCCAAGGTCTCCTGGGAATTTTGATGTTAATGAAAATGGTTTTGTCACCCCAAGATCTCGAGGCAGATCTGCTCTATACAGTATGGCCCGTACACCATATTCTAGAGTTAGTGCAACCCCTAGTATAAAGGTTTGTACTCCAATGAAATACATCTGCTTTATCGTTCAATTGCTTGGTAGCTTATTTATTTATTAGCCTTTTCCCTGTCTGGCCCATTCTTCAGAATAGTGTAGCAACGATAGATGCTTACAGCAGGGCAACAGGATCGTCATTGTCCCAGTCAGCGTTGGAGCAAGGGAGACTTTTGGGGTCTAATCAAGGGGTACAATTTATGAAGATGTTGTTTTATAATGTATTGTATGATTGTGTAAACTCTTAGATCATGTTATTTAATTTGGTTTCCCTTTCTGCAGGCTTTAAAATGCAGACGCTCTGTTTTAGACGAGGAAATGGGATCTGTTGGTTCTATTCGAAGAATTCGTCAGAAATCCAATCTCCTTTACCCAAAAGGTTTGAGTACACCTAGCAGTTTCACTTTTATTCCAGTAAGGGGAATTGGTTCTGAGACTGCCCGGCATTTTCTGTCTTCAAAAGTGCATCCATTTTCATCTTCTGCTGGGAAGACACTTCATCCGGGCGACACGAAGGGCAGTTTGTCCAAAGTGTCTGCAGATTCCGAAAACGACATGAATCCTAGTTCAAGTTTCAATCAAATTCCCCTCAGGTCTAGTGAGATGGCATCGAAAATATTAGAGCAGCTTGAGACATTGACCCCTCAAAAGGAGAAGTCTTCGGAACTAAAGCTGCTTAGTGTGAGAAGTAATTCACCCATGAAGTTGTCACCATCAATGTTGCATGGGCCAGCTCTTAGAAGCCTGGAAGATGTGGATTCATCCAAGTATTTGAAAAATGTTGAAGACATTCGGTCTAATGATGCTCGGGATCATACTACTCTAGATAATGGCAAGGTTGAGGAAAGGTCTTCGTTAAAATTTAAAGTTCCCAATGATAAATCTATTTCTACAGCATGTGATGGTGCAAGTTCTTCAGGTCTTATGAAGGACGCTGTACCTAGTTCTGGTCTGCAAGTTTCATTTGTTGGCCCTTCCTCACAAACAAAATGTTCTTTCCAGATGAGTGCACTTGAGGTTTGTGGCTTCTTACTTTCCAGTTCATACAATAGATCGATCATGTTGTGATTCTATCTTTAATTGATCAACCTTCCTGAAAAGAATACTAATTGCGCTGGTGTATTTTAATTTCAGCAACTATCTTTTCCATTTTTAAGCGAGTGAAATTACTTTTCAATCTTCTTCTTTTTTTTTTTTTCTTTTTGTTTTCAATCATCAATCATCTTTCAAGTTCTGTCCATGTTTTTCATTCTTTTTAGGAAAAATTATATTTTTTTAGTACATAGGTTTGGGATGTAATTTCTATTTGGTCCTTATATAATTTTAAAATCAAATACTTTTATTCAATAATGTTCAATTTTAGTCTCCAACATTTCAATAATGCTTAATTGTAGTCTTCGGATAAAAAAATCGTTAGTTACATGATGTAATGTTGACTACAATGTGGTGATGAGTTTAATCCATGTAGTTCAAAGGGGACCTTGGAGTGCTTAGGGTGATGGATTCAATCATGGAGGCCACCTAGCTAGGAATTAATTTTCTACGGGTCTCCTTGATAACCAAATGTTGTAGGGTCATGTGGTATGCTCTGTGACATTAGTTGAAGTGCATGCAAGCTGGCTCGGACAATCACGGATATAAAAAAAAATAAATGTTGATTACGATGATGAATAGAATAATTTTAAATTTCAAGATATTGATAAAGAGATTATTTTAATATCGATGTAAATTAACATTTTAAAAGAAAACTAGTATAAAAGTTCACTCAAAAAACACACTAGGACTATAATTGTGCATTATTAATATGACGGGGAAAAATGCTTGGTTTTGAAATATAGGGACCAAATAGAAACTACAGGGGCTAGAATTGTATTATGTATTTTTCCCTTCTTTTTATTTCTCACGCACACCCTCCCAAACCTGAAAAAGAAGATAACAAAGTATATCTGTCTGTGTCTGTTATATAAACCTCTATGGTTTAACTTTAATCTTCTATTGCACCTATTCTTTGCTTGGGTTTTGTGGATCGTAATGCACTCTACACGTTCCTTATAAACTCCCTTTGTTACAATGTTTATGGATCGTCTATCTCTTTTTGTTAGGATTTTGAGGATCTGGATGAAGAAGGATATTCTAATGGGCCAGTGACTGACATATCATTGGCAGTGAGTAAACCAAGTGACACTGAAGCCATCACAGTACTAGACAAACCTCGGGCTTCGGTCGAGGTTAAACCATCCACTTTATCTGAAATGAAGAAAATAAATGACCAAAGAAAATCTGATGCTCCTGTGACTACCGGAAAGAGTCCCATCTCCTTTGCAACAGCATCTTCACCTAGCATTACAGCCAATGCGATAGTTCCTGAATCAACCTCGAGACCTGAAATAACCGTTTCATCTGAGGTACCTAAAACAACCATTGCCCCTTTGTTTGGCTTTGGAAATAAGTTGCCATCACAAACGGAATCAATTTCTTCGGCCCCTACGTTTACCTTTGGTAACAAGGTTGCCACTTTAGCAAATGAACAAAATGCTGTCCCTGTTGTAGCTTCTGAAAGCAATGTTGCACCAACTCAACAAACTTCTGTTCCTTCCACATTTACATTTGGCGATAAAACTACAGCTTCTATTCCAGAAAACGCGGCTACAGAGAATGGAATTAAGAATGTTGGGTTGCCGTTGAAGTTTGCATCACCTTCAGTTAATGAAAAGGAAAGTGCTAGAGTTGATAGTGTTTCAGTTTTGAAAGCAGAGATTTCTAGCAGCAGGTCAGTTTGTTTATTTCTGTTGTTACCTTGAACTTAGAACATGTTTCTCTTGTTTTTGTGGTGATTCTTATAGTGCTTTATGAAATTTACTCGTAACTGATGTTTTGGATGGTTTTAATTGCAGCATCCGGTCGTTTGGAGTTTCGAAAGAGTTCATGTCTGGTAATAAAGCTGGTGATAAGAGTTCGAGTGCTGGTCTTTCAGTTGGTACATTTGAGAACTTGTTTTCATCTGTTTCAACATCAACGCCAACTCCCAGTTTATTTTCCTTAAGCTCCCCTAGCACTAATTCAAATCTTAATAATGGATCTCTTGTTCCTACCCCATCTATTGTCACCCCGTCTATTGTTTCCTTCTCAGCCACCTCATTTTCTAAAGATATATCAAATCAAAATTCATCCATCAAACCCTCCCTCACTGCTACCCCTCACAACAGTGAACCGGCCGCCACTGCTAGTCTTTCTACGTCTTCTCCTATCCCATCTTTTTCAGCTGCACCTATTTTCAAATTTGGGAGCCCTAGCGTTCCTTCAACTTCTGCACCAGCTTTATCAGCACCGAGTGGAGTTGGATCCGTAGAAACCAAGACCACACTAGAGACAACCCTTGGCAATTTAAGCGGCACTCCTCCAAGCGACACTTCTGCTGCTAAAGCATCTAGTACTGGAAACAGCATTTTTCAATTCGGAGCTCCAGCTACTGCAGATTCTAATAAACAACCAGTAAGTTCTACTTTTTCCCAAGGCAATGGTACTGCATTTGGTGCTCCAGTTTCGCCTGCTAGTAGTGGTCCTGCATCTTCTACTCAGAGTACGCCTGTTTTTCCATTTAGTTCATCATCTACATCATTTGGTTTGGCTGGGAATACGGGTCTGTCTTCTGGCAGTTCTCTTTTTGGTTCTTCAGCTCCAGCATCCAATTTGTTCACTTCTGGAACGACTCTCGGACTTGCTTCTTCCAGTTCGTCGGCTAGTAATTCTGTCAGCTCCGGTGCTGGCACTAGTTCAAGCTTATCTAACTGGCAATCATCCTCCACGCCATCGTTTTCTACTGGATTTAGCTCAACTCCAACTGGAGTGTTCTCCTTTGGTCTTTCATCTTCTTCGACTACTTCTAACAGTGCACCTGTCGTCTTTGGATCATCGTCCACTGGTGCAGCAACAGCCCCAATGTTCTCATTTACTTCAGCTGCATCGTCACAGCCTGCTTTTGGTAATTCAACGTCACAACCTGCTTTTGGTAATTCGTCGTCACAGCCTGCTTTTGGTAATTCGTCGTCACAGCCTGCTTTTGGTAATTCGTCGTCACAGCCTGCTTTCGGTACTTTGTCGTCACAGCCCGCTTTCGGTACTTCGTCGTCACAGCCCGCTTTCGATACTTCGTCGTCACAGCCCGCTTTCGGTACTTCGTCGTCACAGCCCGCTTTCGGTACTTCTTCGTCACAGCCCGCTTTTGGTACTTCGTCGTCACAGCCCGCTTTCGGGTCACAGCCTGCTTTCGGGTCACAGCCTGCTTTCGGGTCACAGCCTTCTTTCGGTACTTCGTCGTCACAGCCTGCTTTCGGTACTTCGTCGTCACAGCCTGCTTTCGGTCATTTGTCGTCACAGCCTGCTTTTGGTAATTCACAGCCTGCTTTTGGTAATTCGTCGTCACAGCCTGCTTTCGCTATTTCTAATCCTGGCTTCACTTTTGGTTCAACACCTCTTGCTAATAATTTTCAAGCCAACACGGAGGATAGCATGGCTGAGGATGGCGTTCAGGCAGTCGCAACGCCTACGCCAATGCCTACTTTTGGGCAACAGCCCCTCACACCACCTCCATCATCAGGTTATATGTTTGGTTCAACAGCCCCTTCTCCGCAAGCAGCAAGCCCTTTCCAATTTGGTAATCAGCAAAATGTTCCTAGCCCACAAAATCCCTCTCTATTTCAGGCTTCTGGTAGCTTCAATGCTCCCAGTGCTGGAGGGAGCTTCTCATTGGGCGCCGGTGGTGGCGACAAAGCGAACCGAAAATACATAAGAGTTAAAAACAGCAAATCACGAAGGAAGTAGGAGCAATCGAGAGAGAAGGTATTATTCAGTTTTTTTTTTTCGTGTTTCTATATCCCAGTTCTCTTTCATCTAGGAAAAAGTTACATTACCATCACGAGGAGCAGTGGAGGGATCGATCGGTATATTTGTCACCTAGATTGTTTGATTTCGACATAATATGAGGAAGCGGCGAAGCCAAGAATTGTTGCATTTAGCAAATGCTTCGGTTGGCAATTTTTTCGTGTTTCGTTGGGAGCATAAGTTCACAATTTTTGTGTTAGCTTAGCAAAATGGAAGAAGAACATTCTGTGTACTGTAGTAAGTAGTAGTCAGTGTGTCAATGTTTTTAGGTAATATCTCTCTGTGCTATGGACTCAGTTTTCCTGTAATTTGTTATTTGTAACATAAGGAAAAAGGAAATATATGCTGTTGTCCAAGAAATCATCATTTGTTGCTCTCATGGTTCTTTTTTTTCCCCA

mRNA sequence

TTCAAAATTTCTCACACATTCTGAATCTCTCTCTATCTTTCTCTTTCTGCGCGTGAAGTTCTAATAAAAACCCTAATTTGCTGAATTCCCTTTTCCCCTTTTTCGACAAAATTCCTCTGAATTCCGCCATTGAAGAGAGAAGGGACCTCAACTCCGTGTTGTTCATGGCGACAGAGCGCGAGGAGATTCGCTACGAAGGCGGCGGAAGAGGTGGGAAGTTCCAGAAACGGCCGCCGAGAAGGCCGCATACGACGCCGTATGATCGCCCGCCGGCTTCTCTGCGAAACAATTCCGCCGGAAAAGGATGGCTCTCTAAGATTGTCGATCCGGCGCAGAAGCTCATCGCCTCCAGCGCGCACAGGCTTTTTTCTAGCGTGTTTCGTAAACGCCTCCCTGCTCCGCCCCCGCCCCCGCCGCCGCTGCCATTCCCGGCTTCTCCAGAGGCTAATGACGAGATGGGAAATGAGAACCAAGAAGAAGTTGCAGCTGATCCTCCGGGAGTTCTAGAAGAGAAGAATCTCAGTTTGGTTCCAGGTATCGAATCTGATAACACACATGGGGTGACTGACCTTGAGCAAATGTTGAAGGAGAAGACCTTTACCAAATTTGAGATTGATCGCTTGACTGAACTTCTGAAATCAAGAGTGGCCGATGTTCCAAGTGGGGTTGAAGGGAGGAAATTTGAACAAGTTCCTTCAAAGCCTGTTATCAGTTACGGAATACACGAAAGATCTCCAAAATTTCCACCTCAAGATGGAGTTAGCTCTCACATTGTTCCAACCCATGATATGAGTGCAAAGGTCCTTAATGAGGATGTTGCTTCACCGGCACAGATTGCAAAAATGTACATGGGTGGCAGACCTCTTAAAGCAACTCCGTTGAGTATGGCGTCTAGCAGTCAAAAGTTAGGGGATAGTTTTGTTTCTGGAGATACCTCGAAATCCTCTACTTTATCTCTTGTGCCAAGGTCTCCTGGGAATTTTGATGTTAATGAAAATGGTTTTGTCACCCCAAGATCTCGAGGCAGATCTGCTCTATACAGTATGGCCCGTACACCATATTCTAGAGTTAGTGCAACCCCTAGTATAAAGAATAGTGTAGCAACGATAGATGCTTACAGCAGGGCAACAGGATCGTCATTGTCCCAGTCAGCGTTGGAGCAAGGGAGACTTTTGGGGTCTAATCAAGGGGCTTTAAAATGCAGACGCTCTGTTTTAGACGAGGAAATGGGATCTGTTGGTTCTATTCGAAGAATTCGTCAGAAATCCAATCTCCTTTACCCAAAAGGTTTGAGTACACCTAGCAGTTTCACTTTTATTCCAGTAAGGGGAATTGGTTCTGAGACTGCCCGGCATTTTCTGTCTTCAAAAGTGCATCCATTTTCATCTTCTGCTGGGAAGACACTTCATCCGGGCGACACGAAGGGCAGTTTGTCCAAAGTGTCTGCAGATTCCGAAAACGACATGAATCCTAGTTCAAGTTTCAATCAAATTCCCCTCAGGTCTAGTGAGATGGCATCGAAAATATTAGAGCAGCTTGAGACATTGACCCCTCAAAAGGAGAAGTCTTCGGAACTAAAGCTGCTTAGTGTGAGAAGTAATTCACCCATGAAGTTGTCACCATCAATGTTGCATGGGCCAGCTCTTAGAAGCCTGGAAGATGTGGATTCATCCAAGTATTTGAAAAATGTTGAAGACATTCGGTCTAATGATGCTCGGGATCATACTACTCTAGATAATGGCAAGGTTGAGGAAAGGTCTTCGTTAAAATTTAAAGTTCCCAATGATAAATCTATTTCTACAGCATGTGATGGTGCAAGTTCTTCAGGTCTTATGAAGGACGCTGTACCTAGTTCTGGTCTGCAAGTTTCATTTGTTGGCCCTTCCTCACAAACAAAATGTTCTTTCCAGATGAGTGCACTTGAGGATTTTGAGGATCTGGATGAAGAAGGATATTCTAATGGGCCAGTGACTGACATATCATTGGCAGTGAGTAAACCAAGTGACACTGAAGCCATCACAGTACTAGACAAACCTCGGGCTTCGGTCGAGGTTAAACCATCCACTTTATCTGAAATGAAGAAAATAAATGACCAAAGAAAATCTGATGCTCCTGTGACTACCGGAAAGAGTCCCATCTCCTTTGCAACAGCATCTTCACCTAGCATTACAGCCAATGCGATAGTTCCTGAATCAACCTCGAGACCTGAAATAACCGTTTCATCTGAGGTACCTAAAACAACCATTGCCCCTTTGTTTGGCTTTGGAAATAAGTTGCCATCACAAACGGAATCAATTTCTTCGGCCCCTACGTTTACCTTTGGTAACAAGGTTGCCACTTTAGCAAATGAACAAAATGCTGTCCCTGTTGTAGCTTCTGAAAGCAATGTTGCACCAACTCAACAAACTTCTGTTCCTTCCACATTTACATTTGGCGATAAAACTACAGCTTCTATTCCAGAAAACGCGGCTACAGAGAATGGAATTAAGAATGTTGGGTTGCCGTTGAAGTTTGCATCACCTTCAGTTAATGAAAAGGAAAGTGCTAGAGTTGATAGTGTTTCAGTTTTGAAAGCAGAGATTTCTAGCAGCAGCATCCGGTCGTTTGGAGTTTCGAAAGAGTTCATGTCTGGTAATAAAGCTGGTGATAAGAGTTCGAGTGCTGGTCTTTCAGTTGGTACATTTGAGAACTTGTTTTCATCTGTTTCAACATCAACGCCAACTCCCAGTTTATTTTCCTTAAGCTCCCCTAGCACTAATTCAAATCTTAATAATGGATCTCTTGTTCCTACCCCATCTATTGTCACCCCGTCTATTGTTTCCTTCTCAGCCACCTCATTTTCTAAAGATATATCAAATCAAAATTCATCCATCAAACCCTCCCTCACTGCTACCCCTCACAACAGTGAACCGGCCGCCACTGCTAGTCTTTCTACGTCTTCTCCTATCCCATCTTTTTCAGCTGCACCTATTTTCAAATTTGGGAGCCCTAGCGTTCCTTCAACTTCTGCACCAGCTTTATCAGCACCGAGTGGAGTTGGATCCGTAGAAACCAAGACCACACTAGAGACAACCCTTGGCAATTTAAGCGGCACTCCTCCAAGCGACACTTCTGCTGCTAAAGCATCTAGTACTGGAAACAGCATTTTTCAATTCGGAGCTCCAGCTACTGCAGATTCTAATAAACAACCAGTAAGTTCTACTTTTTCCCAAGGCAATGGTACTGCATTTGGTGCTCCAGTTTCGCCTGCTAGTAGTGGTCCTGCATCTTCTACTCAGAGTACGCCTGTTTTTCCATTTAGTTCATCATCTACATCATTTGGTTTGGCTGGGAATACGGGTCTGTCTTCTGGCAGTTCTCTTTTTGGTTCTTCAGCTCCAGCATCCAATTTGTTCACTTCTGGAACGACTCTCGGACTTGCTTCTTCCAGTTCGTCGGCTAGTAATTCTGTCAGCTCCGGTGCTGGCACTAGTTCAAGCTTATCTAACTGGCAATCATCCTCCACGCCATCGTTTTCTACTGGATTTAGCTCAACTCCAACTGGAGTGTTCTCCTTTGGTCTTTCATCTTCTTCGACTACTTCTAACAGTGCACCTGTCGTCTTTGGATCATCGTCCACTGGTGCAGCAACAGCCCCAATGTTCTCATTTACTTCAGCTGCATCGTCACAGCCTGCTTTTGGTAATTCAACGTCACAACCTGCTTTTGGTAATTCGTCGTCACAGCCTGCTTTTGGTAATTCGTCGTCACAGCCTGCTTTTGGTAATTCGTCGTCACAGCCTGCTTTCGGTACTTTGTCGTCACAGCCCGCTTTCGGTACTTCGTCGTCACAGCCCGCTTTCGATACTTCGTCGTCACAGCCCGCTTTCGGTACTTCGTCGTCACAGCCCGCTTTCGGTACTTCTTCGTCACAGCCCGCTTTTGGTACTTCGTCGTCACAGCCCGCTTTCGGGTCACAGCCTGCTTTCGGGTCACAGCCTGCTTTCGGGTCACAGCCTTCTTTCGGTACTTCGTCGTCACAGCCTGCTTTCGGTACTTCGTCGTCACAGCCTGCTTTCGGTCATTTGTCGTCACAGCCTGCTTTTGGTAATTCACAGCCTGCTTTTGGTAATTCGTCGTCACAGCCTGCTTTCGCTATTTCTAATCCTGGCTTCACTTTTGGTTCAACACCTCTTGCTAATAATTTTCAAGCCAACACGGAGGATAGCATGGCTGAGGATGGCGTTCAGGCAGTCGCAACGCCTACGCCAATGCCTACTTTTGGGCAACAGCCCCTCACACCACCTCCATCATCAGGTTATATGTTTGGTTCAACAGCCCCTTCTCCGCAAGCAGCAAGCCCTTTCCAATTTGGTAATCAGCAAAATGTTCCTAGCCCACAAAATCCCTCTCTATTTCAGGCTTCTGGTAGCTTCAATGCTCCCAGTGCTGGAGGGAGCTTCTCATTGGGCGCCGGTGGTGGCGACAAAGCGAACCGAAAATACATAAGAGTTAAAAACAGCAAATCACGAAGGAAGTAGGAGCAATCGAGAGAGAAGGTATTATTCAGTTTTTTTTTTTCGTGTTTCTATATCCCAGTTCTCTTTCATCTAGGAAAAAGTTACATTACCATCACGAGGAGCAGTGGAGGGATCGATCGGTATATTTGTCACCTAGATTGTTTGATTTCGACATAATATGAGGAAGCGGCGAAGCCAAGAATTGTTGCATTTAGCAAATGCTTCGGTTGGCAATTTTTTCGTGTTTCGTTGGGAGCATAAGTTCACAATTTTTGTGTTAGCTTAGCAAAATGGAAGAAGAACATTCTGTGTACTGTAGTAAGTAGTAGTCAGTGTGTCAATGTTTTTAGGTAATATCTCTCTGTGCTATGGACTCAGTTTTCCTGTAATTTGTTATTTGTAACATAAGGAAAAAGGAAATATATGCTGTTGTCCAAGAAATCATCATTTGTTGCTCTCATGGTTCTTTTTTTTCCCCA

Coding sequence (CDS)

ATGGCGACAGAGCGCGAGGAGATTCGCTACGAAGGCGGCGGAAGAGGTGGGAAGTTCCAGAAACGGCCGCCGAGAAGGCCGCATACGACGCCGTATGATCGCCCGCCGGCTTCTCTGCGAAACAATTCCGCCGGAAAAGGATGGCTCTCTAAGATTGTCGATCCGGCGCAGAAGCTCATCGCCTCCAGCGCGCACAGGCTTTTTTCTAGCGTGTTTCGTAAACGCCTCCCTGCTCCGCCCCCGCCCCCGCCGCCGCTGCCATTCCCGGCTTCTCCAGAGGCTAATGACGAGATGGGAAATGAGAACCAAGAAGAAGTTGCAGCTGATCCTCCGGGAGTTCTAGAAGAGAAGAATCTCAGTTTGGTTCCAGGTATCGAATCTGATAACACACATGGGGTGACTGACCTTGAGCAAATGTTGAAGGAGAAGACCTTTACCAAATTTGAGATTGATCGCTTGACTGAACTTCTGAAATCAAGAGTGGCCGATGTTCCAAGTGGGGTTGAAGGGAGGAAATTTGAACAAGTTCCTTCAAAGCCTGTTATCAGTTACGGAATACACGAAAGATCTCCAAAATTTCCACCTCAAGATGGAGTTAGCTCTCACATTGTTCCAACCCATGATATGAGTGCAAAGGTCCTTAATGAGGATGTTGCTTCACCGGCACAGATTGCAAAAATGTACATGGGTGGCAGACCTCTTAAAGCAACTCCGTTGAGTATGGCGTCTAGCAGTCAAAAGTTAGGGGATAGTTTTGTTTCTGGAGATACCTCGAAATCCTCTACTTTATCTCTTGTGCCAAGGTCTCCTGGGAATTTTGATGTTAATGAAAATGGTTTTGTCACCCCAAGATCTCGAGGCAGATCTGCTCTATACAGTATGGCCCGTACACCATATTCTAGAGTTAGTGCAACCCCTAGTATAAAGAATAGTGTAGCAACGATAGATGCTTACAGCAGGGCAACAGGATCGTCATTGTCCCAGTCAGCGTTGGAGCAAGGGAGACTTTTGGGGTCTAATCAAGGGGCTTTAAAATGCAGACGCTCTGTTTTAGACGAGGAAATGGGATCTGTTGGTTCTATTCGAAGAATTCGTCAGAAATCCAATCTCCTTTACCCAAAAGGTTTGAGTACACCTAGCAGTTTCACTTTTATTCCAGTAAGGGGAATTGGTTCTGAGACTGCCCGGCATTTTCTGTCTTCAAAAGTGCATCCATTTTCATCTTCTGCTGGGAAGACACTTCATCCGGGCGACACGAAGGGCAGTTTGTCCAAAGTGTCTGCAGATTCCGAAAACGACATGAATCCTAGTTCAAGTTTCAATCAAATTCCCCTCAGGTCTAGTGAGATGGCATCGAAAATATTAGAGCAGCTTGAGACATTGACCCCTCAAAAGGAGAAGTCTTCGGAACTAAAGCTGCTTAGTGTGAGAAGTAATTCACCCATGAAGTTGTCACCATCAATGTTGCATGGGCCAGCTCTTAGAAGCCTGGAAGATGTGGATTCATCCAAGTATTTGAAAAATGTTGAAGACATTCGGTCTAATGATGCTCGGGATCATACTACTCTAGATAATGGCAAGGTTGAGGAAAGGTCTTCGTTAAAATTTAAAGTTCCCAATGATAAATCTATTTCTACAGCATGTGATGGTGCAAGTTCTTCAGGTCTTATGAAGGACGCTGTACCTAGTTCTGGTCTGCAAGTTTCATTTGTTGGCCCTTCCTCACAAACAAAATGTTCTTTCCAGATGAGTGCACTTGAGGATTTTGAGGATCTGGATGAAGAAGGATATTCTAATGGGCCAGTGACTGACATATCATTGGCAGTGAGTAAACCAAGTGACACTGAAGCCATCACAGTACTAGACAAACCTCGGGCTTCGGTCGAGGTTAAACCATCCACTTTATCTGAAATGAAGAAAATAAATGACCAAAGAAAATCTGATGCTCCTGTGACTACCGGAAAGAGTCCCATCTCCTTTGCAACAGCATCTTCACCTAGCATTACAGCCAATGCGATAGTTCCTGAATCAACCTCGAGACCTGAAATAACCGTTTCATCTGAGGTACCTAAAACAACCATTGCCCCTTTGTTTGGCTTTGGAAATAAGTTGCCATCACAAACGGAATCAATTTCTTCGGCCCCTACGTTTACCTTTGGTAACAAGGTTGCCACTTTAGCAAATGAACAAAATGCTGTCCCTGTTGTAGCTTCTGAAAGCAATGTTGCACCAACTCAACAAACTTCTGTTCCTTCCACATTTACATTTGGCGATAAAACTACAGCTTCTATTCCAGAAAACGCGGCTACAGAGAATGGAATTAAGAATGTTGGGTTGCCGTTGAAGTTTGCATCACCTTCAGTTAATGAAAAGGAAAGTGCTAGAGTTGATAGTGTTTCAGTTTTGAAAGCAGAGATTTCTAGCAGCAGCATCCGGTCGTTTGGAGTTTCGAAAGAGTTCATGTCTGGTAATAAAGCTGGTGATAAGAGTTCGAGTGCTGGTCTTTCAGTTGGTACATTTGAGAACTTGTTTTCATCTGTTTCAACATCAACGCCAACTCCCAGTTTATTTTCCTTAAGCTCCCCTAGCACTAATTCAAATCTTAATAATGGATCTCTTGTTCCTACCCCATCTATTGTCACCCCGTCTATTGTTTCCTTCTCAGCCACCTCATTTTCTAAAGATATATCAAATCAAAATTCATCCATCAAACCCTCCCTCACTGCTACCCCTCACAACAGTGAACCGGCCGCCACTGCTAGTCTTTCTACGTCTTCTCCTATCCCATCTTTTTCAGCTGCACCTATTTTCAAATTTGGGAGCCCTAGCGTTCCTTCAACTTCTGCACCAGCTTTATCAGCACCGAGTGGAGTTGGATCCGTAGAAACCAAGACCACACTAGAGACAACCCTTGGCAATTTAAGCGGCACTCCTCCAAGCGACACTTCTGCTGCTAAAGCATCTAGTACTGGAAACAGCATTTTTCAATTCGGAGCTCCAGCTACTGCAGATTCTAATAAACAACCAGTAAGTTCTACTTTTTCCCAAGGCAATGGTACTGCATTTGGTGCTCCAGTTTCGCCTGCTAGTAGTGGTCCTGCATCTTCTACTCAGAGTACGCCTGTTTTTCCATTTAGTTCATCATCTACATCATTTGGTTTGGCTGGGAATACGGGTCTGTCTTCTGGCAGTTCTCTTTTTGGTTCTTCAGCTCCAGCATCCAATTTGTTCACTTCTGGAACGACTCTCGGACTTGCTTCTTCCAGTTCGTCGGCTAGTAATTCTGTCAGCTCCGGTGCTGGCACTAGTTCAAGCTTATCTAACTGGCAATCATCCTCCACGCCATCGTTTTCTACTGGATTTAGCTCAACTCCAACTGGAGTGTTCTCCTTTGGTCTTTCATCTTCTTCGACTACTTCTAACAGTGCACCTGTCGTCTTTGGATCATCGTCCACTGGTGCAGCAACAGCCCCAATGTTCTCATTTACTTCAGCTGCATCGTCACAGCCTGCTTTTGGTAATTCAACGTCACAACCTGCTTTTGGTAATTCGTCGTCACAGCCTGCTTTTGGTAATTCGTCGTCACAGCCTGCTTTTGGTAATTCGTCGTCACAGCCTGCTTTCGGTACTTTGTCGTCACAGCCCGCTTTCGGTACTTCGTCGTCACAGCCCGCTTTCGATACTTCGTCGTCACAGCCCGCTTTCGGTACTTCGTCGTCACAGCCCGCTTTCGGTACTTCTTCGTCACAGCCCGCTTTTGGTACTTCGTCGTCACAGCCCGCTTTCGGGTCACAGCCTGCTTTCGGGTCACAGCCTGCTTTCGGGTCACAGCCTTCTTTCGGTACTTCGTCGTCACAGCCTGCTTTCGGTACTTCGTCGTCACAGCCTGCTTTCGGTCATTTGTCGTCACAGCCTGCTTTTGGTAATTCACAGCCTGCTTTTGGTAATTCGTCGTCACAGCCTGCTTTCGCTATTTCTAATCCTGGCTTCACTTTTGGTTCAACACCTCTTGCTAATAATTTTCAAGCCAACACGGAGGATAGCATGGCTGAGGATGGCGTTCAGGCAGTCGCAACGCCTACGCCAATGCCTACTTTTGGGCAACAGCCCCTCACACCACCTCCATCATCAGGTTATATGTTTGGTTCAACAGCCCCTTCTCCGCAAGCAGCAAGCCCTTTCCAATTTGGTAATCAGCAAAATGTTCCTAGCCCACAAAATCCCTCTCTATTTCAGGCTTCTGGTAGCTTCAATGCTCCCAGTGCTGGAGGGAGCTTCTCATTGGGCGCCGGTGGTGGCGACAAAGCGAACCGAAAATACATAAGAGTTAAAAACAGCAAATCACGAAGGAAGTAG

Protein sequence

MATEREEIRYEGGGRGGKFQKRPPRRPHTTPYDRPPASLRNNSAGKGWLSKIVDPAQKLIASSAHRLFSSVFRKRLPAPPPPPPPLPFPASPEANDEMGNENQEEVAADPPGVLEEKNLSLVPGIESDNTHGVTDLEQMLKEKTFTKFEIDRLTELLKSRVADVPSGVEGRKFEQVPSKPVISYGIHERSPKFPPQDGVSSHIVPTHDMSAKVLNEDVASPAQIAKMYMGGRPLKATPLSMASSSQKLGDSFVSGDTSKSSTLSLVPRSPGNFDVNENGFVTPRSRGRSALYSMARTPYSRVSATPSIKNSVATIDAYSRATGSSLSQSALEQGRLLGSNQGALKCRRSVLDEEMGSVGSIRRIRQKSNLLYPKGLSTPSSFTFIPVRGIGSETARHFLSSKVHPFSSSAGKTLHPGDTKGSLSKVSADSENDMNPSSSFNQIPLRSSEMASKILEQLETLTPQKEKSSELKLLSVRSNSPMKLSPSMLHGPALRSLEDVDSSKYLKNVEDIRSNDARDHTTLDNGKVEERSSLKFKVPNDKSISTACDGASSSGLMKDAVPSSGLQVSFVGPSSQTKCSFQMSALEDFEDLDEEGYSNGPVTDISLAVSKPSDTEAITVLDKPRASVEVKPSTLSEMKKINDQRKSDAPVTTGKSPISFATASSPSITANAIVPESTSRPEITVSSEVPKTTIAPLFGFGNKLPSQTESISSAPTFTFGNKVATLANEQNAVPVVASESNVAPTQQTSVPSTFTFGDKTTASIPENAATENGIKNVGLPLKFASPSVNEKESARVDSVSVLKAEISSSSIRSFGVSKEFMSGNKAGDKSSSAGLSVGTFENLFSSVSTSTPTPSLFSLSSPSTNSNLNNGSLVPTPSIVTPSIVSFSATSFSKDISNQNSSIKPSLTATPHNSEPAATASLSTSSPIPSFSAAPIFKFGSPSVPSTSAPALSAPSGVGSVETKTTLETTLGNLSGTPPSDTSAAKASSTGNSIFQFGAPATADSNKQPVSSTFSQGNGTAFGAPVSPASSGPASSTQSTPVFPFSSSSTSFGLAGNTGLSSGSSLFGSSAPASNLFTSGTTLGLASSSSSASNSVSSGAGTSSSLSNWQSSSTPSFSTGFSSTPTGVFSFGLSSSSTTSNSAPVVFGSSSTGAATAPMFSFTSAASSQPAFGNSTSQPAFGNSSSQPAFGNSSSQPAFGNSSSQPAFGTLSSQPAFGTSSSQPAFDTSSSQPAFGTSSSQPAFGTSSSQPAFGTSSSQPAFGSQPAFGSQPAFGSQPSFGTSSSQPAFGTSSSQPAFGHLSSQPAFGNSQPAFGNSSSQPAFAISNPGFTFGSTPLANNFQANTEDSMAEDGVQAVATPTPMPTFGQQPLTPPPSSGYMFGSTAPSPQAASPFQFGNQQNVPSPQNPSLFQASGSFNAPSAGGSFSLGAGGGDKANRKYIRVKNSKSRRK

Homology

[Close]

BLAST of Sed0010208.2 vs. NCBI nr
Match: XP_022956154.1 (nuclear pore complex protein NUP1-like [Cucurbita moschata])

HSP 1 Score: 1550.4 bits (4013), Expect = 0.0e+00
Identity = 979/1466 (66.78%), Postives = 1053/1466 (71.83%), Query Frame = 0


Query: 1    MATEREEIRYEGGGRGGKFQKRPPRRPHTTPYDRPPASLRNNSAGKGWLSKIVDPAQKLI 60
            MATEREEIRYE GGRGGKFQKRP RR HTTPYDRPP +LR NSAG GWLSK+VDPAQKLI
Sbjct: 1    MATEREEIRYE-GGRGGKFQKRPLRRSHTTPYDRPPTALR-NSAGNGWLSKLVDPAQKLI 60

Query: 61   ASSAHRLFSSVFRKRLPAPPPPPPPLPFPASPEANDEMGNENQEEVAADPPGVLEEKNLS 120
             SSAHRLFSSVFRKR+   PPPPP L  P S EANDEMGNEN EEVAAD PG  E  N  
Sbjct: 61   TSSAHRLFSSVFRKRI---PPPPPSL--PVSREANDEMGNENHEEVAADLPGTQEGTNRD 120

Query: 121  LVPGIESDNTHGVTDLEQMLKEKTFTKFEIDRLTELLKSRVADVPSGVEGRKFEQVPSKP 180
              P I++DNTHGVTDLEQ+LKEKTFT+FEIDRLTELLKSRV DVPSG E RKFEQ PS P
Sbjct: 121  FGPSIKTDNTHGVTDLEQILKEKTFTRFEIDRLTELLKSRVVDVPSGAEERKFEQAPSTP 180

Query: 181  VISYGIHERSPKFPPQDGVSSHIVPTHDMSAKVLNEDVASPAQIAKMYMGGRPLKATPLS 240
            VISY I E SPKF  QDG+SSH+VPT  M A VL+EDVASPA+IAK YMG RP K+TPLS
Sbjct: 181  VISYEIQEGSPKFRAQDGISSHVVPTQVMRANVLDEDVASPAEIAKAYMGSRPPKSTPLS 240

Query: 241  MASSSQKLGDSFVSGDTSKSSTLSLVPRSPGNFDVNENGFVTPRSRGRSALYSMARTPYS 300
            MAS S K GDSF S + SKSS L+LVPRSPGNFDV ENGFVTPRSRGRSALY+MAR PYS
Sbjct: 241  MASHSHKFGDSFASENLSKSSALTLVPRSPGNFDVIENGFVTPRSRGRSALYNMARMPYS 300

Query: 301  RVSATPSIKNSVATIDAYSRATGSSLSQSALEQGRLLGSNQGALKCRRSVLDEEMGSVGS 360
             VSAT SIKNSVAT DAY RATGSS SQ A E+GR+LGS QGALK R SVLD+EMG VG 
Sbjct: 301  GVSATHSIKNSVATTDAY-RATGSSSSQLAWERGRVLGSKQGALKRRSSVLDDEMGHVGP 360

Query: 361  IRRIRQKSNLLYPKGLSTPSSFTFIPVRGIGSETARHFLSSKVHPFSSSAGKTLHPGDTK 420
            IRR+R KSNLLYP GLS PSS T IPV GIGSE A+ F S+KVHPFSSS+GK L+     
Sbjct: 361  IRRLRHKSNLLYPTGLSLPSSSTSIPVSGIGSENAQQFQSTKVHPFSSSSGKGLY----S 420

Query: 421  GSLSKVSADSENDMNPSSSFNQIPLRSSEMASKILEQLETLTPQKEKSSELKLLSVRSNS 480
             SLSK SA+SEND+ PSSSF+QIPLRSSEMASKILEQLE LTP K+KSS+LKLLSV +NS
Sbjct: 421  RSLSKRSAESENDVKPSSSFSQIPLRSSEMASKILEQLEKLTPPKDKSSKLKLLSVTNNS 480

Query: 481  PMKLSPSMLHGPALRSLEDVDSSKYLKNVEDIRSNDARDHTTLDNGKVEERSSLKFKVPN 540
            P KLSPSMLHGPALRSLEDVDSSKYL+NVEDI+SNDAR+ T+  N KVEE SSLK+K+P 
Sbjct: 481  PTKLSPSMLHGPALRSLEDVDSSKYLENVEDIQSNDARELTSQKNNKVEESSSLKYKLPI 540

Query: 541  DKSISTACDGASSSGLMKDAVPSSGLQVSFVGPSSQTKCSFQMSALEDFEDLDEEGYSNG 600
            +K IS A DG  S    KD V SS  QVSFVG S QTKC+FQMSA EDF D+DEEG SNG
Sbjct: 541  NKEIS-AGDGLGSPVPTKDTVLSSRPQVSFVGASPQTKCAFQMSAHEDFVDIDEEGCSNG 600

Query: 601  PVTDIS-----------LAVSKPSDTEAITVLDKPRASVEVKPSTLSEMKKINDQRKSDA 660
            PVTDIS           +A+SKPSDTEAITV DKP+AS EVKPST+SE+ KIN QRKSD 
Sbjct: 601  PVTDISFDRREKMDASLVAMSKPSDTEAITV-DKPQASAEVKPSTVSELNKINGQRKSDV 660

Query: 661  PVTTGKSPI-SFATASSPSITANAIVPESTSRPEITVSSEVPKTTIAPLFGFGNKLPSQT 720
            PVT  KSPI SFATAS PSIT NA  PEST RPE  +S E PK   AP+FGFG+KLPSQ 
Sbjct: 661  PVTAEKSPIFSFATASPPSITTNAKDPESTLRPEKNISPEAPKPANAPIFGFGDKLPSQK 720

Query: 721  ESISSAPTFTFGNKVATLANEQNAVPVVASESNVAPTQQTSVPSTFTFGDKTTASIPENA 780
            ES SSAPTF FGNK A   NEQNAVPV  SESNVAP              K T  IP NA
Sbjct: 721  ESFSSAPTFAFGNKFAPSTNEQNAVPVATSESNVAP-------------GKATFPIPANA 780

Query: 781  ATENGIKNVGLPLKFASPSVNEKESARVDSVSVLKAEISSSSIRSFGVSKEFMSGNKAGD 840
            ATENG KN G P KFASP VNEKESA+V S SV KAE +SSSI SFGV KE MS +KAGD
Sbjct: 781  ATENGNKNTGSPFKFASPLVNEKESAKVGSSSVFKAESNSSSILSFGVPKESMS-DKAGD 840

Query: 841  KSSSAGLSVGTFENLF-SSVSTSTPTPSLFSLSSPSTNSNLNNGSLVPTPSIVTPSIVSF 900
            KS SAGLSVGT ENLF SSVSTST  PSLFS SSPSTNSNLNNGSLV      TPSI S 
Sbjct: 841  KSLSAGLSVGTSENLFSSSVSTSTSAPSLFSFSSPSTNSNLNNGSLVS-----TPSIFSS 900

Query: 901  SATSFSKDISNQNSSIKPSLTATPHNSEPAATASLSTSSPIPSFSAAPIFKFGSPSVPST 960
             AT+FS +I+NQN SIKPSLT  P NSEPA T SLS  SP+PSFSAAPIFKFGSPSVPS+
Sbjct: 901  PATTFSNNITNQNPSIKPSLTTAPSNSEPATTTSLSMPSPVPSFSAAPIFKFGSPSVPSS 960

Query: 961  SAPALSAPSGVGSVETKTTLETTLGNLSGTPPSDTSAAKASSTGNSIFQFGAPATADSNK 1020
            SAPALSA       ETKT  ETT GNLSG PPSDTSAAK SSTG S+FQFGA AT DSNK
Sbjct: 961  SAPALSA------AETKTKQETTFGNLSGIPPSDTSAAKVSSTGGSVFQFGAAATTDSNK 1020

Query: 1021 QPVSSTFSQGNGTAFGAPVSPASSGPASSTQSTPVFPFSSSSTSFGLAGNTGLSSGSSLF 1080
            +P +ST + GN   FGAPV PA+SG ASSTQSTPV PFSSSSTSFGLA NTGLSSGSSLF
Sbjct: 1021 RPENSTSAPGNVPTFGAPVFPANSGVASSTQSTPVLPFSSSSTSFGLAANTGLSSGSSLF 1080

Query: 1081 GSSAPASNLFTSGTTLGLASSSSSASNSVSSGAGTSSSLSNWQSSSTPSFSTGFSSTPTG 1140
            GSSAPASNLF+SGTT GL  +SSSA+NSVSSGAGTSSS  NWQ+SSTPSFSTGFSSTPTG
Sbjct: 1081 GSSAPASNLFSSGTTFGLTGTSSSANNSVSSGAGTSSSFFNWQTSSTPSFSTGFSSTPTG 1140

Query: 1141 VFSFGLSSSSTTSNSAPVVFGSSSTGAATAPMFSFTSAASSQPAFGNSTSQPAFGNSSSQ 1200
             F FGLSSSS  SNS+P++FGSS+T A+T  MFSFTSAASSQPAF N             
Sbjct: 1141 GFPFGLSSSSAASNSSPMLFGSSTTSASTTSMFSFTSAASSQPAFSN------------- 1200

Query: 1201 PAFGNSSSQPAFGNSSSQPAFGTLSSQPAFGTSSSQPAFDTSSSQPAFGTSSSQPAFGTS 1260
                                                                        
Sbjct: 1201 ------------------------------------------------------------ 1260

Query: 1261 SSQPAFGTSSSQPAFGSQPAFGSQPAFGSQPSFGTSSSQPAFGTSSSQPAFGHLSSQPAF 1320
                                                                        
Sbjct: 1261 ------------------------------------------------------------ 1272

Query: 1321 GNSQPAFGNSSSQPAFAISNPGFTFGSTPLANNFQANTEDSMAEDGVQAVATPTPMPTFG 1380
                              SN GFTFGSTP ANN QAN EDSMAED VQAV  PT  PTFG
Sbjct: 1321 ------------------SNHGFTFGSTPPANNDQANMEDSMAEDTVQAVTLPT--PTFG 1272

Query: 1381 QQPLTPPPSSGYMFGSTAPSPQAASPFQFGNQQNVPSPQNPSLFQASGS--FNAPSAGGS 1440
            QQPLTPPPSSG+MFGS AP P AASPFQFG+QQN P+PQNPS F ASGS  FNA SAGGS
Sbjct: 1381 QQPLTPPPSSGFMFGSAAPPPVAASPFQFGSQQNAPTPQNPSPFHASGSLDFNA-SAGGS 1272

Query: 1441 FSLGAGGGDKANRKYIRVKNSKSRRK 1452
            FSLGAGGGDKANRKY++VK SKSR+K
Sbjct: 1441 FSLGAGGGDKANRKYVKVK-SKSRKK 1272

[Close]

BLAST of Sed0010208.2 vs. NCBI nr
Match: KAG7032922.1 (Nuclear pore complex protein NUP1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1545.8 bits (4001), Expect = 0.0e+00
Identity = 981/1475 (66.51%), Postives = 1054/1475 (71.46%), Query Frame = 0


Query: 1    MATEREEIRYEGGGRGGKFQKRPPRRPHTTPYDRPPASLRNNSAGKGWLSKIVDPAQKLI 60
            MATEREEIRYE GGRGGKFQKRP RR HTTPYDRPP +LR NSAG GWLSK+VDPAQKLI
Sbjct: 1    MATEREEIRYE-GGRGGKFQKRPLRRSHTTPYDRPPTALR-NSAGNGWLSKLVDPAQKLI 60

Query: 61   ASSAHRLFSSVFRKRLPAPPPPPPPLPFPASPEANDEMGNENQEEVAADPPGVLEEKNLS 120
             SSAHRLFSSVFRKR+   PPPPP L  P S EANDEMGNEN EEVAAD PG  E  N  
Sbjct: 61   TSSAHRLFSSVFRKRI---PPPPPSL--PVSREANDEMGNENHEEVAADLPGTQEGTNHD 120

Query: 121  LVPGIESDNTHGVTDLEQMLKEKTFT---------KFEIDRLTELLKSRVADVPSGVEGR 180
              P I++DNTHGVTDLEQ+LKEKTFT         KFEIDRLTELLKSRV DVPSG E R
Sbjct: 121  FGPSIKTDNTHGVTDLEQILKEKTFTRQVFECLLVKFEIDRLTELLKSRVVDVPSGAEER 180

Query: 181  KFEQVPSKPVISYGIHERSPKFPPQDGVSSHIVPTHDMSAKVLNEDVASPAQIAKMYMGG 240
            KFEQ PS PVISY I E SPKF  QDG+SSH+VPT  M A VL+EDVASPA+IAK YMG 
Sbjct: 181  KFEQAPSTPVISYEIQEGSPKFRAQDGISSHVVPTQVMRANVLDEDVASPAEIAKAYMGS 240

Query: 241  RPLKATPLSMASSSQKLGDSFVSGDTSKSSTLSLVPRSPGNFDVNENGFVTPRSRGRSAL 300
            RP KATPLSMAS S K GDSF S + SKSS L+LVPRSPGNFDV ENGFVTPRSRGRSAL
Sbjct: 241  RPPKATPLSMASHSHKFGDSFASENLSKSSALTLVPRSPGNFDVIENGFVTPRSRGRSAL 300

Query: 301  YSMARTPYSRVSATPSIKNSVATIDAYSRATGSSLSQSALEQGRLLGSNQGALKCRRSVL 360
            Y+MAR PYS VSAT SIKNSVAT DAY RATGSS SQ A E+GR+LGS QGALK R SVL
Sbjct: 301  YNMARMPYSGVSATHSIKNSVATTDAY-RATGSSSSQLAWERGRVLGSKQGALKRRSSVL 360

Query: 361  DEEMGSVGSIRRIRQKSNLLYPKGLSTPSSFTFIPVRGIGSETARHFLSSKVHPFSSSAG 420
            D+EMG VG IRR+R KSNLLYP GLS PSS T IPV GIGSE A+ F S+KVHPFSSS+G
Sbjct: 361  DDEMGHVGPIRRLRHKSNLLYPTGLSLPSSSTSIPVSGIGSENAQQFQSTKVHPFSSSSG 420

Query: 421  KTLHPGDTKGSLSKVSADSENDMNPSSSFNQIPLRSSEMASKILEQLETLTPQKEKSSEL 480
            K L+      SLSK SA+SEND+ PSSSF+QIPLRSSEMASKILEQLE LTP K+KSS+L
Sbjct: 421  KGLY----SRSLSKRSAESENDVKPSSSFSQIPLRSSEMASKILEQLEKLTPPKDKSSKL 480

Query: 481  KLLSVRSNSPMKLSPSMLHGPALRSLEDVDSSKYLKNVEDIRSNDARDHTTLDNGKVEER 540
            KLLSV +NSP KLSPSMLHGPALRSLEDVDSSKYL+NVEDI+SNDAR+ T+  N KVEE 
Sbjct: 481  KLLSVTNNSPTKLSPSMLHGPALRSLEDVDSSKYLENVEDIQSNDARELTSQKNNKVEES 540

Query: 541  SSLKFKVPNDKSISTACDGASSSGLMKDAVPSSGLQVSFVGPSSQTKCSFQMSALEDFED 600
            SSLK+K+P +K IS A DG  S    KD V SS  QVSFVG S QTKC+FQMSA EDF D
Sbjct: 541  SSLKYKLPINKEIS-AGDGLGSPVPTKDTVLSSRPQVSFVGASPQTKCAFQMSAHEDFVD 600

Query: 601  LDEEGYSNGPVTDIS-----------LAVSKPSDTEAITVLDKPRASVEVKPSTLSEMKK 660
            +DEEG SNGPVTDIS           +A+SKPSDTEAITV DKP+AS EVKPST+SE+ K
Sbjct: 601  IDEEGCSNGPVTDISFDRREKMDGSLVAMSKPSDTEAITV-DKPQASAEVKPSTVSELNK 660

Query: 661  INDQRKSDAPVTTGKSPI-SFATASSPSITANAIVPESTSRPEITVSSEVPKTTIAPLFG 720
            IN QRKSD PVT  KSPI SFATAS PSIT NA  PEST RPE  +S E PK   AP+FG
Sbjct: 661  INGQRKSDVPVTAVKSPIFSFATASPPSITTNAKDPESTLRPEKNISPEAPKPANAPIFG 720

Query: 721  FGNKLPSQTESISSAPTFTFGNKVATLANEQNAVPVVASESNVAPTQQTSVPSTFTFGDK 780
            FG+KLPSQ ES SSAPTF FGNK A   NEQNAVPV  SESNVAP              K
Sbjct: 721  FGDKLPSQKESFSSAPTFAFGNKFAPSTNEQNAVPVATSESNVAP-------------GK 780

Query: 781  TTASIPENAATENGIKNVGLPLKFASPSVNEKESARVDSVSVLKAEISSSSIRSFGVSKE 840
             T  IP NAATENG KN G P KFASP VNEKESA+  S SV KAE +SSSI SFGV KE
Sbjct: 781  ATFPIPANAATENGNKNTGSPFKFASPLVNEKESAKGGSSSVSKAESNSSSILSFGVPKE 840

Query: 841  FMSGNKAGDKSSSAGLSVGTFENLF-SSVSTSTPTPSLFSLSSPSTNSNLNNGSLVPTPS 900
             MS +KAGDKSSSAGLSVGT ENLF SSVSTST  PSLFS SSPSTNSNLNNGSLV    
Sbjct: 841  SMS-DKAGDKSSSAGLSVGTSENLFSSSVSTSTSAPSLFSFSSPSTNSNLNNGSLVS--- 900

Query: 901  IVTPSIVSFSATSFSKDISNQNSSIKPSLTATPHNSEPAATASLSTSSPIPSFSAAPIFK 960
              TPSI S  AT+FS +I+NQN SIKPSLTA P N EPA T SLS  SP+PSFSAAPIFK
Sbjct: 901  --TPSIFSSPATTFSNNITNQNPSIKPSLTAAPSNGEPATTTSLSMPSPVPSFSAAPIFK 960

Query: 961  FGSPSVPSTSAPALSAPSGVGSVETKTTLETTLGNLSGTPPSDTSAAKASSTGNSIFQFG 1020
            FGSPSVPS+SAPALSA       ETKT  ETT GNLSG PPSDTSAAK SSTG S+FQFG
Sbjct: 961  FGSPSVPSSSAPALSA------AETKTKQETTFGNLSGIPPSDTSAAKVSSTGGSVFQFG 1020

Query: 1021 APATADSNKQPVSSTFSQGNGTAFGAPVSPASSGPASSTQSTPVFPFSSSSTSFGLAGNT 1080
            A AT DSNK+P +ST + GN   FGAPV PA+SG ASSTQSTPV PFSSSSTSFGLA NT
Sbjct: 1021 AAATTDSNKRPENSTSASGNVPTFGAPVFPANSGVASSTQSTPVLPFSSSSTSFGLAANT 1080

Query: 1081 GLSSGSSLFGSSAPASNLFTSGTTLGLASSSSSASNSVSSGAGTSSSLSNWQSSSTPSFS 1140
            GLSSGSSLFGSSAPASNLF+SGTT GL  +SSSA+NSVSSGAGTSSS  NWQ+SSTPSFS
Sbjct: 1081 GLSSGSSLFGSSAPASNLFSSGTTFGLTGTSSSANNSVSSGAGTSSSFFNWQTSSTPSFS 1140

Query: 1141 TGFSSTPTGVFSFGLSSSSTTSNSAPVVFGSSSTGAATAPMFSFTSAASSQPAFGNSTSQ 1200
            TGF STPTG F FGLSSSS  SNS+P++FGSS+T A+T  MFSFTSAASSQPAFGN    
Sbjct: 1141 TGFGSTPTGGFPFGLSSSSAASNSSPMLFGSSTTSASTTSMFSFTSAASSQPAFGN---- 1200

Query: 1201 PAFGNSSSQPAFGNSSSQPAFGNSSSQPAFGTLSSQPAFGTSSSQPAFDTSSSQPAFGTS 1260
                                                                        
Sbjct: 1201 ------------------------------------------------------------ 1260

Query: 1261 SSQPAFGTSSSQPAFGTSSSQPAFGSQPAFGSQPAFGSQPSFGTSSSQPAFGTSSSQPAF 1320
                                                                        
Sbjct: 1261 ------------------------------------------------------------ 1281

Query: 1321 GHLSSQPAFGNSQPAFGNSSSQPAFAISNPGFTFGSTPLANNFQANTEDSMAEDGVQAVA 1380
                                       SN GFTFGSTP ANN QAN EDSMAED +QAV 
Sbjct: 1321 ---------------------------SNHGFTFGSTPPANNDQANMEDSMAEDTIQAVT 1281

Query: 1381 TPTPMPTFGQQPLTPPPSSGYMFGSTAPSPQAASPFQFGNQQNVPSPQNPSLFQASGS-- 1440
             PT  PTFGQQPLTPPPSSG+MFGS AP P AASPFQFG+QQN P+PQNPS FQASGS  
Sbjct: 1381 LPT--PTFGQQPLTPPPSSGFMFGSAAPPPVAASPFQFGSQQNAPAPQNPSPFQASGSLD 1281

Query: 1441 FNAPSAGGSFSLGAGGGDKANRKYIRVKNSKSRRK 1452
            FNA SAGGSFSLGAGGGDKANRKY++VK SKSR+K
Sbjct: 1441 FNA-SAGGSFSLGAGGGDKANRKYVKVK-SKSRKK 1281

[Close]

BLAST of Sed0010208.2 vs. NCBI nr
Match: XP_023527371.1 (nuclear pore complex protein NUP1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1539.2 bits (3984), Expect = 0.0e+00
Identity = 975/1467 (66.46%), Postives = 1052/1467 (71.71%), Query Frame = 0


Query: 1    MATEREEIRYEGGGRGGKFQKRPPRRPHTTPYDRPPASLRNNSAGKGWLSKIVDPAQKLI 60
            MATEREEIRYE GGRGGKFQKRP RR HTTPYDRPP +LR NSAG GWLSK+VDPAQKLI
Sbjct: 1    MATEREEIRYE-GGRGGKFQKRPLRRSHTTPYDRPPTALR-NSAGNGWLSKLVDPAQKLI 60

Query: 61   ASSAHRLFSSVFRKRLPAPPPPPPPLPFPASPEANDEMGNENQEEVAADPPGVLEEKNLS 120
             SSAHRLFSSVFRKR+   PPPPP L  P S EANDEMGNEN EEVAAD PG  E  N  
Sbjct: 61   TSSAHRLFSSVFRKRI---PPPPPSL--PVSREANDEMGNENHEEVAADLPGTQEGTNRD 120

Query: 121  LVPGIESDNTHGVTDLEQMLKEKTFTKFEIDRLTELLKSRVADVPSGVEGRKFEQVPSKP 180
              P I++DNTHGVTDLEQ+LKEKTFT+FEIDRLTELLKSRV DVPSGVE RKFEQ PS P
Sbjct: 121  FGPSIKTDNTHGVTDLEQILKEKTFTRFEIDRLTELLKSRVVDVPSGVEERKFEQAPSTP 180

Query: 181  VISYGIHERSPKFPPQDGVSSHIVPTHDMSAKVLNEDVASPAQIAKMYMGGRPLKATPLS 240
            VISY I E SPKF  QDG+SSH+VPT  M A VL+EDVASPA+IAK YMG RP KATPLS
Sbjct: 181  VISYEIQEGSPKFRAQDGISSHVVPTQVMRANVLDEDVASPAEIAKAYMGSRPPKATPLS 240

Query: 241  MASSSQKLGDSFVSGDTSKSSTLSLVPRSPGNFDVNENGFVTPRSRGRSALYSMARTPYS 300
            MAS S K GDSF S + SKSS L+LVPRSPGNFDV ENGFVTPRSRGRSALY+MAR PYS
Sbjct: 241  MASHSHKFGDSFASENLSKSSALTLVPRSPGNFDVIENGFVTPRSRGRSALYNMARMPYS 300

Query: 301  RVSATPSIKNSVATIDAYSRATGSSLSQSALEQGRLLGSNQGALKCRRSVLDEEMGSVGS 360
             VSAT SIKNSVAT DAY RATGSS SQ A E+GR+LGS QGALK R SVLD+EMG VG 
Sbjct: 301  GVSATHSIKNSVATTDAY-RATGSSSSQLAWERGRVLGSKQGALKRRSSVLDDEMGHVGP 360

Query: 361  IRRIRQKSNLLYPKGLSTPSSFTFIPVRGIGSETARHFLSSKVHPFSSSAGKTLHPGDTK 420
            IRR+R KSNLLYP GLS PSS T IPV GIGSE A+ F S+KVHPFSSS+GK L+     
Sbjct: 361  IRRLRHKSNLLYPTGLSLPSSSTSIPVSGIGSENAQQFQSTKVHPFSSSSGKALY----S 420

Query: 421  GSLSKVSADSENDMNPSSSFNQIPLRSSEMASKILEQLETLTPQKEKSSELKLLSVRSNS 480
             SLSK SA+SEND+ PSSSF+QIPLRSSEMASKILEQLE LTP K++SS+LKLLSV +NS
Sbjct: 421  RSLSKRSAESENDVKPSSSFSQIPLRSSEMASKILEQLEKLTPPKDRSSKLKLLSVTNNS 480

Query: 481  PMKLSPSMLHGPALRSLEDVDSSKYLKNVEDIRSNDARDHTTLDNGKVEERSSLKFKVPN 540
            P KLSPSMLHGPALRSLEDVDSSKYL+NVEDI+SNDAR+ T+  N KVEE SSLK+K+P 
Sbjct: 481  PTKLSPSMLHGPALRSLEDVDSSKYLENVEDIQSNDARELTSQKNNKVEESSSLKYKLPI 540

Query: 541  DKSISTACDGASSSGLMKDAVPSSGLQVSFVGPSSQTKCSFQMSALEDFEDLDEEGYSNG 600
            DK+IS A DG  S    KD V SS  QV+FVG S QTKC+FQMSA EDF D+DEEG SNG
Sbjct: 541  DKAIS-AGDGLGSLVPTKDTVLSSRPQVAFVGASPQTKCAFQMSAHEDFVDIDEEGCSNG 600

Query: 601  PVTDISL-----------AVSKPSDTEAITVLDKPRASVEVKPSTLSEMKKINDQRKSDA 660
            PVTDIS            A+SKP+DTEAITV DKP+AS EVKPST SE+ K+N QRKSD 
Sbjct: 601  PVTDISFDRREKMDGSLAAMSKPNDTEAITV-DKPQASAEVKPSTASELNKMNGQRKSDV 660

Query: 661  PVTTGKSPI-SFATASSPSITANAIVPESTSRPEITVSSEVPKTTIAPLFGFGNKLPSQT 720
            PV   KSPI SFATAS PSI ANA  PEST RPE  +S E PK   AP+FGFG+KLPSQ 
Sbjct: 661  PVIAEKSPIFSFATASPPSIIANAKDPESTLRPEKNISPEAPKPANAPIFGFGDKLPSQK 720

Query: 721  ESISSAPTFTFGNKVATLANEQNAVPVVASESNVAPTQQTSVPSTFTFGDKTTASIPENA 780
            ES SSAPTF FGNK A   NEQNAVPV  SESNVAP              K T  IP NA
Sbjct: 721  ESFSSAPTFAFGNKFAPSTNEQNAVPVANSESNVAP-------------GKATFPIPANA 780

Query: 781  ATENGIKNVGLPLKFASPSVNEKESARVDSVSVLKAEISSSSIRSFGVSKEFMSGNKAGD 840
            ATENG KN G P KFASP VNEKE A+V S SV KAE +SSSI SFGV KE MS +KAGD
Sbjct: 781  ATENGNKNTGSPFKFASPLVNEKERAKVGSSSVFKAESNSSSILSFGVPKESMS-DKAGD 840

Query: 841  KSSSAGLSVGTFENLF-SSVSTSTPTPSLFSLSSPSTNSNLNNGSLVPTPSIVTPSIVSF 900
            KSSSAGLSVGT ENLF SSVSTST +PSLFS SSPSTNSNLNNGSLV      TPSI S 
Sbjct: 841  KSSSAGLSVGTSENLFSSSVSTSTSSPSLFSFSSPSTNSNLNNGSLVS-----TPSIFSS 900

Query: 901  SATSFSKDISNQNSSIKPSLTATPHNSEPA-ATASLSTSSPIPSFSAAPIFKFGSPSVPS 960
             AT+FS +I+NQN SIKPSLT  P NSEPA  T SLS  SP+PSFSAAPIFKFGSPSVPS
Sbjct: 901  PATTFSNNITNQNPSIKPSLTTAPSNSEPATTTTSLSMPSPVPSFSAAPIFKFGSPSVPS 960

Query: 961  TSAPALSAPSGVGSVETKTTLETTLGNLSGTPPSDTSAAKASSTGNSIFQFGAPATADSN 1020
            +SAPALSA       ETKT  ETT GNLSG PPSDTSAAK SSTG S+FQFGA AT DSN
Sbjct: 961  SSAPALSA------AETKTKQETTFGNLSGIPPSDTSAAKVSSTGGSVFQFGAAATTDSN 1020

Query: 1021 KQPVSSTFSQGNGTAFGAPVSPASSGPASSTQSTPVFPFSSSSTSFGLAGNTGLSSGSSL 1080
            K+P +ST + GN   FGAPV PA+SG ASSTQSTPV PFSSSSTSFGLA NTGLSSGS L
Sbjct: 1021 KRPENSTSAPGNVPTFGAPVFPANSGVASSTQSTPVLPFSSSSTSFGLAANTGLSSGSYL 1080

Query: 1081 FGSSAPASNLFTSGTTLGLASSSSSASNSVSSGAGTSSSLSNWQSSSTPSFSTGFSSTPT 1140
            FGSSAPASNLF+ GTT GL ++SSSA+NSVSSGAGTSSS  NWQ+SSTPSFSTGFSSTPT
Sbjct: 1081 FGSSAPASNLFSPGTTFGLTATSSSANNSVSSGAGTSSSFFNWQTSSTPSFSTGFSSTPT 1140

Query: 1141 GVFSFGLSSSSTTSNSAPVVFGSSSTGAATAPMFSFTSAASSQPAFGNSTSQPAFGNSSS 1200
            G F FGLSSSS  SNS+P++FGSS+T A+T  MFSFTSA SSQPAFGN            
Sbjct: 1141 GGFPFGLSSSSAASNSSPMLFGSSTTSASTTSMFSFTSAVSSQPAFGN------------ 1200

Query: 1201 QPAFGNSSSQPAFGNSSSQPAFGTLSSQPAFGTSSSQPAFDTSSSQPAFGTSSSQPAFGT 1260
                                                                        
Sbjct: 1201 ------------------------------------------------------------ 1260

Query: 1261 SSSQPAFGTSSSQPAFGSQPAFGSQPAFGSQPSFGTSSSQPAFGTSSSQPAFGHLSSQPA 1320
                                                                        
Sbjct: 1261 ------------------------------------------------------------ 1273

Query: 1321 FGNSQPAFGNSSSQPAFAISNPGFTFGSTPLANNFQANTEDSMAEDGVQAVATPTPMPTF 1380
                               SN GFTFGSTP ANN QAN EDSMAED VQAV  PT  PTF
Sbjct: 1321 -------------------SNHGFTFGSTPPANNDQANMEDSMAEDTVQAVTLPT--PTF 1273

Query: 1381 GQQPLTPPPSSGYMFGSTAPSPQAASPFQFGNQQNVPSPQNPSLFQASGS--FNAPSAGG 1440
            GQQPLTPPPSSG+MFGS AP P AASPFQFG+QQN P+PQNPS F ASGS  FNA SAGG
Sbjct: 1381 GQQPLTPPPSSGFMFGSAAPPPVAASPFQFGSQQNAPTPQNPSPFHASGSLDFNA-SAGG 1273

Query: 1441 SFSLGAGGGDKANRKYIRVKNSKSRRK 1452
            SFSLGAGGGDKANRKY++VK SKSR+K
Sbjct: 1441 SFSLGAGGGDKANRKYVKVK-SKSRKK 1273

[Close]

BLAST of Sed0010208.2 vs. NCBI nr
Match: KAG6602242.1 (Nuclear pore complex protein NUP1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1538.1 bits (3981), Expect = 0.0e+00
Identity = 976/1466 (66.58%), Postives = 1051/1466 (71.69%), Query Frame = 0


Query: 1    MATEREEIRYEGGGRGGKFQKRPPRRPHTTPYDRPPASLRNNSAGKGWLSKIVDPAQKLI 60
            MATEREEIRYE GGRGGKFQKRP RR HTTPYDRPP +LR NSAG GWLSK+VDPAQKLI
Sbjct: 1    MATEREEIRYE-GGRGGKFQKRPLRRSHTTPYDRPPTALR-NSAGNGWLSKLVDPAQKLI 60

Query: 61   ASSAHRLFSSVFRKRLPAPPPPPPPLPFPASPEANDEMGNENQEEVAADPPGVLEEKNLS 120
             SSAHRLFSSVFRKR+   PPPPP L  P S EANDEMGNEN EEVAAD PG  E  N  
Sbjct: 61   TSSAHRLFSSVFRKRI---PPPPPSL--PVSREANDEMGNENHEEVAADLPGTQEGTNHD 120

Query: 121  LVPGIESDNTHGVTDLEQMLKEKTFTKFEIDRLTELLKSRVADVPSGVEGRKFEQVPSKP 180
              P I++DNTHGVTDLEQ+LKEKTFT+FEIDRLTELLKSRV DVPSG E RKFEQ PS P
Sbjct: 121  FGPSIKTDNTHGVTDLEQILKEKTFTRFEIDRLTELLKSRVVDVPSGAEERKFEQAPSTP 180

Query: 181  VISYGIHERSPKFPPQDGVSSHIVPTHDMSAKVLNEDVASPAQIAKMYMGGRPLKATPLS 240
            VISY I E SPKF  QDG+SSH+VPT  M A VL+EDVASPA+IAK YMG RP KATPLS
Sbjct: 181  VISYEIQEGSPKFRAQDGISSHVVPTQVMRANVLDEDVASPAEIAKAYMGSRPPKATPLS 240

Query: 241  MASSSQKLGDSFVSGDTSKSSTLSLVPRSPGNFDVNENGFVTPRSRGRSALYSMARTPYS 300
            MAS S K GDSF S + SKSS L+LVPRSPGNFDV ENGFVTPRSRGRSALY+MAR PYS
Sbjct: 241  MASHSHKFGDSFASENLSKSSALTLVPRSPGNFDVIENGFVTPRSRGRSALYNMARMPYS 300

Query: 301  RVSATPSIKNSVATIDAYSRATGSSLSQSALEQGRLLGSNQGALKCRRSVLDEEMGSVGS 360
             VSAT SIKNSVAT DAY RATGSS SQ A E+ R+LGS QGALK R SVLD+EMG VG 
Sbjct: 301  GVSATHSIKNSVATTDAY-RATGSSSSQFAWERVRVLGSKQGALKRRSSVLDDEMGHVGP 360

Query: 361  IRRIRQKSNLLYPKGLSTPSSFTFIPVRGIGSETARHFLSSKVHPFSSSAGKTLHPGDTK 420
            IRR+R KSNLLYP GLS PSS T IPV GIGSE A+ F S+KVHPFSSS+GK L+     
Sbjct: 361  IRRLRHKSNLLYPTGLSLPSSSTSIPVSGIGSENAQQFQSTKVHPFSSSSGKGLY----S 420

Query: 421  GSLSKVSADSENDMNPSSSFNQIPLRSSEMASKILEQLETLTPQKEKSSELKLLSVRSNS 480
             SLSK SA+SEND+ PSSSF+QIPLRSSEMASKILEQLE LTP K+KSS+LKLLSV +NS
Sbjct: 421  RSLSKRSAESENDVKPSSSFSQIPLRSSEMASKILEQLEKLTPPKDKSSKLKLLSVTNNS 480

Query: 481  PMKLSPSMLHGPALRSLEDVDSSKYLKNVEDIRSNDARDHTTLDNGKVEERSSLKFKVPN 540
            P KLSPSMLHGPALRSLEDVDSSKYL+NVEDI+SNDAR+ T+  N KVEE SSLK+K+P 
Sbjct: 481  PTKLSPSMLHGPALRSLEDVDSSKYLENVEDIQSNDARELTSQKNNKVEESSSLKYKLPI 540

Query: 541  DKSISTACDGASSSGLMKDAVPSSGLQVSFVGPSSQTKCSFQMSALEDFEDLDEEGYSNG 600
            +K IS A DG  S    KD V SS  QVSFVG S QTKC+FQMSA EDF D+DEEG SNG
Sbjct: 541  NKEIS-AGDGLGSPVPTKDTVLSSRPQVSFVGASPQTKCAFQMSAHEDFVDIDEEGCSNG 600

Query: 601  PVTDIS-----------LAVSKPSDTEAITVLDKPRASVEVKPSTLSEMKKINDQRKSDA 660
            PVTDIS           +A+SKPSDTEAITV DKP+AS EVKPST+SE+ KIN QRKSD 
Sbjct: 601  PVTDISFDRREKMDGSLVAMSKPSDTEAITV-DKPQASAEVKPSTVSELNKINGQRKSDV 660

Query: 661  PVTTGKSPI-SFATASSPSITANAIVPESTSRPEITVSSEVPKTTIAPLFGFGNKLPSQT 720
            PVT  KSPI SFATAS PSIT NA  PEST RPE  +S E PK   AP+FGFG+KLPSQ 
Sbjct: 661  PVTAVKSPIFSFATASPPSITTNAKDPESTLRPEKNISPEAPKPANAPIFGFGDKLPSQK 720

Query: 721  ESISSAPTFTFGNKVATLANEQNAVPVVASESNVAPTQQTSVPSTFTFGDKTTASIPENA 780
            ES SSAPTF FGNK A   NEQN VPV  SESNVAP              K T  IP NA
Sbjct: 721  ESFSSAPTFAFGNKFAPSTNEQNDVPVATSESNVAP-------------GKATFPIPANA 780

Query: 781  ATENGIKNVGLPLKFASPSVNEKESARVDSVSVLKAEISSSSIRSFGVSKEFMSGNKAGD 840
            ATENG KN G P KFASP VNEKESA+V S SV KAE +SSSI SFGV KE MS +KAGD
Sbjct: 781  ATENGNKNTGSPFKFASPLVNEKESAKVGSSSVSKAESNSSSILSFGVPKESMS-DKAGD 840

Query: 841  KSSSAGLSVGTFENLF-SSVSTSTPTPSLFSLSSPSTNSNLNNGSLVPTPSIVTPSIVSF 900
            KSSSAGLSVGT ENLF SSVSTST  PSLFS SSPSTNSNLNNGSLV      TPSI S 
Sbjct: 841  KSSSAGLSVGTSENLFSSSVSTSTSAPSLFSFSSPSTNSNLNNGSLVS-----TPSIFSS 900

Query: 901  SATSFSKDISNQNSSIKPSLTATPHNSEPAATASLSTSSPIPSFSAAPIFKFGSPSVPST 960
             AT+FS +I+ QN SIKPSLTA P N EPA T SLS  SP+PSFSAAPIFKFGSPSVPS+
Sbjct: 901  PATTFSNNIT-QNPSIKPSLTAAPSNGEPATTTSLSMPSPVPSFSAAPIFKFGSPSVPSS 960

Query: 961  SAPALSAPSGVGSVETKTTLETTLGNLSGTPPSDTSAAKASSTGNSIFQFGAPATADSNK 1020
            SAPALSA       ETKT  ETT GNLSG PPSDTSAAK SSTG S+FQFGA AT DSNK
Sbjct: 961  SAPALSA------AETKTKQETTFGNLSGIPPSDTSAAKVSSTGGSVFQFGAAATTDSNK 1020

Query: 1021 QPVSSTFSQGNGTAFGAPVSPASSGPASSTQSTPVFPFSSSSTSFGLAGNTGLSSGSSLF 1080
            +P +ST + GN   FGAPV PA+SG ASSTQSTPV PFSSSSTSFGLA NT LSSGSSLF
Sbjct: 1021 RPENSTSASGNVPTFGAPVFPANSGVASSTQSTPVLPFSSSSTSFGLAANTVLSSGSSLF 1080

Query: 1081 GSSAPASNLFTSGTTLGLASSSSSASNSVSSGAGTSSSLSNWQSSSTPSFSTGFSSTPTG 1140
            GSSAPASNLF+SGTT GL  ++SSA+NSVSSGAGTSSS  NWQ+SSTPSFSTGF STPTG
Sbjct: 1081 GSSAPASNLFSSGTTFGLTGTNSSANNSVSSGAGTSSSFFNWQTSSTPSFSTGFGSTPTG 1140

Query: 1141 VFSFGLSSSSTTSNSAPVVFGSSSTGAATAPMFSFTSAASSQPAFGNSTSQPAFGNSSSQ 1200
             F FGLSSSS  SNS+P++FGSS+T A+T  MFSFTSAASSQPAFGN             
Sbjct: 1141 GFPFGLSSSSAASNSSPMLFGSSTTSASTTSMFSFTSAASSQPAFGN------------- 1200

Query: 1201 PAFGNSSSQPAFGNSSSQPAFGTLSSQPAFGTSSSQPAFDTSSSQPAFGTSSSQPAFGTS 1260
                                                                        
Sbjct: 1201 ------------------------------------------------------------ 1260

Query: 1261 SSQPAFGTSSSQPAFGSQPAFGSQPAFGSQPSFGTSSSQPAFGTSSSQPAFGHLSSQPAF 1320
                                                                        
Sbjct: 1261 ------------------------------------------------------------ 1271

Query: 1321 GNSQPAFGNSSSQPAFAISNPGFTFGSTPLANNFQANTEDSMAEDGVQAVATPTPMPTFG 1380
                              SN GFTFGSTP ANN QAN EDSMAED +QAV  PT  PTFG
Sbjct: 1321 ------------------SNHGFTFGSTPPANNDQANMEDSMAEDTIQAVTLPT--PTFG 1271

Query: 1381 QQPLTPPPSSGYMFGSTAPSPQAASPFQFGNQQNVPSPQNPSLFQASGS--FNAPSAGGS 1440
            QQPLTPPPSSG+MFGS AP P AASPFQFG+QQN P+PQNPS FQASGS  FNA SAGGS
Sbjct: 1381 QQPLTPPPSSGFMFGSAAPPPVAASPFQFGSQQNAPAPQNPSPFQASGSLDFNA-SAGGS 1271

Query: 1441 FSLGAGGGDKANRKYIRVKNSKSRRK 1452
            FSLGAGGGDKANRKY++VK SKSR+K
Sbjct: 1441 FSLGAGGGDKANRKYVKVK-SKSRKK 1271

[Close]

BLAST of Sed0010208.2 vs. NCBI nr
Match: XP_038884354.1 (nuclear pore complex protein NUP1-like isoform X2 [Benincasa hispida])

HSP 1 Score: 1537.3 bits (3979), Expect = 0.0e+00
Identity = 982/1474 (66.62%), Postives = 1065/1474 (72.25%), Query Frame = 0


Query: 1    MATEREEIRYEGGGRGGKFQKRPPRRPHTTPYDRPPASLRNNSAGKGWLSKIVDPAQKLI 60
            MATEREE+RYE GGRGGKFQKRP RR HTTPYDRPP +LR NSAGKGWLSK+VDPAQKLI
Sbjct: 1    MATEREEVRYE-GGRGGKFQKRPIRRSHTTPYDRPPTALR-NSAGKGWLSKLVDPAQKLI 60

Query: 61   ASSAHRLFSSVFRKRLPAPPPPPPPLPFPASPEANDEMGNENQEEVAADPPGVLEEKNLS 120
             SSAHRLFSSVFRKRL   PPPPP LP   S EANDEM N NQEEVAADPP   E  N+ 
Sbjct: 61   TSSAHRLFSSVFRKRL---PPPPPSLPL--SREANDEMENRNQEEVAADPPVTQEGTNVD 120

Query: 121  LVPGIESDNTHGVTDLEQMLKEKTFTKFEIDRLTELLKSRVADVPSGVEGRKFEQVPSKP 180
             VP I S+NTHGV+DLE++LKEKTFT+FEIDRLTELLKSRVADVPSGVE  K EQVPS P
Sbjct: 121  FVPSINSNNTHGVSDLEKILKEKTFTRFEIDRLTELLKSRVADVPSGVESGKLEQVPSTP 180

Query: 181  VISYGIHERSPKFP--PQDGVSSHIVPTHDMSAKVLNEDVASPAQIAKMYMGGRPLKATP 240
            VISYG  E  PKFP   QDGVS H+V TH +SA VL+EDVASPA+IAK YMG RP KATP
Sbjct: 181  VISYGKQEGCPKFPAQSQDGVSPHMVSTHVVSANVLDEDVASPAEIAKAYMGSRPPKATP 240

Query: 241  LSMASSSQKLGDSFVSGDTSKSSTLSLVPRSPGNFDVNENGFVTPRSRGRSALYSMARTP 300
            LSMAS SQK GD F  G+ SKS TLSL+PRSPGNFDV ENGFVTPRSRGRSALYSMAR P
Sbjct: 241  LSMASHSQKFGDGFSLGNPSKSPTLSLMPRSPGNFDV-ENGFVTPRSRGRSALYSMARMP 300

Query: 301  YSRVSATPSIKNSVATIDAYSRATGSSLSQSALEQGRLLGSNQGALKCRRSVLDEEMGSV 360
            YSRV ATPSIKNSVAT DAY RAT SS SQSA  QGRLLGS QGALK R SVLD+EMGSV
Sbjct: 301  YSRVRATPSIKNSVATTDAY-RATSSS-SQSAWGQGRLLGSEQGALKRRNSVLDDEMGSV 360

Query: 361  GSIRRIRQKSNLLYPKGLSTPSSFTFIPVRGIGSETARHFLSSKVHPFSSSAGKTLHPGD 420
            G IRRIR KSN L+PKGLS PSS T IPV GIGSET++H  S+KVHPFSS+ GK L+  +
Sbjct: 361  GPIRRIRHKSNHLFPKGLSLPSSSTSIPVSGIGSETSQHLQSTKVHPFSSTGGKGLYSSE 420

Query: 421  TKGSLSKVSADSENDMNPSSSFNQIPLRSSEMASKILEQLETLTPQKEKSSELKLLSVRS 480
            TK +LSK+SA+SENDM PSSSF QIPLRSSEMASKILEQL+ LTP KEKSSELKLLSVR+
Sbjct: 421  TKRNLSKMSAESENDMIPSSSFPQIPLRSSEMASKILEQLDKLTPPKEKSSELKLLSVRN 480

Query: 481  NSPMKLSPSMLHGPALRSLEDVDSSKYLKNVEDIRSNDARDHTTLDNGKVEERSSLKFKV 540
            NSP KLSPSMLHGPALRSLEDVDS+KYL+NVE IRSNDA D T+  N K EE S LKFKV
Sbjct: 481  NSPSKLSPSMLHGPALRSLEDVDSAKYLENVEGIRSNDACDLTSKKNDKFEESSPLKFKV 540

Query: 541  PNDKSISTACDGASSSGLMKDAVPSSGLQVSFVGPSSQTKCSFQMSALEDFEDLDEEGYS 600
            PNDKSIST  +G  SS + K+ V  SG QVSFVGPS QTKC+FQMSA EDF D+DEEGYS
Sbjct: 541  PNDKSISTG-NGVGSS-VPKETVSGSGQQVSFVGPSLQTKCAFQMSAHEDFVDMDEEGYS 600

Query: 601  NGPVTDISL----------AVSKPSDTEAITVLDKPRASVEVKPSTLSEMKKINDQRKSD 660
            NGPV DIS+          AVSKP++TEAITV DKP+AS+E KP T+S M KINDQ KSD
Sbjct: 601  NGPVADISIERQEKVNSLVAVSKPNNTEAITV-DKPQASIEAKPPTVSAMNKINDQGKSD 660

Query: 661  APVTTGKSPI-SFATASSPSITANAIVPESTSRPEITVSSEVPKTTIAPLFGFGNKLPSQ 720
             PVTT KSPI SF T SSPSITAN I PES  RPE   SSEVPK    P+FGFG K PSQ
Sbjct: 661  VPVTTEKSPIFSFPTTSSPSITANVIGPESNMRPEKIASSEVPKAATTPIFGFGEKFPSQ 720

Query: 721  TESISSAPTFTFGNKVATLANEQNAVPVVASESNVAPTQQTSVPSTFTFGDKTTASIPEN 780
             E++S APTF F NK+ T  NEQNA+PVV SE NV PTQQ S P+TF FGDK T  IP N
Sbjct: 721  KEAVSFAPTFAFVNKITTSTNEQNAIPVVTSEGNVQPTQQASAPTTFKFGDKATFPIPAN 780

Query: 781  AATENGIKNVGLPLKFASPSVNEKESARV-DSVSVLKAEISSSSIRSFGVSKEFMSGNKA 840
            AATENG KN G PL FASP VNEKE A+   S SV KAE SSSSI SFGV KE MS  KA
Sbjct: 781  AATENGNKNEGSPL-FASPLVNEKEGAKEGGSASVFKAESSSSSIPSFGVPKESMS-EKA 840

Query: 841  GDKSSSAGLSVGTFENLFS---SVSTSTPTPSLFSLSSPSTNSNLNNGSLV-PTPSIVTP 900
            GDKSSSAG +VGT  +LFS   S S STPT  LFS SSPSTNSNLNNGSLV  TPS  TP
Sbjct: 841  GDKSSSAGFAVGTSGSLFSSSVSTSISTPTSGLFSFSSPSTNSNLNNGSLVSTTPSFPTP 900

Query: 901  SIVSFSATSFSKDISNQNSSIKPSLTATPHNSEPAATASLSTSSPIPSFSAAPIFKFGSP 960
                  AT+FS +I+NQNSSIKPS  A   NSEP  T SL TSS +PSFSAAPI KFGS 
Sbjct: 901  ------ATTFSNNITNQNSSIKPSFNAAASNSEPVTTTSLPTSSLMPSFSAAPISKFGSS 960

Query: 961  SVPSTSAPALSAPSGVGSVETKTTLETTLGNLSGTPPSDTSAAKASSTGNSIFQFGAPAT 1020
            SVPSTSAPALSAPSGVGS+E+KT  ETT GNLSG PPSD SA K SSTG+S+FQFGA +T
Sbjct: 961  SVPSTSAPALSAPSGVGSIESKTKQETTFGNLSGIPPSDLSAVKVSSTGSSVFQFGAAST 1020

Query: 1021 -ADSNKQPVSSTFSQGNGTAFGAPVSPASSGPASSTQSTPVFPFSSSSTSFGLAGNTGLS 1080
             +DSNK+P +STF+  N   FGA  SP SSG ASSTQSTPV  F+SSSTSFGL GNTGL+
Sbjct: 1021 PSDSNKRPANSTFTPSNVPTFGASFSPVSSGLASSTQSTPVLQFNSSSTSFGLTGNTGLA 1080

Query: 1081 SGSSLFGSSAPASNLFTSGTTLGLASSSSSASNSVSSGAGTSSSLSNWQSSSTPSFSTGF 1140
            SGSSLFGSSAPASNLF SG T GLASSSSS +NSVSS AGTSSS  NWQ SSTPSFSTGF
Sbjct: 1081 SGSSLFGSSAPASNLFASGPTFGLASSSSSVNNSVSSSAGTSSSFFNWQPSSTPSFSTGF 1140

Query: 1141 SSTPTGVFSFGLSSSSTTSNSAPVVFGSSSTGAATAPMFSFTSAASSQPAFGNSTSQPAF 1200
            SSTPTG FSFGLSSSS  SNSAPV+FGSSSTG+ T  MFSFTSAA++      +TSQPAF
Sbjct: 1141 SSTPTGGFSFGLSSSSAASNSAPVLFGSSSTGSLTPSMFSFTSAATA------TTSQPAF 1200

Query: 1201 GNSSSQPAFGNSSSQPAFGNSSSQPAFGTLSSQPAFGTSSSQPAFDTSSSQPAFGTSSSQ 1260
            GN                                                          
Sbjct: 1201 GN---------------------------------------------------------- 1260

Query: 1261 PAFGTSSSQPAFGTSSSQPAFGSQPAFGSQPAFGSQPSFGTSSSQPAFGTSSSQPAFGHL 1320
                                                                        
Sbjct: 1261 ------------------------------------------------------------ 1300

Query: 1321 SSQPAFGNSQPAFGNSSSQPAFAISNPGFTFGSTPLANNFQANTEDSMAEDGVQAVATPT 1380
                                    SN GFTFGSTP ANN QAN EDSMAED VQ V   +
Sbjct: 1321 ------------------------SNHGFTFGSTPPANNDQANMEDSMAEDTVQTVT--S 1300

Query: 1381 PMPTFGQQPLTPPPSSGYMFGSTAPSPQAASPFQF-GNQQNVPSPQ-NPSLFQASGS--F 1440
            PMP+FGQQPLTPPPSSG++FGSTAP P  ASPFQF G+QQNVP+PQ NPS FQASGS  F
Sbjct: 1381 PMPSFGQQPLTPPPSSGFVFGSTAP-PLGASPFQFGGSQQNVPTPQNNPSPFQASGSLDF 1300

Query: 1441 NAPSAGGSFSLGAGGGDKANRKYIRVKNSKSRRK 1452
            NA SAGGSFSLGAGGGDK+NRK+++VK SKSR+K
Sbjct: 1441 NA-SAGGSFSLGAGGGDKSNRKFVKVK-SKSRKK 1300

[Close]

BLAST of Sed0010208.2 vs. ExPASy Swiss-Prot
Match: Q9CAF4 (Nuclear pore complex protein NUP1 OS=Arabidopsis thaliana OX=3702 GN=NUP1 PE=1 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 2.0e-78
Identity = 452/1378 (32.80%), Postives = 644/1378 (46.73%), Query Frame = 0


Query: 10   YEGG-GRGGKFQKRPPRRPHTTPYDRPPASLRN------NSAGKGWLSKIVDPAQKLIAS 69
            Y GG G GGKF+K   RR   TPYDRP  S+RN      +  G GWLSK+VDPAQ+LI  
Sbjct: 13   YGGGLGTGGKFRKPTARRSQKTPYDRPTTSVRNAGLGGGDVRGGGWLSKLVDPAQRLITY 72

Query: 70   SAHRLFSSVFRKRLPAPPPPPPPLPFPASPEANDEMGNENQEEVAADPPGVLEEKNLSLV 129
            SA RLF S+ RKRL +      PL  P   +   E G  NQE        V    NLS+ 
Sbjct: 73   SAQRLFGSLSRKRLGS---GETPLQSPEQQKQLPERG-VNQETKVGHKEDV---SNLSMK 132

Query: 130  PG-IESDNTH--------GVTDLEQMLKEKTFTKFEIDRLTELLKSRVADVPSGVEGRKF 189
             G I  ++T+        G TDLE++L+ KTFT+ E+DRLT LL+S+ AD  +  E ++ 
Sbjct: 133  NGLIRMEDTNASVDPPKDGFTDLEKILQGKTFTRSEVDRLTTLLRSKAADSSTMNEEQRN 192

Query: 190  EQVPSKPVISYGIHERSPKFPPQDGVSSHIVPTHDMSAKVLNEDVASPAQIAKMYMGGRP 249
            E      V     HER  +  P +G  + +V T   S + L+E +ASPAQ+AK YMG RP
Sbjct: 193  E--VGMVVRHPPSHERD-RTHPDNGSMNTLVSTPPGSLRTLDECIASPAQLAKAYMGSRP 252

Query: 250  LKATPLSMASSSQK-LGDSFVSGDT---SKSSTLSLVPRSPGNFDVNENGFVTPRSRGRS 309
             + TP  +    Q    DS     T    KS T+SLV +  G   + ENGFVTPRSRGRS
Sbjct: 253  SEVTPSMLGLRGQAGREDSVFLNRTPFPQKSPTMSLVTKPSGQRPL-ENGFVTPRSRGRS 312

Query: 310  ALYSMARTPYSRVSATPSIKNSVATIDAYSRATGSSLSQSALEQGRLLGSNQG---ALKC 369
            A+YSMARTPYSR  ++  I +                S S  E+    GS QG    LK 
Sbjct: 313  AVYSMARTPYSRPQSSVKIGSLF------------QASPSKWEESLPSGSRQGFQSGLKR 372

Query: 370  RRSVLDEEMGSVGSIRRIRQKSNLLYPKGLSTPSSFTFIPVRGIGSETARHFLSSKVHPF 429
            R SVLD ++GSVG +RRIRQKSN L  + L+ P S + + VR  G E             
Sbjct: 373  RSSVLDNDIGSVGPVRRIRQKSN-LSSRSLALPVSESPLSVRANGGE------------- 432

Query: 430  SSSAGKTLHPGDTKGSLSKVSADSENDMNPSSSFNQIPLRSSEMASKILEQLETLTPQKE 489
                 KT H           S DS  D+ P SSFN +P +SSEMASKIL+QL+       
Sbjct: 433  -----KTTH----------TSKDSAEDI-PGSSFNLVPTKSSEMASKILQQLD------- 492

Query: 490  KSSELKLLSVRSNSPMKLSPSMLHGPALRSLEDVDSSKYLKNVEDIRSNDARDHTTLDNG 549
                 KL+S R  SP KLSPSML GPAL+SL++V++ K+L N+ + ++N     ++    
Sbjct: 493  -----KLVSTREKSPSKLSPSMLRGPALKSLQNVEAPKFLGNLPEKKANS--PDSSYQKQ 552

Query: 550  KVEERSSLKFKVPNDKSISTACDGASSSGLMKDA-VPSSGLQVSFVGPSSQ---TKCSFQ 609
            ++   S  +  +   +    A DG S +G  KD  +   G+ +       +    K SF+
Sbjct: 553  EISRESVSREVLAQSEKTGDAVDGTSKTGSSKDQDMRGKGVYMPLTNSLEEHPPKKRSFR 612

Query: 610  MSALEDFEDLDEE-GYSNGP--VTDISLAVSKPSDTEAITVLDKPRASVEVKPSTLSEMK 669
            MSA EDF +LD++ G ++ P  V +   A        ++ + +KP    E  PST     
Sbjct: 613  MSAHEDFLELDDDLGAASTPCEVAEKQNAFEVEKSHISMPIGEKPLTPSEAMPSTSYISN 672

Query: 670  KINDQRKSDAPVTTGKS-----PISFATASSPSITANAIVPESTSRPEITVSSEVPKTTI 729
                Q  S+  + T ++     PI     S+ +    +   + T +  I+      +   
Sbjct: 673  GDASQGTSNGSLETERNKFVAFPIEAVQQSNMASEPTSKFIQGTEKSSISSGKPTSEEKR 732

Query: 730  APLFGFGNKLPSQTESISSAPTFTFGNKVATLANEQNAVPVVASESNVAPTQQTSVPSTF 789
             PL     + P +  ++   P  +F      L N+ +     +++  +  T  T+     
Sbjct: 733  IPL-----EEPKKPAAV--FPNISFSPPATGLLNQNSG---ASADIKLEKTSSTA----- 792

Query: 790  TFG-DKTTASIPENAATENGIKNVGLPLKFASPSVNEK-ESARVDSVSVLKAEISSSSIR 849
             FG  +  A   E+  T +   +       A+P++N    SA  ++V+   +  S +S  
Sbjct: 793  -FGVSEAWAKPTESKKTFSNSASGAESSTSAAPTLNGSIFSAGANAVTPPPSNGSLTSSP 852

Query: 850  SFGVS-KEFMSGNKAGDKSSSAGLSVGTF--ENLFSSVSTSTPTPSLFSLSSP-STNSNL 909
            SF  S     S N  GD  S+      T    ++F  + TS  + S  + +SP S+ S  
Sbjct: 853  SFPPSISNIPSDNSVGDMPSTVQSFAATHNSSSIFGKLPTSNDSNSQSTSASPLSSTSPF 912

Query: 910  NNGSLVPTPSIVTPSIVSFSATSFSKDISNQNSSIKPSLTATPHNSEPAATASLSTSSPI 969
              G   P      P+ VS S+   SK+   +N++   + T         A+A  ST    
Sbjct: 913  KFGQ--PAAPFSAPA-VSESSGQISKETEVKNATFGNTST---FKFGGMASADQSTGIVF 972

Query: 970  PSFSA----APIFKFGSPSV-------PSTSAPALSAPSGVGSVETKTTLETTLGNLSGT 1029
             + SA     P F FGS SV       PST+  A SAP   GS+    T  +T G  +  
Sbjct: 973  GAKSAENKSRPGFVFGSSSVVGGSTLNPSTA--AASAPESSGSLIFGVTSSSTPGTETSK 1032

Query: 1030 PPSDTSAAK------------------------ASSTGNSIFQFGA--PATADSNKQPVS 1089
              + ++A                          ++STG+S+F F A   A+A S++   S
Sbjct: 1033 ISASSAATNTGNSVFGTSSFAFTSSGSSMVGGVSASTGSSVFGFNAVSSASATSSQSQAS 1092

Query: 1090 STFSQGNGTAFGAPVSPASSGPASSTQSTPV-FPFSSSSTSFGLAGNTGLSSGSSLFGSS 1149
            + F  GN     A      SG  +STQS P  F  S S+ SFGL+GN+ L+S SS FG S
Sbjct: 1093 NLFGAGN-----AQTGNTGSGTTTSTQSIPFQFGSSPSAPSFGLSGNSSLASNSSPFGFS 1152

Query: 1150 APASNLFTSGTTLGLASSSSSASNSVSSGA---GTSSSLSNWQSSSTPSFSTGF--SSTP 1209
                 +FTS +T  L+S++SSAS+S +  +   GTS    N   +S P FS+ F  SSTP
Sbjct: 1153 KSEPAVFTSVSTPQLSSTNSSASSSSTMSSPLFGTSWQAPNSSPNSGPVFSSSFTTSSTP 1212

Query: 1210 TGVFSFGLSSSSTTSNSAPVVFGSSSTGA-ATAPMFSFTSAASSQPAFGNSTSQPAFGNS 1269
            T  FSFG SS++T S++   +FG+S+    + +P+F F S   + P       QP FGNS
Sbjct: 1213 T-TFSFGGSSAATVSSTTTPIFGASTNNTPSPSPIFGFGSTPPTTP------QQPVFGNS 1272

Query: 1270 SSQPAFGNSSSQPAFGNSSSQPAFGTLSSQPAFGTSSSQPAFDT--SSSQPAFGTSSSQP 1295
                    + SQ  FGNS+   AFG  ++      +      D+    +  A   S   P
Sbjct: 1273 -------GTPSQSLFGNSTPGFAFGAPNNGNGINNNQQVSMEDSMAEDTDQANRASMVAP 1275

[Close]

BLAST of Sed0010208.2 vs. ExPASy TrEMBL
Match: A0A6J1GY88 (nuclear pore complex protein NUP1-like OS=Cucurbita moschata OX=3662 GN=LOC111457932 PE=4 SV=1)

HSP 1 Score: 1550.4 bits (4013), Expect = 0.0e+00
Identity = 979/1466 (66.78%), Postives = 1053/1466 (71.83%), Query Frame = 0


Query: 1    MATEREEIRYEGGGRGGKFQKRPPRRPHTTPYDRPPASLRNNSAGKGWLSKIVDPAQKLI 60
            MATEREEIRYE GGRGGKFQKRP RR HTTPYDRPP +LR NSAG GWLSK+VDPAQKLI
Sbjct: 1    MATEREEIRYE-GGRGGKFQKRPLRRSHTTPYDRPPTALR-NSAGNGWLSKLVDPAQKLI 60

Query: 61   ASSAHRLFSSVFRKRLPAPPPPPPPLPFPASPEANDEMGNENQEEVAADPPGVLEEKNLS 120
             SSAHRLFSSVFRKR+   PPPPP L  P S EANDEMGNEN EEVAAD PG  E  N  
Sbjct: 61   TSSAHRLFSSVFRKRI---PPPPPSL--PVSREANDEMGNENHEEVAADLPGTQEGTNRD 120

Query: 121  LVPGIESDNTHGVTDLEQMLKEKTFTKFEIDRLTELLKSRVADVPSGVEGRKFEQVPSKP 180
              P I++DNTHGVTDLEQ+LKEKTFT+FEIDRLTELLKSRV DVPSG E RKFEQ PS P
Sbjct: 121  FGPSIKTDNTHGVTDLEQILKEKTFTRFEIDRLTELLKSRVVDVPSGAEERKFEQAPSTP 180

Query: 181  VISYGIHERSPKFPPQDGVSSHIVPTHDMSAKVLNEDVASPAQIAKMYMGGRPLKATPLS 240
            VISY I E SPKF  QDG+SSH+VPT  M A VL+EDVASPA+IAK YMG RP K+TPLS
Sbjct: 181  VISYEIQEGSPKFRAQDGISSHVVPTQVMRANVLDEDVASPAEIAKAYMGSRPPKSTPLS 240

Query: 241  MASSSQKLGDSFVSGDTSKSSTLSLVPRSPGNFDVNENGFVTPRSRGRSALYSMARTPYS 300
            MAS S K GDSF S + SKSS L+LVPRSPGNFDV ENGFVTPRSRGRSALY+MAR PYS
Sbjct: 241  MASHSHKFGDSFASENLSKSSALTLVPRSPGNFDVIENGFVTPRSRGRSALYNMARMPYS 300

Query: 301  RVSATPSIKNSVATIDAYSRATGSSLSQSALEQGRLLGSNQGALKCRRSVLDEEMGSVGS 360
             VSAT SIKNSVAT DAY RATGSS SQ A E+GR+LGS QGALK R SVLD+EMG VG 
Sbjct: 301  GVSATHSIKNSVATTDAY-RATGSSSSQLAWERGRVLGSKQGALKRRSSVLDDEMGHVGP 360

Query: 361  IRRIRQKSNLLYPKGLSTPSSFTFIPVRGIGSETARHFLSSKVHPFSSSAGKTLHPGDTK 420
            IRR+R KSNLLYP GLS PSS T IPV GIGSE A+ F S+KVHPFSSS+GK L+     
Sbjct: 361  IRRLRHKSNLLYPTGLSLPSSSTSIPVSGIGSENAQQFQSTKVHPFSSSSGKGLY----S 420

Query: 421  GSLSKVSADSENDMNPSSSFNQIPLRSSEMASKILEQLETLTPQKEKSSELKLLSVRSNS 480
             SLSK SA+SEND+ PSSSF+QIPLRSSEMASKILEQLE LTP K+KSS+LKLLSV +NS
Sbjct: 421  RSLSKRSAESENDVKPSSSFSQIPLRSSEMASKILEQLEKLTPPKDKSSKLKLLSVTNNS 480

Query: 481  PMKLSPSMLHGPALRSLEDVDSSKYLKNVEDIRSNDARDHTTLDNGKVEERSSLKFKVPN 540
            P KLSPSMLHGPALRSLEDVDSSKYL+NVEDI+SNDAR+ T+  N KVEE SSLK+K+P 
Sbjct: 481  PTKLSPSMLHGPALRSLEDVDSSKYLENVEDIQSNDARELTSQKNNKVEESSSLKYKLPI 540

Query: 541  DKSISTACDGASSSGLMKDAVPSSGLQVSFVGPSSQTKCSFQMSALEDFEDLDEEGYSNG 600
            +K IS A DG  S    KD V SS  QVSFVG S QTKC+FQMSA EDF D+DEEG SNG
Sbjct: 541  NKEIS-AGDGLGSPVPTKDTVLSSRPQVSFVGASPQTKCAFQMSAHEDFVDIDEEGCSNG 600

Query: 601  PVTDIS-----------LAVSKPSDTEAITVLDKPRASVEVKPSTLSEMKKINDQRKSDA 660
            PVTDIS           +A+SKPSDTEAITV DKP+AS EVKPST+SE+ KIN QRKSD 
Sbjct: 601  PVTDISFDRREKMDASLVAMSKPSDTEAITV-DKPQASAEVKPSTVSELNKINGQRKSDV 660

Query: 661  PVTTGKSPI-SFATASSPSITANAIVPESTSRPEITVSSEVPKTTIAPLFGFGNKLPSQT 720
            PVT  KSPI SFATAS PSIT NA  PEST RPE  +S E PK   AP+FGFG+KLPSQ 
Sbjct: 661  PVTAEKSPIFSFATASPPSITTNAKDPESTLRPEKNISPEAPKPANAPIFGFGDKLPSQK 720

Query: 721  ESISSAPTFTFGNKVATLANEQNAVPVVASESNVAPTQQTSVPSTFTFGDKTTASIPENA 780
            ES SSAPTF FGNK A   NEQNAVPV  SESNVAP              K T  IP NA
Sbjct: 721  ESFSSAPTFAFGNKFAPSTNEQNAVPVATSESNVAP-------------GKATFPIPANA 780

Query: 781  ATENGIKNVGLPLKFASPSVNEKESARVDSVSVLKAEISSSSIRSFGVSKEFMSGNKAGD 840
            ATENG KN G P KFASP VNEKESA+V S SV KAE +SSSI SFGV KE MS +KAGD
Sbjct: 781  ATENGNKNTGSPFKFASPLVNEKESAKVGSSSVFKAESNSSSILSFGVPKESMS-DKAGD 840

Query: 841  KSSSAGLSVGTFENLF-SSVSTSTPTPSLFSLSSPSTNSNLNNGSLVPTPSIVTPSIVSF 900
            KS SAGLSVGT ENLF SSVSTST  PSLFS SSPSTNSNLNNGSLV      TPSI S 
Sbjct: 841  KSLSAGLSVGTSENLFSSSVSTSTSAPSLFSFSSPSTNSNLNNGSLVS-----TPSIFSS 900

Query: 901  SATSFSKDISNQNSSIKPSLTATPHNSEPAATASLSTSSPIPSFSAAPIFKFGSPSVPST 960
             AT+FS +I+NQN SIKPSLT  P NSEPA T SLS  SP+PSFSAAPIFKFGSPSVPS+
Sbjct: 901  PATTFSNNITNQNPSIKPSLTTAPSNSEPATTTSLSMPSPVPSFSAAPIFKFGSPSVPSS 960

Query: 961  SAPALSAPSGVGSVETKTTLETTLGNLSGTPPSDTSAAKASSTGNSIFQFGAPATADSNK 1020
            SAPALSA       ETKT  ETT GNLSG PPSDTSAAK SSTG S+FQFGA AT DSNK
Sbjct: 961  SAPALSA------AETKTKQETTFGNLSGIPPSDTSAAKVSSTGGSVFQFGAAATTDSNK 1020

Query: 1021 QPVSSTFSQGNGTAFGAPVSPASSGPASSTQSTPVFPFSSSSTSFGLAGNTGLSSGSSLF 1080
            +P +ST + GN   FGAPV PA+SG ASSTQSTPV PFSSSSTSFGLA NTGLSSGSSLF
Sbjct: 1021 RPENSTSAPGNVPTFGAPVFPANSGVASSTQSTPVLPFSSSSTSFGLAANTGLSSGSSLF 1080

Query: 1081 GSSAPASNLFTSGTTLGLASSSSSASNSVSSGAGTSSSLSNWQSSSTPSFSTGFSSTPTG 1140
            GSSAPASNLF+SGTT GL  +SSSA+NSVSSGAGTSSS  NWQ+SSTPSFSTGFSSTPTG
Sbjct: 1081 GSSAPASNLFSSGTTFGLTGTSSSANNSVSSGAGTSSSFFNWQTSSTPSFSTGFSSTPTG 1140

Query: 1141 VFSFGLSSSSTTSNSAPVVFGSSSTGAATAPMFSFTSAASSQPAFGNSTSQPAFGNSSSQ 1200
             F FGLSSSS  SNS+P++FGSS+T A+T  MFSFTSAASSQPAF N             
Sbjct: 1141 GFPFGLSSSSAASNSSPMLFGSSTTSASTTSMFSFTSAASSQPAFSN------------- 1200

Query: 1201 PAFGNSSSQPAFGNSSSQPAFGTLSSQPAFGTSSSQPAFDTSSSQPAFGTSSSQPAFGTS 1260
                                                                        
Sbjct: 1201 ------------------------------------------------------------ 1260

Query: 1261 SSQPAFGTSSSQPAFGSQPAFGSQPAFGSQPSFGTSSSQPAFGTSSSQPAFGHLSSQPAF 1320
                                                                        
Sbjct: 1261 ------------------------------------------------------------ 1272

Query: 1321 GNSQPAFGNSSSQPAFAISNPGFTFGSTPLANNFQANTEDSMAEDGVQAVATPTPMPTFG 1380
                              SN GFTFGSTP ANN QAN EDSMAED VQAV  PT  PTFG
Sbjct: 1321 ------------------SNHGFTFGSTPPANNDQANMEDSMAEDTVQAVTLPT--PTFG 1272

Query: 1381 QQPLTPPPSSGYMFGSTAPSPQAASPFQFGNQQNVPSPQNPSLFQASGS--FNAPSAGGS 1440
            QQPLTPPPSSG+MFGS AP P AASPFQFG+QQN P+PQNPS F ASGS  FNA SAGGS
Sbjct: 1381 QQPLTPPPSSGFMFGSAAPPPVAASPFQFGSQQNAPTPQNPSPFHASGSLDFNA-SAGGS 1272

Query: 1441 FSLGAGGGDKANRKYIRVKNSKSRRK 1452
            FSLGAGGGDKANRKY++VK SKSR+K
Sbjct: 1441 FSLGAGGGDKANRKYVKVK-SKSRKK 1272

[Close]

BLAST of Sed0010208.2 vs. ExPASy TrEMBL
Match: A0A6J1JSL2 (nuclear pore complex protein NUP1-like OS=Cucurbita maxima OX=3661 GN=LOC111487168 PE=4 SV=1)

HSP 1 Score: 1515.4 bits (3922), Expect = 0.0e+00
Identity = 971/1469 (66.10%), Postives = 1047/1469 (71.27%), Query Frame = 0


Query: 1    MATEREEIRYEGGGRGGKFQKRPPRRPHTTPYDRPPASLRNNSAGKGWLSKIVDPAQKLI 60
            MATEREEIRYE GGRGGKFQKRP RR HTTPYDRPP +LR NSAG GWLSK+VDPAQKLI
Sbjct: 1    MATEREEIRYE-GGRGGKFQKRPLRRSHTTPYDRPPTALR-NSAGNGWLSKLVDPAQKLI 60

Query: 61   ASSAHRLFSSVFRKRLPAPPPPPPPLPFPASPEANDEMGNENQEEVAADPPGVLEEKNLS 120
             SSAHRLFSSVFRKR+   PPPPP L  P S EANDEMGNEN EEVAAD  G  +E N  
Sbjct: 61   TSSAHRLFSSVFRKRI---PPPPPSL--PVSREANDEMGNENHEEVAADLSGT-QEGNCD 120

Query: 121  LVPGIESDNTHGVTDLEQMLKEKTFTKFEIDRLTELLKSRVADVPSGVEGRKFEQVPSKP 180
              P I++DNTHGVTDLEQ+LKEKTFT+FEIDRLTELLKSRV DVPSGVE RKFE   S P
Sbjct: 121  FGPSIKTDNTHGVTDLEQILKEKTFTRFEIDRLTELLKSRVVDVPSGVEERKFEHASSTP 180

Query: 181  VISYGIHERSPKFPPQDGVSSHIVPTHDMSAKVLNEDVASPAQIAKMYMGGRPLKATPLS 240
            VISY I E SPKF  QDG+SSH+VPT  M A VL+EDVASPA+IAK +MG RP KATPLS
Sbjct: 181  VISYEIQEGSPKFRAQDGISSHVVPTQVMRANVLDEDVASPAEIAKAFMGSRPPKATPLS 240

Query: 241  MASSSQKLGDSFVSGDTSKSSTLSLVPRSPGNFDVNENGFVTPRSRGRSALYSMARTPYS 300
            MAS S K  D+F S + SKSS L+LVPRSPGNFDV ENGFVTPRSRGRSALY+MAR PYS
Sbjct: 241  MASHSHKFRDNFASENLSKSSALTLVPRSPGNFDVIENGFVTPRSRGRSALYNMARMPYS 300

Query: 301  RVSATPSIKNSVATIDAYSRATGSSLSQSALEQGRLLGSNQGALKCRRSVLDEEMGSVGS 360
             VSAT SIKNSVAT DAY RATGSS SQ ALE+GR+LGS QGALK R SVLD+EMG VG 
Sbjct: 301  GVSATHSIKNSVATTDAY-RATGSSSSQLALERGRVLGSKQGALKRRSSVLDDEMGHVGP 360

Query: 361  IRRIRQKSNLLYPKGLSTPSSFTFIPVRGIGSETARHFLSSKVHPFSSSAGKTLHPGDTK 420
            IRR+R KSNLLYP GLS PSS T IPV GIGSE A+ F S+KVHPFSSS GK L+     
Sbjct: 361  IRRLRHKSNLLYPTGLSLPSSSTSIPVSGIGSENAQQFQSTKVHPFSSS-GKGLY----S 420

Query: 421  GSLSKVSADSENDMNPSSSFNQIPLRSSEMASKILEQLETLTPQKEKSSELKLLSVRSNS 480
             SLSK SA+SEND+ PSSSF+QIPLRSSEMASKILEQLE LTP K+KS +LKLLSV +NS
Sbjct: 421  RSLSKRSAESENDVKPSSSFSQIPLRSSEMASKILEQLEKLTPPKDKSLKLKLLSVTNNS 480

Query: 481  PMKLSPSMLHGPALRSLEDVDSSKYLKNVEDIRSNDARDHTTLDNGKVEERSSLKFKVPN 540
            P KLSPSMLHGPALRSLEDVDSSKYL+NVEDI+SNDAR+ T+  N KVEE SSLK+K+P 
Sbjct: 481  PTKLSPSMLHGPALRSLEDVDSSKYLENVEDIQSNDARELTSQKN-KVEESSSLKYKLPI 540

Query: 541  DKSISTACDGASSSGLMKDAVPSSGLQVSFVGPSSQTKCSFQMSALEDFEDLDEEGYSNG 600
            +K+IS A DG  S    KD V SS  QVSFVG S QTKC+FQMSA EDF D+DEEG SNG
Sbjct: 541  NKAIS-AGDGLGSPVPTKDTVLSSRPQVSFVGASPQTKCAFQMSAHEDFVDIDEEGCSNG 600

Query: 601  PVTDIS-----------LAVSKPSDTEAITVLDKPRASVEVKPSTLSEMKKINDQRKSDA 660
            PVTDIS           +A+SKP+DTEAITV DKP+AS EVKPST SE+ KIN Q KSD 
Sbjct: 601  PVTDISFDRREKMDGSLVAMSKPNDTEAITV-DKPQASAEVKPSTESELNKINGQSKSDV 660

Query: 661  PVTTGKSPI-SFATASSPSITANAIVPESTSRPEITVSSEVPKTTIAPLFGFGNKLPSQT 720
            PVT  KSPI SFATAS PSITANA  PES  RPE  +SSE PK   AP+FGFG+KLPSQ 
Sbjct: 661  PVTAEKSPILSFATASPPSITANAKDPESILRPEKNISSEAPKAANAPIFGFGDKLPSQK 720

Query: 721  ESISSAPTFTFGNKVATLANEQNAVPVVASESNVAPTQQTSVPSTFTFGDKTTASIPENA 780
            ES SSAPTF FGNK A   NEQNAVPV  SESNVAP              K T  IP NA
Sbjct: 721  ESFSSAPTFAFGNKFAPSTNEQNAVPVATSESNVAP-------------GKATFPIPANA 780

Query: 781  ATENGIKNVGLPLKFASPSVNEKESARVDSVSVLKAEISSSSIRSFGVSKEFMSGNKAGD 840
            ATENG KN G P KFASP VNEKES +V S SV KAE +S SI SFG  +E MS +KAGD
Sbjct: 781  ATENGNKNTGAPFKFASPLVNEKESTKVGSSSVFKAESNSGSILSFGFPQESMS-DKAGD 840

Query: 841  KSSSAGLSVGTFENLF-SSVSTSTPTPSLFSLSSPSTNSNLNNGSLVPTPSIVTPSIVSF 900
            K SSAGLSVGT ENLF SSVSTST  PSLFS SSPSTNSNLNNGSLV      TPSI S 
Sbjct: 841  KRSSAGLSVGTSENLFSSSVSTSTSAPSLFSFSSPSTNSNLNNGSLVS-----TPSIFSS 900

Query: 901  SATSFSKDISNQNSSIKPSLTATPHNSEPAATASLSTSSPIPSFSAAPIFKFGSPSVPST 960
             AT+FS +I+NQN SIKPSLT  P NSEPA T SLS  SP+PSFSAAPIFKFGSPSVPS+
Sbjct: 901  PATTFSNNITNQNPSIKPSLTTAPSNSEPATTTSLSMPSPVPSFSAAPIFKFGSPSVPSS 960

Query: 961  SAPALSAPSGVGSVETKTTLETTLGNLSGTPPSDTSAAKASSTGNSIFQFGAPATADSNK 1020
            SAPALSA       ETKT  ETT GNLSG PPSDTSAAK SS G S+FQFGA AT DSNK
Sbjct: 961  SAPALSA------AETKTKQETTFGNLSGIPPSDTSAAKVSSIGGSVFQFGAAATTDSNK 1020

Query: 1021 QPVSSTFSQGNGTAFGAPVSPASSGPASSTQSTPVFPFSSSSTSFGLAGNTGLSSGSSLF 1080
            QP + T + GN   FGAPV PA+SG ASSTQSTPV PFSSSSTSFGLA NTGLSSGSSLF
Sbjct: 1021 QPENLTSAPGNVPTFGAPVFPANSGVASSTQSTPVLPFSSSSTSFGLAANTGLSSGSSLF 1080

Query: 1081 GSSAPASNLFTSGTTLGLASSSSSASNSVSSGAGTSSSLSNWQSSSTPSFSTGFSSTPTG 1140
            GSSAPASNLF+SGTT GL  +SSSA+NSVSSGAGTSSS  NWQ+SSTPSFSTGFSSTPTG
Sbjct: 1081 GSSAPASNLFSSGTTFGLTGTSSSANNSVSSGAGTSSSFFNWQTSSTPSFSTGFSSTPTG 1140

Query: 1141 VFSFGLSSSSTTSNSAPVVFGSSSTGAATAPMFSFTSAASSQPAFGNSTSQPAFGNSSSQ 1200
             FSFGLSSSS  SNS+P++FGSS+T A+T  MFSFTS ASSQPAFGN             
Sbjct: 1141 GFSFGLSSSSAASNSSPMLFGSSTTSASTTSMFSFTSTASSQPAFGN------------- 1200

Query: 1201 PAFGNSSSQPAFGNSSSQPAFGTLSSQPAFGTSSSQPAFDTSSSQPAFGTSSSQPAFGTS 1260
                                                                        
Sbjct: 1201 ------------------------------------------------------------ 1260

Query: 1261 SSQPAFGTSSSQPAFGSQPAFGSQPAFGSQPSFGTSSSQPAFGTSSSQPAFGHLSSQPAF 1320
                                                                        
Sbjct: 1261 ------------------------------------------------------------ 1272

Query: 1321 GNSQPAFGNSSSQPAFAISNPGFTFGSTPLANNFQANTEDSMAEDGVQAVATPTPMPTFG 1380
                              SN GFTFGSTPLANN QAN EDSMAED VQAV  PT  PTFG
Sbjct: 1321 ------------------SNHGFTFGSTPLANNDQANMEDSMAEDTVQAVTLPT--PTFG 1272

Query: 1381 ---QQPLTPPPSSGYMFGSTAPSPQAASPFQFGNQQNVPSPQNPSLFQASGS--FNAPSA 1440
               QQPLTPPPSSG+MFGS AP P AASPFQFG+QQN P+PQNPS F ASGS  FNA SA
Sbjct: 1381 QQPQQPLTPPPSSGFMFGSAAPPPVAASPFQFGSQQNAPTPQNPSPFHASGSLDFNA-SA 1272

Query: 1441 GGSFSLGAGGGDKANRKYIRVKNSKSRRK 1452
            GGSFSLGAGGGDKANRKY++VK SKSR+K
Sbjct: 1441 GGSFSLGAGGGDKANRKYVKVK-SKSRKK 1272

[Close]

BLAST of Sed0010208.2 vs. ExPASy TrEMBL
Match: A0A6J1FKS9 (nuclear pore complex protein NUP1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111444902 PE=4 SV=1)

HSP 1 Score: 1500.7 bits (3884), Expect = 0.0e+00
Identity = 954/1470 (64.90%), Postives = 1053/1470 (71.63%), Query Frame = 0


Query: 1    MATEREEIRYEGGGRGGKFQKRPPRRPHTTPYDRPPASLRNNSAGKGWLSKIVDPAQKLI 60
            MATERE + YE GGRGGKFQKRP RR HTTPYDRPP +LR NS GKGWLSK+VDPAQKLI
Sbjct: 1    MATEREGVHYE-GGRGGKFQKRPLRRSHTTPYDRPPIALR-NSNGKGWLSKLVDPAQKLI 60

Query: 61   ASSAHRLFSSVFRKRLPAPPPPPPPLPFPASPEANDEMGNENQEEVAADPPGVLEEKNLS 120
             SSAHRLFSSVFRKRL   PPPPP LP   S EANDEM  +NQEEVAADPPG  E  N  
Sbjct: 61   TSSAHRLFSSVFRKRL---PPPPPSLPI--SREANDEMEIKNQEEVAADPPGTQEGTNND 120

Query: 121  LVPGIESDNTHGVTDLEQMLKEKTFTKFEIDRLTELLKSRVADVPSGVEGRKFEQVPSKP 180
             VP I S+N HGV+DLE++LKEKTFT+FEIDRLTELLKSRVADVPSGVE RKFE V S P
Sbjct: 121  FVPSINSNNIHGVSDLEKILKEKTFTRFEIDRLTELLKSRVADVPSGVESRKFEMVSSTP 180

Query: 181  VISYGIHERSPKFPPQDGVSSHIVPTHDMSAKVLNEDVASPAQIAKMYMGGRPLKATPLS 240
            VISY I E SPKFP Q+GV  H+VPTH ++A V +EDVASPA+IAK +MG RP KATPLS
Sbjct: 181  VISYDIQEGSPKFPAQEGVRPHMVPTHVLNANVPDEDVASPAEIAKAFMGSRPPKATPLS 240

Query: 241  MASSSQKLGDSFVSGDTSKSSTLSLVPRSPGNFDVNENGFVTPRSRGRSALYSMARTPYS 300
            M + SQK GD+F  G+ SKSSTLSLVPRSPGNFDV EN FVTPRSRGRSALYSMAR PYS
Sbjct: 241  MVAHSQKFGDTFALGNPSKSSTLSLVPRSPGNFDV-ENDFVTPRSRGRSALYSMARMPYS 300

Query: 301  RVSATPSIKNSVATIDAYSRATGSSLSQSALEQGRLLGSNQGALKCRRSVLDEEMGSVGS 360
            RV ATPSIKNSVAT D+Y RAT +S SQSA EQGRLL SNQGALK R SVLD+E+GSVG 
Sbjct: 301  RVRATPSIKNSVATTDSY-RATVTSSSQSAWEQGRLLESNQGALKRRSSVLDDEIGSVGP 360

Query: 361  IRRIRQKSNLLYPKGLSTPSSFTFIPVRGIGSETARHFLSSKVHPFSSSAGKTLHPGDTK 420
            IRRIR KSNLL+PKGLS PSS T IPV GIGSET++H  S+KVHPFSS AGK  +  +TK
Sbjct: 361  IRRIRHKSNLLFPKGLSLPSSSTSIPVSGIGSETSQHLQSTKVHPFSSPAGKAPYSSETK 420

Query: 421  GSLSKVSADSENDMNPSSSFNQIPLRSSEMASKILEQLETLTPQKEKSSELKLLSVRSNS 480
             +LSK+SA+SEND  PSSSF QIPLRSSEMA KILEQL+ LTP KEKSSELKL SVR+NS
Sbjct: 421  RNLSKMSAESENDRTPSSSFPQIPLRSSEMALKILEQLDKLTPPKEKSSELKLHSVRNNS 480

Query: 481  PMKLSPSMLHGPALRSLEDVDSSKYLKNVEDIRSNDARDHTTLDNGKVEERSSLKFKVPN 540
            PMKLSPSMLHGPALRSLEDVDS+KYL+NVEDIRSND RD T+    K E+ S LK KVP+
Sbjct: 481  PMKLSPSMLHGPALRSLEDVDSAKYLENVEDIRSNDGRDLTSKKKDKFEDSSLLKSKVPS 540

Query: 541  DKSISTACDGASSSGLMKDAVPSSGLQVSFVGPSSQTKCSFQMSALEDFEDLDEEGYSNG 600
            DKSIST   G  SS   KD V SSGLQVSFVGPSS TKC+FQMS  EDF D+D+E YSNG
Sbjct: 541  DKSISTG-GGVGSSVPSKDTVSSSGLQVSFVGPSSLTKCAFQMSVQEDFVDMDDEEYSNG 600

Query: 601  PVT-----------DISLAVSKPSDTEAITVLDKPRASVEVKPSTLSEMKKINDQRKSDA 660
            PV+           D  +AV KPSDTEAITV DKP+AS++ KPS +SEMKKINDQ KSD 
Sbjct: 601  PVSAKSFERREKVDDSLVAVGKPSDTEAITV-DKPQASIQAKPSPVSEMKKINDQAKSDV 660

Query: 661  PVTTGKSPI-SFATASSPSITANAIVPESTSRPEITVSSEVPKTTIAPLFGFGNKLPSQT 720
            PVTT KS I SF TAS  S TAN I PEST+RPE   SSEVPK   AP+FGFG KLPSQ 
Sbjct: 661  PVTTEKSSIFSFPTASPSSTTANVIEPESTTRPEKIASSEVPKAAAAPIFGFGEKLPSQK 720

Query: 721  ESISSAPTFTFGNKVATLANEQNAVPVVASESNVAPTQQTSVPSTFTFGDKTTASIPENA 780
            + + S+PTFTFGNKV T  NEQNAVP V SE NVAPT Q S P+TF FGDK T  IP + 
Sbjct: 721  DPVFSSPTFTFGNKVTTSTNEQNAVPAVTSEGNVAPTLQASAPTTFKFGDKATFPIPAST 780

Query: 781  ATENGIKNVGLPLKFASPSVNEKESARVDSVSVLKAEISSSSIRSFGVSKEFMSGNKAGD 840
            ATENG    G P KFAS  VNEKE A+  S SV K+E SSSS  SFGV KE MS  KAGD
Sbjct: 781  ATENGNSEAGSPFKFASSLVNEKEGAKAGSASVFKSESSSSSTLSFGVPKESMS-EKAGD 840

Query: 841  -KSSSAGLSVGTFENLFSSVSTSTPTPSLFSLSSPSTNSNLNNGSLVPTPSIVTPSIVSF 900
             KSSSAGLSVGT  NL  S  +STPTPSLFS SSP+TNSNL NGSL  TPS   PS    
Sbjct: 841  KKSSSAGLSVGTSGNLLLSSVSSTPTPSLFSFSSPTTNSNLINGSLGSTPS-TFPS---- 900

Query: 901  SATSFSKDISNQNSSIKPSLTATPHNSEPAATASLSTSSPIPSFSAAPIFKFGSPSVPST 960
             + +F  +I+NQNSSIKPSL A   NSEP  T SLSTSSP+PSFSAAPIFKFGS SVPS+
Sbjct: 901  PSNTFPSNITNQNSSIKPSLNAATSNSEPVTTTSLSTSSPMPSFSAAPIFKFGSSSVPSS 960

Query: 961  SAPALSAPSGVGSVETKTTLETT-LGNLSGTPPSDTSAAKASSTGNSIFQFGAPA-TADS 1020
                 SAPSGVGSVETKT  ETT  GN+SG  PSDTSAAK  STG+S+FQFGA + T+DS
Sbjct: 961  -----SAPSGVGSVETKTKQETTPFGNVSGISPSDTSAAKVFSTGSSVFQFGAASTTSDS 1020

Query: 1021 NKQPVSSTFSQGNGTAFGAPVSPASSGPASSTQSTPVFPFSSSSTSFGLAGNTGLSSGSS 1080
            NKQP  STF+  +  +FGAPV PASSG ASSTQSTPV PFSSSSTSFGL GNTGL+SG+S
Sbjct: 1021 NKQPEKSTFAPVSVPSFGAPVLPASSGVASSTQSTPVSPFSSSSTSFGLTGNTGLASGNS 1080

Query: 1081 LFGSSAPASNLFTSGTTLGLASSSSSASNSVSSGAGTSSSLSNWQSSSTPSFSTGFSSTP 1140
            L GSSAPASNLFTSG T G   SSSSA+NSVSSGAGTSSS  NWQ+SS PSFS+GF STP
Sbjct: 1081 LVGSSAPASNLFTSGATFGF-GSSSSANNSVSSGAGTSSSFFNWQASSAPSFSSGFGSTP 1140

Query: 1141 TGVFSFGLSSSSTTSNSAPVVFGSSSTGAA-TAPMFSFTSAASSQPAFGNSTSQPAFGNS 1200
            TG FSFGL+SSS  S+S+P++FGSS+TGAA T  MFSFTSAA++ P              
Sbjct: 1141 TGGFSFGLASSSAASSSSPMLFGSSTTGAASTTSMFSFTSAATAAP-------------- 1200

Query: 1201 SSQPAFGNSSSQPAFGNSSSQPAFGTLSSQPAFGTSSSQPAFDTSSSQPAFGTSSSQPAF 1260
                                                                        
Sbjct: 1201 ------------------------------------------------------------ 1260

Query: 1261 GTSSSQPAFGTSSSQPAFGSQPAFGSQPAFGSQPSFGTSSSQPAFGTSSSQPAFGHLSSQ 1320
                                                    SQPAFGT             
Sbjct: 1261 ----------------------------------------SQPAFGT------------- 1297

Query: 1321 PAFGNSQPAFGNSSSQPAFAISNPGFTFGSTPLANNFQANTEDSMAEDGVQAVATPTPMP 1380
                                 SN GFTFGSTP ANN  AN EDSMAED VQ VA+PTPMP
Sbjct: 1321 ---------------------SNHGFTFGSTPPANNDHANMEDSMAEDTVQTVASPTPMP 1297

Query: 1381 TFGQQPLTPPPSSGYMFGSTAPSPQAASPFQF-GNQQNVPSPQNPSLFQASGS--FNAPS 1440
            +FGQQPLTPPPSSG++FGSTAPSP  A+PFQF G+QQNVP+PQNP+ FQASGS  FNA S
Sbjct: 1381 SFGQQPLTPPPSSGFVFGSTAPSPLGANPFQFGGSQQNVPTPQNPNPFQASGSLDFNA-S 1297

Query: 1441 AGGSFSLGAGGGDKANRKYIRVKNSKSRRK 1452
            AGGSFSLGAGGGDK+NRK+++VK SKSR+K
Sbjct: 1441 AGGSFSLGAGGGDKSNRKFVKVK-SKSRKK 1297

[Close]

BLAST of Sed0010208.2 vs. ExPASy TrEMBL
Match: A0A6J1FF52 (nuclear pore complex protein NUP1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444902 PE=4 SV=1)

HSP 1 Score: 1496.1 bits (3872), Expect = 0.0e+00
Identity = 954/1474 (64.72%), Postives = 1053/1474 (71.44%), Query Frame = 0


Query: 1    MATEREEIRYEGGGRGGKFQKRPPRRPHTTPYDRPPASLRNNSAGKGWLSKIVDPAQKLI 60
            MATERE + YE GGRGGKFQKRP RR HTTPYDRPP +LR NS GKGWLSK+VDPAQKLI
Sbjct: 1    MATEREGVHYE-GGRGGKFQKRPLRRSHTTPYDRPPIALR-NSNGKGWLSKLVDPAQKLI 60

Query: 61   ASSAHRLFSSVFRKRLPAPPPPPPPLPFPASPEANDEMGNENQEEVAADPPGVLEEKNLS 120
             SSAHRLFSSVFRKRL   PPPPP LP   S EANDEM  +NQEEVAADPPG  E  N  
Sbjct: 61   TSSAHRLFSSVFRKRL---PPPPPSLPI--SREANDEMEIKNQEEVAADPPGTQEGTNND 120

Query: 121  LVPGIESDNTHGVTDLEQMLKEKTFTKFEIDRLTELLKSRVADVPSGVEGRKFEQVPSKP 180
             VP I S+N HGV+DLE++LKEKTFT+FEIDRLTELLKSRVADVPSGVE RKFE V S P
Sbjct: 121  FVPSINSNNIHGVSDLEKILKEKTFTRFEIDRLTELLKSRVADVPSGVESRKFEMVSSTP 180

Query: 181  VISYGIHERSPKFPPQDGVSSHIVPTHDMSAKVLNEDVASPAQIAKMYMGGRPLKATPLS 240
            VISY I E SPKFP Q+GV  H+VPTH ++A V +EDVASPA+IAK +MG RP KATPLS
Sbjct: 181  VISYDIQEGSPKFPAQEGVRPHMVPTHVLNANVPDEDVASPAEIAKAFMGSRPPKATPLS 240

Query: 241  MASSSQKLGDSFVSGDTSKSSTLSLVPRSPGNFDVNENGFVTPRSRGRSALYSMARTPYS 300
            M + SQK GD+F  G+ SKSSTLSLVPRSPGNFDV EN FVTPRSRGRSALYSMAR PYS
Sbjct: 241  MVAHSQKFGDTFALGNPSKSSTLSLVPRSPGNFDV-ENDFVTPRSRGRSALYSMARMPYS 300

Query: 301  RVSATPSIKNSVATIDAYSRATGSSLSQSALEQGRLLGSNQGALKCRRSVLDEEMGSVGS 360
            RV ATPSIKNSVAT D+Y RAT +S SQSA EQGRLL SNQGALK R SVLD+E+GSVG 
Sbjct: 301  RVRATPSIKNSVATTDSY-RATVTSSSQSAWEQGRLLESNQGALKRRSSVLDDEIGSVGP 360

Query: 361  IRRIRQKSNLLYPKGLSTPSSFTFIPVRGIGSETARHFLSSKVHPFSSSAGKTLHPGDTK 420
            IRRIR KSNLL+PKGLS PSS T IPV GIGSET++H  S+KVHPFSS AGK  +  +TK
Sbjct: 361  IRRIRHKSNLLFPKGLSLPSSSTSIPVSGIGSETSQHLQSTKVHPFSSPAGKAPYSSETK 420

Query: 421  GSLSKVSADSENDMNPSSSFNQIPLRSSEMASKILEQLETLTPQKEKSSELKLLSVRSNS 480
             +LSK+SA+SEND  PSSSF QIPLRSSEMA KILEQL+ LTP KEKSSELKL SVR+NS
Sbjct: 421  RNLSKMSAESENDRTPSSSFPQIPLRSSEMALKILEQLDKLTPPKEKSSELKLHSVRNNS 480

Query: 481  PMKLSPSMLHGPALRSLEDVDSSKYLKNVEDIRSNDARDHTTLDNGKVEERSSLKFKVPN 540
            PMKLSPSMLHGPALRSLEDVDS+KYL+NVEDIRSND RD T+    K E+ S LK KVP+
Sbjct: 481  PMKLSPSMLHGPALRSLEDVDSAKYLENVEDIRSNDGRDLTSKKKDKFEDSSLLKSKVPS 540

Query: 541  DKSISTACDGASSSGLMKDAVPSSGLQVSFVGPSSQTKCSFQMSALEDFEDLDEEGYSNG 600
            DKSIST   G  SS   KD V SSGLQVSFVGPSS TKC+FQMS  EDF D+D+E YSNG
Sbjct: 541  DKSISTG-GGVGSSVPSKDTVSSSGLQVSFVGPSSLTKCAFQMSVQEDFVDMDDEEYSNG 600

Query: 601  PVT-----------DISLAVSKPSDTEAITVLDKPRASVEVKPSTLSEMKKINDQRKSDA 660
            PV+           D  +AV KPSDTEAITV DKP+AS++ KPS +SEMKKINDQ KSD 
Sbjct: 601  PVSAKSFERREKVDDSLVAVGKPSDTEAITV-DKPQASIQAKPSPVSEMKKINDQAKSDV 660

Query: 661  PVTTGKSPI-SFATASSPSITANAIVPESTSRPEITVSSEVPKTTIAPLFGFGNKLPSQT 720
            PVTT KS I SF TAS  S TAN I PEST+RPE   SSEVPK   AP+FGFG KLPSQ 
Sbjct: 661  PVTTEKSSIFSFPTASPSSTTANVIEPESTTRPEKIASSEVPKAAAAPIFGFGEKLPSQK 720

Query: 721  ESISSAPTFTFGNKVATLANEQNAVPVVASESNVAPTQQTSVPSTFTFGDKTTASIPENA 780
            + + S+PTFTFGNKV T  NEQNAVP V SE NVAPT Q S P+TF FGDK T  IP + 
Sbjct: 721  DPVFSSPTFTFGNKVTTSTNEQNAVPAVTSEGNVAPTLQASAPTTFKFGDKATFPIPAST 780

Query: 781  ATENGIKNVGLPLKFASPSVNEKESARVDSVSVLKAEISSSSIR----SFGVSKEFMSGN 840
            ATENG    G P KFAS  VNEKE A+  S SV K+E SSSS      SFGV KE MS  
Sbjct: 781  ATENGNSEAGSPFKFASSLVNEKEGAKAGSASVFKSESSSSSFNCSTLSFGVPKESMS-E 840

Query: 841  KAGD-KSSSAGLSVGTFENLFSSVSTSTPTPSLFSLSSPSTNSNLNNGSLVPTPSIVTPS 900
            KAGD KSSSAGLSVGT  NL  S  +STPTPSLFS SSP+TNSNL NGSL  TPS   PS
Sbjct: 841  KAGDKKSSSAGLSVGTSGNLLLSSVSSTPTPSLFSFSSPTTNSNLINGSLGSTPS-TFPS 900

Query: 901  IVSFSATSFSKDISNQNSSIKPSLTATPHNSEPAATASLSTSSPIPSFSAAPIFKFGSPS 960
                 + +F  +I+NQNSSIKPSL A   NSEP  T SLSTSSP+PSFSAAPIFKFGS S
Sbjct: 901  ----PSNTFPSNITNQNSSIKPSLNAATSNSEPVTTTSLSTSSPMPSFSAAPIFKFGSSS 960

Query: 961  VPSTSAPALSAPSGVGSVETKTTLETT-LGNLSGTPPSDTSAAKASSTGNSIFQFGAPA- 1020
            VPS+     SAPSGVGSVETKT  ETT  GN+SG  PSDTSAAK  STG+S+FQFGA + 
Sbjct: 961  VPSS-----SAPSGVGSVETKTKQETTPFGNVSGISPSDTSAAKVFSTGSSVFQFGAAST 1020

Query: 1021 TADSNKQPVSSTFSQGNGTAFGAPVSPASSGPASSTQSTPVFPFSSSSTSFGLAGNTGLS 1080
            T+DSNKQP  STF+  +  +FGAPV PASSG ASSTQSTPV PFSSSSTSFGL GNTGL+
Sbjct: 1021 TSDSNKQPEKSTFAPVSVPSFGAPVLPASSGVASSTQSTPVSPFSSSSTSFGLTGNTGLA 1080

Query: 1081 SGSSLFGSSAPASNLFTSGTTLGLASSSSSASNSVSSGAGTSSSLSNWQSSSTPSFSTGF 1140
            SG+SL GSSAPASNLFTSG T G   SSSSA+NSVSSGAGTSSS  NWQ+SS PSFS+GF
Sbjct: 1081 SGNSLVGSSAPASNLFTSGATFGF-GSSSSANNSVSSGAGTSSSFFNWQASSAPSFSSGF 1140

Query: 1141 SSTPTGVFSFGLSSSSTTSNSAPVVFGSSSTGAA-TAPMFSFTSAASSQPAFGNSTSQPA 1200
             STPTG FSFGL+SSS  S+S+P++FGSS+TGAA T  MFSFTSAA++ P          
Sbjct: 1141 GSTPTGGFSFGLASSSAASSSSPMLFGSSTTGAASTTSMFSFTSAATAAP---------- 1200

Query: 1201 FGNSSSQPAFGNSSSQPAFGNSSSQPAFGTLSSQPAFGTSSSQPAFDTSSSQPAFGTSSS 1260
                                                                        
Sbjct: 1201 ------------------------------------------------------------ 1260

Query: 1261 QPAFGTSSSQPAFGTSSSQPAFGSQPAFGSQPAFGSQPSFGTSSSQPAFGTSSSQPAFGH 1320
                                                        SQPAFGT         
Sbjct: 1261 --------------------------------------------SQPAFGT--------- 1301

Query: 1321 LSSQPAFGNSQPAFGNSSSQPAFAISNPGFTFGSTPLANNFQANTEDSMAEDGVQAVATP 1380
                                     SN GFTFGSTP ANN  AN EDSMAED VQ VA+P
Sbjct: 1321 -------------------------SNHGFTFGSTPPANNDHANMEDSMAEDTVQTVASP 1301

Query: 1381 TPMPTFGQQPLTPPPSSGYMFGSTAPSPQAASPFQF-GNQQNVPSPQNPSLFQASGS--F 1440
            TPMP+FGQQPLTPPPSSG++FGSTAPSP  A+PFQF G+QQNVP+PQNP+ FQASGS  F
Sbjct: 1381 TPMPSFGQQPLTPPPSSGFVFGSTAPSPLGANPFQFGGSQQNVPTPQNPNPFQASGSLDF 1301

Query: 1441 NAPSAGGSFSLGAGGGDKANRKYIRVKNSKSRRK 1452
            NA SAGGSFSLGAGGGDK+NRK+++VK SKSR+K
Sbjct: 1441 NA-SAGGSFSLGAGGGDKSNRKFVKVK-SKSRKK 1301

[Close]

BLAST of Sed0010208.2 vs. ExPASy TrEMBL
Match: A0A6J1K059 (nuclear pore complex protein NUP1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111488998 PE=4 SV=1)

HSP 1 Score: 1489.2 bits (3854), Expect = 0.0e+00
Identity = 948/1470 (64.49%), Postives = 1050/1470 (71.43%), Query Frame = 0


Query: 1    MATEREEIRYEGGGRGGKFQKRPPRRPHTTPYDRPPASLRNNSAGKGWLSKIVDPAQKLI 60
            MATEREE+RYE GGRGGKFQKRP RR HTTPYDRPPA+LR NSAGKGWLSK+VDPAQKLI
Sbjct: 1    MATEREEVRYE-GGRGGKFQKRPLRRAHTTPYDRPPAALR-NSAGKGWLSKLVDPAQKLI 60

Query: 61   ASSAHRLFSSVFRKRLPAPPPPPPPLPFPASPEANDEMGNENQEEVAADPPGVLEEKNLS 120
             SSAHRLFSSVFRKRL   PPPPP LP     EANDEM  +NQEEVAAD PG  E  N  
Sbjct: 61   TSSAHRLFSSVFRKRL---PPPPPSLPI--YREANDEMEIKNQEEVAADSPGTQEGTNND 120

Query: 121  LVPGIESDNTHGVTDLEQMLKEKTFTKFEIDRLTELLKSRVADVPSGVEGRKFEQVPSKP 180
             VP I S+N HGV+DLE++LKEKTFT+FEIDRLTELLKSRVADVPSGVE RKFE+VPS P
Sbjct: 121  FVPSINSNNIHGVSDLEKILKEKTFTRFEIDRLTELLKSRVADVPSGVESRKFEKVPSTP 180

Query: 181  VISYGIHERSPKFPPQDGVSSHIVPTHDMSAKVLNEDVASPAQIAKMYMGGRPLKATPLS 240
            VISY I E SPKFP Q+ V  H+VP H ++A V +EDVASPA+IAK +MG RP KATPLS
Sbjct: 181  VISYDIQEGSPKFPAQERVRPHMVPNHVVNANVPDEDVASPAEIAKAFMGSRPPKATPLS 240

Query: 241  MASSSQKLGDSFVSGDTSKSSTLSLVPRSPGNFDVNENGFVTPRSRGRSALYSMARTPYS 300
            M + SQK GD+F  G+ SKSSTLSLVPRSPGNFDV EN FVTPRSRGRSALYSMAR PYS
Sbjct: 241  MVAHSQKFGDTFALGNPSKSSTLSLVPRSPGNFDV-ENDFVTPRSRGRSALYSMARMPYS 300

Query: 301  RVSATPSIKNSVATIDAYSRATGSSLSQSALEQGRLLGSNQGALKCRRSVLDEEMGSVGS 360
            RV ATPSIKNSVAT D+Y RA+ +S SQSA EQGRLL SNQGALK R SVLD+E+GSVG 
Sbjct: 301  RVRATPSIKNSVATTDSY-RASVTSSSQSAWEQGRLLESNQGALKRRSSVLDDEIGSVGP 360

Query: 361  IRRIRQKSNLLYPKGLSTPSSFTFIPVRGIGSETARHFLSSKVHPFSSSAGKTLHPGDTK 420
            IRRIR KSNLL+PKGLS PSS T IPV GIGSET +H  S+KVHPFSS+AGK  +  +TK
Sbjct: 361  IRRIRHKSNLLFPKGLSLPSSSTSIPVSGIGSETYQHLQSTKVHPFSSTAGKAPYSSETK 420

Query: 421  GSLSKVSADSENDMNPSSSFNQIPLRSSEMASKILEQLETLTPQKEKSSELKLLSVRSNS 480
             +LSK+SA+SEND  PSSSF QIPLRSSEMA KILEQL+ LTP KEKSSELKL SVR+NS
Sbjct: 421  RNLSKMSAESENDRTPSSSFPQIPLRSSEMALKILEQLDKLTPPKEKSSELKLHSVRNNS 480

Query: 481  PMKLSPSMLHGPALRSLEDVDSSKYLKNVEDIRSNDARDHTTLDNGKVEERSSLKFKVPN 540
            PMKLSPSMLHGPALRSLEDVDS+KYL+NVEDIRSND RD T+  N K E+ S LK +VP+
Sbjct: 481  PMKLSPSMLHGPALRSLEDVDSAKYLENVEDIRSNDGRDLTSKKNDKFEDSSLLKSEVPS 540

Query: 541  DKSISTACDGASSSGLMKDAVPSSGLQVSFVGPSSQTKCSFQMSALEDFEDLDEEGYSNG 600
            DKSIST   G  SS   KD V SSGLQVSFVGPSS TKC+FQMS  EDF D+D+E YSNG
Sbjct: 541  DKSISTG-GGVGSSVPSKDTVSSSGLQVSFVGPSSLTKCAFQMSVQEDFVDMDDEEYSNG 600

Query: 601  PVT-----------DISLAVSKPSDTEAITVLDKPRASVEVKPSTLSEMKKINDQRKSDA 660
            PV            D  +AV KPSD EAI ++DKP+AS++ KPST+SEMKKINDQ KSD 
Sbjct: 601  PVAAKSFERREKVDDSLVAVGKPSDNEAI-IVDKPQASIQAKPSTVSEMKKINDQAKSDI 660

Query: 661  PVTTGKSPI-SFATASSPSITANAIVPESTSRPEITVSSEVPKTTIAPLFGFGNKLPSQT 720
            PVTT KS I SF TAS  S TA  I PEST+RPE    SEVPK  +AP+FGFG K PSQ 
Sbjct: 661  PVTTEKSSIFSFPTASPSSTTATVIEPESTTRPEKIAFSEVPKAAVAPIFGFGEKFPSQK 720

Query: 721  ESISSAPTFTFGNKVATLANEQNAVPVVASESNVAPTQQTSVPSTFTFGDKTTASIPENA 780
            + + S+PTFTFGNKV T  NEQNAVP V SE NVAPT Q S P+TF FGDK T  IP + 
Sbjct: 721  DPVFSSPTFTFGNKVTTSTNEQNAVPAVTSEGNVAPTLQASAPTTFKFGDKATFPIPAST 780

Query: 781  ATENGIKNVGLPLKFASPSVNEKESARVDSVSVLKAEISSSSIRSFGVSKEFMSGNKAGD 840
             TENG    G P KFAS  VNEKE A+  S SV K+E SSSSI SFGV KE MS  KAGD
Sbjct: 781  TTENGNSEAGSPFKFASSLVNEKEGAKAGSASVFKSESSSSSILSFGVPKELMS-EKAGD 840

Query: 841  -KSSSAGLSVGTFENLFSSVSTSTPTPSLFSLSSPSTNSNLNNGSLVPTPSIVTPSIVSF 900
             KSSSAGLSVGT  NL  S  +STPTPSLFS SSP+TNSNL NGSL  TPS   PS    
Sbjct: 841  KKSSSAGLSVGTSGNLLLSSVSSTPTPSLFSFSSPTTNSNLINGSLGSTPS-TFPS---- 900

Query: 901  SATSFSKDISNQNSSIKPSLTATPHNSEPAATASLSTSSPIPSFSAAPIFKFGSPSVPST 960
             + +F  +I+NQNSSIKPSL A   NSEP  T SLSTSSP+PSFSAAPIFKFGS SVPST
Sbjct: 901  PSNTFPSNITNQNSSIKPSLNAATSNSEPVTTTSLSTSSPMPSFSAAPIFKFGSSSVPST 960

Query: 961  SAPALSAPSGVGSVETKTTLETT-LGNLSGTPPSDTSAAKASSTGNSIFQFGAPA-TADS 1020
                 SAP+G GSVETKT  ETT  GN+SG  PSDTSAAK  STG+S+FQFGA + T+DS
Sbjct: 961  -----SAPNGAGSVETKTKQETTPFGNVSGISPSDTSAAKVFSTGSSVFQFGAASTTSDS 1020

Query: 1021 NKQPVSSTFSQGNGTAFGAPVSPASSGPASSTQSTPVFPFSSSSTSFGLAGNTGLSSGSS 1080
            NK+P  STF+  +  +FGAPV PASSG ASSTQSTPV PFSSSSTSFGL GNTGL+SG+S
Sbjct: 1021 NKEPEKSTFAPVSVPSFGAPVLPASSGVASSTQSTPVSPFSSSSTSFGLTGNTGLASGNS 1080

Query: 1081 LFGSSAPASNLFTSGTTLGLASSSSSASNSVSSGAGTSSSLSNWQSSSTPSFSTGFSSTP 1140
            L GSSAPASNLF SG T G   SSSSA+NSVSSGAGTSSS  NWQ+SS PSFS+GF STP
Sbjct: 1081 LVGSSAPASNLFASGATFGF-GSSSSANNSVSSGAGTSSSFFNWQASSGPSFSSGFGSTP 1140

Query: 1141 TGVFSFGLSSSSTTSNSAPVVFGSSSTGAA-TAPMFSFTSAASSQPAFGNSTSQPAFGNS 1200
            TG FSFGL+SSS  S+SAP++FGSSSTGAA T  MFSFTSAA++                
Sbjct: 1141 TGGFSFGLASSSAASSSAPMLFGSSSTGAASTTSMFSFTSAATA---------------- 1200

Query: 1201 SSQPAFGNSSSQPAFGNSSSQPAFGTLSSQPAFGTSSSQPAFDTSSSQPAFGTSSSQPAF 1260
                    +SSQPAFGN                                           
Sbjct: 1201 --------ASSQPAFGN------------------------------------------- 1260

Query: 1261 GTSSSQPAFGTSSSQPAFGSQPAFGSQPAFGSQPSFGTSSSQPAFGTSSSQPAFGHLSSQ 1320
                                                                        
Sbjct: 1261 ------------------------------------------------------------ 1297

Query: 1321 PAFGNSQPAFGNSSSQPAFAISNPGFTFGSTPLANNFQANTEDSMAEDGVQAVATPTPMP 1380
                                 SN GFTFGSTP ANN  AN EDSMAED VQ VA PTPMP
Sbjct: 1321 ---------------------SNHGFTFGSTPPANNDHANMEDSMAEDTVQTVALPTPMP 1297

Query: 1381 TFGQQPLTPPPSSGYMFGSTAPSPQAASPFQF-GNQQNVPSPQNPSLFQASGS--FNAPS 1440
            +FGQQPLTPPPSSG+MFGSTAPSP  A+PFQF G+QQNV +PQNP+ FQASGS  FNA S
Sbjct: 1381 SFGQQPLTPPPSSGFMFGSTAPSPLGANPFQFGGSQQNVSTPQNPNPFQASGSLDFNA-S 1297

Query: 1441 AGGSFSLGAGGGDKANRKYIRVKNSKSRRK 1452
            AGGSFSLGAGGGDK+NRK+++VK SKSR+K
Sbjct: 1441 AGGSFSLGAGGGDKSNRKFVKVK-SKSRKK 1297

[Close]

BLAST of Sed0010208.2 vs. TAIR 10
Match: AT3G10650.1 (BEST Arabidopsis thaliana protein match is: nucleoporin-related (TAIR:AT5G20200.1); Has 61042 Blast hits to 31782 proteins in 2093 species: Archae - 202; Bacteria - 16480; Metazoa - 16017; Fungi - 12552; Plants - 1653; Viruses - 629; Other Eukaryotes - 13509 (source: NCBI BLink). )

HSP 1 Score: 296.2 bits (757), Expect = 1.4e-79
Identity = 452/1378 (32.80%), Postives = 644/1378 (46.73%), Query Frame = 0


Query: 10   YEGG-GRGGKFQKRPPRRPHTTPYDRPPASLRN------NSAGKGWLSKIVDPAQKLIAS 69
            Y GG G GGKF+K   RR   TPYDRP  S+RN      +  G GWLSK+VDPAQ+LI  
Sbjct: 13   YGGGLGTGGKFRKPTARRSQKTPYDRPTTSVRNAGLGGGDVRGGGWLSKLVDPAQRLITY 72

Query: 70   SAHRLFSSVFRKRLPAPPPPPPPLPFPASPEANDEMGNENQEEVAADPPGVLEEKNLSLV 129
            SA RLF S+ RKRL +      PL  P   +   E G  NQE        V    NLS+ 
Sbjct: 73   SAQRLFGSLSRKRLGS---GETPLQSPEQQKQLPERG-VNQETKVGHKEDV---SNLSMK 132

Query: 130  PG-IESDNTH--------GVTDLEQMLKEKTFTKFEIDRLTELLKSRVADVPSGVEGRKF 189
             G I  ++T+        G TDLE++L+ KTFT+ E+DRLT LL+S+ AD  +  E ++ 
Sbjct: 133  NGLIRMEDTNASVDPPKDGFTDLEKILQGKTFTRSEVDRLTTLLRSKAADSSTMNEEQRN 192

Query: 190  EQVPSKPVISYGIHERSPKFPPQDGVSSHIVPTHDMSAKVLNEDVASPAQIAKMYMGGRP 249
            E      V     HER  +  P +G  + +V T   S + L+E +ASPAQ+AK YMG RP
Sbjct: 193  E--VGMVVRHPPSHERD-RTHPDNGSMNTLVSTPPGSLRTLDECIASPAQLAKAYMGSRP 252

Query: 250  LKATPLSMASSSQK-LGDSFVSGDT---SKSSTLSLVPRSPGNFDVNENGFVTPRSRGRS 309
             + TP  +    Q    DS     T    KS T+SLV +  G   + ENGFVTPRSRGRS
Sbjct: 253  SEVTPSMLGLRGQAGREDSVFLNRTPFPQKSPTMSLVTKPSGQRPL-ENGFVTPRSRGRS 312

Query: 310  ALYSMARTPYSRVSATPSIKNSVATIDAYSRATGSSLSQSALEQGRLLGSNQG---ALKC 369
            A+YSMARTPYSR  ++  I +                S S  E+    GS QG    LK 
Sbjct: 313  AVYSMARTPYSRPQSSVKIGSLF------------QASPSKWEESLPSGSRQGFQSGLKR 372

Query: 370  RRSVLDEEMGSVGSIRRIRQKSNLLYPKGLSTPSSFTFIPVRGIGSETARHFLSSKVHPF 429
            R SVLD ++GSVG +RRIRQKSN L  + L+ P S + + VR  G E             
Sbjct: 373  RSSVLDNDIGSVGPVRRIRQKSN-LSSRSLALPVSESPLSVRANGGE------------- 432

Query: 430  SSSAGKTLHPGDTKGSLSKVSADSENDMNPSSSFNQIPLRSSEMASKILEQLETLTPQKE 489
                 KT H           S DS  D+ P SSFN +P +SSEMASKIL+QL+       
Sbjct: 433  -----KTTH----------TSKDSAEDI-PGSSFNLVPTKSSEMASKILQQLD------- 492

Query: 490  KSSELKLLSVRSNSPMKLSPSMLHGPALRSLEDVDSSKYLKNVEDIRSNDARDHTTLDNG 549
                 KL+S R  SP KLSPSML GPAL+SL++V++ K+L N+ + ++N     ++    
Sbjct: 493  -----KLVSTREKSPSKLSPSMLRGPALKSLQNVEAPKFLGNLPEKKANS--PDSSYQKQ 552

Query: 550  KVEERSSLKFKVPNDKSISTACDGASSSGLMKDA-VPSSGLQVSFVGPSSQ---TKCSFQ 609
            ++   S  +  +   +    A DG S +G  KD  +   G+ +       +    K SF+
Sbjct: 553  EISRESVSREVLAQSEKTGDAVDGTSKTGSSKDQDMRGKGVYMPLTNSLEEHPPKKRSFR 612

Query: 610  MSALEDFEDLDEE-GYSNGP--VTDISLAVSKPSDTEAITVLDKPRASVEVKPSTLSEMK 669
            MSA EDF +LD++ G ++ P  V +   A        ++ + +KP    E  PST     
Sbjct: 613  MSAHEDFLELDDDLGAASTPCEVAEKQNAFEVEKSHISMPIGEKPLTPSEAMPSTSYISN 672

Query: 670  KINDQRKSDAPVTTGKS-----PISFATASSPSITANAIVPESTSRPEITVSSEVPKTTI 729
                Q  S+  + T ++     PI     S+ +    +   + T +  I+      +   
Sbjct: 673  GDASQGTSNGSLETERNKFVAFPIEAVQQSNMASEPTSKFIQGTEKSSISSGKPTSEEKR 732

Query: 730  APLFGFGNKLPSQTESISSAPTFTFGNKVATLANEQNAVPVVASESNVAPTQQTSVPSTF 789
             PL     + P +  ++   P  +F      L N+ +     +++  +  T  T+     
Sbjct: 733  IPL-----EEPKKPAAV--FPNISFSPPATGLLNQNSG---ASADIKLEKTSSTA----- 792

Query: 790  TFG-DKTTASIPENAATENGIKNVGLPLKFASPSVNEK-ESARVDSVSVLKAEISSSSIR 849
             FG  +  A   E+  T +   +       A+P++N    SA  ++V+   +  S +S  
Sbjct: 793  -FGVSEAWAKPTESKKTFSNSASGAESSTSAAPTLNGSIFSAGANAVTPPPSNGSLTSSP 852

Query: 850  SFGVS-KEFMSGNKAGDKSSSAGLSVGTF--ENLFSSVSTSTPTPSLFSLSSP-STNSNL 909
            SF  S     S N  GD  S+      T    ++F  + TS  + S  + +SP S+ S  
Sbjct: 853  SFPPSISNIPSDNSVGDMPSTVQSFAATHNSSSIFGKLPTSNDSNSQSTSASPLSSTSPF 912

Query: 910  NNGSLVPTPSIVTPSIVSFSATSFSKDISNQNSSIKPSLTATPHNSEPAATASLSTSSPI 969
              G   P      P+ VS S+   SK+   +N++   + T         A+A  ST    
Sbjct: 913  KFGQ--PAAPFSAPA-VSESSGQISKETEVKNATFGNTST---FKFGGMASADQSTGIVF 972

Query: 970  PSFSA----APIFKFGSPSV-------PSTSAPALSAPSGVGSVETKTTLETTLGNLSGT 1029
             + SA     P F FGS SV       PST+  A SAP   GS+    T  +T G  +  
Sbjct: 973  GAKSAENKSRPGFVFGSSSVVGGSTLNPSTA--AASAPESSGSLIFGVTSSSTPGTETSK 1032

Query: 1030 PPSDTSAAK------------------------ASSTGNSIFQFGA--PATADSNKQPVS 1089
              + ++A                          ++STG+S+F F A   A+A S++   S
Sbjct: 1033 ISASSAATNTGNSVFGTSSFAFTSSGSSMVGGVSASTGSSVFGFNAVSSASATSSQSQAS 1092

Query: 1090 STFSQGNGTAFGAPVSPASSGPASSTQSTPV-FPFSSSSTSFGLAGNTGLSSGSSLFGSS 1149
            + F  GN     A      SG  +STQS P  F  S S+ SFGL+GN+ L+S SS FG S
Sbjct: 1093 NLFGAGN-----AQTGNTGSGTTTSTQSIPFQFGSSPSAPSFGLSGNSSLASNSSPFGFS 1152

Query: 1150 APASNLFTSGTTLGLASSSSSASNSVSSGA---GTSSSLSNWQSSSTPSFSTGF--SSTP 1209
                 +FTS +T  L+S++SSAS+S +  +   GTS    N   +S P FS+ F  SSTP
Sbjct: 1153 KSEPAVFTSVSTPQLSSTNSSASSSSTMSSPLFGTSWQAPNSSPNSGPVFSSSFTTSSTP 1212

Query: 1210 TGVFSFGLSSSSTTSNSAPVVFGSSSTGA-ATAPMFSFTSAASSQPAFGNSTSQPAFGNS 1269
            T  FSFG SS++T S++   +FG+S+    + +P+F F S   + P       QP FGNS
Sbjct: 1213 T-TFSFGGSSAATVSSTTTPIFGASTNNTPSPSPIFGFGSTPPTTP------QQPVFGNS 1272

Query: 1270 SSQPAFGNSSSQPAFGNSSSQPAFGTLSSQPAFGTSSSQPAFDT--SSSQPAFGTSSSQP 1295
                    + SQ  FGNS+   AFG  ++      +      D+    +  A   S   P
Sbjct: 1273 -------GTPSQSLFGNSTPGFAFGAPNNGNGINNNQQVSMEDSMAEDTDQANRASMVAP 1275

[Close]

BLAST of Sed0010208.2 vs. TAIR 10
Match: AT1G10390.1 (Nucleoporin autopeptidase )

HSP 1 Score: 72.4 bits (176), Expect = 3.4e-12
Identity = 158/407 (38.82%), Postives = 215/407 (52.83%), Query Frame = 0


Query: 1048 SSTSFGLAGNTGLSSGSSLFG--SSAPASNLFTSGTTLGLASSSSSASNSVSSGAGTSSS 1107
            SS  FG +  T      SLFG  S+  ++N F   T  G  +S+  A+ S SS  G++S+
Sbjct: 4    SSNPFGQSSGTSPFGSQSLFGQTSNTSSNNPFAPATPFG--TSAPFAAQSGSSIFGSTST 63

Query: 1108 LSNWQSSSTPSFSTGFSSTPTGVFSFGLSSSSTTSNSAPVVFGSS--------STGAATA 1167
                     P  S+ F+STPT    FG SSS    NS P  FG+S        S+G    
Sbjct: 64   ----GVFGAPQTSSPFASTPT----FGASSSPAFGNSTP-AFGASPASSPFGGSSGFGQK 123

Query: 1168 PMFSFTSAASSQPAFGNST--SQPAFGNSS----------SQPAFGNSSSQPAFGNSSSQ 1227
            P+  F++  S+   FGNST  SQPAFGN+S          + PAFG + S P+FG ++S 
Sbjct: 124  PL-GFSTPQSN--PFGNSTQQSQPAFGNTSFGSSTPFGATNTPAFG-APSTPSFG-ATST 183

Query: 1228 PAFGTLSSQPAFGTSSSQPAFDTSSSQPAFGTSSSQPAFGTSSSQPAF---GTSSSQPAF 1287
            P+FG  SS PAFG +++ PAF  S+S P+FG +++ PAFG S + PAF   GT+     F
Sbjct: 184  PSFGA-SSTPAFGATNT-PAFGASNS-PSFGATNT-PAFGASPT-PAFGSTGTTFGNTGF 243

Query: 1288 GSQPAFGSQ--PAFGSQ--PSFGTSSSQPAFGTSSSQPAFGHLSSQPAFG-NSQPAFGNS 1347
            GS  AFG+   PAFG+   P+FG S + PAFG SS+ PAFG  SS PAFG +S PAFG S
Sbjct: 244  GSGGAFGASNTPAFGASGTPAFGASGT-PAFGASST-PAFG-ASSTPAFGASSTPAFGGS 303

Query: 1348 SSQPAFAISN-PGFTFGSTPLANNFQANTEDSMAEDGVQAVATPTPMPTFGQQPLTPPPS 1407
            S+ P+F  SN   F+FGS+P      A  + + A       +TP+P   FG    + P  
Sbjct: 304  ST-PSFGASNTSSFSFGSSP------AFGQSTSAFGSSAFGSTPSP---FGGAQASTPTF 363

Query: 1408 SGYMFGSTAPSPQAASPFQFGNQQ--NVPSPQNPSLFQASGSFNAPS 1422
             G  FG +           FG QQ  +   P  P++   +G+   P+
Sbjct: 364  GGSGFGQST----------FGGQQGGSRAVPYAPTVEADTGTGTQPA 366

[Close]

BLAST of Sed0010208.2 vs. TAIR 10
Match: AT1G10390.2 (Nucleoporin autopeptidase )

HSP 1 Score: 72.4 bits (176), Expect = 3.4e-12
Identity = 158/407 (38.82%), Postives = 215/407 (52.83%), Query Frame = 0


Query: 1048 SSTSFGLAGNTGLSSGSSLFG--SSAPASNLFTSGTTLGLASSSSSASNSVSSGAGTSSS 1107
            SS  FG +  T      SLFG  S+  ++N F   T  G  +S+  A+ S SS  G++S+
Sbjct: 4    SSNPFGQSSGTSPFGSQSLFGQTSNTSSNNPFAPATPFG--TSAPFAAQSGSSIFGSTST 63

Query: 1108 LSNWQSSSTPSFSTGFSSTPTGVFSFGLSSSSTTSNSAPVVFGSS--------STGAATA 1167
                     P  S+ F+STPT    FG SSS    NS P  FG+S        S+G    
Sbjct: 64   ----GVFGAPQTSSPFASTPT----FGASSSPAFGNSTP-AFGASPASSPFGGSSGFGQK 123

Query: 1168 PMFSFTSAASSQPAFGNST--SQPAFGNSS----------SQPAFGNSSSQPAFGNSSSQ 1227
            P+  F++  S+   FGNST  SQPAFGN+S          + PAFG + S P+FG ++S 
Sbjct: 124  PL-GFSTPQSN--PFGNSTQQSQPAFGNTSFGSSTPFGATNTPAFG-APSTPSFG-ATST 183

Query: 1228 PAFGTLSSQPAFGTSSSQPAFDTSSSQPAFGTSSSQPAFGTSSSQPAF---GTSSSQPAF 1287
            P+FG  SS PAFG +++ PAF  S+S P+FG +++ PAFG S + PAF   GT+     F
Sbjct: 184  PSFGA-SSTPAFGATNT-PAFGASNS-PSFGATNT-PAFGASPT-PAFGSTGTTFGNTGF 243

Query: 1288 GSQPAFGSQ--PAFGSQ--PSFGTSSSQPAFGTSSSQPAFGHLSSQPAFG-NSQPAFGNS 1347
            GS  AFG+   PAFG+   P+FG S + PAFG SS+ PAFG  SS PAFG +S PAFG S
Sbjct: 244  GSGGAFGASNTPAFGASGTPAFGASGT-PAFGASST-PAFG-ASSTPAFGASSTPAFGGS 303

Query: 1348 SSQPAFAISN-PGFTFGSTPLANNFQANTEDSMAEDGVQAVATPTPMPTFGQQPLTPPPS 1407
            S+ P+F  SN   F+FGS+P      A  + + A       +TP+P   FG    + P  
Sbjct: 304  ST-PSFGASNTSSFSFGSSP------AFGQSTSAFGSSAFGSTPSP---FGGAQASTPTF 363

Query: 1408 SGYMFGSTAPSPQAASPFQFGNQQ--NVPSPQNPSLFQASGSFNAPS 1422
             G  FG +           FG QQ  +   P  P++   +G+   P+
Sbjct: 364  GGSGFGQST----------FGGQQGGSRAVPYAPTVEADTGTGTQPA 366

[Close]

BLAST of Sed0010208.2 vs. TAIR 10
Match: AT2G45000.1 (structural constituent of nuclear pore )

HSP 1 Score: 63.2 bits (152), Expect = 2.0e-09
Identity = 141/391 (36.06%), Postives = 190/391 (48.59%), Query Frame = 0


Query: 1043 FPFSSSSTSFGLAGNTGLSSGSSLFGSSAPASNLFTSGTTLGLASSSSSASNSVSSGAGT 1102
            FPF  S+           S G   FGSS+  ++   S TT  L+ S + +SN  S+G G 
Sbjct: 4    FPFGQSN-----------SVGGFSFGSSSATNSSSASSTTSPLSFSFNQSSNPSSTGFGF 63

Query: 1103 SSSLSNW-QSSSTPSFSTGFSSTPTGVFSFGLSSSSTTSNSAPVVFGSSS--TGAATAPM 1162
             SS+S+   SS+TPSF  G SSTP+  F FG S+SS+T +     FGSS+  T A+T P 
Sbjct: 64   GSSVSSTPASSTTPSFGFGASSTPS--FGFGSSASSSTPSFG---FGSSASVTPASTTPS 123

Query: 1163 FSF-TSAASSQPA---FGNSTSQPAFGNSSSQPAFGNSSSQPAFGNSSSQPAFGTLSSQP 1222
            F F T+A+SS PA   FG+ST+  +     S P FG  +S  +   + S   FG  +S  
Sbjct: 124  FGFGTAASSSAPAPSLFGSSTTNASSAAPGSSP-FGFVTSSASSTATPSSSLFGAPASSA 183

Query: 1223 AFGTSSSQPAFDTSSSQPAFGTSS---SQPAFGTSSSQPAFGTSSSQPAFGSQPAFGS-Q 1282
            A  +SS   A   S S P FG+S    S P+  ++S+   FG SSS  A  + P FG+  
Sbjct: 184  ATPSSSPFGAAPASGSTPLFGSSPSLFSAPSSASASNSSLFGASSS-AATSTSPLFGAPS 243

Query: 1283 PAFGSQPSFGTSSSQPA-----FGTSSSQPAFGHLSSQPAFGNSQPAFGNSSSQPAFAIS 1342
             A G+ PSF  +SS P      FG + S P+F   SS  A G+S   FG + S P F  S
Sbjct: 244  SATGATPSFSVASSAPGSSSSIFGATGSSPSFSVASS--ASGSSPSIFGATGSSPFFGSS 303

Query: 1343 NPGFTFGSTP--LANNFQANTEDSMAEDGVQAVATPTPMPTFGQQPLTPPPSSGYMF--- 1402
            +   + GSTP   A++    T  S +  GV    + +   T          S+G+ F   
Sbjct: 304  S---SAGSTPSLFASSSSGATTSSPSPFGVSTFNSSSTSNTSNASASPFSASTGFSFLKS 363

[Close]

BLAST of Sed0010208.2 vs. TAIR 10
Match: AT1G59660.1 (Nucleoporin autopeptidase )

HSP 1 Score: 60.5 bits (145), Expect = 1.3e-08
Identity = 154/413 (37.29%), Postives = 203/413 (49.15%), Query Frame = 0


Query: 997  FGAPATADSNKQPVSSTFSQGNGTAFGAPVSPASSGPASSTQSTPVFPFSSSSTSFGLAG 1056
            FG+       +  +SS F     + FG   + AS+ P ++       PF  +ST F    
Sbjct: 2    FGSSNNNPFGQSSISSPFGTQTHSLFGQTNNNASNNPFATK------PF-GTSTPF---- 61

Query: 1057 NTGLSSGSSLFGSSAPASNLFTSGTTLGLASSSSSASNSVSSGAGTSSSLSNWQSSSTPS 1116
              G  +GSS+FG           GT+ G+  +  ++S   +S     SS   + +SSTPS
Sbjct: 62   --GAQTGSSMFG-----------GTSTGVFGAPQTSSPFGASPQAFGSSTQAFGASSTPS 121

Query: 1117 FSTG---FSSTPT-GVFSFGLSS------SSTTSNSAPV----VFGSSST-GAATAPMFS 1176
            F +    F  T T G  SFGLS+       STT  S P      FGSS+  GA+T P F 
Sbjct: 122  FGSSNSPFGGTSTFGQKSFGLSTPQSSPFGSTTQQSQPAFGNSTFGSSTPFGASTTPAF- 181

Query: 1177 FTSAASSQPAFGNSTSQPAFGNSSSQPAFGNSSSQPAFGNSSSQPAFGTLSSQPAFGTSS 1236
                ASS PAFG S +   FG +++ P FG +++   FG SS+ P FG  SS PAFG S+
Sbjct: 182  ---GASSTPAFGVSNTS-GFG-ATNTPGFG-ATNTTGFGGSST-PGFGA-SSTPAFG-ST 241

Query: 1237 SQPAFDTSSSQPAFGTSSSQPAFGTSSSQPAFGTSSSQPAFGSQPAFGSQPAFGSQ--PS 1296
            + PAF  SS+ P FG+SSS PAFG S + PAFG+S +  AFG+   F S  AFGS   P+
Sbjct: 242  NTPAFGASST-PLFGSSSS-PAFGASPA-PAFGSSGN--AFGNN-TFSSGGAFGSSSTPT 301

Query: 1297 FGTSSSQPAFGTSSSQPAFGHLSSQPAFGNSQPAFGNSSSQPAFAISNPGFTFGSTPLAN 1356
            FG S++  AFG SSS P+F +  S PAFG S  AFG+SS             FGST    
Sbjct: 302  FGASNTS-AFGASSS-PSF-NFGSSPAFGQSTSAFGSSS-------------FGST---Q 350

Query: 1357 NFQANTEDSMAEDGVQAVATPTPMPTFGQQPLTPPPSSGYMFGSTAPSPQAAS 1393
            +   +T       G QA  +     TFG Q        G      AP+   AS
Sbjct: 362  SSLGSTPSPFGAQGAQASTS-----TFGGQSTIGGQQGGSRVIPYAPTTDTAS 350

The following BLAST results are available for this feature:

BLAST of Sed0010208.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022956154.1	0.0e+00	66.78	nuclear pore complex protein NUP1-like [Cucurbita moschata]	[more]
KAG7032922.1	0.0e+00	66.51	Nuclear pore complex protein NUP1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023527371.1	0.0e+00	66.46	nuclear pore complex protein NUP1-like [Cucurbita pepo subsp. pepo]	[more]
KAG6602242.1	0.0e+00	66.58	Nuclear pore complex protein NUP1, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_038884354.1	0.0e+00	66.62	nuclear pore complex protein NUP1-like isoform X2 [Benincasa hispida]	[more]

BLAST of Sed0010208.2 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CAF4	2.0e-78	32.80	Nuclear pore complex protein NUP1 OS=Arabidopsis thaliana OX=3702 GN=NUP1 PE=1 S...	[more]

BLAST of Sed0010208.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GY88	0.0e+00	66.78	nuclear pore complex protein NUP1-like OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A6J1JSL2	0.0e+00	66.10	nuclear pore complex protein NUP1-like OS=Cucurbita maxima OX=3661 GN=LOC1114871...	[more]
A0A6J1FKS9	0.0e+00	64.90	nuclear pore complex protein NUP1-like isoform X2 OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1FF52	0.0e+00	64.72	nuclear pore complex protein NUP1-like isoform X1 OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1K059	0.0e+00	64.49	nuclear pore complex protein NUP1-like isoform X2 OS=Cucurbita maxima OX=3661 GN...	[more]

BLAST of Sed0010208.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G10650.1	1.4e-79	32.80	BEST Arabidopsis thaliana protein match is: nucleoporin-related (TAIR:AT5G20200....	[more]
AT1G10390.1	3.4e-12	38.82	Nucleoporin autopeptidase	[more]
AT1G10390.2	3.4e-12	38.82	Nucleoporin autopeptidase	[more]
AT2G45000.1	2.0e-09	36.06	structural constituent of nuclear pore	[more]
AT1G59660.1	1.3e-08	37.29	Nucleoporin autopeptidase	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..91
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1171..1349
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..18
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1372..1423
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 900..925
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..45
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 406..442
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1171..1451
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 423..442
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 969..1040
None	No IPR available	PANTHER	PTHR33416:SF20	NUCLEAR PORE COMPLEX PROTEIN NUP1	coord: 1190..1449
None	No IPR available	PANTHER	PTHR33416	FAMILY NOT NAMED	coord: 1..1195 coord: 1190..1449
None	No IPR available	PANTHER	PTHR33416:SF20	NUCLEAR PORE COMPLEX PROTEIN NUP1	coord: 1..1195

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0010208	Sed0010208	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0010208.2-five_prime_utr	Sed0010208.2-five_prime_utr-LG11:30146569..30146732	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0010208.2-exon	Sed0010208.2-exon-LG11:30146569..30147009	exon
Sed0010208.2-exon	Sed0010208.2-exon-LG11:30148398..30148444	exon
Sed0010208.2-exon	Sed0010208.2-exon-LG11:30149548..30149663	exon
Sed0010208.2-exon	Sed0010208.2-exon-LG11:30150011..30150206	exon
Sed0010208.2-exon	Sed0010208.2-exon-LG11:30150341..30150631	exon
Sed0010208.2-exon	Sed0010208.2-exon-LG11:30150726..30150824	exon
Sed0010208.2-exon	Sed0010208.2-exon-LG11:30150916..30151650	exon
Sed0010208.2-exon	Sed0010208.2-exon-LG11:30152736..30153403	exon
Sed0010208.2-exon	Sed0010208.2-exon-LG11:30153528..30155912	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0010208.2-cds	Sed0010208.2-cds-LG11:30146733..30147009	CDS
Sed0010208.2-cds	Sed0010208.2-cds-LG11:30148398..30148444	CDS
Sed0010208.2-cds	Sed0010208.2-cds-LG11:30149548..30149663	CDS
Sed0010208.2-cds	Sed0010208.2-cds-LG11:30150011..30150206	CDS
Sed0010208.2-cds	Sed0010208.2-cds-LG11:30150341..30150631	CDS
Sed0010208.2-cds	Sed0010208.2-cds-LG11:30150726..30150824	CDS
Sed0010208.2-cds	Sed0010208.2-cds-LG11:30150916..30151650	CDS
Sed0010208.2-cds	Sed0010208.2-cds-LG11:30152736..30153403	CDS
Sed0010208.2-cds	Sed0010208.2-cds-LG11:30153528..30155454	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0010208.2-three_prime_utr	Sed0010208.2-three_prime_utr-LG11:30155455..30155912	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0010208.2	Sed0010208.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071763	nuclear membrane organization
biological_process	GO:0016973	poly(A)+ mRNA export from nucleus
cellular_component	GO:0005635	nuclear envelope