Cucsat.G4305 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G4305
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	BED-type domain-containing protein
Location	ctg1170: 163516 .. 165347 (+)
RNA-Seq Expression	Cucsat.G4305
Synteny	Cucsat.G4305

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCTCCTTCCCTATAACTCTAAATCAATTCATCTTATGGAGTTAATATGACTTTTCGAAGAATTGGACAATAACTCAAATGCTTCTAAAACTCGAATCTAGCGTCGAAAAGTAATGGGTAATGTTAAACTCAAGTCTAAAATAACAGGTATTCAAAATCACCTAACAAAACAATCTCGAAAACACAAAAATCTTACTCTAGAAGTTGAATCTGAACGAAGAATGGAGACAAACCACGATGAACTTGATTTCCAGCGAGCTATTGCGCACGGTGACTGGGATTCACTGTCGAGTTCAACGGTGGAAGGGATGTTGGGTGGTGGCGTCGGCTGAAGGAGAGAAAGAGGGGGATTTCGAGCATGTCTTCGATAAAAAGTCACGTCGTTCCCAACGTGCGTGAGAGAGGGAGAGAGATGGTTAGCTGGATGAAGAAGAAGAGGAAGAAGAAGGGTTTTGAGATATTTTATATATTTCAATAAATACATTATTTACTAGTTTTAGAATTAGGGAAAAATCTGATTTTAATAAACTTTATTTTAATAAATTAAATAAATTCGTTTATTACTCCGCTTTGAATCCTCTCTTATCATCATTTCAAAATTAATCCTAAAATTCATTTATTAGTCCGCTTTTAATCTTATTTTTGACAATTTCCTTGAAAACTTCTACCATCTCGAAGATTTTTAGAATTTCAACTACACTTACCGATGAACACTAAATAGACATCGATAGATGTACTTAACACCTATATTTCCCTTGAATTTTCGGGGTGAGAATATAGTCCGTAGATATAGACTCTTCGGAAATTTTAACTAATCTCCTATCCGTCGAGCCACGGTCTTACACAATCGGGATCGAAACAAAAGGAATGAAAAGAAACACAAAACCCTAATTTCGCCTTTCAGTCAGCGACGTCACTTTTCTCTACCAACATATCCCGGCGGACACCCAGTTCACAAGTAGCTCCGGCGGCGGCGCGGTTCATAGATCCTCGAACGACCACGGGGAGTCCCAGAGCGGCACGATTTCTTGATCTGCATTGACCAGCTATATCTGTACGCCGCGATTCCGAGCCACAACCCTGCACCGACGCCCATTTCGATCATTCAACTTGTTCTTCTTCTTCTTATTCTTCTTCTTTTTTTAAATTCCATTGTAGCATCTATTTATTAATCTAGCTGCTCTTACTCTCGTATACAATGACAGATACAGGCGATACTCAGCCGTCTGAACAAGGTATTAGGGGTTTTTGTTTCGTTCCATTCCTTTTATATATGCATATAGATTTACCTATTTTCATCATGGGTTCTTTGTTTTGTGTCTCCAATTTTTTTCATTGTTGTCGCTCTCTCTAGATACGTTTTTAATCCATTTTTCTTCAGTCTGTAGCTTCTTCAGAAAACCCACCAAAAACAAAAACATCAGGAAGCGGACGGTTGATGAAGACGAAGAGGAGGACTCTAAAGCTGAGACTTCGTTTCTGCTAAATCAGAAGAAAGCCCCTAAGACTGAAAGCAAGCTTTATTTTTCTTCTGGGCCTTCTAAAAATTCATCGTCTAATGAGTCCAATGTGGAACCTAATAAACCAATTTTCCAATTTGAGTCTTCAAAGGAAATTCAAGTTCACCATGATAGCAGAGCAACTGCAACTCTAGAAACAGAGACTGATTTCTCAAGAGATGCACGAGCCATCCGTGAGAGAGTTTTGAAGCAAGCTGAGGAGGCTTTGAAGGGGAAAGGCAAGAGCTCTGGTGGTGAGAAGTTGTATAAAGGGGTCAATGCTTATGTTGATTACAAGGCTGGCTTCAGAAGGGAACATACAATTTCTAGTGAAAAAGCTGGTGGAGCACATGGGCCGCTTAGAGCTTCTGCTCACATAAGAGCATCGGCAAGATTTGATTATCAGCCTGATATTTGCAAGGATTACAAGGAGACTGGTTACTGTGGTTATGGAGATGCGTGCAAGTTTATGCATGACCGAGGGGATTACAAGTCTGGGTGGCAGTTGGAGAAGGAATGGGAGGAAGTAGAGAAAGCAAGAAAGAGAAAATTAGCTATGAAATCTGATGATGGGGATGAGGATACTTCAGAACAAAGTGATGAAGATGAAGAAGATGCGTTGCCCTTTGCTTGTTTTATTTGTCGCGAGCCTTTTGTGGATCCTGTTGTGACAAAGTGCAAGCATTACTTCTGTGAGCATTGTGCACTAAAGGTAGTTGCTCTCTCTTTGTCTTTACTTGTGTCTTAATTATATTGTGATCATGAAGTCATTTCTTCTCTAGGAGATCAAAACGTGCTTCAGAGTTCCTTATATGCTGATGGTTTACCTTCCTCACTAATATATTTATATATACTTGAAATTGAGAAAAAATTTTTTGTTGTGAAAATGAAGAAAAAAAATAATTGTCTGCTTACATACTTTCTCTGCCGTATTTGTTCATTTACATTGACTTACCATAGCATTTTTTCTAAAGTAAACCTATTTATGATGTTTTTTATATTTAGAAATACAATGTTTTTTAAAAAACGAAGGATAATTTTAAAGTAAGAGATAGATTGTTTATTAGAATTATTTTGAAAAATAATTCACCTATTCGACCAGGTCTTACCTGAACAGAATCTATTCTATTTGTTTTGCAACTGTATCCTTGAGTTCGTAAAAATGTCCATCCATTCATGTTGTTGTTCTTGCTCGTTACTGTTGCAGTGACCTATTATTATATTTTCTATAAAGGATTTTCCAACTATGTTAAGTTTTTTCTATAGAACATTATATGTTCCAATTATATTTTGTAATTTAGGGGCCGTTTTGGGGCACCAAAAAGAAGTTGGTAGAGTGGGTTATTATGTTCCAACCCATGTTTGGGGCACCAAATATAATAGTGGTGTATACAAGTATTTATAGCTGTTAAAAGGTAGAAAATAGAACACACAAGGTTTACGTGGAAAACCCTAGAATAGGGAGAAAAAACCACAATTGGGACTTGGCAGTCTTTTATTATTTTCAAAAACAAGGGAAGTTACAAAAGAAGAAAACTTTATAGGCTTTAGCTAGCCCTAATACAAAAAAATAAATAAACTTATGGTAAAGTGAAATAATAAAATACCCTCAGGGCTATAAACTATCTACAAAGCCCATTATTTCCAACATTCTCCCTCAAGTTGGGGGTAGATGTCAATCAAACTCAACATGCTAACACGTGAGTCAAAACTTGACCTGAGTAACCCTTTGGTGAGAACGTCAGCAACTAGTTGACAAGATGAATTCTACATAATACAGATACTTCCACTGTTCCGTTTCTCTTTTATAAGGTGTCCGTCAATCACCACATATTTCGTTCTATCATGTTGTACAAGATTATTGGCTATGCTCATGGTCGCTTTATCATCACAATAGAGATTCGTAGGTAAAACACAGTCTTGGTGAAGATCAGACAAGATTTCTTGAACCAGACTCTTAGCTTTGTATTAAGCTTCAACACTACTTCTAGCAACAACATTTTGCTTCTTACTTCTCCAATTAACTAAGTTACCTCACTCAAAAGTACGATATCCAGAGGTAGATTTTCTGTCAATAATTGATCCTATCCAATCAGAGTCGGTATAAGCATCAATGAATTTACCATTTACTTGGAGAACTTCTCAAATATTTCAGAATCCGATTCATAGCTTCCATATGTTCTTCGTAGGGTGTGTGCATAAATTGACTAACAATACTGACAACATAGGAAATATCTGGTATAGTGTGACATAAGTAATAGAACTTTCACAGGATTTTGTTCTATCATTGTCTAATTCTGCATTGAACTCAATAGGGGTGTCAGCAGATCTACATCCAGTCATACTTGTTTCTTTTAATAGGTCAAGGGTGTATTTCCGTTGTGAGATAGAGATCCCTTCCCTTGATCTTGCCAGCTTCATTTCTAGGAAATATTTTATATTCCTTAGACCATTGATTTCAAATATGTTAGCCATTTTCTTTTTCAGACTGGTGATCTCAGCCGTATCATCTCCTGACAAGACAATATCGTCTACATCGAAAAAGAAGTCTTACCCAAACTCCAATCTCTTCATTGAGAAAGAAGAATGTGCCAGATTTTGACTCTCCTTTTAGTGTGAGGAGTGAGGAAGTCGAACATATGCCAAAGACAGTAGAGAAGGATGACTAGTCGTTGAAGGATCCTTTAGAATATGATCTCAATTTCCTACTTCAAACAGAGGAAGATTTAATTACTGAGACGTAGGCCTCTTTATTACTCTCACAAGCTAAGCACTGAAATTTCAGATCTCTTGAAGTTCATTGTTGAGAAATGTGGAAGTATTTTGGTTTGAGTACAAAATTTAGACTTTATCTTGTTTTTTCATTCATTTATTTTTGAAGTCTTTTAGTGGACCATGAAAGGTTCGACAGATGCTTCTATTATTTTGGCCCTCAAAAGTTCTTGTGAAATATTTCGGTCCTAGTTAGTCACTCAAGATTTAAGGACTATTAGGAGGCATATTTTTTAAACAATACACAACTTGAAGCTGGGTGGTTGTTTGCTCTCCCTTGGTGTTTTCTTCTCAACGATTTTGAAGTTTTTAGTGTGCATTCTTTAGCTATTTTGGGATTCTTGTTGAAAGAATTTTAAGTTTGCTTTGTTCTTAGTAGTTTTCTATTGTTTTGCCCAAGATTGGGCTTTTCATTTGGAGGACGTTTTCTGTCAATGGTTGGTCTACTATGTAACTTTCAACAGTGTTATTTCGTATGCTAGGGTTTCTTGCAATGTTCACACACCGTGATCTGTTTCCCTTTATGCTTGTCACTGTTAGAACCAGATAATTTCGCTCTAAAAGCAGCAGAATCTGTAGCATATACAACATTGACTGTTTCCCTTGAGGCGTACCTTAGAACACAATTCCATAACATAAGTTATAGGCCTTTGTCTCAATATACAGCTTCGTTCTACATCTTGGAGATCAAACCAACTAGGAAATCATAAACACAATCGACATCCTTAATCTTGGAATACTGGACACCTCCACATGGACTATCCCAGATAATTTCACGACATAGATCCATCTCCGGCCAGATTAGGGACAATTTGTTTTAAGTATGAAGTGACATCCATCGTCCCCTGTTTGCACTCATGAGCTTGTTTACATTGAATGTACAGACGAGTGCATTCTATCATTTAGAAAATAATTTTCGAATTGTATCCCAGATATCTTAAGCAGTAGCAACTTACAACAATAGTTTTCCTATCTAAGGTTTCATACTATTAATCGACAGTGGGCGAAGTAATTAGTCTTCTCTTTTCCAAACGCGCTTCTGAGTATCATCTGGTCTAGGTCCTGGCAGTGTTTTAAAAAGCGCCCTAAGGCGCGCGCCTAGGCGCGCCTAGGCTCAAGGCGCCCACTTGGGGCTTATTTGTGAGGAGGCGCAGCGAATTATAAAAAGCCCATATTAGGCGCGCGCCTCCCTTGAGGCGCGCCTAGGCGCAAGTCGAATTAGGCGTGGGCTTTTTTTTATAAGTTATGGGCTGGGCTTTAATTATAAAAAACTATTATTATTTAGGTTTTTTAAACCTATTACGTAAACGTGAAGAAAGAACCCTTCTCCTTTCGCGCGTGAAGTTTCTTCAACACGACTCTTCATCTACTTCTTCAGTTCTTCGTCTTCCGTTCTGCTTCTACTTCAGTTCTTCGTCTTCGTCTTCCGTTTGCTTCCTTTTCCACCCTTCCATTCCGGCCACCCTTCTTCTTCACACAAAACGAGTGCTGCGGCTGCCATTACTCTGTTTTTTGGTGCACACGACTCTTCATCTACTTCTTCAGTTCTTCGTCTTCCGTTCTGCTTCTACTTCAGTTCTTCGTCTTCGTCTTCCGTTTGCTTCCTTTTCCACCCTTCCGTTCCGGCCACCCTTCTTCTTCACACAAAACGAGTGCTGCGGCTGCCATTACTCTGTTTTTTGGTGCAAAAACAGAGGAAAAGAGAAGACAATAATATTCTGTGCTACAGTGCTGCTAGTGCTTCAGTTTTCGCCTCCTCCATCTCAGCTTTATCACGGGTTAGTATCTCAATCGTTCAGTTAACATCTGCATTGCTTTCTCCTTCTTCTGTAACTCTTTGACAAGAACATCAAACTCCATTGTTTTCTGTTTTCATAGCATGGTATACCCATTGAGTTAGAAAAAACTCTCTAAAGTCTACATCTTCTTCTTCTTATACTTCTCAACTTCAACTTCCTTCGATAACCCATCAAACTCAACCTTCATCCCATCCATCTCACAACACACTCCCCTCCAATCCTCCATTTATAACAACTTCATCCCATCCATAGATAGCTTCTGTTTTTTTTTTTTTTAATAACAGCTGCTGTTTTAAATAGTTTCTGTTTTTTTTTTTATAACTTAGATCATAGATGGCTGATGAAAGTTCGAGAAAAGATCCGGCATGGAAATATGGTCAATTGCAAAATGACCAAAATATAAATACGTTTGTCTGTGGATTTTGTTCGAAAGTAACAAAAGGAGGGGTATATAGAATGAAACAACACCTCGTTGGTGGTTATAGAAATGTCACCGCCTGTACAAAATGTCCAGATCACGTGAAGGAAGAAATTAAAGAGTACATGTCCAAGAAAAAAGATATTAAAGAACAAAGAAATCTGATTGTGGACATTGATGTAGAAGATTATGATATTGAGGATGAAGATGAAGGGAGTGTTAGTGTAAACAACAAAGCAACACCAAGGGGCCCGAGCTTGAAGAAGCCAAGGCAAAAGGGTCCAATGGATGCATTTTTTACTCCTAACCCAGAAACTGTGGTTCAAAATAGAAAGGACAAAGGAAAACAAACTTCATTGAATGCGACATACAAGAAGGAAATGAGAGAGCACACCATCCAAAGAATTGCTCGATGGTTTTATGATGCAGGAGTGCCTTTGAATGCAGCGGGGTATTATTTAAACCCGTCATTCTATTATTCGAATCCTAACATCCAGGAGGATGATGAAATAGTTAATGGACTCTACTCATGCATAACGAAAATGGTTGCTTCATTGGAAGTACAAGACAAAATACTTGCAGAACTAAGCAAGTATAAGAGGGCTGAAGCATTATTCGGACAACCTTTAGCAATCAGACAAAGGGACAAAATATCTCCAGGTAAATTTCAACTAAACGATTATTCAACGATACTAGCAACAAGCTCTTCTATTAATATATATATTTTTTTGTTTGTGCCTATAGTGGAATGGTGGGATAATTTTGGACAATCAACTCCAAACTTGCAAAAGTTTGCTGTGAGAATTTTAGGTCTTACTTGTAGTGCTTCTGGATGCGAGCGTAATTGGAGTGTGTTTGAACAGGTTACCTTTCCTCTCCTTAAATACATTGAGAATGATAATCAAAATTTGTTGATTCACTAACAATGAAACTTTCTAATTTTTCAGCTTCATAGCAAGAAACGAAATAGGCTTGCTCAAAGTCGTTTGAATGATCTAGTGTTCATCAAATACAACAGAGCACTAAAACGTCGATACAACCTACGAGATATTGTCGACCCCATCTCCTTGAAAGATATTGATGATAGTAATGAATGGTTGATTGGAAGATTGGATGACGATTCTGAGGAGGATGATGAGTTGGTATTTAATGATGATTCTTTAACGTGGGGTGATGTTTCTAGAGCTGTCGGAGCAAAAGAACCATCATTCTATTCTAGAGCTAGTACCTCTAGACCAAAGACTATTGTTTCATGTTCATCCTCGTCTACCACGCAACGGAAACAAGTAAATTTAGATGACTTCGATTTGGAAGAAGAAGATACTGATGGCTATAAGTCTAACGAAGGATTGAATGAAGACGAGGATCAATTTAGTGATGATGAGTTTGATCTTTAGGGATGAACTTTTATTTTGATTATTGACTTGTTGAATACTGGGTAGTTTTTTGTTGTGTTTTGTTGTTTAGGCTACTTATATTGGGTACCTATATTTTATACATTGTTGCTCTGCTATATGTGTGTATATATATTTTCTTCTCTTTTTATATATAGTGCGCCTTATGAAAAAAAGCTCGCGCTTTTTTTTGCGCCTTGCGCCTAGGCTCCAGAGGACCAATGCGCCTTAGTGCGCCTTGAGCCTTTAAAAACACTGGGTCCTGGTGTCTCACCAATTAGATACCCAAACTTGTGACGCCTCTCAAGGACCATTTTAATTGACTGAGACCAGGAGAAATAATTCTACCATTCAACTTCGCAGTATTTAACCCTGTGAAACTTTCCGAAGAGCCAGACAAATAGTTTGCAGTAGTTAAAGTAGGGAAAGAGGTTACCGGATTCCTTGGATACATCAGTATACCAGAAGTAATGCTATAATTCACTGTACTGGAATATAGGTTTGTGGAATCACCTAGGGCTACCCCAAGAGCAGCGATTTGTTGCTGAAAACTTGTCTGAAGATTAGACAACAAGATTAGCCAACTGTTGTAGTACCATTACCGGGGATAAACCAACGAAGCTTGATGTTCATTACTAGGTGATACATGATGAAGAAGACCTTGTTGCTGCAGCAGGGAATTTACCTTTGTGTTCAACGAATGACTCACTAATCTCGGTTCATGGTGTATATTCTGACTAAGGTTTCCATCAAAGGGTTGCGGCAATGCTAGAATTAGACAGAAGTGCAAGGACTGAAGATAACAATCAACAATGGCTTGGACTGCAGTGGAAAAGTTGGTGGTTTTGACAGCTGCAGCAGCTACGGTTGAAGCAAAACTGGTGCCTAACTAAAGTTATCTTGCACTGGTTGGTTTTTGTCAATGTCGGCTAGGGTTTTTTCACTACTCTCTGATGCCTTGTTGAGAGGTAGAAAAGAGAATACACAAGGTTTACATGGAAAATCCTAGAATAGGGAGAAAAAACCATGGAGTCTTTTTTGTTAAAAGGAAGACAACTTTATAGGCTCTAGCAAGCCCTAATACAAAAAGGGAAATAAACTTAGGGTAAAGTAAAATACTAAAATACCTTGAGGCTATAAACCATCAACAAAGCTCCTTATTTCCAACAATAACCTACAATTAAGTATAATAAATCCTCTTTCAAAACTTTATTTCCTAGCGTGTTGACTATTTATTGTGTATTTACTACTTGTTACTCATCCTCTATTCTTCTCTTGGCAATGGTGTTATTTCCTACCCAAACAAAATTAGTTTACACTCCAAATACAAACTGTTATGATCCAAATTAAAATTGTTGCACCTGAACACTATTATAACCCAACAACTATAATAACCATTGCTTTCAATAACCAACTCAGTGGCCAGCCCCTCAACCACTCCCAAAGTTTTTCCTGGCATGCATTATCGTTAGCAAATGTTAATAGGGAACGCAGTGGCTGAAGTATTTGGATAATTTTTGTAAGTTTGGTGATTGTTTCACTGATGTTGATTTAATATCTTTGCATGTCTAGAGTACATTTCCTTTACTGCAAAACTCAGTATATTTTTTATTTGTATATCTAGGGCATACTTGTAGATGATCATTTCATCCTACATCATCACATACTTCATTTTTTCCCTCTTTTCCTGGTATTTCATGTTACTTATCTTATCTTTAGAATGAATCTAAAATCATTTTTTGTTAATAAAAATTTGCAGCACCATGCAAAGAATAAGAAATGCTTCGTTTGCAACCAGCCTACTCTTGGAATCTTTAACACGGCACATGAGATACGCAAAAGGATGGCACAGAGTAAATAAGTTTTTCTCCCTGATCTGCATTGGTCCCATACCACAGTATTTTGATTTGTAGCATGATTATCTATCTGTATCTTAAAATCAATAACCTGTTGGAGAAGCTTGGATAGTATTTCTTGAAGTATGGCCAATGGGAATGGTCAGTTTTGGAAGTAGTTTTGATGAAAAAAGAAAGACTCTTTCTGTTAAAGTTCATTCTGAATTGGATGATATCTTTTGTAAATAGCCAGAGATACTTCTACTCTACCTGCGTTCCTATAGCTAGAAATTTAAGGTAGATGGTCCGAAGAGATTTTAAAGCTGGACTCTTTATTGAACTTAAAAGTGTTTATATTGTACCCCAGCCTTATCAAATTGTATAATCGAGTATTAGTTTTAGTTTGTCTGTGTTTACTAGTACTCATTTTCACTTTCCAGAGACACAAATATGTGATGAAAAGGAGCCTGCCATAGTGGAACTTTTGTAAAGCATGTGTGGGTATGTGGAAAATGTCTTTGTTCATTATTTTGTACTATTGTCGTTGAAATCCACAGTTATTAGTACGAGCAATCTGAAATAAGAGTAAGGCGAGATACGGATTGGAGATTGAATTAATATTTTAGAATGGAAGTTTTAATTACTGATAATTTGTCTATATTAAGTGTAAGCGGTAAGAATGGGAGCATCAACTTGATGTGATAAAGAATGGAAGAAAGTTTCTGACACTTGTAGTACTGGAAGGCTTCGTTTAGGATACTGAAAATTGCAGAATAATCTCGAAGAGTCTTTATATGAAGAGCTATAAATTTTGGTTGATCATATTTTGATGACACTTCCTGTGTTGGTGCTAAAAAAATCTTTGTTGTGGTATCATCGTATTCT

Coding sequence (CDS)

ATGACAGATACAGGCGATACTCAGCCGTCTGAACAAGTCTGTAGCTTCTTCAGAAAACCCACCAAAAACAAAAACATCAGGAAGCGGACGGTTGATGAAGACGAAGAGGAGGACTCTAAAGCTGAGACTTCGTTTCTGCTAAATCAGAAGAAAGCCCCTAAGACTGAAAGCAAGCTTTATTTTTCTTCTGGGCCTTCTAAAAATTCATCGTCTAATGAGTCCAATGTGGAACCTAATAAACCAATTTTCCAATTTGAGTCTTCAAAGGAAATTCAAGTTCACCATGATAGCAGAGCAACTGCAACTCTAGAAACAGAGACTGATTTCTCAAGAGATGCACGAGCCATCCGTGAGAGAGTTTTGAAGCAAGCTGAGGAGGCTTTGAAGGGGAAAGGCAAGAGCTCTGGTGGTGAGAAGTTGTATAAAGGGGTCAATGCTTATGTTGATTACAAGGCTGGCTTCAGAAGGGAACATACAATTTCTAGTGAAAAAGCTGGTGGAGCACATGGGCCGCTTAGAGCTTCTGCTCACATAAGAGCATCGGCAAGATTTGATTATCAGCCTGATATTTGCAAGGATTACAAGGAGACTGGTTACTGTGGTTATGGAGATGCGTGCAAGTTTATGCATGACCGAGGGGATTACAAGTCTGGGTGGCAGTTGGAGAAGGAATGGGAGGAAGTAGAGAAAGCAAGAAAGAGAAAATTAGCTATGAAATCTGATGATGGGGATGAGGATACTTCAGAACAAAGTGATGAAGATGAAGAAGATGCGTTGCCCTTTGCTTGTTTTATTTGTCGCGAGCCTTTTGTGGATCCTGTTGTGACAAAGTGCAAGCATTACTTCTGTGAGCATTGTGCACTAAAGCACCATGCAAAGAATAAGAAATGCTTCGTTTGCAACCAGCCTACTCTTGGAATCTTTAACACGGCACATGAGATACGCAAAAGGATGGCACAGAGTAAATAA

Protein sequence

MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLYFSSGPSKNSSSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERVLKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRASARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKSDDGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVCNQPTLGIFNTAHEIRKRMAQSK

Homology

[Close]

BLAST of Cucsat.G4305 vs. NCBI nr
Match: XP_031745317.1 (uncharacterized protein LOC116405444 [Cucumis sativus])

HSP 1 Score: 776 bits (2004), Expect = 1.19e-274
Identity = 465/840 (55.36%), Postives = 465/840 (55.36%), Query Frame = 0


Query: 1   MADESSRKDPAWKYGQLQNDQNINTFVCGFCSKVTKGGVYRMKQHLVGGYRNVTACTKCP 60
           MADESSRKDPAWKYGQLQNDQNINTFVCGFCSKVTKGGVYRMKQHLVGGYRNVTACTKCP
Sbjct: 1   MADESSRKDPAWKYGQLQNDQNINTFVCGFCSKVTKGGVYRMKQHLVGGYRNVTACTKCP 60

Query: 61  DHVKEEIKEYMSKKKDIKEQRNLIVDIDVEDYDIEDEDEGSVSVNNKATPRGPSLKKPRQ 120
           DHVKEEIKEYMSKKKDIKEQRNLIVDIDVEDYDIEDEDEGSVSVNNKATPRGPSLKKPRQ
Sbjct: 61  DHVKEEIKEYMSKKKDIKEQRNLIVDIDVEDYDIEDEDEGSVSVNNKATPRGPSLKKPRQ 120

Query: 121 KGPMDAFFTPNPETVVQNRKDKGKQTSLNATYKKEMREHTIQRIARWFYDAGVPLNA--- 180
           KGPMDAFFTPNPETVVQNRKDKGKQTSLNATYKKEMREHTIQRIARWFYDAGVPLNA   
Sbjct: 121 KGPMDAFFTPNPETVVQNRKDKGKQTSLNATYKKEMREHTIQRIARWFYDAGVPLNACTY 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 ESFAPMIESIGQFGPGLKPPSYHELRVPCLKKELEATNELMSNHKVEWAKVGCTVMADGW 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 TDRRNRTLINFLVNSPKGTMFIESIDASFYVKDGKKMFELLDNFVDQIGEANVVQVVTDS 300

Query: 301 ------------------------------------------------------------ 360
                                                                       
Sbjct: 301 ASANVMAGRLLEAKRPQLTWSPCAAHCLDLMLEDIYKISNIRKALKRGIEISNFIYVRPG 360

Query: 361 ------------------------------------------------------------ 420
                                                                       
Sbjct: 361 LLNMMRRFTNQKELVRPAKTRFATACITLSSIHRQKNNLRKMFTSDEWKDSKWSKEQQGK 420

Query: 421 ------------------------------------------------------------ 465
                                                                       
Sbjct: 421 RVVQTILLASFWTTIVFALKVSGPLVRVLRLVDGEKKPPMGYIYEAMDRAKEAIAKSFNN 480

[Close]

BLAST of Cucsat.G4305 vs. NCBI nr
Match: XP_031741477.1 (uncharacterized protein LOC105435633 [Cucumis sativus])

HSP 1 Score: 719 bits (1857), Expect = 1.91e-253
Identity = 435/794 (54.79%), Postives = 435/794 (54.79%), Query Frame = 0


Query: 1   MADESSRKDPAWKYGQLQNDQNINTFVCGFCSKVTKGGVYRMKQHLVGGYRNVTACTKCP 60
           MADESSRKDPAWKYGQLQNDQNINTFVCGFCSKVTKGGVYRMKQHLVGGYRNVTACTKCP
Sbjct: 1   MADESSRKDPAWKYGQLQNDQNINTFVCGFCSKVTKGGVYRMKQHLVGGYRNVTACTKCP 60

Query: 61  DHVKEEIKEYMSKKKDIKEQRNLIVDIDVEDYDIEDEDEGSVSVNNKATPRGPSLKKPRQ 120
           DHVKEEIKEYMSKKKDIKEQRNLIVDIDVEDYDIEDEDEGSVSVNNKATPRGPSLKKPRQ
Sbjct: 61  DHVKEEIKEYMSKKKDIKEQRNLIVDIDVEDYDIEDEDEGSVSVNNKATPRGPSLKKPRQ 120

Query: 121 KGPMDAFFTPNPETVVQNRKDKGKQTSLNATYKKEMREHTIQRIARWFYDAGVPLNA--- 180
           KGPMDAFFTPNPETVVQNRKDKGKQTSLNATYKKEMREHTIQRIARWFYDAGVPLNA   
Sbjct: 121 KGPMDAFFTPNPETVVQNRKDKGKQTSLNATYKKEMREHTIQRIARWFYDAGVPLNACTY 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 ESFAPMIESIGQFGPGLKPPSYHELRVPCLKKELEATNELMSNHKVEWAKVGCTVMADGW 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 TDRRNRTLINFLVNSPKGTMFIESIDASFYVKDGKKMFELLDNFVDQIGEANVVQVVTDS 300

Query: 301 ------------------------------------------------------------ 360
                                                                       
Sbjct: 301 ASANVMAGRLLEAKRPQLIWSPCAAHCLDLMLEDIYKISNIRKALKRGIEISNFIYVHPG 360

Query: 361 ------------------------------------------------------------ 420
                                                                       
Sbjct: 361 LLNMMRRFTNQKELVRPAKTRFATACITLSSIHRQKNNLRKMFTSDEWKNSKWSKEQQGK 420

Query: 421 ------------------------------------------------------------ 465
                                                                       
Sbjct: 421 RVVQTILLASFWTTIVFALKVSGPLVRVLRLVDGEKKPPMGYIYEAMDRAKEAIAKSFNN 480

[Close]

BLAST of Cucsat.G4305 vs. NCBI nr
Match: KAA0047882.1 (hypothetical protein E6C27_scaffold133G001550 [Cucumis melo var. makuwa])

HSP 1 Score: 667 bits (1721), Expect = 5.15e-234
Identity = 394/714 (55.18%), Postives = 416/714 (58.26%), Query Frame = 0


Query: 1   MADESSRKDPAWKYGQLQNDQNINTFVCGFCSKVTKGGVYRMKQHLVGGYRNVTACTKCP 60
           MADESS+KDPAWKYG+LQNDQ+INTFVCGFCSKVTKGGVYR+KQHLVGGYRN  AC KCP
Sbjct: 1   MADESSKKDPAWKYGRLQNDQDINTFVCGFCSKVTKGGVYRLKQHLVGGYRNAIACKKCP 60

Query: 61  DHVKEEIKEYMSKKKDIKEQRNLIVDIDVEDYDIEDEDEGSVSVNNKATPRGPSLKKPRQ 120
           DHVKEEI++YMSKKK+IKEQRNLIVDIDV+DY +EDEDEGS+SVNN+AT  G SLKKPRQ
Sbjct: 61  DHVKEEIRDYMSKKKEIKEQRNLIVDIDVQDYGMEDEDEGSISVNNRATSSGSSLKKPRQ 120

Query: 121 KGPMDAFFTPNPETVVQNRK-DKGKQTSLNATYKKEMREHTIQRIARWFYDAGVPLNA-- 180
           KGPMDAFFTPNPE+VVQNRK DKGKQTSLNA YKKEMREHTIQRIARWFYDAGVPLNA  
Sbjct: 121 KGPMDAFFTPNPESVVQNRKNDKGKQTSLNAAYKKEMREHTIQRIARWFYDAGVPLNACT 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 YDSFAPMIESIGQFGPGLKPPTYHELRVPCLKKELEATNELMSSHKAEWAKVGCTVMADG 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 WTDRRNRTLINFLVNSPKGTMFIESIDASSYVKDGKKMFELLDNFVERIGEANVVQVVTD 300

Query: 301 ------------------------------------------------------------ 360
                                                                       
Sbjct: 301 SASANVMAGRLLEAKRPQLIWSPCAAHCLDLMLEDIYKISNIRKALKRGMEISNFIYVLS 360

Query: 361 ------------------------------------------------------------ 420
                                                                       
Sbjct: 361 GPLVRVLRLVDGEKKPPMGYIYEAMDRAKEAIAKSFNNNKEKYKDIFTIIDRRWELQLHR 420

Query: 421 ----AGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKRAEAL 465
               AGYYLNPSFYYSNP+IQEDDEIVNGLYSCITKMVASL++QDKILAELSKYKRAEAL
Sbjct: 421 PLHAAGYYLNPSFYYSNPSIQEDDEIVNGLYSCITKMVASLDIQDKILAELSKYKRAEAL 480

[Close]

BLAST of Cucsat.G4305 vs. NCBI nr
Match: KAA0062061.1 (hypothetical protein E6C27_scaffold89G004030 [Cucumis melo var. makuwa])

HSP 1 Score: 639 bits (1647), Expect = 1.37e-221
Identity = 396/797 (49.69%), Postives = 418/797 (52.45%), Query Frame = 0


Query: 1   MADESSRKDPAWKYGQLQNDQNINTFVCGFCSKVTKGGVYRMKQHLVGGYRNVTACTKCP 60
           MADESS+KDPAWKYG+LQN+Q+INTFVCGFCSKVTKGGVYR+KQHLVGGYRN  AC KCP
Sbjct: 1   MADESSKKDPAWKYGRLQNEQDINTFVCGFCSKVTKGGVYRLKQHLVGGYRNAIACKKCP 60

Query: 61  DHVKEEIKEYMSKKKDIKEQRNLIVDIDVEDYDIEDEDEGSVSVNNKATPRGPSLKKPRQ 120
           DHVKEEI++YMSKKK+IKEQRNLIVDIDV+DY +EDEDEGS+SVNN+AT  G SLKKPRQ
Sbjct: 61  DHVKEEIRDYMSKKKEIKEQRNLIVDIDVQDYGMEDEDEGSISVNNRATSSGSSLKKPRQ 120

Query: 121 KGPMDAFFTPNPETVVQNRK-DKGKQTSLNATYKKEMREHTIQRIARWFYDAGVPLNA-- 180
           KGPMDAFFTPNPE+VVQNRK DKGKQTSLNA YKKEMREHTIQRIARWFYDAGVPLNA  
Sbjct: 121 KGPMDAFFTPNPESVVQNRKNDKGKQTSLNAAYKKEMREHTIQRIARWFYDAGVPLNACT 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 YDSFAPMIESIGQFGPGLKPPTYHELRVPCLKKELEATNELMSSHKAEWAKVGCTVMADG 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 WTDRRNRTLINFLVNSPKGTMFIESIDASSYVKDGKKMFELLDNFVERIGEANVVQVVTD 300

Query: 301 ------------------------------------------------------------ 360
                                                                       
Sbjct: 301 SASANVMAGRLLEAKRPQLIWSPCAAHCLDLMLEDIYKISNIRKALKRGMEISNFIYVRP 360

Query: 361 ------------------------------------------------------------ 420
                                                                       
Sbjct: 361 GLLNMMRRFTKQKELVRPAKTRFATACITLSSIHHQKNNLRKMFTSDEWKDSKWSKEQQG 420

Query: 421 ------------------------------------------------------------ 465
                                                                       
Sbjct: 421 RRVVQTILLASFWTTIVFTLKVSGPLVRVLRLVDGEKKPPMGYIYEAMDRAKEAIAKSFN 480

[Close]

BLAST of Cucsat.G4305 vs. NCBI nr
Match: KAA0041802.1 (hypothetical protein E6C27_scaffold67G001750 [Cucumis melo var. makuwa] >KAA0048513.1 hypothetical protein E6C27_scaffold61G001320 [Cucumis melo var. makuwa])

HSP 1 Score: 638 bits (1646), Expect = 1.94e-221
Identity = 395/797 (49.56%), Postives = 418/797 (52.45%), Query Frame = 0


Query: 1   MADESSRKDPAWKYGQLQNDQNINTFVCGFCSKVTKGGVYRMKQHLVGGYRNVTACTKCP 60
           MADESS+KDPAWKYG+LQN+Q+INTFVCGFCSKVTKGGVYR+KQHLVGGYRN  AC KCP
Sbjct: 1   MADESSKKDPAWKYGRLQNEQDINTFVCGFCSKVTKGGVYRLKQHLVGGYRNAIACKKCP 60

Query: 61  DHVKEEIKEYMSKKKDIKEQRNLIVDIDVEDYDIEDEDEGSVSVNNKATPRGPSLKKPRQ 120
           DHVKEEI++YMSKKK+IKEQRNLIVDIDV+DY +EDEDEGS+SVNN+AT  G SLKKPRQ
Sbjct: 61  DHVKEEIRDYMSKKKEIKEQRNLIVDIDVQDYGMEDEDEGSISVNNRATSSGSSLKKPRQ 120

Query: 121 KGPMDAFFTPNPETVVQNRK-DKGKQTSLNATYKKEMREHTIQRIARWFYDAGVPLNA-- 180
           KGPMDAFFTPNPE+VVQNRK DKGKQTSLNA YKKEMREHTIQRIARWFYDAGVPLNA  
Sbjct: 121 KGPMDAFFTPNPESVVQNRKNDKGKQTSLNAAYKKEMREHTIQRIARWFYDAGVPLNACT 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 YDSFAPMIESIGQFGPGLKPPTYHELRVPCLKKELEATNELMSSHKAEWAKVGCTVMADG 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 WTDRRNRTLINFLVNSPKGTMFIESIDASSYVKDGKKMFELLDNFVERIGEANVVQVVTD 300

Query: 301 ------------------------------------------------------------ 360
                                                                       
Sbjct: 301 SASANVMAGRLLEAKRPQLIWSPCAAHCLDLMLEDIYKISNIRKALKRGMEISNFIYVRP 360

Query: 361 ------------------------------------------------------------ 420
                                                                       
Sbjct: 361 GLLNMMRRFTNQKELVRPAKTRFATACITLSSIHHQKNNLRKMFTSDEWKDSKWSKEQQG 420

Query: 421 ------------------------------------------------------------ 465
                                                                       
Sbjct: 421 RRVVQTILLASFWTTIVFALKVSGPLVRVLRLVDGEKKPPMGYIYEAMDRAKEAIAKSFN 480

[Close]

BLAST of Cucsat.G4305 vs. ExPASy TrEMBL
Match: A0A5A7TWK3 (BED-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G001550 PE=4 SV=1)

HSP 1 Score: 667 bits (1721), Expect = 2.49e-234
Identity = 394/714 (55.18%), Postives = 416/714 (58.26%), Query Frame = 0


Query: 1   MADESSRKDPAWKYGQLQNDQNINTFVCGFCSKVTKGGVYRMKQHLVGGYRNVTACTKCP 60
           MADESS+KDPAWKYG+LQNDQ+INTFVCGFCSKVTKGGVYR+KQHLVGGYRN  AC KCP
Sbjct: 1   MADESSKKDPAWKYGRLQNDQDINTFVCGFCSKVTKGGVYRLKQHLVGGYRNAIACKKCP 60

Query: 61  DHVKEEIKEYMSKKKDIKEQRNLIVDIDVEDYDIEDEDEGSVSVNNKATPRGPSLKKPRQ 120
           DHVKEEI++YMSKKK+IKEQRNLIVDIDV+DY +EDEDEGS+SVNN+AT  G SLKKPRQ
Sbjct: 61  DHVKEEIRDYMSKKKEIKEQRNLIVDIDVQDYGMEDEDEGSISVNNRATSSGSSLKKPRQ 120

Query: 121 KGPMDAFFTPNPETVVQNRK-DKGKQTSLNATYKKEMREHTIQRIARWFYDAGVPLNA-- 180
           KGPMDAFFTPNPE+VVQNRK DKGKQTSLNA YKKEMREHTIQRIARWFYDAGVPLNA  
Sbjct: 121 KGPMDAFFTPNPESVVQNRKNDKGKQTSLNAAYKKEMREHTIQRIARWFYDAGVPLNACT 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 YDSFAPMIESIGQFGPGLKPPTYHELRVPCLKKELEATNELMSSHKAEWAKVGCTVMADG 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 WTDRRNRTLINFLVNSPKGTMFIESIDASSYVKDGKKMFELLDNFVERIGEANVVQVVTD 300

Query: 301 ------------------------------------------------------------ 360
                                                                       
Sbjct: 301 SASANVMAGRLLEAKRPQLIWSPCAAHCLDLMLEDIYKISNIRKALKRGMEISNFIYVLS 360

Query: 361 ------------------------------------------------------------ 420
                                                                       
Sbjct: 361 GPLVRVLRLVDGEKKPPMGYIYEAMDRAKEAIAKSFNNNKEKYKDIFTIIDRRWELQLHR 420

Query: 421 ----AGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKRAEAL 465
               AGYYLNPSFYYSNP+IQEDDEIVNGLYSCITKMVASL++QDKILAELSKYKRAEAL
Sbjct: 421 PLHAAGYYLNPSFYYSNPSIQEDDEIVNGLYSCITKMVASLDIQDKILAELSKYKRAEAL 480

[Close]

BLAST of Cucsat.G4305 vs. ExPASy TrEMBL
Match: A0A5A7V8P5 (BED-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G004030 PE=4 SV=1)

HSP 1 Score: 639 bits (1647), Expect = 6.63e-222
Identity = 396/797 (49.69%), Postives = 418/797 (52.45%), Query Frame = 0


Query: 1   MADESSRKDPAWKYGQLQNDQNINTFVCGFCSKVTKGGVYRMKQHLVGGYRNVTACTKCP 60
           MADESS+KDPAWKYG+LQN+Q+INTFVCGFCSKVTKGGVYR+KQHLVGGYRN  AC KCP
Sbjct: 1   MADESSKKDPAWKYGRLQNEQDINTFVCGFCSKVTKGGVYRLKQHLVGGYRNAIACKKCP 60

Query: 61  DHVKEEIKEYMSKKKDIKEQRNLIVDIDVEDYDIEDEDEGSVSVNNKATPRGPSLKKPRQ 120
           DHVKEEI++YMSKKK+IKEQRNLIVDIDV+DY +EDEDEGS+SVNN+AT  G SLKKPRQ
Sbjct: 61  DHVKEEIRDYMSKKKEIKEQRNLIVDIDVQDYGMEDEDEGSISVNNRATSSGSSLKKPRQ 120

Query: 121 KGPMDAFFTPNPETVVQNRK-DKGKQTSLNATYKKEMREHTIQRIARWFYDAGVPLNA-- 180
           KGPMDAFFTPNPE+VVQNRK DKGKQTSLNA YKKEMREHTIQRIARWFYDAGVPLNA  
Sbjct: 121 KGPMDAFFTPNPESVVQNRKNDKGKQTSLNAAYKKEMREHTIQRIARWFYDAGVPLNACT 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 YDSFAPMIESIGQFGPGLKPPTYHELRVPCLKKELEATNELMSSHKAEWAKVGCTVMADG 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 WTDRRNRTLINFLVNSPKGTMFIESIDASSYVKDGKKMFELLDNFVERIGEANVVQVVTD 300

Query: 301 ------------------------------------------------------------ 360
                                                                       
Sbjct: 301 SASANVMAGRLLEAKRPQLIWSPCAAHCLDLMLEDIYKISNIRKALKRGMEISNFIYVRP 360

Query: 361 ------------------------------------------------------------ 420
                                                                       
Sbjct: 361 GLLNMMRRFTKQKELVRPAKTRFATACITLSSIHHQKNNLRKMFTSDEWKDSKWSKEQQG 420

Query: 421 ------------------------------------------------------------ 465
                                                                       
Sbjct: 421 RRVVQTILLASFWTTIVFTLKVSGPLVRVLRLVDGEKKPPMGYIYEAMDRAKEAIAKSFN 480

[Close]

BLAST of Cucsat.G4305 vs. ExPASy TrEMBL
Match: A0A5A7TY62 (BED-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold61G001320 PE=4 SV=1)

HSP 1 Score: 638 bits (1646), Expect = 9.39e-222
Identity = 395/797 (49.56%), Postives = 418/797 (52.45%), Query Frame = 0


Query: 1   MADESSRKDPAWKYGQLQNDQNINTFVCGFCSKVTKGGVYRMKQHLVGGYRNVTACTKCP 60
           MADESS+KDPAWKYG+LQN+Q+INTFVCGFCSKVTKGGVYR+KQHLVGGYRN  AC KCP
Sbjct: 1   MADESSKKDPAWKYGRLQNEQDINTFVCGFCSKVTKGGVYRLKQHLVGGYRNAIACKKCP 60

Query: 61  DHVKEEIKEYMSKKKDIKEQRNLIVDIDVEDYDIEDEDEGSVSVNNKATPRGPSLKKPRQ 120
           DHVKEEI++YMSKKK+IKEQRNLIVDIDV+DY +EDEDEGS+SVNN+AT  G SLKKPRQ
Sbjct: 61  DHVKEEIRDYMSKKKEIKEQRNLIVDIDVQDYGMEDEDEGSISVNNRATSSGSSLKKPRQ 120

Query: 121 KGPMDAFFTPNPETVVQNRK-DKGKQTSLNATYKKEMREHTIQRIARWFYDAGVPLNA-- 180
           KGPMDAFFTPNPE+VVQNRK DKGKQTSLNA YKKEMREHTIQRIARWFYDAGVPLNA  
Sbjct: 121 KGPMDAFFTPNPESVVQNRKNDKGKQTSLNAAYKKEMREHTIQRIARWFYDAGVPLNACT 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 YDSFAPMIESIGQFGPGLKPPTYHELRVPCLKKELEATNELMSSHKAEWAKVGCTVMADG 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 WTDRRNRTLINFLVNSPKGTMFIESIDASSYVKDGKKMFELLDNFVERIGEANVVQVVTD 300

Query: 301 ------------------------------------------------------------ 360
                                                                       
Sbjct: 301 SASANVMAGRLLEAKRPQLIWSPCAAHCLDLMLEDIYKISNIRKALKRGMEISNFIYVRP 360

Query: 361 ------------------------------------------------------------ 420
                                                                       
Sbjct: 361 GLLNMMRRFTNQKELVRPAKTRFATACITLSSIHHQKNNLRKMFTSDEWKDSKWSKEQQG 420

Query: 421 ------------------------------------------------------------ 465
                                                                       
Sbjct: 421 RRVVQTILLASFWTTIVFALKVSGPLVRVLRLVDGEKKPPMGYIYEAMDRAKEAIAKSFN 480

[Close]

BLAST of Cucsat.G4305 vs. ExPASy TrEMBL
Match: A0A5A7VJR4 (BED-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold238G00160 PE=4 SV=1)

HSP 1 Score: 635 bits (1637), Expect = 2.16e-220
Identity = 393/797 (49.31%), Postives = 417/797 (52.32%), Query Frame = 0


Query: 1   MADESSRKDPAWKYGQLQNDQNINTFVCGFCSKVTKGGVYRMKQHLVGGYRNVTACTKCP 60
           MADESS+KDPAWKYG+LQN+Q+INTFVCGFCSKVTKGGVYR+KQHLVGGYRN  AC KCP
Sbjct: 1   MADESSKKDPAWKYGRLQNEQDINTFVCGFCSKVTKGGVYRLKQHLVGGYRNAIACKKCP 60

Query: 61  DHVKEEIKEYMSKKKDIKEQRNLIVDIDVEDYDIEDEDEGSVSVNNKATPRGPSLKKPRQ 120
           DHVKEEI++YMSKKK+IKEQRNLIVDIDV+DY +EDEDEGS++VNN+AT  G SLKKPRQ
Sbjct: 61  DHVKEEIRDYMSKKKEIKEQRNLIVDIDVQDYGMEDEDEGSINVNNRATSSGSSLKKPRQ 120

Query: 121 KGPMDAFFTPNPETVVQNRK-DKGKQTSLNATYKKEMREHTIQRIARWFYDAGVPLNA-- 180
           KGPMDAFFTPNPE+VVQNRK DKGKQTSLNA YKKEMREHTIQRIARWFYDAGVPLNA  
Sbjct: 121 KGPMDAFFTPNPESVVQNRKNDKGKQTSLNAAYKKEMREHTIQRIARWFYDAGVPLNACT 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 YDSFAPMIESIGQFGPGLKPPTYHELRVPCLKKELEATNELMSSHKAEWAMVGCTVMADG 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 WTDRRNRTLINFLVNSPKGTMFIESIDASSYVKDGKKMFELLDNFVERIGEANVVQVVTD 300

Query: 301 ------------------------------------------------------------ 360
                                                                       
Sbjct: 301 SASANVMAGRLLEAKRPQLIWSPCAAHCLDLMLEDIYKISNIRKALKRGMEISNFIYVRP 360

Query: 361 ------------------------------------------------------------ 420
                                                                       
Sbjct: 361 GLLNMMRRFTNQKELVRPAKTRFATACITLSSIHHQKNNLRKMFTSDEWKDSKWSKEQQG 420

Query: 421 ------------------------------------------------------------ 465
                                                                       
Sbjct: 421 RRVVQTILLASFWTTIVFALKVSGPLVRVLRLVDGEKKPPMGYIYEAMDRAKEAIAKSFN 480

[Close]

BLAST of Cucsat.G4305 vs. ExPASy TrEMBL
Match: A0A5A7SPX6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold845G00360 PE=4 SV=1)

HSP 1 Score: 606 bits (1563), Expect = 2.90e-209
Identity = 386/797 (48.43%), Postives = 408/797 (51.19%), Query Frame = 0


Query: 1   MADESSRKDPAWKYGQLQNDQNINTFVCGFCSKVTKGGVYRMKQHLVGGYRNVTACTKCP 60
           MADESS+KDPAWKYG+LQNDQ+INTFV GFCSKVTKGGVYR+KQHLVGGYRNVTAC KC 
Sbjct: 1   MADESSKKDPAWKYGRLQNDQDINTFVYGFCSKVTKGGVYRLKQHLVGGYRNVTACRKCS 60

Query: 61  DHVKEEIKEYMSKKKDIKEQRNLIVDIDVEDYDIEDEDEGSVSVNNKATPRGPSLKKPRQ 120
           DHVKEEIK+YMSKKK IKEQRNLIVDIDV+DY IEDEDEGS+SVNN+AT  G SLKKPRQ
Sbjct: 61  DHVKEEIKDYMSKKKQIKEQRNLIVDIDVQDYGIEDEDEGSISVNNRATSSGSSLKKPRQ 120

Query: 121 KGPMDAFFTPNPETVVQNRK-DKGKQTSLNATYKKEMREHTIQRIARWFYDAGVPLNA-- 180
           KGPMDAFFTPNPETVVQNRK DKGKQTSLNA YKKEMREHTIQRIARWFYDA V LNA  
Sbjct: 121 KGPMDAFFTPNPETVVQNRKNDKGKQTSLNAAYKKEMREHTIQRIARWFYDAEVSLNACT 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 YDSFIPMIESIGKFGPGLKPPTYHELRVSCLKKKLEATNELMRSHKAEWAKVGCTVMANG 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 WTNRRNRTLINFLVNSPKGTMFIESIDASSYVKDGKKMFELLDNFVERIGEANVVQVVTD 300

Query: 301 ------------------------------------------------------------ 360
                                                                       
Sbjct: 301 SASTNVMAGRLIEAKRPQLIWSPCAAHCIDLMLEDIYKISNIRKALKRGMEISNFIYVRP 360

Query: 361 ------------------------------------------------------------ 420
                                                                       
Sbjct: 361 RLLIMMGRFTNQKELVRPAKTRLATACITLSSIHHQKNNLRKMFTSDEWKNSKWSKEQQG 420

Query: 421 ------------------------------------------------------------ 465
                                                                       
Sbjct: 421 RRVVQIILLASFWTTIVFALKVSGPLVRVLRLVDGEKKPPMGYIYEAMDRAEEAIAKSFN 480

[Close]

BLAST of Cucsat.G4305 vs. TAIR 10
Match: AT5G33406.1 (hAT dimerisation domain-containing protein / transposase-related )

HSP 1 Score: 240.4 bits (612), Expect = 3.0e-63
Identity = 141/349 (40.40%), Postives = 201/349 (57.59%), Query Frame = 0


Query: 132 PETVVQNRKDKGKQTSLNA-TYKKEMREHTIQRI-ARWFYDAGVPLNAAGYYLNPSFYYS 191
           P   +    D+ K+T + + TYK+E  +   + I  RW      PL+AAGYYLNP F+Y 
Sbjct: 96  PMGYIYGAMDQAKETIMKSFTYKEENYKMAFEIIDRRWDIQLHRPLHAAGYYLNPEFHYG 155

Query: 192 NPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKRAEALFGQPLAIRQRDKISPG 251
            P+    +E++ G   C+ ++V  +E QDKI+ EL  +K+A  LFG P+AIR R K+SP 
Sbjct: 156 QPDDIGYEEVLGGFLGCLGRLVPKIETQDKIITELDAFKKATGLFGIPMAIRLRTKMSP- 215

Query: 252 KFQLNDYSTILATSSSINIYIFLFVPIVEWWDNFGQSTPNLQKFAVRILGLTCSASGCER 311
                                       EWW  +G STPNLQ FA+++L LTCSA+GCER
Sbjct: 216 ---------------------------AEWWSAYGSSTPNLQNFAIKVLSLTCSATGCER 275

Query: 312 NWSVFEQLHSKKRNRLAQSRLNDLVFIKYNRALKRRYNLRDIVDPISLKDIDDSNEWLIG 371
           NW VF+ LH+K+RNRL Q RLND++F+KYNRAL+RRY   D  DPI L +ID  NEWL G
Sbjct: 276 NWGVFQLLHTKRRNRLTQCRLNDMIFVKYNRALQRRYKRNDTFDPILLNEIDQCNEWLTG 335

Query: 372 RLDDDSE--EDDELVFNDDSLTWGDVSRAVGAKEPSFYSRASTS-----RPKTIVSCS-- 431
           R++++S   E+D+LVF +D LTW +V  A GA +P + +R++ +     + K I S S  
Sbjct: 336 RMEENSSDTENDDLVFENDDLTWAEVGEAAGANDPYYATRSTAASSRFEKGKGIASDSGG 395

Query: 432 -SSSTTQRKQVN-------LDDFDLEEEDTDGYKSNEGLNEDEDQFSDD 462
             +S   RK  N       +D+ +  E+D  G +  + L + +D   DD
Sbjct: 396 HGNSRASRKTPNSSRPMTLVDEDEEMEDDFLGAEYEDTLLDKDDYEFDD 416

[Close]

BLAST of Cucsat.G4305 vs. TAIR 10
Match: AT4G15020.1 (hAT transposon superfamily )

HSP 1 Score: 127.1 bits (318), Expect = 3.7e-29
Identity = 75/206 (36.41%), Postives = 109/206 (52.91%), Query Frame = 0


Query: 167 WFYDAGVPLNAAGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSK 226
           W     +PL AAG++LNP  +Y N N +   E++  +  CI ++V   ++QDKI+ EL+ 
Sbjct: 528 WEQQQHIPLLAAGFFLNPKLFY-NTNEEIRSELILSVLDCIERLVPDDKIQDKIIKELTS 587

Query: 227 YKRAEALFGQPLAIRQRDKISPGKFQLNDYSTILATSSSINIYIFLFVPIVEWWDNFGQS 286
           YK A  +FG+ LAIR RD + P                             EWW  +G+S
Sbjct: 588 YKTAGGVFGRNLAIRARDTMLP----------------------------AEWWSTYGES 647

Query: 287 TPNLQKFAVRILGLTCSAS-GCERNWSVFEQLHSKKRNRLAQSRLNDLVFIKYNRALKR- 346
             NL +FA+RIL  TCS+S  C RN    E ++  K N + Q RL+DLVF++YN  L++ 
Sbjct: 648 CLNLSRFAIRILSQTCSSSVSCRRNQIPVEHIYQSK-NSIEQKRLSDLVFVQYNMRLRQL 703

Query: 347 -RYNLRDIVDPISLKDIDDSNEWLIG 370
              +  D +DP+S   ID   EW+ G
Sbjct: 708 GPGSGDDTLDPLSHNRIDVLKEWVSG 703

[Close]

BLAST of Cucsat.G4305 vs. TAIR 10
Match: AT4G15020.2 (hAT transposon superfamily )

HSP 1 Score: 127.1 bits (318), Expect = 3.7e-29
Identity = 75/206 (36.41%), Postives = 109/206 (52.91%), Query Frame = 0


Query: 167 WFYDAGVPLNAAGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSK 226
           W     +PL AAG++LNP  +Y N N +   E++  +  CI ++V   ++QDKI+ EL+ 
Sbjct: 528 WEQQQHIPLLAAGFFLNPKLFY-NTNEEIRSELILSVLDCIERLVPDDKIQDKIIKELTS 587

Query: 227 YKRAEALFGQPLAIRQRDKISPGKFQLNDYSTILATSSSINIYIFLFVPIVEWWDNFGQS 286
           YK A  +FG+ LAIR RD + P                             EWW  +G+S
Sbjct: 588 YKTAGGVFGRNLAIRARDTMLP----------------------------AEWWSTYGES 647

Query: 287 TPNLQKFAVRILGLTCSAS-GCERNWSVFEQLHSKKRNRLAQSRLNDLVFIKYNRALKR- 346
             NL +FA+RIL  TCS+S  C RN    E ++  K N + Q RL+DLVF++YN  L++ 
Sbjct: 648 CLNLSRFAIRILSQTCSSSVSCRRNQIPVEHIYQSK-NSIEQKRLSDLVFVQYNMRLRQL 703

Query: 347 -RYNLRDIVDPISLKDIDDSNEWLIG 370
              +  D +DP+S   ID   EW+ G
Sbjct: 708 GPGSGDDTLDPLSHNRIDVLKEWVSG 703

[Close]

BLAST of Cucsat.G4305 vs. TAIR 10
Match: AT3G22220.1 (hAT transposon superfamily )

HSP 1 Score: 123.2 bits (308), Expect = 5.3e-28
Identity = 76/210 (36.19%), Postives = 112/210 (53.33%), Query Frame = 0


Query: 164 IARWFYDAGVPLNAAGYYLNPSFYYSNPNIQED--DEIVNGLYSCITKMVASLEVQDKIL 223
           I RW+     PL AAG+YLNP F+YS   I E+   EI   +  CI K+V  + +QD ++
Sbjct: 521 IDRWWLQQ--PLYAAGFYLNPKFFYS---IDEEMRSEIHLAVVDCIEKLVPDVNIQDIVI 580

Query: 224 AELSKYKRAEALFGQPLAIRQRDKISPGKFQLNDYSTILATSSSINIYIFLFVPIVEWWD 283
            +++ YK A  +FG+ LAIR RD + P                             EWW 
Sbjct: 581 KDINSYKNAVGIFGRNLAIRARDTMLP----------------------------AEWWS 640

Query: 284 NFGQSTPNLQKFAVRILGLTCSAS-GCERNWSVFEQLHSKKRNRLAQSRLNDLVFIKYNR 343
            +G+S  NL +FA+RIL  TCS+S G  RN +   Q++  K N + + RLNDLVF++YN 
Sbjct: 641 TYGESCLNLSRFAIRILSQTCSSSIGSVRNLTSISQIYESK-NSIERQRLNDLVFVQYNM 696

Query: 344 ALKR---RYNLRDIVDPISLKDIDDSNEWL 368
            L+R     +  D VDP+S  +++   +W+
Sbjct: 701 RLRRIGSESSGDDTVDPLSHSNMEVLEDWV 696

[Close]

BLAST of Cucsat.G4305 vs. TAIR 10
Match: AT3G22220.2 (hAT transposon superfamily )

HSP 1 Score: 123.2 bits (308), Expect = 5.3e-28
Identity = 76/210 (36.19%), Postives = 112/210 (53.33%), Query Frame = 0


Query: 164 IARWFYDAGVPLNAAGYYLNPSFYYSNPNIQED--DEIVNGLYSCITKMVASLEVQDKIL 223
           I RW+     PL AAG+YLNP F+YS   I E+   EI   +  CI K+V  + +QD ++
Sbjct: 521 IDRWWLQQ--PLYAAGFYLNPKFFYS---IDEEMRSEIHLAVVDCIEKLVPDVNIQDIVI 580

Query: 224 AELSKYKRAEALFGQPLAIRQRDKISPGKFQLNDYSTILATSSSINIYIFLFVPIVEWWD 283
            +++ YK A  +FG+ LAIR RD + P                             EWW 
Sbjct: 581 KDINSYKNAVGIFGRNLAIRARDTMLP----------------------------AEWWS 640

Query: 284 NFGQSTPNLQKFAVRILGLTCSAS-GCERNWSVFEQLHSKKRNRLAQSRLNDLVFIKYNR 343
            +G+S  NL +FA+RIL  TCS+S G  RN +   Q++  K N + + RLNDLVF++YN 
Sbjct: 641 TYGESCLNLSRFAIRILSQTCSSSIGSVRNLTSISQIYESK-NSIERQRLNDLVFVQYNM 696

Query: 344 ALKR---RYNLRDIVDPISLKDIDDSNEWL 368
            L+R     +  D VDP+S  +++   +W+
Sbjct: 701 RLRRIGSESSGDDTVDPLSHSNMEVLEDWV 696

The following BLAST results are available for this feature:

BLAST of Cucsat.G4305 vs.


Match Name	E-value	Identity	Description

BLAST of Cucsat.G4305 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031745317.1	1.19e-274	55.36	uncharacterized protein LOC116405444 [Cucumis sativus]	[more]
XP_031741477.1	1.91e-253	54.79	uncharacterized protein LOC105435633 [Cucumis sativus]	[more]
KAA0047882.1	5.15e-234	55.18	hypothetical protein E6C27_scaffold133G001550 [Cucumis melo var. makuwa]	[more]
KAA0062061.1	1.37e-221	49.69	hypothetical protein E6C27_scaffold89G004030 [Cucumis melo var. makuwa]	[more]
KAA0041802.1	1.94e-221	49.56	hypothetical protein E6C27_scaffold67G001750 [Cucumis melo var. makuwa] >KAA0048...	[more]

BLAST of Cucsat.G4305 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TWK3	2.49e-234	55.18	BED-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]
A0A5A7V8P5	6.63e-222	49.69	BED-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]
A0A5A7TY62	9.39e-222	49.56	BED-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]
A0A5A7VJR4	2.16e-220	49.31	BED-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]
A0A5A7SPX6	2.90e-209	48.43	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of Cucsat.G4305 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G33406.1	3.0e-63	40.40	hAT dimerisation domain-containing protein / transposase-related	[more]
AT4G15020.1	3.7e-29	36.41	hAT transposon superfamily	[more]
AT4G15020.2	3.7e-29	36.41	hAT transposon superfamily	[more]
AT3G22220.1	5.3e-28	36.19	hAT transposon superfamily	[more]
AT3G22220.2	5.3e-28	36.19	hAT transposon superfamily	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 185..212 e-value: 1.8E-7 score: 40.8
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 186..211 e-value: 5.7E-10 score: 38.9
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 185..213 score: 14.577143
None	No IPR available	GENE3D	4.10.1000.10		coord: 183..215 e-value: 1.6E-6 score: 29.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..19
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..86
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 234..254
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..103
None	No IPR available	PANTHER	PTHR12930:SF9	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 1-LIKE	coord: 1..290
None	No IPR available	CDD	cd16539	RING-HC_RNF113A_B	coord: 261..289 e-value: 2.39384E-17 score: 72.2631
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 262..289
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 216..294 e-value: 7.6E-11 score: 43.7
IPR027370	RING-type zinc-finger, LisH dimerisation motif	PFAM	PF13445	zf-RING_UBOX	coord: 263..287 e-value: 1.0E-5 score: 25.4
IPR039971	Pre-mRNA-splicing factor CWC24-like	PANTHER	PTHR12930	ZINC FINGER PROTEIN 183	coord: 1..290
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 263..286 score: 8.535474
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 184..216

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G4305.T1	Cucsat.G4305.T1	mRNA
Cucsat.G4305.T2	Cucsat.G4305.T2	mRNA
Cucsat.G4305.T3	Cucsat.G4305.T3	mRNA
Cucsat.G4305.T4	Cucsat.G4305.T4	mRNA
Cucsat.G4305.T12	Cucsat.G4305.T12	mRNA
Cucsat.G4305.T9	Cucsat.G4305.T9	mRNA
Cucsat.G4305.T6	Cucsat.G4305.T6	mRNA
Cucsat.G4305.T5	Cucsat.G4305.T5	mRNA
Cucsat.G4305.T7	Cucsat.G4305.T7	mRNA
Cucsat.G4305.T8	Cucsat.G4305.T8	mRNA
Cucsat.G4305.T10	Cucsat.G4305.T10	mRNA
Cucsat.G4305.T11	Cucsat.G4305.T11	mRNA
Cucsat.G4305.T13	Cucsat.G4305.T13	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034247	snoRNA splicing
cellular_component	GO:0000932	P-body
cellular_component	GO:0005684	U2-type spliceosomal complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0046983	protein dimerization activity