Cucsat.G4305.T6 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G4305.T6
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	BED-type domain-containing protein
Location	ctg1170: 157838 .. 164523 (+)
RNA-Seq Expression	Cucsat.G4305.T6
Synteny	Cucsat.G4305.T6

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TATTAGTCCGCTTTTAATCTTATTTTTGACAATTTCCTTGAAAACTTCTACCATCTCGAAGATTTTTAGAATTTCAACTACACTTACCGATGAACACTAAATAGACATCGATAGATGTACTTAACACCTATATTTCCCTTGAATTTTCGGGGTGAGAATATAGTCCGTAGATATAGACTCTTCGGAAATTTTAACTAATCTCCTATCCGTCGAGCCACGGTCTTACACAATCGGGATCGAAACAAAAGGAATGAAAAGAAACACAAAACCCTAATTTCGCCTTTCAGTCAGCGACGTCACTTTTCTCTACCAACATATCCCGGCGGACACCCAGTTCACAAGTAGCTCCGGCGGCGGCGCGGTTCATAGATCCTCGAACGACCACGGGGAGTCCCAGAGCGGCACGATTTCTTGATCTGCATTGACCAGCTATATCTGTACGCCGCGATTCCGAGCCACAACCCTGCACCGACGCCCATTTCGATCATTCAACTTGTTCTTCTTCTTCTTATTCTTCTTCTTTTTTTAAATTCCATTGTAGCATCTATTTATTAATCTAGCTGCTCTTACTCTCGTATACAATGACAGATACAGGCGATACTCAGCCGTCTGAACAAGGTATTAGGGGTTTTTGTTTCGTTCCATTCCTTTTATATATGCATATAGATTTACCTATTTTCATCATGGGTTCTTTGTTTTGTGTCTCCAATTTTTTTCATTGTTGTCGCTCTCTCTAGATACGTTTTTAATCCATTTTTCTTCAGTCTGTAGCTTCTTCAGAAAACCCACCAAAAACAAAAACATCAGGAAGCGGACGGTTGATGAAGACGAAGAGGAGGACTCTAAAGCTGAGACTTCGTTTCTGCTAAATCAGAAGAAAGCCCCTAAGACTGAAAGCAAGCTTTATTTTTCTTCTGGGCCTTCTAAAAATTCATCGTCTAATGAGTCCAATGTGGAACCTAATAAACCAATTTTCCAATTTGAGTCTTCAAAGGAAATTCAAGTTCACCATGATAGCAGAGCAACTGCAACTCTAGAAACAGAGACTGATTTCTCAAGAGATGCACGAGCCATCCGTGAGAGAGTTTTGAAGCAAGCTGAGGAGGCTTTGAAGGGGAAAGGCAAGAGCTCTGGTGGTGAGAAGTTGTATAAAGGGGTCAATGCTTATGTTGATTACAAGGCTGGCTTCAGAAGGGAACATACAATTTCTAGTGAAAAAGCTGGTGGAGCACATGGGCCGCTTAGAGCTTCTGCTCACATAAGAGCATCGGCAAGATTTGATTATCAGCCTGATATTTGCAAGGATTACAAGGAGACTGGTTACTGTGGTTATGGAGATGCGTGCAAGTTTATGCATGACCGAGGGGATTACAAGTCTGGGTGGCAGTTGGAGAAGGAATGGGAGGAAGTAGAGAAAGCAAGAAAGAGAAAATTAGCTATGAAATCTGATGATGGGGATGAGGATACTTCAGAACAAAGTGATGAAGATGAAGAAGATGCGTTGCCCTTTGCTTGTTTTATTTGTCGCGAGCCTTTTGTGGATCCTGTTGTGACAAAGTGCAAGCATTACTTCTGTGAGCATTGTGCACTAAAGGTAGTTGCTCTCTCTTTGTCTTTACTTGTGTCTTAATTATATTGTGATCATGAAGTCATTTCTTCTCTAGGAGATCAAAACGTGCTTCAGAGTTCCTTATATGCTGATGGTTTACCTTCCTCACTAATATATTTATATATACTTGAAATTGAGAAAAAATTTTTTGTTGTGAAAATGAAGAAAAAAAATAATTGTCTGCTTACATACTTTCTCTGCCGTATTTGTTCATTTACATTGACTTACCATAGCATTTTTTCTAAAGTAAACCTATTTATGATGTTTTTTATATTTAGAAATACAATGTTTTTTAAAAAACGAAGGATAATTTTAAAGTAAGAGATAGATTGTTTATTAGAATTATTTTGAAAAATAATTCACCTATTCGACCAGGTCTTACCTGAACAGAATCTATTCTATTTGTTTTGCAACTGTATCCTTGAGTTCGTAAAAATGTCCATCCATTCATGTTGTTGTTCTTGCTCGTTACTGTTGCAGTGACCTATTATTATATTTTCTATAAAGGATTTTCCAACTATGTTAAGTTTTTTCTATAGAACATTATATGTTCCAATTATATTTTGTAATTTAGGGGCCGTTTTGGGGCACCAAAAAGAAGTTGGTAGAGTGGGTTATTATGTTCCAACCCATGTTTGGGGCACCAAATATAATAGTGGTGTATACAAGTATTTATAGCTGTTAAAAGGTAGAAAATAGAACACACAAGGTTTACGTGGAAAACCCTAGAATAGGGAGAAAAAACCACAATTGGGACTTGGCAGTCTTTTATTATTTTCAAAAACAAGGGAAGTTACAAAAGAAGAAAACTTTATAGGCTTTAGCTAGCCCTAATACAAAAAAATAAATAAACTTATGGTAAAGTGAAATAATAAAATACCCTCAGGGCTATAAACTATCTACAAAGCCCATTATTTCCAACATTCTCCCTCAAGTTGGGGGTAGATGTCAATCAAACTCAACATGCTAACACGTGAGTCAAAACTTGACCTGAGTAACCCTTTGGTGAGAACGTCAGCAACTAGTTGACAAGATGAATTCTACATAATACAGATACTTCCACTGTTCCGTTTCTCTTTTATAAGGTGTCCGTCAATCACCACATATTTCGTTCTATCATGTTGTACAAGATTATTGGCTATGCTCATGGTCGCTTTATCATCACAATAGAGATTCGTAGGTAAAACACAGTCTTGGTGAAGATCAGACAAGATTTCTTGAACCAGACTCTTAGCTTTGTATTAAGCTTCAACACTACTTCTAGCAACAACATTTTGCTTCTTACTTCTCCAATTAACTAAGTTACCTCACTCAAAAGTACGATATCCAGAGGTAGATTTTCTGTCAATAATTGATCCTATCCAATCAGAGTCGGTATAAGCATCAATGAATTTACCATTTACTTGGAGAACTTCTCAAATATTTCAGAATCCGATTCATAGCTTCCATATGTTCTTCGTAGGGTGTGTGCATAAATTGACTAACAATACTGACAACATAGGAAATATCTGGTATAGTGTGACATAAGTAATAGAACTTTCACAGGATTTTGTTCTATCATTGTCTAATTCTGCATTGAACTCAATAGGGGTGTCAGCAGATCTACATCCAGTCATACTTGTTTCTTTTAATAGGTCAAGGGTGTATTTCCGTTGTGAGATAGAGATCCCTTCCCTTGATCTTGCCAGCTTCATTTCTAGGAAATATTTTATATTCCTTAGACCATTGATTTCAAATATGTTAGCCATTTTCTTTTTCAGACTGGTGATCTCAGCCGTATCATCTCCTGACAAGACAATATCGTCTACATCGAAAAAGAAGTCTTACCCAAACTCCAATCTCTTCATTGAGAAAGAAGAATGTGCCAGATTTTGACTCTCCTTTTAGTGTGAGGAGTGAGGAAGTCGAACATATGCCAAAGACAGTAGAGAAGGATGACTAGTCGTTGAAGGATCCTTTAGAATATGATCTCAATTTCCTACTTCAAACAGAGGAAGATTTAATTACTGAGACGTAGGCCTCTTTATTACTCTCACAAGCTAAGCACTGAAATTTCAGATCTCTTGAAGTTCATTGTTGAGAAATGTGGAAGTATTTTGGTTTGAGTACAAAATTTAGACTTTATCTTGTTTTTTCATTCATTTATTTTTGAAGTCTTTTAGTGGACCATGAAAGGTTCGACAGATGCTTCTATTATTTTGGCCCTCAAAAGTTCTTGTGAAATATTTCGGTCCTAGTTAGTCACTCAAGATTTAAGGACTATTAGGAGGCATATTTTTTAAACAATACACAACTTGAAGCTGGGTGGTTGTTTGCTCTCCCTTGGTGTTTTCTTCTCAACGATTTTGAAGTTTTTAGTGTGCATTCTTTAGCTATTTTGGGATTCTTGTTGAAAGAATTTTAAGTTTGCTTTGTTCTTAGTAGTTTTCTATTGTTTTGCCCAAGATTGGGCTTTTCATTTGGAGGACGTTTTCTGTCAATGGTTGGTCTACTATGTAACTTTCAACAGTGTTATTTCGTATGCTAGGGTTTCTTGCAATGTTCACACACCGTGATCTGTTTCCCTTTATGCTTGTCACTGTTAGAACCAGATAATTTCGCTCTAAAAGCAGCAGAATCTGTAGCATATACAACATTGACTGTTTCCCTTGAGGCGTACCTTAGAACACAATTCCATAACATAAGTTATAGGCCTTTGTCTCAATATACAGCTTCGTTCTACATCTTGGAGATCAAACCAACTAGGAAATCATAAACACAATCGACATCCTTAATCTTGGAATACTGGACACCTCCACATGGACTATCCCAGATAATTTCACGACATAGATCCATCTCCGGCCAGATTAGGGACAATTTGTTTTAAGTATGAAGTGACATCCATCGTCCCCTGTTTGCACTCATGAGCTTGTTTACATTGAATGTACAGACGAGTGCATTCTATCATTTAGAAAATAATTTTCGAATTGTATCCCAGATATCTTAAGCAGTAGCAACTTACAACAATAGTTTTCCTATCTAAGGTTTCATACTATTAATCGACAGTGGGCGAAGTAATTAGTCTTCTCTTTTCCAAACGCGCTTCTGAGTATCATCTGGTCTAGGTCCTGGCAGTGTTTTAAAAAGCGCCCTAAGGCGCGCGCCTAGGCGCGCCTAGGCTCAAGGCGCCCACTTGGGGCTTATTTGTGAGGAGGCGCAGCGAATTATAAAAAGCCCATATTAGGCGCGCGCCTCCCTTGAGGCGCGCCTAGGCGCAAGTCGAATTAGGCGTGGGCTTTTTTTTATAAGTTATGGGCTGGGCTTTAATTATAAAAAACTATTATTATTTAGGTTTTTTAAACCTATTACGTAAACGTGAAGAAAGAACCCTTCTCCTTTCGCGCGTGAAGTTTCTTCAACACGACTCTTCATCTACTTCTTCAGTTCTTCGTCTTCCGTTCTGCTTCTACTTCAGTTCTTCGTCTTCGTCTTCCGTTTGCTTCCTTTTCCACCCTTCCATTCCGGCCACCCTTCTTCTTCACACAAAACGAGTGCTGCGGCTGCCATTACTCTGTTTTTTGGTGCACACGACTCTTCATCTACTTCTTCAGTTCTTCGTCTTCCGTTCTGCTTCTACTTCAGTTCTTCGTCTTCGTCTTCCGTTTGCTTCCTTTTCCACCCTTCCGTTCCGGCCACCCTTCTTCTTCACACAAAACGAGTGCTGCGGCTGCCATTACTCTGTTTTTTGGTGCAAAAACAGAGGAAAAGAGAAGACAATAATATTCTGTGCTACAGTGCTGCTAGTGCTTCAGTTTTCGCCTCCTCCATCTCAGCTTTATCACGGGTTAGTATCTCAATCGTTCAGTTAACATCTGCATTGCTTTCTCCTTCTTCTGTAACTCTTTGACAAGAACATCAAACTCCATTGTTTTCTGTTTTCATAGCATGGTATACCCATTGAGTTAGAAAAAACTCTCTAAAGTCTACATCTTCTTCTTCTTATACTTCTCAACTTCAACTTCCTTCGATAACCCATCAAACTCAACCTTCATCCCATCCATCTCACAACACACTCCCCTCCAATCCTCCATTTATAACAACTTCATCCCATCCATAGATAGCTTCTGTTTTTTTTTTTTTTAATAACAGCTGCTGTTTTAAATAGTTTCTGTTTTTTTTTTTATAACTTAGATCATAGATGGCTGATGAAAGTTCGAGAAAAGATCCGGCATGGAAATATGGTCAATTGCAAAATGACCAAAATATAAATACGTTTGTCTGTGGATTTTGTTCGAAAGTAACAAAAGGAGGGGTATATAGAATGAAACAACACCTCGTTGGTGGTTATAGAAATGTCACCGCCTGTACAAAATGTCCAGATCACGTGAAGGAAGAAATTAAAGAGTACATGTCCAAGAAAAAAGATATTAAAGAACAAAGAAATCTGATTGTGGACATTGATGTAGAAGATTATGATATTGAGGATGAAGATGAAGGGAGTGTTAGTGTAAACAACAAAGCAACACCAAGGGGCCCGAGCTTGAAGAAGCCAAGGCAAAAGGGTCCAATGGATGCATTTTTTACTCCTAACCCAGAAACTGTGGTTCAAAATAGAAAGGACAAAGGAAAACAAACTTCATTGAATGCGACATACAAGAAGGAAATGAGAGAGCACACCATCCAAAGAATTGCTCGATGGTTTTATGATGCAGGAGTGCCTTTGAATGCAGCGGGGTATTATTTAAACCCGTCATTCTATTATTCGAATCCTAACATCCAGGAGGATGATGAAATAGTTAATGGACTCTACTCATGCATAACGAAAATGGTTGCTTCATTGGAAGTACAAGACAAAATACTTGCAGAACTAAGCAAGTATAAGAGGGCTGAAGCATTATTCGGACAACCTTTAGCAATCAGACAAAGGGACAAAATATCTCCAGGTAAATTTCAACTAAACGATTATTCAACGATACTAGCAACAAGCTCTTCTATTAATATATATATTTTTTTGTTTGTGCCTATAGTGGAATGGTGGGATAATTTTGGACAATCAACTCCAAACTTGCAAAAGTTTGCTGTGAGAATTTTAGGTCTT

Coding sequence (CDS)

ATGACAGATACAGGCGATACTCAGCCGTCTGAACAAGTCTGTAGCTTCTTCAGAAAACCCACCAAAAACAAAAACATCAGGAAGCGGACGGTTGATGAAGACGAAGAGGAGGACTCTAAAGCTGAGACTTCGTTTCTGCTAAATCAGAAGAAAGCCCCTAAGACTGAAAGCAAGCTTTATTTTTCTTCTGGGCCTTCTAAAAATTCATCGTCTAATGAGTCCAATGTGGAACCTAATAAACCAATTTTCCAATTTGAGTCTTCAAAGGAAATTCAAGTTCACCATGATAGCAGAGCAACTGCAACTCTAGAAACAGAGACTGATTTCTCAAGAGATGCACGAGCCATCCGTGAGAGAGTTTTGAAGCAAGCTGAGGAGGCTTTGAAGGGGAAAGGCAAGAGCTCTGGTGGTGAGAAGTTGTATAAAGGGGTCAATGCTTATGTTGATTACAAGGCTGGCTTCAGAAGGGAACATACAATTTCTAGTGAAAAAGCTGGTGGAGCACATGGGCCGCTTAGAGCTTCTGCTCACATAAGAGCATCGGCAAGATTTGATTATCAGCCTGATATTTGCAAGGATTACAAGGAGACTGGTTACTGTGGTTATGGAGATGCGTGCAAGTTTATGCATGACCGAGGGGATTACAAGTCTGGGTGGCAGTTGGAGAAGGAATGGGAGGAAGTAGAGAAAGCAAGAAAGAGAAAATTAGCTATGAAATCTGATGATGGGGATGAGGATACTTCAGAACAAAGTGATGAAGATGAAGAAGATGCGTTGCCCTTTGCTTGTTTTATTTGTCGCGAGCCTTTTGTGGATCCTGTTGTGACAAAGTGCAAGCATTACTTCTGTGAGCATTGTGCACTAAAGATCATAGATGGCTGA

Protein sequence

MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLYFSSGPSKNSSSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERVLKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRASARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKSDDGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKIIDG

Homology

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BLAST of Cucsat.G4305.T6 vs. ExPASy Swiss-Prot
Match: Q8GX84 (Zinc finger CCCH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=At1g01350 PE=2 SV=2)

HSP 1 Score: 413.3 bits (1061), Expect = 2.3e-114
Identity = 211/306 (68.95%), Postives = 249/306 (81.37%), Query Frame = 0


Query: 1   MTDTGDTQP----------------SEQVCSFFRKPTKNKNIRKRTVDEDEEE-DSKAET 60
           M+D+G+ +P                S+QVC+FF+KPTK+KNIRKRT+D DEE+ DSK+E+
Sbjct: 1   MSDSGEPKPSQQEEPLPQPAAQETQSQQVCTFFKKPTKSKNIRKRTIDADEEDGDSKSES 60

Query: 61  SFLLNQKKAPKTESKLYFSSGPSKNSSSNESNVEPNKPIFQFESSKEIQVHHDSRATATL 120
           S L N KK  K +SKLYFSSGPSK+S++      P + +F ++SSKEIQV +DS ATATL
Sbjct: 61  SILQNLKKVAKPDSKLYFSSGPSKSSTTTSG--APERSVFHYDSSKEIQVQNDSGATATL 120

Query: 121 ETETDFSRDARAIRERVLKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSE 180
           ETETDF++DARAIRERVLK+A+EALKG  K +  EKLYKG++ Y D+KAGFRRE TISSE
Sbjct: 121 ETETDFNQDARAIRERVLKKADEALKGNKKKASDEKLYKGIHGYTDHKAGFRREQTISSE 180

Query: 181 KAGGAHGPLRASAHIRASARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEK 240
           KAGG+HGPLRASAHIR SARFDYQPDICKDYKETGYCGYGD+CKF+HDRGDYK GWQ+EK
Sbjct: 181 KAGGSHGPLRASAHIRVSARFDYQPDICKDYKETGYCGYGDSCKFLHDRGDYKPGWQIEK 240

Query: 241 EWEEVEKARKRKLAMKSDDGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFC 290
           EWEE EK RKR  AM  +D D++  + SDED E+ALPFACFICREPFVDPVVTKCKHYFC
Sbjct: 241 EWEEAEKVRKRNKAMGVEDEDDEADKDSDED-ENALPFACFICREPFVDPVVTKCKHYFC 300

[Close]

BLAST of Cucsat.G4305.T6 vs. ExPASy Swiss-Prot
Match: Q9FNG6 (Zinc finger CCCH domain-containing protein 51 OS=Arabidopsis thaliana OX=3702 GN=At5g06420 PE=2 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 5.1e-114
Identity = 206/288 (71.53%), Postives = 240/288 (83.33%), Query Frame = 0


Query: 3   DTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEE-DSKAETSFLLNQKKAPKTESKLYF 62
           D  + Q S+QVC+FF+KPTK+KNIRKRT+D DEE+ DSK+E+S L N KK  K +S LYF
Sbjct: 57  DNSNNQESQQVCTFFKKPTKSKNIRKRTIDADEEDGDSKSESSILQNLKKVAKPDSNLYF 116

Query: 63  SSGPSKNSSSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERVL 122
           SSGPS  +S       P +P+F ++SSKEIQV +DS ATATLETETDF++DARAIRERVL
Sbjct: 117 SSGPSTRTSG-----APERPVFHYDSSKEIQVQNDSGATATLETETDFNQDARAIRERVL 176

Query: 123 KQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRAS 182
           K+A+ ALKG  K +  EKLYKG++ Y D+KAGFRRE TISSEKAGG+HGPLRASAHIR S
Sbjct: 177 KKADHALKGNKKKASDEKLYKGIHGYTDHKAGFRREQTISSEKAGGSHGPLRASAHIRVS 236

Query: 183 ARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKSD 242
           ARFDYQPDICKDYKETGYCGYGD+CKF+HDRGDYK GWQ+EKEWEE EK RKR  AM  +
Sbjct: 237 ARFDYQPDICKDYKETGYCGYGDSCKFLHDRGDYKPGWQIEKEWEEAEKVRKRNKAMGVE 296

Query: 243 DGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALK 290
           D D++  + SDED E+ALPFACFICREPF+DPVVTKCKHYFCEHCALK
Sbjct: 297 DDDDEADKDSDED-ENALPFACFICREPFLDPVVTKCKHYFCEHCALK 338

[Close]

BLAST of Cucsat.G4305.T6 vs. ExPASy Swiss-Prot
Match: Q6K4V3 (Zinc finger CCCH domain-containing protein 15 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0301000 PE=2 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 9.3e-100
Identity = 193/291 (66.32%), Postives = 222/291 (76.29%), Query Frame = 0


Query: 10  SEQVCSFFRKPTKNKNIRKRTV-----DEDEEEDSKAETSFLLNQKKAPKTESKLYFSSG 69
           S  VCSF RKP   KNIRKR       D+D+E+ S A  +     KKAP + SKL+FSS 
Sbjct: 15  SAPVCSFVRKPP--KNIRKRPTAPAGSDDDDEDGSGAIAA--ARAKKAPSSTSKLFFSSA 74

Query: 70  PSKNSSSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERVLKQA 129
                   + + EP +  FQ+ESS+ IQ   DSRATATLETET+F RDARAIRER LKQA
Sbjct: 75  --------DGSSEPRR--FQYESSRTIQASTDSRATATLETETEFDRDARAIRERQLKQA 134

Query: 130 EEALK------GKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHI 189
           EE+LK           SG  ++YKG++ Y DYKAGFRREHT+SSEKAGG+HGPLRASAHI
Sbjct: 135 EESLKKNPSAPASSSGSGSGEVYKGIHGYTDYKAGFRREHTVSSEKAGGSHGPLRASAHI 194

Query: 190 RASARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAM 249
           R SARFDYQPDICKDYKETGYCGYGD+CKFMHDRGDYKSGWQ+EKEWEE EKARKR++AM
Sbjct: 195 RLSARFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKSGWQIEKEWEEAEKARKRRIAM 254

Query: 250 KSDDGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALK 290
             D  D +  E+ D+D+E+ALPFAC+ICREPFVDPVVTKCKHYFCEHCALK
Sbjct: 255 GGDGSDYEAGEEDDDDDEEALPFACYICREPFVDPVVTKCKHYFCEHCALK 291

[Close]

BLAST of Cucsat.G4305.T6 vs. ExPASy Swiss-Prot
Match: O17917 (Probable E3 ubiquitin-protein ligase rnf113 OS=Caenorhabditis elegans OX=6239 GN=rnf-113 PE=2 SV=2)

HSP 1 Score: 168.3 bits (425), Expect = 1.3e-40
Identity = 111/285 (38.95%), Postives = 155/285 (54.39%), Query Frame = 0


Query: 17  FRKPTKNKN--IRKRTVDEDEEEDSKAETSFLLNQKKAPKTES--KLYFSSGPSKNSSSN 76
           FRKP K     +RK+    DE++DS+ +      ++  P  +S  +L  S+  + NSS +
Sbjct: 4   FRKPKKRNAPVVRKKESSSDEDQDSEVKDVIQKRRRTNPMVQSTKQLDASTRRADNSSDD 63

Query: 77  ESNVEPNKPI------FQFESSKEIQVHHDSRATATLETETDFSRDARAIRERVLKQAEE 136
             + + N+ I      F            D  ATATLE +TD+S DA+A  ERV +Q +E
Sbjct: 64  SDDSDDNQDIAVATHSFAASGDAGPSGPRDQGATATLEVDTDYSHDAQAQFERVQQQLKE 123

Query: 137 ALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAH--GPLRASAHIRASARF 196
            ++  GK      LYKG   Y   +A    + T     A G +  GP+RA   +R + R+
Sbjct: 124 GVEKDGKI-----LYKGSALYGAKEA----KDTAKGNAASGYNRVGPVRAPQFLRQTVRW 183

Query: 197 DYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKSDDGD 256
           D+ PDICKDYKETG+C +GD+CKF+HDR DYK GW++++E+E                G 
Sbjct: 184 DFAPDICKDYKETGFCTFGDSCKFVHDRSDYKHGWEIDEEYE------------AGKYGA 243

Query: 257 EDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALK 290
           ED +     + +D  P  CFIC  PFVDP+VTKCKHYFC  CALK
Sbjct: 244 EDDANYEIHEGDDTFPEDCFICGNPFVDPIVTKCKHYFCTGCALK 267

[Close]

BLAST of Cucsat.G4305.T6 vs. ExPASy Swiss-Prot
Match: O15541 (E3 ubiquitin-protein ligase RNF113A OS=Homo sapiens OX=9606 GN=RNF113A PE=1 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 3.7e-40
Identity = 115/297 (38.72%), Postives = 162/297 (54.55%), Query Frame = 0


Query: 11  EQVCSF-FRKPTKN--KNIRKRTVDEDEEEDS-----------KAETSFLLNQKKAPKTE 70
           +QVC+F F+KP +      RKR   + E  +S           + E   + +     KT 
Sbjct: 12  DQVCTFLFKKPGRKGAAGRRKRPACDPEPGESGSSSDEGCTVVRPEKKRVTHNPMIQKTR 71

Query: 71  SKLYFSSGPSKNSSSNESNVEPNKPIFQFESSKEIQV--HHDSRATATLETETDFSRDAR 130
                 +     SS  E   EP      ++S++  +     D  ATA  E +T+  RDA+
Sbjct: 72  DSGKQKAAYGDLSSEEEEENEPESLGVVYKSTRSAKPVGPEDMGATAVYELDTEKERDAQ 131

Query: 131 AIRERVLKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGG--AHGPL 190
           AI ER  K  EE L+GK      +K+Y+G+N Y  Y    + + T     + G    GP+
Sbjct: 132 AIFERSQKIQEE-LRGK----EDDKIYRGINNYQKY---MKPKDTSMGNASSGMVRKGPI 191

Query: 191 RASAHIRASARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKAR 250
           RA  H+RA+ R+DYQPDICKDYKETG+CG+GD+CKF+HDR DYK GWQ+E+E +E     
Sbjct: 192 RAPEHLRATVRWDYQPDICKDYKETGFCGFGDSCKFLHDRSDYKHGWQIERELDE----- 251

Query: 251 KRKLAMKSDDGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALK 290
                 +    +++  E   +DEE  +PF CFICR+ F +PVVTKC+HYFCE CAL+
Sbjct: 252 -----GRYGVYEDENYEVGSDDEE--IPFKCFICRQSFQNPVVTKCRHYFCESCALQ 288

[Close]

BLAST of Cucsat.G4305.T6 vs. NCBI nr
Match: XP_004149426.1 (zinc finger CCCH domain-containing protein 1 [Cucumis sativus] >KGN47699.1 hypothetical protein Csa_018272 [Cucumis sativus])

HSP 1 Score: 580 bits (1496), Expect = 2.19e-208
Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 0


Query: 1   MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY 60
           MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY
Sbjct: 1   MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY 60

Query: 61  FSSGPSKNSSSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120
           FSSGPSKNSSSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV
Sbjct: 61  FSSGPSKNSSSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180
           LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

Query: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240
           SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS
Sbjct: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240

Query: 241 DDGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALK 289
           DDGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALK
Sbjct: 241 DDGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALK 289

[Close]

BLAST of Cucsat.G4305.T6 vs. NCBI nr
Match: KAA0055485.1 (zinc finger CCCH domain-containing protein 1 [Cucumis melo var. makuwa] >TYK08965.1 zinc finger CCCH domain-containing protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 573 bits (1478), Expect = 5.19e-206
Identity = 285/291 (97.94%), Postives = 288/291 (98.97%), Query Frame = 0


Query: 1   MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY 60
           MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY
Sbjct: 1   MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY 60

Query: 61  FSSGPSKNSSSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120
           FSSGPSKNS SNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV
Sbjct: 61  FSSGPSKNSLSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180
           LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

Query: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240
           SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS
Sbjct: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240

Query: 241 DDGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKII 291
           DDGDED+SEQSDEDEE ALPFACFICREPFVDPVVTKC HYFCEHCALK++
Sbjct: 241 DDGDEDSSEQSDEDEEGALPFACFICREPFVDPVVTKCGHYFCEHCALKVV 291

[Close]

BLAST of Cucsat.G4305.T6 vs. NCBI nr
Match: XP_008466746.1 (PREDICTED: zinc finger CCCH domain-containing protein 1 [Cucumis melo] >XP_008466747.1 PREDICTED: zinc finger CCCH domain-containing protein 1 [Cucumis melo])

HSP 1 Score: 571 bits (1472), Expect = 9.98e-205
Identity = 285/289 (98.62%), Postives = 286/289 (98.96%), Query Frame = 0


Query: 1   MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY 60
           MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY
Sbjct: 1   MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY 60

Query: 61  FSSGPSKNSSSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120
           FSSGPSKNS SNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV
Sbjct: 61  FSSGPSKNSLSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180
           LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

Query: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240
           SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS
Sbjct: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240

Query: 241 DDGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALK 289
           DDGDED+SEQSDEDEE ALPFACFICREPFVDPVVTKC HYFCEHCALK
Sbjct: 241 DDGDEDSSEQSDEDEEGALPFACFICREPFVDPVVTKCGHYFCEHCALK 289

[Close]

BLAST of Cucsat.G4305.T6 vs. NCBI nr
Match: XP_038884796.1 (zinc finger CCCH domain-containing protein 1 [Benincasa hispida] >XP_038884797.1 zinc finger CCCH domain-containing protein 1 [Benincasa hispida])

HSP 1 Score: 552 bits (1422), Expect = 4.31e-197
Identity = 279/289 (96.54%), Postives = 280/289 (96.89%), Query Frame = 0


Query: 1   MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY 60
           MTDTG+ QP EQVCSFFRKPTKNKNIRKRTVDEDEE  SK ETS LLNQKKAPKTESKLY
Sbjct: 1   MTDTGENQPPEQVCSFFRKPTKNKNIRKRTVDEDEE-GSKTETSLLLNQKKAPKTESKLY 60

Query: 61  FSSGPSKNSSSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120
           FSSGPSKNS SNES  EPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV
Sbjct: 61  FSSGPSKNSLSNES-AEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180
           LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

Query: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240
           SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS
Sbjct: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240

Query: 241 DDGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALK 289
           DDGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALK
Sbjct: 241 DDGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALK 287

[Close]

BLAST of Cucsat.G4305.T6 vs. NCBI nr
Match: XP_022958735.1 (zinc finger CCCH domain-containing protein 1 [Cucurbita moschata])

HSP 1 Score: 543 bits (1398), Expect = 1.89e-193
Identity = 269/289 (93.08%), Postives = 277/289 (95.85%), Query Frame = 0


Query: 1   MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY 60
           MTDTG+ Q  EQVCSFF+KPTKNKNIRKRTVDEDEEE    ETS L NQKKAPKT+SKLY
Sbjct: 1   MTDTGENQQPEQVCSFFKKPTKNKNIRKRTVDEDEEESKSTETSVLQNQKKAPKTDSKLY 60

Query: 61  FSSGPSKNSSSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120
           FSSGPSK++ +NESNVE +KPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV
Sbjct: 61  FSSGPSKSNLTNESNVESDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180
           LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

Query: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240
           SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS
Sbjct: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240

Query: 241 DDGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALK 289
           DDGDED +EQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALK
Sbjct: 241 DDGDEDAAEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALK 289

[Close]

BLAST of Cucsat.G4305.T6 vs. ExPASy TrEMBL
Match: A0A0A0KFS0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G382870 PE=4 SV=1)

HSP 1 Score: 580 bits (1496), Expect = 1.06e-208
Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 0


Query: 1   MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY 60
           MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY
Sbjct: 1   MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY 60

Query: 61  FSSGPSKNSSSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120
           FSSGPSKNSSSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV
Sbjct: 61  FSSGPSKNSSSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180
           LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

Query: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240
           SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS
Sbjct: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240

Query: 241 DDGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALK 289
           DDGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALK
Sbjct: 241 DDGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALK 289

[Close]

BLAST of Cucsat.G4305.T6 vs. ExPASy TrEMBL
Match: A0A5D3CBS9 (Zinc finger CCCH domain-containing protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold314G00590 PE=4 SV=1)

HSP 1 Score: 573 bits (1478), Expect = 2.51e-206
Identity = 285/291 (97.94%), Postives = 288/291 (98.97%), Query Frame = 0


Query: 1   MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY 60
           MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY
Sbjct: 1   MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY 60

Query: 61  FSSGPSKNSSSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120
           FSSGPSKNS SNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV
Sbjct: 61  FSSGPSKNSLSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180
           LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

Query: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240
           SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS
Sbjct: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240

Query: 241 DDGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKII 291
           DDGDED+SEQSDEDEE ALPFACFICREPFVDPVVTKC HYFCEHCALK++
Sbjct: 241 DDGDEDSSEQSDEDEEGALPFACFICREPFVDPVVTKCGHYFCEHCALKVV 291

[Close]

BLAST of Cucsat.G4305.T6 vs. ExPASy TrEMBL
Match: A0A1S3CS03 (zinc finger CCCH domain-containing protein 1 OS=Cucumis melo OX=3656 GN=LOC103504086 PE=4 SV=1)

HSP 1 Score: 571 bits (1472), Expect = 4.83e-205
Identity = 285/289 (98.62%), Postives = 286/289 (98.96%), Query Frame = 0


Query: 1   MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY 60
           MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY
Sbjct: 1   MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY 60

Query: 61  FSSGPSKNSSSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120
           FSSGPSKNS SNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV
Sbjct: 61  FSSGPSKNSLSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180
           LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

Query: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240
           SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS
Sbjct: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240

Query: 241 DDGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALK 289
           DDGDED+SEQSDEDEE ALPFACFICREPFVDPVVTKC HYFCEHCALK
Sbjct: 241 DDGDEDSSEQSDEDEEGALPFACFICREPFVDPVVTKCGHYFCEHCALK 289

[Close]

BLAST of Cucsat.G4305.T6 vs. ExPASy TrEMBL
Match: A0A6J1H4B5 (zinc finger CCCH domain-containing protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111459918 PE=4 SV=1)

HSP 1 Score: 543 bits (1398), Expect = 9.13e-194
Identity = 269/289 (93.08%), Postives = 277/289 (95.85%), Query Frame = 0


Query: 1   MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY 60
           MTDTG+ Q  EQVCSFF+KPTKNKNIRKRTVDEDEEE    ETS L NQKKAPKT+SKLY
Sbjct: 1   MTDTGENQQPEQVCSFFKKPTKNKNIRKRTVDEDEEESKSTETSVLQNQKKAPKTDSKLY 60

Query: 61  FSSGPSKNSSSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120
           FSSGPSK++ +NESNVE +KPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV
Sbjct: 61  FSSGPSKSNLTNESNVESDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180
           LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

Query: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240
           SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS
Sbjct: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240

Query: 241 DDGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALK 289
           DDGDED +EQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALK
Sbjct: 241 DDGDEDAAEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALK 289

[Close]

BLAST of Cucsat.G4305.T6 vs. ExPASy TrEMBL
Match: A0A6J1I9H7 (zinc finger CCCH domain-containing protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111470453 PE=4 SV=1)

HSP 1 Score: 540 bits (1392), Expect = 7.50e-193
Identity = 267/289 (92.39%), Postives = 277/289 (95.85%), Query Frame = 0


Query: 1   MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY 60
           MTDTG+ Q  EQVCSFF+KPTKNKNIRKRTVDEDEE+    ETS L NQKKAPKT+SKLY
Sbjct: 1   MTDTGENQQPEQVCSFFKKPTKNKNIRKRTVDEDEEDSKSTETSVLQNQKKAPKTDSKLY 60

Query: 61  FSSGPSKNSSSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120
           FSSGPSK++ +NESNVE +KPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV
Sbjct: 61  FSSGPSKSNLTNESNVESDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180
           LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

Query: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240
           SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAM+S
Sbjct: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMRS 240

Query: 241 DDGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALK 289
           DDGDED +EQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALK
Sbjct: 241 DDGDEDVAEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALK 289

[Close]

BLAST of Cucsat.G4305.T6 vs. TAIR 10
Match: AT1G01350.1 (Zinc finger (CCCH-type/C3HC4-type RING finger) family protein )

HSP 1 Score: 413.3 bits (1061), Expect = 1.6e-115
Identity = 211/306 (68.95%), Postives = 249/306 (81.37%), Query Frame = 0


Query: 1   MTDTGDTQP----------------SEQVCSFFRKPTKNKNIRKRTVDEDEEE-DSKAET 60
           M+D+G+ +P                S+QVC+FF+KPTK+KNIRKRT+D DEE+ DSK+E+
Sbjct: 1   MSDSGEPKPSQQEEPLPQPAAQETQSQQVCTFFKKPTKSKNIRKRTIDADEEDGDSKSES 60

Query: 61  SFLLNQKKAPKTESKLYFSSGPSKNSSSNESNVEPNKPIFQFESSKEIQVHHDSRATATL 120
           S L N KK  K +SKLYFSSGPSK+S++      P + +F ++SSKEIQV +DS ATATL
Sbjct: 61  SILQNLKKVAKPDSKLYFSSGPSKSSTTTSG--APERSVFHYDSSKEIQVQNDSGATATL 120

Query: 121 ETETDFSRDARAIRERVLKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSE 180
           ETETDF++DARAIRERVLK+A+EALKG  K +  EKLYKG++ Y D+KAGFRRE TISSE
Sbjct: 121 ETETDFNQDARAIRERVLKKADEALKGNKKKASDEKLYKGIHGYTDHKAGFRREQTISSE 180

Query: 181 KAGGAHGPLRASAHIRASARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEK 240
           KAGG+HGPLRASAHIR SARFDYQPDICKDYKETGYCGYGD+CKF+HDRGDYK GWQ+EK
Sbjct: 181 KAGGSHGPLRASAHIRVSARFDYQPDICKDYKETGYCGYGDSCKFLHDRGDYKPGWQIEK 240

Query: 241 EWEEVEKARKRKLAMKSDDGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFC 290
           EWEE EK RKR  AM  +D D++  + SDED E+ALPFACFICREPFVDPVVTKCKHYFC
Sbjct: 241 EWEEAEKVRKRNKAMGVEDEDDEADKDSDED-ENALPFACFICREPFVDPVVTKCKHYFC 300

[Close]

BLAST of Cucsat.G4305.T6 vs. TAIR 10
Match: AT5G06420.1 (Zinc finger (CCCH-type/C3HC4-type RING finger) family protein )

HSP 1 Score: 412.1 bits (1058), Expect = 3.6e-115
Identity = 206/288 (71.53%), Postives = 240/288 (83.33%), Query Frame = 0


Query: 3   DTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEE-DSKAETSFLLNQKKAPKTESKLYF 62
           D  + Q S+QVC+FF+KPTK+KNIRKRT+D DEE+ DSK+E+S L N KK  K +S LYF
Sbjct: 57  DNSNNQESQQVCTFFKKPTKSKNIRKRTIDADEEDGDSKSESSILQNLKKVAKPDSNLYF 116

Query: 63  SSGPSKNSSSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERVL 122
           SSGPS  +S       P +P+F ++SSKEIQV +DS ATATLETETDF++DARAIRERVL
Sbjct: 117 SSGPSTRTSG-----APERPVFHYDSSKEIQVQNDSGATATLETETDFNQDARAIRERVL 176

Query: 123 KQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRAS 182
           K+A+ ALKG  K +  EKLYKG++ Y D+KAGFRRE TISSEKAGG+HGPLRASAHIR S
Sbjct: 177 KKADHALKGNKKKASDEKLYKGIHGYTDHKAGFRREQTISSEKAGGSHGPLRASAHIRVS 236

Query: 183 ARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKSD 242
           ARFDYQPDICKDYKETGYCGYGD+CKF+HDRGDYK GWQ+EKEWEE EK RKR  AM  +
Sbjct: 237 ARFDYQPDICKDYKETGYCGYGDSCKFLHDRGDYKPGWQIEKEWEEAEKVRKRNKAMGVE 296

Query: 243 DGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALK 290
           D D++  + SDED E+ALPFACFICREPF+DPVVTKCKHYFCEHCALK
Sbjct: 297 DDDDEADKDSDED-ENALPFACFICREPFLDPVVTKCKHYFCEHCALK 338

[Close]

BLAST of Cucsat.G4305.T6 vs. TAIR 10
Match: AT5G06420.2 (Zinc finger (CCCH-type/C3HC4-type RING finger) family protein )

HSP 1 Score: 412.1 bits (1058), Expect = 3.6e-115
Identity = 206/288 (71.53%), Postives = 240/288 (83.33%), Query Frame = 0


Query: 3   DTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEE-DSKAETSFLLNQKKAPKTESKLYF 62
           D  + Q S+QVC+FF+KPTK+KNIRKRT+D DEE+ DSK+E+S L N KK  K +S LYF
Sbjct: 57  DNSNNQESQQVCTFFKKPTKSKNIRKRTIDADEEDGDSKSESSILQNLKKVAKPDSNLYF 116

Query: 63  SSGPSKNSSSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERVL 122
           SSGPS  +S       P +P+F ++SSKEIQV +DS ATATLETETDF++DARAIRERVL
Sbjct: 117 SSGPSTRTSG-----APERPVFHYDSSKEIQVQNDSGATATLETETDFNQDARAIRERVL 176

Query: 123 KQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRAS 182
           K+A+ ALKG  K +  EKLYKG++ Y D+KAGFRRE TISSEKAGG+HGPLRASAHIR S
Sbjct: 177 KKADHALKGNKKKASDEKLYKGIHGYTDHKAGFRREQTISSEKAGGSHGPLRASAHIRVS 236

Query: 183 ARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKSD 242
           ARFDYQPDICKDYKETGYCGYGD+CKF+HDRGDYK GWQ+EKEWEE EK RKR  AM  +
Sbjct: 237 ARFDYQPDICKDYKETGYCGYGDSCKFLHDRGDYKPGWQIEKEWEEAEKVRKRNKAMGVE 296

Query: 243 DGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALK 290
           D D++  + SDED E+ALPFACFICREPF+DPVVTKCKHYFCEHCALK
Sbjct: 297 DDDDEADKDSDED-ENALPFACFICREPFLDPVVTKCKHYFCEHCALK 338

[Close]

BLAST of Cucsat.G4305.T6 vs. TAIR 10
Match: AT4G01023.1 (RING/U-box superfamily protein )

HSP 1 Score: 64.3 bits (155), Expect = 1.9e-10
Identity = 34/81 (41.98%), Postives = 47/81 (58.02%), Query Frame = 0


Query: 209 MHDRGDYKSGWQLEKEWEEVEKARKRKLAMKSDDGDEDTSEQSDEDEEDALPFACFICRE 268
           + D        +LEK  ++++K   RKL        E     + E+++DALP AC IC+ 
Sbjct: 40  VEDEDSNNESSRLEKLEKKIKKETARKL--------ETDFVLTGEEDDDALPLACSICQN 99

Query: 269 PFVDPVVTKCKHYFCEHCALK 290
           PF+DPVVT C HYFC+ CALK
Sbjct: 100 PFLDPVVTNCNHYFCDKCALK 112

The following BLAST results are available for this feature:

BLAST of Cucsat.G4305.T6 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GX84	2.3e-114	68.95	Zinc finger CCCH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9FNG6	5.1e-114	71.53	Zinc finger CCCH domain-containing protein 51 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q6K4V3	9.3e-100	66.32	Zinc finger CCCH domain-containing protein 15 OS=Oryza sativa subsp. japonica OX...	[more]
O17917	1.3e-40	38.95	Probable E3 ubiquitin-protein ligase rnf113 OS=Caenorhabditis elegans OX=6239 GN...	[more]
O15541	3.7e-40	38.72	E3 ubiquitin-protein ligase RNF113A OS=Homo sapiens OX=9606 GN=RNF113A PE=1 SV=1	[more]

BLAST of Cucsat.G4305.T6 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149426.1	2.19e-208	100.00	zinc finger CCCH domain-containing protein 1 [Cucumis sativus] >KGN47699.1 hypot...	[more]
KAA0055485.1	5.19e-206	97.94	zinc finger CCCH domain-containing protein 1 [Cucumis melo var. makuwa] >TYK0896...	[more]
XP_008466746.1	9.98e-205	98.62	PREDICTED: zinc finger CCCH domain-containing protein 1 [Cucumis melo] >XP_00846...	[more]
XP_038884796.1	4.31e-197	96.54	zinc finger CCCH domain-containing protein 1 [Benincasa hispida] >XP_038884797.1...	[more]
XP_022958735.1	1.89e-193	93.08	zinc finger CCCH domain-containing protein 1 [Cucurbita moschata]	[more]

BLAST of Cucsat.G4305.T6 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KFS0	1.06e-208	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G382870 PE=4 SV=1	[more]
A0A5D3CBS9	2.51e-206	97.94	Zinc finger CCCH domain-containing protein 1 OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A1S3CS03	4.83e-205	98.62	zinc finger CCCH domain-containing protein 1 OS=Cucumis melo OX=3656 GN=LOC10350...	[more]
A0A6J1H4B5	9.13e-194	93.08	zinc finger CCCH domain-containing protein 1 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1I9H7	7.50e-193	92.39	zinc finger CCCH domain-containing protein 1 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]

BLAST of Cucsat.G4305.T6 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G01350.1	1.6e-115	68.95	Zinc finger (CCCH-type/C3HC4-type RING finger) family protein	[more]
AT5G06420.1	3.6e-115	71.53	Zinc finger (CCCH-type/C3HC4-type RING finger) family protein	[more]
AT5G06420.2	3.6e-115	71.53	Zinc finger (CCCH-type/C3HC4-type RING finger) family protein	[more]
AT4G01023.1	1.9e-10	41.98	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 185..212 e-value: 1.8E-7 score: 40.8
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 186..211 e-value: 5.6E-10 score: 38.9
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 185..213 score: 14.577143
None	No IPR available	GENE3D	4.10.1000.10		coord: 183..215 e-value: 1.6E-6 score: 29.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..19
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..86
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 234..254
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..103
None	No IPR available	PANTHER	PTHR12930:SF9	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 1-LIKE	coord: 1..289
None	No IPR available	CDD	cd16539	RING-HC_RNF113A_B	coord: 261..289 e-value: 3.0046E-17 score: 71.8779
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 262..289
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 216..293 e-value: 3.1E-11 score: 44.9
IPR018957	Zinc finger, C3HC4 RING-type	PFAM	PF00097	zf-C3HC4	coord: 263..292 e-value: 4.3E-6 score: 26.5
IPR039971	Pre-mRNA-splicing factor CWC24-like	PANTHER	PTHR12930	ZINC FINGER PROTEIN 183	coord: 1..289
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 263..286 score: 8.535474
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 184..216

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G4305	Cucsat.G4305	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G4305.T6.E1	Cucsat.G4305.T6.E1	exon
Cucsat.G4305.T6.E2	Cucsat.G4305.T6.E2	exon
Cucsat.G4305.T6.E3	Cucsat.G4305.T6.E3	exon
Cucsat.G4305.T6.E4	Cucsat.G4305.T6.E4	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G4305.T6.C1	Cucsat.G4305.T6.C1	CDS
Cucsat.G4305.T6.C2	Cucsat.G4305.T6.C2	CDS
Cucsat.G4305.T6.C3	Cucsat.G4305.T6.C3	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G4305.T6	Cucsat.G4305.T6-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034247	snoRNA splicing
cellular_component	GO:0000932	P-body
cellular_component	GO:0005684	U2-type spliceosomal complex
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046983	protein dimerization activity