Cucsat.G4305.T10 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G4305.T10
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	BED-type domain-containing protein
Location	ctg1170: 162957 .. 164707 (+)
RNA-Seq Expression	Cucsat.G4305.T10
Synteny	Cucsat.G4305.T10

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTTCTTCACACAAAACGAGTGCTGCGGCTGCCATTACTCTGTTTTTTGGTGCACACGACTCTTCATCTACTTCTTCAGTTCTTCGTCTTCCGTTCTGCTTCTACTTCAGTTCTTCGTCTTCGTCTTCCGTTTGCTTCCTTTTCCACCCTTCCGTTCCGGCCACCCTTCTTCTTCACACAAAACGAGTGCTGCGGCTGCCATTACTCTGTTTTTTGGTGCAAAAACAGAGGAAAAGAGAAGACAATAATATTCTGTGCTACAGTGCTGCTAGTGCTTCAGTTTTCGCCTCCTCCATCTCAGCTTTATCACGGGTTAGTATCTCAATCGTTCAGTTAACATCTGCATTGCTTTCTCCTTCTTCTGTAACTCTTTGACAAGAACATCAAACTCCATTGTTTTCTGTTTTCATAGCATGGTATACCCATTGAGTTAGAAAAAACTCTCTAAAGTCTACATCTTCTTCTTCTTATACTTCTCAACTTCAACTTCCTTCGATAACCCATCAAACTCAACCTTCATCCCATCCATCTCACAACACACTCCCCTCCAATCCTCCATTTATAACAACTTCATCCCATCCATAGATAGCTTCTGTTTTTTTTTTTTTTAATAACAGCTGCTGTTTTAAATAGTTTCTGTTTTTTTTTTTATAACTTAGATCATAGATGGCTGATGAAAGTTCGAGAAAAGATCCGGCATGGAAATATGGTCAATTGCAAAATGACCAAAATATAAATACGTTTGTCTGTGGATTTTGTTCGAAAGTAACAAAAGGAGGGGTATATAGAATGAAACAACACCTCGTTGGTGGTTATAGAAATGTCACCGCCTGTACAAAATGTCCAGATCACGTGAAGGAAGAAATTAAAGAGTACATGTCCAAGAAAAAAGATATTAAAGAACAAAGAAATCTGATTGTGGACATTGATGTAGAAGATTATGATATTGAGGATGAAGATGAAGGGAGTGTTAGTGTAAACAACAAAGCAACACCAAGGGGCCCGAGCTTGAAGAAGCCAAGGCAAAAGGGTCCAATGGATGCATTTTTTACTCCTAACCCAGAAACTGTGGTTCAAAATAGAAAGGACAAAGGAAAACAAACTTCATTGAATGCGACATACAAGAAGGAAATGAGAGAGCACACCATCCAAAGAATTGCTCGATGGTTTTATGATGCAGGAGTGCCTTTGAATGCAGCGGGGTATTATTTAAACCCGTCATTCTATTATTCGAATCCTAACATCCAGGAGGATGATGAAATAGTTAATGGACTCTACTCATGCATAACGAAAATGGTTGCTTCATTGGAAGTACAAGACAAAATACTTGCAGAACTAAGCAAGTATAAGAGGGCTGAAGCATTATTCGGACAACCTTTAGCAATCAGACAAAGGGACAAAATATCTCCAGGTAAATTTCAACTAAACGATTATTCAACGATACTAGCAACAAGCTCTTCTATTAATATATATATTTTTTTGTTTGTGCCTATAGTGGAATGGTGGGATAATTTTGGACAATCAACTCCAAACTTGCAAAAGTTTGCTGTGAGAATTTTAGGTCTTACTTGTAGTGCTTCTGGATGCGAGCGTAATTGGAGTGTGTTTGAACAGGTTACCTTTCCTCTCCTTAAATACATTGAGAATGATAATCAAAATTTGTTGATTCACTAACAATGAAACTTTCTAATTTTTCAGCTTCATAGCAAGAAACGAAATAGGCTTGCTCAAAGTCGTTTGAATGATCTAG

Coding sequence (CDS)

ATGGCTGATGAAAGTTCGAGAAAAGATCCGGCATGGAAATATGGTCAATTGCAAAATGACCAAAATATAAATACGTTTGTCTGTGGATTTTGTTCGAAAGTAACAAAAGGAGGGGTATATAGAATGAAACAACACCTCGTTGGTGGTTATAGAAATGTCACCGCCTGTACAAAATGTCCAGATCACGTGAAGGAAGAAATTAAAGAGTACATGTCCAAGAAAAAAGATATTAAAGAACAAAGAAATCTGATTGTGGACATTGATGTAGAAGATTATGATATTGAGGATGAAGATGAAGGGAGTGTTAGTGTAAACAACAAAGCAACACCAAGGGGCCCGAGCTTGAAGAAGCCAAGGCAAAAGGGTCCAATGGATGCATTTTTTACTCCTAACCCAGAAACTGTGGTTCAAAATAGAAAGGACAAAGGAAAACAAACTTCATTGAATGCGACATACAAGAAGGAAATGAGAGAGCACACCATCCAAAGAATTGCTCGATGGTTTTATGATGCAGGAGTGCCTTTGAATGCAGCGGGGTATTATTTAAACCCGTCATTCTATTATTCGAATCCTAACATCCAGGAGGATGATGAAATAGTTAATGGACTCTACTCATGCATAACGAAAATGGTTGCTTCATTGGAAGTACAAGACAAAATACTTGCAGAACTAAGCAAGTATAAGAGGGCTGAAGCATTATTCGGACAACCTTTAGCAATCAGACAAAGGGACAAAATATCTCCAGTGGAATGGTGGGATAATTTTGGACAATCAACTCCAAACTTGCAAAAGTTTGCTGTGAGAATTTTAGGTCTTACTTGTAGTGCTTCTGGATGCGAGCGTAATTGGAGTGTGTTTGAACAGCTTCATAGCAAGAAACGAAATAGGCTTGCTCAAAGTCGTTTGAATGATCTA

Protein sequence

MADESSRKDPAWKYGQLQNDQNINTFVCGFCSKVTKGGVYRMKQHLVGGYRNVTACTKCPDHVKEEIKEYMSKKKDIKEQRNLIVDIDVEDYDIEDEDEGSVSVNNKATPRGPSLKKPRQKGPMDAFFTPNPETVVQNRKDKGKQTSLNATYKKEMREHTIQRIARWFYDAGVPLNAAGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKRAEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSASGCERNWSVFEQLHSKKRNRLAQSRLNDL

Homology

[Close]

BLAST of Cucsat.G4305.T10 vs. NCBI nr
Match: XP_031741477.1 (uncharacterized protein LOC105435633 [Cucumis sativus])

HSP 1 Score: 483 bits (1243), Expect = 2.86e-163
Identity = 303/634 (47.79%), Postives = 303/634 (47.79%), Query Frame = 0


Query: 1   MADESSRKDPAWKYGQLQNDQNINTFVCGFCSKVTKGGVYRMKQHLVGGYRNVTACTKCP 60
           MADESSRKDPAWKYGQLQNDQNINTFVCGFCSKVTKGGVYRMKQHLVGGYRNVTACTKCP
Sbjct: 1   MADESSRKDPAWKYGQLQNDQNINTFVCGFCSKVTKGGVYRMKQHLVGGYRNVTACTKCP 60

Query: 61  DHVKEEIKEYMSKKKDIKEQRNLIVDIDVEDYDIEDEDEGSVSVNNKATPRGPSLKKPRQ 120
           DHVKEEIKEYMSKKKDIKEQRNLIVDIDVEDYDIEDEDEGSVSVNNKATPRGPSLKKPRQ
Sbjct: 61  DHVKEEIKEYMSKKKDIKEQRNLIVDIDVEDYDIEDEDEGSVSVNNKATPRGPSLKKPRQ 120

Query: 121 KGPMDAFFTPNPETVVQNRKDKGKQTSLNATYKKEMREHTIQRIARWFYDAGVPLNA--- 180
           KGPMDAFFTPNPETVVQNRKDKGKQTSLNATYKKEMREHTIQRIARWFYDAGVPLNA   
Sbjct: 121 KGPMDAFFTPNPETVVQNRKDKGKQTSLNATYKKEMREHTIQRIARWFYDAGVPLNACTY 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 ESFAPMIESIGQFGPGLKPPSYHELRVPCLKKELEATNELMSNHKVEWAKVGCTVMADGW 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 TDRRNRTLINFLVNSPKGTMFIESIDASFYVKDGKKMFELLDNFVDQIGEANVVQVVTDS 300

Query: 301 ------------------------------------------------------------ 305
                                                                       
Sbjct: 301 ASANVMAGRLLEAKRPQLIWSPCAAHCLDLMLEDIYKISNIRKALKRGIEISNFIYVHPG 360

[Close]

BLAST of Cucsat.G4305.T10 vs. NCBI nr
Match: KAA0047882.1 (hypothetical protein E6C27_scaffold133G001550 [Cucumis melo var. makuwa])

HSP 1 Score: 475 bits (1223), Expect = 2.61e-161
Identity = 280/552 (50.72%), Postives = 296/552 (53.62%), Query Frame = 0


Query: 1   MADESSRKDPAWKYGQLQNDQNINTFVCGFCSKVTKGGVYRMKQHLVGGYRNVTACTKCP 60
           MADESS+KDPAWKYG+LQNDQ+INTFVCGFCSKVTKGGVYR+KQHLVGGYRN  AC KCP
Sbjct: 1   MADESSKKDPAWKYGRLQNDQDINTFVCGFCSKVTKGGVYRLKQHLVGGYRNAIACKKCP 60

Query: 61  DHVKEEIKEYMSKKKDIKEQRNLIVDIDVEDYDIEDEDEGSVSVNNKATPRGPSLKKPRQ 120
           DHVKEEI++YMSKKK+IKEQRNLIVDIDV+DY +EDEDEGS+SVNN+AT  G SLKKPRQ
Sbjct: 61  DHVKEEIRDYMSKKKEIKEQRNLIVDIDVQDYGMEDEDEGSISVNNRATSSGSSLKKPRQ 120

Query: 121 KGPMDAFFTPNPETVVQNRK-DKGKQTSLNATYKKEMREHTIQRIARWFYDAGVPLNA-- 180
           KGPMDAFFTPNPE+VVQNRK DKGKQTSLNA YKKEMREHTIQRIARWFYDAGVPLNA  
Sbjct: 121 KGPMDAFFTPNPESVVQNRKNDKGKQTSLNAAYKKEMREHTIQRIARWFYDAGVPLNACT 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 YDSFAPMIESIGQFGPGLKPPTYHELRVPCLKKELEATNELMSSHKAEWAKVGCTVMADG 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 WTDRRNRTLINFLVNSPKGTMFIESIDASSYVKDGKKMFELLDNFVERIGEANVVQVVTD 300

Query: 301 ------------------------------------------------------------ 305
                                                                       
Sbjct: 301 SASANVMAGRLLEAKRPQLIWSPCAAHCLDLMLEDIYKISNIRKALKRGMEISNFIYVLS 360

[Close]

BLAST of Cucsat.G4305.T10 vs. NCBI nr
Match: XP_031745317.1 (uncharacterized protein LOC116405444 [Cucumis sativus])

HSP 1 Score: 456 bits (1174), Expect = 5.61e-152
Identity = 305/708 (43.08%), Postives = 305/708 (43.08%), Query Frame = 0


Query: 1   MADESSRKDPAWKYGQLQNDQNINTFVCGFCSKVTKGGVYRMKQHLVGGYRNVTACTKCP 60
           MADESSRKDPAWKYGQLQNDQNINTFVCGFCSKVTKGGVYRMKQHLVGGYRNVTACTKCP
Sbjct: 1   MADESSRKDPAWKYGQLQNDQNINTFVCGFCSKVTKGGVYRMKQHLVGGYRNVTACTKCP 60

Query: 61  DHVKEEIKEYMSKKKDIKEQRNLIVDIDVEDYDIEDEDEGSVSVNNKATPRGPSLKKPRQ 120
           DHVKEEIKEYMSKKKDIKEQRNLIVDIDVEDYDIEDEDEGSVSVNNKATPRGPSLKKPRQ
Sbjct: 61  DHVKEEIKEYMSKKKDIKEQRNLIVDIDVEDYDIEDEDEGSVSVNNKATPRGPSLKKPRQ 120

Query: 121 KGPMDAFFTPNPETVVQNRKDKGKQTSLNATYKKEMREHTIQRIARWFYDAGVPLNA--- 180
           KGPMDAFFTPNPETVVQNRKDKGKQTSLNATYKKEMREHTIQRIARWFYDAGVPLNA   
Sbjct: 121 KGPMDAFFTPNPETVVQNRKDKGKQTSLNATYKKEMREHTIQRIARWFYDAGVPLNACTY 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 ESFAPMIESIGQFGPGLKPPSYHELRVPCLKKELEATNELMSNHKVEWAKVGCTVMADGW 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 TDRRNRTLINFLVNSPKGTMFIESIDASFYVKDGKKMFELLDNFVDQIGEANVVQVVTDS 300

Query: 301 ------------------------------------------------------------ 305
                                                                       
Sbjct: 301 ASANVMAGRLLEAKRPQLTWSPCAAHCLDLMLEDIYKISNIRKALKRGIEISNFIYVRPG 360

[Close]

BLAST of Cucsat.G4305.T10 vs. NCBI nr
Match: KAA0062061.1 (hypothetical protein E6C27_scaffold89G004030 [Cucumis melo var. makuwa])

HSP 1 Score: 445 bits (1145), Expect = 1.73e-148
Identity = 281/635 (44.25%), Postives = 297/635 (46.77%), Query Frame = 0


Query: 1   MADESSRKDPAWKYGQLQNDQNINTFVCGFCSKVTKGGVYRMKQHLVGGYRNVTACTKCP 60
           MADESS+KDPAWKYG+LQN+Q+INTFVCGFCSKVTKGGVYR+KQHLVGGYRN  AC KCP
Sbjct: 1   MADESSKKDPAWKYGRLQNEQDINTFVCGFCSKVTKGGVYRLKQHLVGGYRNAIACKKCP 60

Query: 61  DHVKEEIKEYMSKKKDIKEQRNLIVDIDVEDYDIEDEDEGSVSVNNKATPRGPSLKKPRQ 120
           DHVKEEI++YMSKKK+IKEQRNLIVDIDV+DY +EDEDEGS+SVNN+AT  G SLKKPRQ
Sbjct: 61  DHVKEEIRDYMSKKKEIKEQRNLIVDIDVQDYGMEDEDEGSISVNNRATSSGSSLKKPRQ 120

Query: 121 KGPMDAFFTPNPETVVQNRK-DKGKQTSLNATYKKEMREHTIQRIARWFYDAGVPLNA-- 180
           KGPMDAFFTPNPE+VVQNRK DKGKQTSLNA YKKEMREHTIQRIARWFYDAGVPLNA  
Sbjct: 121 KGPMDAFFTPNPESVVQNRKNDKGKQTSLNAAYKKEMREHTIQRIARWFYDAGVPLNACT 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 YDSFAPMIESIGQFGPGLKPPTYHELRVPCLKKELEATNELMSSHKAEWAKVGCTVMADG 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 WTDRRNRTLINFLVNSPKGTMFIESIDASSYVKDGKKMFELLDNFVERIGEANVVQVVTD 300

Query: 301 ------------------------------------------------------------ 305
                                                                       
Sbjct: 301 SASANVMAGRLLEAKRPQLIWSPCAAHCLDLMLEDIYKISNIRKALKRGMEISNFIYVRP 360

[Close]

BLAST of Cucsat.G4305.T10 vs. NCBI nr
Match: KAA0041802.1 (hypothetical protein E6C27_scaffold67G001750 [Cucumis melo var. makuwa] >KAA0048513.1 hypothetical protein E6C27_scaffold61G001320 [Cucumis melo var. makuwa])

HSP 1 Score: 445 bits (1144), Expect = 2.44e-148
Identity = 280/635 (44.09%), Postives = 297/635 (46.77%), Query Frame = 0


Query: 1   MADESSRKDPAWKYGQLQNDQNINTFVCGFCSKVTKGGVYRMKQHLVGGYRNVTACTKCP 60
           MADESS+KDPAWKYG+LQN+Q+INTFVCGFCSKVTKGGVYR+KQHLVGGYRN  AC KCP
Sbjct: 1   MADESSKKDPAWKYGRLQNEQDINTFVCGFCSKVTKGGVYRLKQHLVGGYRNAIACKKCP 60

Query: 61  DHVKEEIKEYMSKKKDIKEQRNLIVDIDVEDYDIEDEDEGSVSVNNKATPRGPSLKKPRQ 120
           DHVKEEI++YMSKKK+IKEQRNLIVDIDV+DY +EDEDEGS+SVNN+AT  G SLKKPRQ
Sbjct: 61  DHVKEEIRDYMSKKKEIKEQRNLIVDIDVQDYGMEDEDEGSISVNNRATSSGSSLKKPRQ 120

Query: 121 KGPMDAFFTPNPETVVQNRK-DKGKQTSLNATYKKEMREHTIQRIARWFYDAGVPLNA-- 180
           KGPMDAFFTPNPE+VVQNRK DKGKQTSLNA YKKEMREHTIQRIARWFYDAGVPLNA  
Sbjct: 121 KGPMDAFFTPNPESVVQNRKNDKGKQTSLNAAYKKEMREHTIQRIARWFYDAGVPLNACT 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 YDSFAPMIESIGQFGPGLKPPTYHELRVPCLKKELEATNELMSSHKAEWAKVGCTVMADG 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 WTDRRNRTLINFLVNSPKGTMFIESIDASSYVKDGKKMFELLDNFVERIGEANVVQVVTD 300

Query: 301 ------------------------------------------------------------ 305
                                                                       
Sbjct: 301 SASANVMAGRLLEAKRPQLIWSPCAAHCLDLMLEDIYKISNIRKALKRGMEISNFIYVRP 360

[Close]

BLAST of Cucsat.G4305.T10 vs. ExPASy TrEMBL
Match: A0A5A7TWK3 (BED-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G001550 PE=4 SV=1)

HSP 1 Score: 475 bits (1223), Expect = 1.27e-161
Identity = 280/552 (50.72%), Postives = 296/552 (53.62%), Query Frame = 0


Query: 1   MADESSRKDPAWKYGQLQNDQNINTFVCGFCSKVTKGGVYRMKQHLVGGYRNVTACTKCP 60
           MADESS+KDPAWKYG+LQNDQ+INTFVCGFCSKVTKGGVYR+KQHLVGGYRN  AC KCP
Sbjct: 1   MADESSKKDPAWKYGRLQNDQDINTFVCGFCSKVTKGGVYRLKQHLVGGYRNAIACKKCP 60

Query: 61  DHVKEEIKEYMSKKKDIKEQRNLIVDIDVEDYDIEDEDEGSVSVNNKATPRGPSLKKPRQ 120
           DHVKEEI++YMSKKK+IKEQRNLIVDIDV+DY +EDEDEGS+SVNN+AT  G SLKKPRQ
Sbjct: 61  DHVKEEIRDYMSKKKEIKEQRNLIVDIDVQDYGMEDEDEGSISVNNRATSSGSSLKKPRQ 120

Query: 121 KGPMDAFFTPNPETVVQNRK-DKGKQTSLNATYKKEMREHTIQRIARWFYDAGVPLNA-- 180
           KGPMDAFFTPNPE+VVQNRK DKGKQTSLNA YKKEMREHTIQRIARWFYDAGVPLNA  
Sbjct: 121 KGPMDAFFTPNPESVVQNRKNDKGKQTSLNAAYKKEMREHTIQRIARWFYDAGVPLNACT 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 YDSFAPMIESIGQFGPGLKPPTYHELRVPCLKKELEATNELMSSHKAEWAKVGCTVMADG 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 WTDRRNRTLINFLVNSPKGTMFIESIDASSYVKDGKKMFELLDNFVERIGEANVVQVVTD 300

Query: 301 ------------------------------------------------------------ 305
                                                                       
Sbjct: 301 SASANVMAGRLLEAKRPQLIWSPCAAHCLDLMLEDIYKISNIRKALKRGMEISNFIYVLS 360

[Close]

BLAST of Cucsat.G4305.T10 vs. ExPASy TrEMBL
Match: A0A5A7V8P5 (BED-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G004030 PE=4 SV=1)

HSP 1 Score: 445 bits (1145), Expect = 8.36e-149
Identity = 281/635 (44.25%), Postives = 297/635 (46.77%), Query Frame = 0


Query: 1   MADESSRKDPAWKYGQLQNDQNINTFVCGFCSKVTKGGVYRMKQHLVGGYRNVTACTKCP 60
           MADESS+KDPAWKYG+LQN+Q+INTFVCGFCSKVTKGGVYR+KQHLVGGYRN  AC KCP
Sbjct: 1   MADESSKKDPAWKYGRLQNEQDINTFVCGFCSKVTKGGVYRLKQHLVGGYRNAIACKKCP 60

Query: 61  DHVKEEIKEYMSKKKDIKEQRNLIVDIDVEDYDIEDEDEGSVSVNNKATPRGPSLKKPRQ 120
           DHVKEEI++YMSKKK+IKEQRNLIVDIDV+DY +EDEDEGS+SVNN+AT  G SLKKPRQ
Sbjct: 61  DHVKEEIRDYMSKKKEIKEQRNLIVDIDVQDYGMEDEDEGSISVNNRATSSGSSLKKPRQ 120

Query: 121 KGPMDAFFTPNPETVVQNRK-DKGKQTSLNATYKKEMREHTIQRIARWFYDAGVPLNA-- 180
           KGPMDAFFTPNPE+VVQNRK DKGKQTSLNA YKKEMREHTIQRIARWFYDAGVPLNA  
Sbjct: 121 KGPMDAFFTPNPESVVQNRKNDKGKQTSLNAAYKKEMREHTIQRIARWFYDAGVPLNACT 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 YDSFAPMIESIGQFGPGLKPPTYHELRVPCLKKELEATNELMSSHKAEWAKVGCTVMADG 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 WTDRRNRTLINFLVNSPKGTMFIESIDASSYVKDGKKMFELLDNFVERIGEANVVQVVTD 300

Query: 301 ------------------------------------------------------------ 305
                                                                       
Sbjct: 301 SASANVMAGRLLEAKRPQLIWSPCAAHCLDLMLEDIYKISNIRKALKRGMEISNFIYVRP 360

[Close]

BLAST of Cucsat.G4305.T10 vs. ExPASy TrEMBL
Match: A0A5A7TY62 (BED-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold61G001320 PE=4 SV=1)

HSP 1 Score: 445 bits (1144), Expect = 1.18e-148
Identity = 280/635 (44.09%), Postives = 297/635 (46.77%), Query Frame = 0


Query: 1   MADESSRKDPAWKYGQLQNDQNINTFVCGFCSKVTKGGVYRMKQHLVGGYRNVTACTKCP 60
           MADESS+KDPAWKYG+LQN+Q+INTFVCGFCSKVTKGGVYR+KQHLVGGYRN  AC KCP
Sbjct: 1   MADESSKKDPAWKYGRLQNEQDINTFVCGFCSKVTKGGVYRLKQHLVGGYRNAIACKKCP 60

Query: 61  DHVKEEIKEYMSKKKDIKEQRNLIVDIDVEDYDIEDEDEGSVSVNNKATPRGPSLKKPRQ 120
           DHVKEEI++YMSKKK+IKEQRNLIVDIDV+DY +EDEDEGS+SVNN+AT  G SLKKPRQ
Sbjct: 61  DHVKEEIRDYMSKKKEIKEQRNLIVDIDVQDYGMEDEDEGSISVNNRATSSGSSLKKPRQ 120

Query: 121 KGPMDAFFTPNPETVVQNRK-DKGKQTSLNATYKKEMREHTIQRIARWFYDAGVPLNA-- 180
           KGPMDAFFTPNPE+VVQNRK DKGKQTSLNA YKKEMREHTIQRIARWFYDAGVPLNA  
Sbjct: 121 KGPMDAFFTPNPESVVQNRKNDKGKQTSLNAAYKKEMREHTIQRIARWFYDAGVPLNACT 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 YDSFAPMIESIGQFGPGLKPPTYHELRVPCLKKELEATNELMSSHKAEWAKVGCTVMADG 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 WTDRRNRTLINFLVNSPKGTMFIESIDASSYVKDGKKMFELLDNFVERIGEANVVQVVTD 300

Query: 301 ------------------------------------------------------------ 305
                                                                       
Sbjct: 301 SASANVMAGRLLEAKRPQLIWSPCAAHCLDLMLEDIYKISNIRKALKRGMEISNFIYVRP 360

[Close]

BLAST of Cucsat.G4305.T10 vs. ExPASy TrEMBL
Match: A0A5A7VJR4 (BED-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold238G00160 PE=4 SV=1)

HSP 1 Score: 444 bits (1141), Expect = 3.34e-148
Identity = 279/635 (43.94%), Postives = 297/635 (46.77%), Query Frame = 0


Query: 1   MADESSRKDPAWKYGQLQNDQNINTFVCGFCSKVTKGGVYRMKQHLVGGYRNVTACTKCP 60
           MADESS+KDPAWKYG+LQN+Q+INTFVCGFCSKVTKGGVYR+KQHLVGGYRN  AC KCP
Sbjct: 1   MADESSKKDPAWKYGRLQNEQDINTFVCGFCSKVTKGGVYRLKQHLVGGYRNAIACKKCP 60

Query: 61  DHVKEEIKEYMSKKKDIKEQRNLIVDIDVEDYDIEDEDEGSVSVNNKATPRGPSLKKPRQ 120
           DHVKEEI++YMSKKK+IKEQRNLIVDIDV+DY +EDEDEGS++VNN+AT  G SLKKPRQ
Sbjct: 61  DHVKEEIRDYMSKKKEIKEQRNLIVDIDVQDYGMEDEDEGSINVNNRATSSGSSLKKPRQ 120

Query: 121 KGPMDAFFTPNPETVVQNRK-DKGKQTSLNATYKKEMREHTIQRIARWFYDAGVPLNA-- 180
           KGPMDAFFTPNPE+VVQNRK DKGKQTSLNA YKKEMREHTIQRIARWFYDAGVPLNA  
Sbjct: 121 KGPMDAFFTPNPESVVQNRKNDKGKQTSLNAAYKKEMREHTIQRIARWFYDAGVPLNACT 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 YDSFAPMIESIGQFGPGLKPPTYHELRVPCLKKELEATNELMSSHKAEWAMVGCTVMADG 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 WTDRRNRTLINFLVNSPKGTMFIESIDASSYVKDGKKMFELLDNFVERIGEANVVQVVTD 300

Query: 301 ------------------------------------------------------------ 305
                                                                       
Sbjct: 301 SASANVMAGRLLEAKRPQLIWSPCAAHCLDLMLEDIYKISNIRKALKRGMEISNFIYVRP 360

[Close]

BLAST of Cucsat.G4305.T10 vs. ExPASy TrEMBL
Match: A0A5A7SPX6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold845G00360 PE=4 SV=1)

HSP 1 Score: 414 bits (1063), Expect = 1.51e-136
Identity = 273/635 (42.99%), Postives = 286/635 (45.04%), Query Frame = 0


Query: 1   MADESSRKDPAWKYGQLQNDQNINTFVCGFCSKVTKGGVYRMKQHLVGGYRNVTACTKCP 60
           MADESS+KDPAWKYG+LQNDQ+INTFV GFCSKVTKGGVYR+KQHLVGGYRNVTAC KC 
Sbjct: 1   MADESSKKDPAWKYGRLQNDQDINTFVYGFCSKVTKGGVYRLKQHLVGGYRNVTACRKCS 60

Query: 61  DHVKEEIKEYMSKKKDIKEQRNLIVDIDVEDYDIEDEDEGSVSVNNKATPRGPSLKKPRQ 120
           DHVKEEIK+YMSKKK IKEQRNLIVDIDV+DY IEDEDEGS+SVNN+AT  G SLKKPRQ
Sbjct: 61  DHVKEEIKDYMSKKKQIKEQRNLIVDIDVQDYGIEDEDEGSISVNNRATSSGSSLKKPRQ 120

Query: 121 KGPMDAFFTPNPETVVQNRK-DKGKQTSLNATYKKEMREHTIQRIARWFYDAGVPLNA-- 180
           KGPMDAFFTPNPETVVQNRK DKGKQTSLNA YKKEMREHTIQRIARWFYDA V LNA  
Sbjct: 121 KGPMDAFFTPNPETVVQNRKNDKGKQTSLNAAYKKEMREHTIQRIARWFYDAEVSLNACT 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 YDSFIPMIESIGKFGPGLKPPTYHELRVSCLKKKLEATNELMRSHKAEWAKVGCTVMANG 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 WTNRRNRTLINFLVNSPKGTMFIESIDASSYVKDGKKMFELLDNFVERIGEANVVQVVTD 300

Query: 301 ------------------------------------------------------------ 305
                                                                       
Sbjct: 301 SASTNVMAGRLIEAKRPQLIWSPCAAHCIDLMLEDIYKISNIRKALKRGMEISNFIYVRP 360

[Close]

BLAST of Cucsat.G4305.T10 vs. TAIR 10
Match: AT5G33406.1 (hAT dimerisation domain-containing protein / transposase-related )

HSP 1 Score: 183.0 bits (463), Expect = 3.7e-46
Identity = 86/176 (48.86%), Postives = 118/176 (67.05%), Query Frame = 0


Query: 132 PETVVQNRKDKGKQTSLNA-TYKKEMREHTIQRI-ARWFYDAGVPLNAAGYYLNPSFYYS 191
           P   +    D+ K+T + + TYK+E  +   + I  RW      PL+AAGYYLNP F+Y 
Sbjct: 96  PMGYIYGAMDQAKETIMKSFTYKEENYKMAFEIIDRRWDIQLHRPLHAAGYYLNPEFHYG 155

Query: 192 NPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKRAEALFGQPLAIRQRDKISPV 251
            P+    +E++ G   C+ ++V  +E QDKI+ EL  +K+A  LFG P+AIR R K+SP 
Sbjct: 156 QPDDIGYEEVLGGFLGCLGRLVPKIETQDKIITELDAFKKATGLFGIPMAIRLRTKMSPA 215

Query: 252 EWWDNFGQSTPNLQKFAVRILGLTCSASGCERNWSVFEQLHSKKRNRLAQSRLNDL 306
           EWW  +G STPNLQ FA+++L LTCSA+GCERNW VF+ LH+K+RNRL Q RLND+
Sbjct: 216 EWWSAYGSSTPNLQNFAIKVLSLTCSATGCERNWGVFQLLHTKRRNRLTQCRLNDM 271

[Close]

BLAST of Cucsat.G4305.T10 vs. TAIR 10
Match: AT4G15020.1 (hAT transposon superfamily )

HSP 1 Score: 122.1 bits (305), Expect = 7.8e-28
Identity = 61/140 (43.57%), Postives = 87/140 (62.14%), Query Frame = 0


Query: 167 WFYDAGVPLNAAGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSK 226
           W     +PL AAG++LNP  +Y N N +   E++  +  CI ++V   ++QDKI+ EL+ 
Sbjct: 528 WEQQQHIPLLAAGFFLNPKLFY-NTNEEIRSELILSVLDCIERLVPDDKIQDKIIKELTS 587

Query: 227 YKRAEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSAS-GCERNWSV 286
           YK A  +FG+ LAIR RD + P EWW  +G+S  NL +FA+RIL  TCS+S  C RN   
Sbjct: 588 YKTAGGVFGRNLAIRARDTMLPAEWWSTYGESCLNLSRFAIRILSQTCSSSVSCRRNQIP 647

Query: 287 FEQLHSKKRNRLAQSRLNDL 306
            E ++  K N + Q RL+DL
Sbjct: 648 VEHIYQSK-NSIEQKRLSDL 665

[Close]

BLAST of Cucsat.G4305.T10 vs. TAIR 10
Match: AT4G15020.2 (hAT transposon superfamily )

HSP 1 Score: 122.1 bits (305), Expect = 7.8e-28
Identity = 61/140 (43.57%), Postives = 87/140 (62.14%), Query Frame = 0


Query: 167 WFYDAGVPLNAAGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSK 226
           W     +PL AAG++LNP  +Y N N +   E++  +  CI ++V   ++QDKI+ EL+ 
Sbjct: 528 WEQQQHIPLLAAGFFLNPKLFY-NTNEEIRSELILSVLDCIERLVPDDKIQDKIIKELTS 587

Query: 227 YKRAEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSAS-GCERNWSV 286
           YK A  +FG+ LAIR RD + P EWW  +G+S  NL +FA+RIL  TCS+S  C RN   
Sbjct: 588 YKTAGGVFGRNLAIRARDTMLPAEWWSTYGESCLNLSRFAIRILSQTCSSSVSCRRNQIP 647

Query: 287 FEQLHSKKRNRLAQSRLNDL 306
            E ++  K N + Q RL+DL
Sbjct: 648 VEHIYQSK-NSIEQKRLSDL 665

[Close]

BLAST of Cucsat.G4305.T10 vs. TAIR 10
Match: AT3G22220.1 (hAT transposon superfamily )

HSP 1 Score: 119.4 bits (298), Expect = 5.0e-27
Identity = 64/145 (44.14%), Postives = 90/145 (62.07%), Query Frame = 0


Query: 164 IARWFYDAGVPLNAAGYYLNPSFYYSNPNIQED--DEIVNGLYSCITKMVASLEVQDKIL 223
           I RW+     PL AAG+YLNP F+YS   I E+   EI   +  CI K+V  + +QD ++
Sbjct: 521 IDRWWLQQ--PLYAAGFYLNPKFFYS---IDEEMRSEIHLAVVDCIEKLVPDVNIQDIVI 580

Query: 224 AELSKYKRAEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSAS-GCE 283
            +++ YK A  +FG+ LAIR RD + P EWW  +G+S  NL +FA+RIL  TCS+S G  
Sbjct: 581 KDINSYKNAVGIFGRNLAIRARDTMLPAEWWSTYGESCLNLSRFAIRILSQTCSSSIGSV 640

Query: 284 RNWSVFEQLHSKKRNRLAQSRLNDL 306
           RN +   Q++  K N + + RLNDL
Sbjct: 641 RNLTSISQIYESK-NSIERQRLNDL 659

[Close]

BLAST of Cucsat.G4305.T10 vs. TAIR 10
Match: AT3G22220.2 (hAT transposon superfamily )

HSP 1 Score: 119.4 bits (298), Expect = 5.0e-27
Identity = 64/145 (44.14%), Postives = 90/145 (62.07%), Query Frame = 0


Query: 164 IARWFYDAGVPLNAAGYYLNPSFYYSNPNIQED--DEIVNGLYSCITKMVASLEVQDKIL 223
           I RW+     PL AAG+YLNP F+YS   I E+   EI   +  CI K+V  + +QD ++
Sbjct: 521 IDRWWLQQ--PLYAAGFYLNPKFFYS---IDEEMRSEIHLAVVDCIEKLVPDVNIQDIVI 580

Query: 224 AELSKYKRAEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSAS-GCE 283
            +++ YK A  +FG+ LAIR RD + P EWW  +G+S  NL +FA+RIL  TCS+S G  
Sbjct: 581 KDINSYKNAVGIFGRNLAIRARDTMLPAEWWSTYGESCLNLSRFAIRILSQTCSSSIGSV 640

Query: 284 RNWSVFEQLHSKKRNRLAQSRLNDL 306
           RN +   Q++  K N + + RLNDL
Sbjct: 641 RNLTSISQIYESK-NSIERQRLNDL 659

The following BLAST results are available for this feature:

BLAST of Cucsat.G4305.T10 vs.


Match Name	E-value	Identity	Description

BLAST of Cucsat.G4305.T10 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031741477.1	2.86e-163	47.79	uncharacterized protein LOC105435633 [Cucumis sativus]	[more]
KAA0047882.1	2.61e-161	50.72	hypothetical protein E6C27_scaffold133G001550 [Cucumis melo var. makuwa]	[more]
XP_031745317.1	5.61e-152	43.08	uncharacterized protein LOC116405444 [Cucumis sativus]	[more]
KAA0062061.1	1.73e-148	44.25	hypothetical protein E6C27_scaffold89G004030 [Cucumis melo var. makuwa]	[more]
KAA0041802.1	2.44e-148	44.09	hypothetical protein E6C27_scaffold67G001750 [Cucumis melo var. makuwa] >KAA0048...	[more]

BLAST of Cucsat.G4305.T10 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TWK3	1.27e-161	50.72	BED-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]
A0A5A7V8P5	8.36e-149	44.25	BED-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]
A0A5A7TY62	1.18e-148	44.09	BED-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]
A0A5A7VJR4	3.34e-148	43.94	BED-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]
A0A5A7SPX6	1.51e-136	42.99	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of Cucsat.G4305.T10 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G33406.1	3.7e-46	48.86	hAT dimerisation domain-containing protein / transposase-related	[more]
AT4G15020.1	7.8e-28	43.57	hAT transposon superfamily	[more]
AT4G15020.2	7.8e-28	43.57	hAT transposon superfamily	[more]
AT3G22220.1	5.0e-27	44.14	hAT transposon superfamily	[more]
AT3G22220.2	5.0e-27	44.14	hAT transposon superfamily	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008906	HAT, C-terminal dimerisation domain	PFAM	PF05699	Dimer_Tnp_hAT	coord: 229..304 e-value: 1.5E-11 score: 43.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 96..124
None	No IPR available	PANTHER	PTHR32166	OSJNBA0013A04.12 PROTEIN	coord: 4..171
None	No IPR available	PANTHER	PTHR32166:SF88	HAT TRANSPOSON SUPERFAMILY	coord: 165..305
None	No IPR available	PANTHER	PTHR32166:SF88	HAT TRANSPOSON SUPERFAMILY	coord: 4..171
None	No IPR available	PANTHER	PTHR32166	OSJNBA0013A04.12 PROTEIN	coord: 165..305
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 150..305

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G4305	Cucsat.G4305	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G4305.T10.E1	Cucsat.G4305.T10.E1	exon
Cucsat.G4305.T10.E2	Cucsat.G4305.T10.E2	exon
Cucsat.G4305.T10.E3	Cucsat.G4305.T10.E3	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G4305.T10.C1	Cucsat.G4305.T10.C1	CDS
Cucsat.G4305.T10.C2	Cucsat.G4305.T10.C2	CDS
Cucsat.G4305.T10.C3	Cucsat.G4305.T10.C3	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G4305.T10	Cucsat.G4305.T10-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034247	snoRNA splicing
cellular_component	GO:0000932	P-body
cellular_component	GO:0005684	U2-type spliceosomal complex
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding