Cucsat.G241 (gene) Cucumber (B10) v3

Overview
NameCucsat.G241
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionBile acid:sodium symporter
Locationctg1: 5379138 .. 5380885 (-)
RNA-Seq ExpressionCucsat.G241
SyntenyCucsat.G241
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AATATGCAATGAATTTGTTTAACTAATTGTCCAAAGCCTTCATGTGATAGAAAACGAATGAACTCAAAGATTACAAAAAATGTTGTTAGAAAAATTATCAAATTCCAACCTCTTGCTTTGGACCAATATTTCTACCAATTTGTTGATAGCGATCTCTTGCTTCCTAATAATCTCCCAACACAATCTTGTCGTTTCACAAAATACAACCCGTGTTTGTATGCATCACTTCACCCAATTTCTATCATCTCCTTCAATTCTCCTTCTTTTCTTCACTAATCGGAGCCACAGAATTCTGCACAATGCCTCCGATTTCTCTGCAACTCACCCCCTTCATTTCTCCACTAATCCACCGCCCTAATCTCCGCCTTCACCGACCCCCAATTCCCCCTCTCTCGCCGCCCAGATTACTCACCGTCCGATCGGTTCAACAAAATAACGAACTCCCATCTCCCTCGCCACCGCCAAAACCCACTGGTTTGGACGATTTTCTTTCCACGGCGGCTAGTCTCTACCCTCTCTATGTGACGGCAGGCGGGATTGTTGCTTGCCTCGAACCCTCGACCTTCTCGTGGTTTGTGCAGAGAGGGCCGAGTTCCTATAGCTTATCTCTTGGTTTGATAATGTTGGCCATGGGGCTTACTCTAGAGATCAAGGATTTATTTAATTTGTTCATGCAAAGACCTCTTTCGGTGAGTTTTTGGAATCTGAATTTGTTTACATTGTGTGTATTTTGGTTATTGATTTGATTTGATGGGATGGAACCGGGGGTTTGTGGTAATGCTTGATGGTTTTGACTCTGTTGCTTTGTTTTAGATATTGTTTGGATGTGTAGCTCAGTACACGATTATGCCAGCTTCTGCAGTGCTGATCGGAAAACTTTTGGGACTTTCCCAGTCCCTTTTGTTCGGTTTGGTCTTGCTTGGATGTTGTCCTGGAGGATCTGCTTCCAATGTGGTAATAATGCCTATGATCTCTGTTTTCTTATTTGTTCTGTTTAATTTCTTATAACTTTTGTTTCTCTCCTAAAAACGGCAAAAAAAAAAAAAAAAAAGAGTAGAGAGTGAAGAGCCGCAACCTACTAGGAAATAAAATAATGTTCAAAAGATAATCCTGTATTTTAAAATTTAGAATTCAAAATCTCGATACAATACAAACATAAAAATGTTTTTTCAGAATATGTTCTTCTTGGATCACATAATTCAAGAACAGTGTTAAAAAAAATGTTGAACTTAGTAAATCTAAAAACATAAAACAAAATTCAGATGGTCAATAAAAAACTTAAAAAGAACAAAAACGGTAAGAAACTAATACCGGACATCATAGTCGCAAAGATAGAAATAGGATTGTATTGTTCTTAATTAATGAAAATTCTTCCCAGAAGATGATGCTTATAAATGTTCTAAAAGTTTATTCAAAGAAATTATACACGAATGTTGGACTAAGAATATATAGCTCAGTTTTGTTGTTGCTGTTGTTATTACAGTTGAAATTGATGATTAATCATCTTGATATTTGACTGCTAATTAATTTATTTATTGCATCTTTGTACTCGATTTGAGAGATGGATGATTCTTGACAGAGTTTTCATCCATAAGGCTGAGTAACACATTTCTGTGTTCAAAGTAGTCGTCTTAGTCAAGCATTATGGAAAACTTTATGAATGCAATCATCAACAATTGAACTACATTTCCTACTTTACAGCCTTGATCACAATAAGTTGATTGATTAAGTTTTCCGTTCACGGTTACTTCAATGAAATAGTATTTCAGGTAACCTTAATTGCTCAAGGCGACGTTCCTTTGTCTATTGTAATGACAGTATGCACAACTTTAGGAGCCGTAATTTTCACTCCCTTTCTGACAAAGTTTCTAGTAGGAGCTTATATTCCAGTCGACGCTGCACAGCTTTCTCTCAGCACCCTTCAGGTAAAGTTATGTCCACATTTGCCGTCCGGCCATAGTCATGTTCTTAAGTCATCGCCATCGTCTTCTTTTTTGGTTAGGTGGTGGTAGCTCCTATCCTCTTAGGTTCTTGCTTGCAAAAGGCATTTCCTTCCCTGGTGAAATTGGTGTTACCATTTGCACCACTTGTTGCTGTTTTAACTTCCTCGCTGCTTGCTAGCAGGTCTCGGTTCTTCAACAATTGTTTTTTTTTTTTTTTTTTGGCTTCAATAAGTTGTGCTTACCATGGAAACTTGATGAAAAGCCTTTTATTGTTTTTCGCTCTCACACACCTTTGATTATTTTTTTTTTATGATTAGTGTCTTCTCAGAGAATGTCATTCGTATCAAATCGTCAATGGTTAGTGCCACATTGGCCTCTGATGCATCTCTATGGACAGTCCTTAAAAGTATATTATCAGGAGAGCTGGGAGTAGTAATACTTTCGGTGTTTTGTTTACACTTTGCTGGTTTCTTCGTCGGGTAAGTTGCATCTCTTTCCTCACCTCAATGGACTTAGTTGCTCGAATGCAGAAGCTAAACAAATTGTTTACAATATAAATCATTTGAGATGTTACTGAAAGTAATGAACCAAAATGAATACTTAGTCACTGATGAACTGCATAAGATGGATGAAATTTTGCGTTTCCTCCCAAAACAGAATCTTCTCTATGTTGTAGATACTGATTCTTGTTTGCAAGGAGAATATGAAGTCAAATATTGTTATAAAAGATGAAATCAGTCGATTAGCTCACTACACACCCTTACGAGCTTCCTCTGATTTGCAGGTATATAGCAGCTGCTATCTGTGGGTTTCGAGAACGAGAACGAAGAACTATATCCATGCAGGTACAAAACGACATTCACTTATCGAGAAATTGAAAAACATAGATATATGAATGAGAGGGTGTGGATTTTGGCTTCAGGTTGGGATGCAGAATTCATCACTGGGAGTTGTTTTGGCAGCCTCACATTTTAGTTCAGCAATGGTGGCATTGCCTCCAGCAATTTCAGCTGTGATAATGAACATGATGGGGAGCACTCTTGGATTTTGTTGGAAATATATTCAACCTTCTGATGAAGTGAAAACCAGTGTTGTTGCCAAGTGAATTTCTTGTCCTTTTTTTCTTTGTATTTAATTTTACATCTTATTTCCAAATGTAAAAAGAATGTACTTTTAATCTTTAAATTCACTATAGAATCTCCATGCCAATTTCTTCACATCTTATTGTCGTACTTAATAGTCTTTTATGATCAACTTCTGCAGAAGGAACA

Coding sequence (CDS)

ATGCCTCCGATTTCTCTGCAACTCACCCCCTTCATTTCTCCACTAATCCACCGCCCTAATCTCCGCCTTCACCGACCCCCAATTCCCCCTCTCTCGCCGCCCAGATTACTCACCGTCCGATCGGTTCAACAAAATAACGAACTCCCATCTCCCTCGCCACCGCCAAAACCCACTGGTTTGGACGATTTTCTTTCCACGGCGGCTAGTCTCTACCCTCTCTATGTGACGGCAGGCGGGATTGTTGCTTGCCTCGAACCCTCGACCTTCTCGTGGTTTGTGCAGAGAGGGCCGAGTTCCTATAGCTTATCTCTTGGTTTGATAATGTTGGCCATGGGGCTTACTCTAGAGATCAAGGATTTATTTAATTTGTTCATGCAAAGACCTCTTTCGATATTGTTTGGATGTGTAGCTCAGTACACGATTATGCCAGCTTCTGCAGTGCTGATCGGAAAACTTTTGGGACTTTCCCAGTCCCTTTTGTTCGGTTTGGTCTTGCTTGGATGTTGTCCTGGAGGATCTGCTTCCAATGTGGTAACCTTAATTGCTCAAGGCGACGTTCCTTTGTCTATTGTAATGACAGTATGCACAACTTTAGGAGCCGTAATTTTCACTCCCTTTCTGACAAAGTTTCTAGTAGGAGCTTATATTCCAGTCGACGCTGCACAGCTTTCTCTCAGCACCCTTCAGGTGGTGGTAGCTCCTATCCTCTTAGGTTCTTGCTTGCAAAAGGCATTTCCTTCCCTGGTGAAATTGGTGTTACCATTTGCACCACTTGTTGCTGTTTTAACTTCCTCGCTGCTTGCTAGCAGTGTCTTCTCAGAGAATGTCATTCGTATCAAATCGTCAATGGTTAGTGCCACATTGGCCTCTGATGCATCTCTATGGACAGTCCTTAAAAGTATATTATCAGGAGAGCTGGGAGTAGTAATACTTTCGGTGTTTTGTTTACACTTTGCTGGTTTCTTCGTCGGGTATATAGCAGCTGCTATCTGTGGGTTTCGAGAACGAGAACGAAGAACTATATCCATGCAGGTTGGGATGCAGAATTCATCACTGGGAGTTGTTTTGGCAGCCTCACATTTTAGTTCAGCAATGGTGGCATTGCCTCCAGCAATTTCAGCTGTGATAATGAACATGATGGGGAGCACTCTTGGATTTTGTTGGAAATATATTCAACCTTCTGATGAAGTGAAAACCAGTGTTGTTGCCAAGTGA

Protein sequence

MPPISLQLTPFISPLIHRPNLRLHRPPIPPLSPPRLLTVRSVQQNNELPSPSPPPKPTGLDDFLSTAASLYPLYVTAGGIVACLEPSTFSWFVQRGPSSYSLSLGLIMLAMGLTLEIKDLFNLFMQRPLSILFGCVAQYTIMPASAVLIGKLLGLSQSLLFGLVLLGCCPGGSASNVVTLIAQGDVPLSIVMTVCTTLGAVIFTPFLTKFLVGAYIPVDAAQLSLSTLQVVVAPILLGSCLQKAFPSLVKLVLPFAPLVAVLTSSLLASSVFSENVIRIKSSMVSATLASDASLWTVLKSILSGELGVVILSVFCLHFAGFFVGYIAAAICGFRERERRTISMQVGMQNSSLGVVLAASHFSSAMVALPPAISAVIMNMMGSTLGFCWKYIQPSDEVKTSVVAK
Homology
BLAST of Cucsat.G241 vs. ExPASy Swiss-Prot
Match: Q7XVB3 (Probable sodium/metabolite cotransporter BASS1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=BASS1 PE=2 SV=2)

HSP 1 Score: 79.7 bits (195), Expect = 2.5e-14
Identity = 45/97 (46.39%), Postives = 64/97 (65.98%), Query Frame = 0

Query: 18  SILSGELGVVILSVFCLHFAGFFVGYIAAAICGFRERERRTISMQVGMQNSSLGVVLAAS 77
           +ILS  L VV +SV  LH +GFF GY+ +   G      RTIS++VGMQNS LGVVLA+ 
Sbjct: 309 AILSSGLQVV-MSVCWLHASGFFFGYVLSRTIGIDISSSRTISIEVGMQNSVLGVVLASK 368

Query: 78  HFSSAMVALPPAISAVIMNMMGSTLGFCWKYIQPSDE 115
           HF + + A+P A+S+V  ++ GS L   W+ + P+D+
Sbjct: 369 HFGNPLTAVPCAVSSVCHSVYGSLLAGIWRSLPPNDK 404

BLAST of Cucsat.G241 vs. ExPASy Swiss-Prot
Match: Q93YR2 (Probable sodium/metabolite cotransporter BASS1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BASS1 PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 3.0e-12
Identity = 38/85 (44.71%), Postives = 54/85 (63.53%), Query Frame = 0

Query: 27  VILSVFCLHFAGFFVGYIAAAICGFRERERRTISMQVGMQNSSLGVVLAASHFSSAMVAL 86
           V+L+   LH +GF  GY+ + I G      RTIS++VGMQNS LGVVLA  HF + + A+
Sbjct: 312 VVLASCLLHISGFLFGYLFSRILGIDVASSRTISIEVGMQNSVLGVVLATQHFGNPLTAV 371

Query: 87  PPAISAVIMNMMGSTLGFCWKYIQP 112
           P A+S+V  +++GS L   W+   P
Sbjct: 372 PCAVSSVCHSILGSVLAGIWRRSAP 396

BLAST of Cucsat.G241 vs. ExPASy Swiss-Prot
Match: Q5VRB2 (Probable sodium/metabolite cotransporter BASS2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=BASS2 PE=2 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.5e-11
Identity = 37/92 (40.22%), Postives = 57/92 (61.96%), Query Frame = 0

Query: 16  LKSILSGELGVVILSVFCLHFAGFFVGYIAAAICGFRERERRTISMQVGMQNSSLGVVLA 75
           +  +L  + G +I+ V  LH A F +GY  + +  F E   RTIS++ GMQ+S+LG +LA
Sbjct: 314 VSEVLKAQGGQLIIPVALLHVAAFALGYWLSKVSSFGESTSRTISIECGMQSSALGFLLA 373

Query: 76  ASHFSSAMVALPPAISAVIMNMMGSTLGFCWK 108
             HF++ +VA+P A+S V M + GS L   W+
Sbjct: 374 QKHFTNPLVAVPSAVSVVCMALGGSALAVFWR 405

BLAST of Cucsat.G241 vs. ExPASy Swiss-Prot
Match: Q1EBV7 (Sodium/pyruvate cotransporter BASS2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BASS2 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.4e-09
Identity = 39/97 (40.21%), Postives = 59/97 (60.82%), Query Frame = 0

Query: 19  ILSGELGVVILSVFCLHFAGFFVGYIAAAICGFRERERRTISMQVGMQNSSLGVVLAASH 78
           +L  +   +IL V  LH A F +GY  +    F E   RTIS++ GMQ+S+LG +LA  H
Sbjct: 308 VLKTQGAQLILPVALLHAAAFAIGYWISKF-SFGESTSRTISIECGMQSSALGFLLAQKH 367

Query: 79  FSSAMVALPPAISAVIMNMMGSTLGFCWKYIQ-PSDE 115
           F++ +VA+P A+S V M + GS L   W+ +  P+D+
Sbjct: 368 FTNPLVAVPSAVSVVCMALGGSGLAVFWRNLPIPADD 403

BLAST of Cucsat.G241 vs. ExPASy Swiss-Prot
Match: Q8VYY4 (Probable sodium/metabolite cotransporter BASS6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BASS6 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 3.9e-07
Identity = 34/96 (35.42%), Postives = 51/96 (53.12%), Query Frame = 0

Query: 16  LKSILSGELGVVILSVFCLHFAGFFVGYIAAAICGFR-----ERERRTISMQVGMQNSSL 75
           + S++S     ++L V   H + F  GY       FR     +  +RT+S + GMQ+S L
Sbjct: 307 INSVMSPFGATILLLVTMFHLSAFLAGYFLTGSV-FRNAPDAKAMQRTLSYETGMQSSLL 366

Query: 76  GVVLAASHFSSAMVALPPAISAVIMNMMGSTLGFCW 107
            + LA   F   +V +PPAIS V+M++MG TL   W
Sbjct: 367 ALALATKFFQDPLVGIPPAISTVVMSLMGFTLVLIW 401

BLAST of Cucsat.G241 vs. NCBI nr
Match: XP_004133714.1 (probable sodium/metabolite cotransporter BASS1, chloroplastic [Cucumis sativus] >KGN56248.1 hypothetical protein Csa_010831 [Cucumis sativus])

HSP 1 Score: 232 bits (592), Expect = 7.50e-73
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0

Query: 1   MVSATLASDASLWTVLKSILSGELGVVILSVFCLHFAGFFVGYIAAAICGFRERERRTIS 60
           MVSATLASDASLWTVLKSILSGELGVVILSVFCLHFAGFFVGYIAAAICGFRERERRTIS
Sbjct: 283 MVSATLASDASLWTVLKSILSGELGVVILSVFCLHFAGFFVGYIAAAICGFRERERRTIS 342

Query: 61  MQVGMQNSSLGVVLAASHFSSAMVALPPAISAVIMNMMGSTLGFCWKYIQPSDEVKTSVV 120
           MQVGMQNSSLGVVLAASHFSSAMVALPPAISAVIMNMMGSTLGFCWKYIQPSDEVKTSVV
Sbjct: 343 MQVGMQNSSLGVVLAASHFSSAMVALPPAISAVIMNMMGSTLGFCWKYIQPSDEVKTSVV 402

Query: 121 AK 122
           AK
Sbjct: 403 AK 404

BLAST of Cucsat.G241 vs. NCBI nr
Match: XP_008452255.1 (PREDICTED: probable sodium/metabolite cotransporter BASS1, chloroplastic [Cucumis melo] >KAA0060620.1 putative sodium/metabolite cotransporter BASS1 [Cucumis melo var. makuwa] >TYK02252.1 putative sodium/metabolite cotransporter BASS1 [Cucumis melo var. makuwa])

HSP 1 Score: 224 bits (571), Expect = 1.06e-69
Identity = 117/121 (96.69%), Postives = 120/121 (99.17%), Query Frame = 0

Query: 1   MVSATLASDASLWTVLKSILSGELGVVILSVFCLHFAGFFVGYIAAAICGFRERERRTIS 60
           MVSATLASDASLWTVL+SILSGELGVVILSVFCLHFAGFFVGYIAAAICGF+ERERRTIS
Sbjct: 283 MVSATLASDASLWTVLQSILSGELGVVILSVFCLHFAGFFVGYIAAAICGFQERERRTIS 342

Query: 61  MQVGMQNSSLGVVLAASHFSSAMVALPPAISAVIMNMMGSTLGFCWKYIQPSDEVKTSVV 120
           MQVGMQNSSLGVVLA SHFSSAMVALPPAISAVIMN+MGSTLGFCWKYIQPSDEVKTSVV
Sbjct: 343 MQVGMQNSSLGVVLATSHFSSAMVALPPAISAVIMNIMGSTLGFCWKYIQPSDEVKTSVV 402

BLAST of Cucsat.G241 vs. NCBI nr
Match: XP_038903139.1 (probable sodium/metabolite cotransporter BASS1, chloroplastic [Benincasa hispida])

HSP 1 Score: 206 bits (525), Expect = 9.88e-63
Identity = 107/122 (87.70%), Postives = 115/122 (94.26%), Query Frame = 0

Query: 1   MVSATLASDASLWTVLKSILSGELGVVILSVFCLHFAGFFVGYIAAAICGFRERERRTIS 60
           MV ATLASDASLWTVL+SILSGELGVVILSVFCLHFAGFFVGYI AAI GFRERERR IS
Sbjct: 287 MVIATLASDASLWTVLQSILSGELGVVILSVFCLHFAGFFVGYITAAIGGFRERERRAIS 346

Query: 61  MQVGMQNSSLGVVLAASHFSSAMVALPPAISAVIMNMMGSTLGFCWKYIQPSDEVKTSVV 120
           ++VGMQNSSLGV+LA SHFSSAMVALPPA+SAVIMN+MGSTLGFCW+YI+PSDEVKTS  
Sbjct: 347 IEVGMQNSSLGVILATSHFSSAMVALPPAMSAVIMNIMGSTLGFCWRYIEPSDEVKTSAN 406

Query: 121 AK 122
           AK
Sbjct: 407 AK 408

BLAST of Cucsat.G241 vs. NCBI nr
Match: XP_022985149.1 (probable sodium/metabolite cotransporter BASS2, chloroplastic [Cucurbita maxima])

HSP 1 Score: 184 bits (466), Expect = 6.86e-54
Identity = 94/119 (78.99%), Postives = 111/119 (93.28%), Query Frame = 0

Query: 1   MVSATLASDASLWTVLKSILSGELGVVILSVFCLHFAGFFVGYIAAAICGFRERERRTIS 60
           MV+A+LASDAS W +++SILSGELG+V+LSVFCLHFAGFFVGY+AA+I GFRERERR IS
Sbjct: 286 MVNASLASDASPWMIIRSILSGELGMVVLSVFCLHFAGFFVGYVAASIGGFRERERRAIS 345

Query: 61  MQVGMQNSSLGVVLAASHFSSAMVALPPAISAVIMNMMGSTLGFCWKYIQPS-DEVKTS 118
           ++VGMQNSSLGVVLA+SHFSSAMVALP A+SAVIMN+MGSTLG CW+YI+PS DEV+ S
Sbjct: 346 IEVGMQNSSLGVVLASSHFSSAMVALPAAMSAVIMNIMGSTLGLCWRYIEPSADEVEAS 404

BLAST of Cucsat.G241 vs. NCBI nr
Match: XP_022136954.1 (probable sodium/metabolite cotransporter BASS1, chloroplastic isoform X2 [Momordica charantia])

HSP 1 Score: 183 bits (465), Expect = 8.21e-54
Identity = 97/121 (80.17%), Postives = 108/121 (89.26%), Query Frame = 0

Query: 1   MVSATLASDASLWTVLKSILSGELGVVILSVFCLHFAGFFVGYIAAAICGFRERERRTIS 60
           MVSATLASDAS W VLK+I+SGELGVVILSVF LHFAGFFVGYIAA I G+RERERR IS
Sbjct: 278 MVSATLASDASPWIVLKNIISGELGVVILSVFLLHFAGFFVGYIAATIGGYRERERRAIS 337

Query: 61  MQVGMQNSSLGVVLAASHFSSAMVALPPAISAVIMNMMGSTLGFCWKYIQPSDEVKTSVV 120
           ++VGMQNSSLGVVLA SHFSS MVALPPA+SAVIMN+MGS+LGF W+ IQPSD+ +TS  
Sbjct: 338 IEVGMQNSSLGVVLATSHFSSTMVALPPAMSAVIMNIMGSSLGFFWRLIQPSDKEETSAA 397

BLAST of Cucsat.G241 vs. ExPASy TrEMBL
Match: A0A0A0L3A1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G106000 PE=3 SV=1)

HSP 1 Score: 232 bits (592), Expect = 3.63e-73
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0

Query: 1   MVSATLASDASLWTVLKSILSGELGVVILSVFCLHFAGFFVGYIAAAICGFRERERRTIS 60
           MVSATLASDASLWTVLKSILSGELGVVILSVFCLHFAGFFVGYIAAAICGFRERERRTIS
Sbjct: 283 MVSATLASDASLWTVLKSILSGELGVVILSVFCLHFAGFFVGYIAAAICGFRERERRTIS 342

Query: 61  MQVGMQNSSLGVVLAASHFSSAMVALPPAISAVIMNMMGSTLGFCWKYIQPSDEVKTSVV 120
           MQVGMQNSSLGVVLAASHFSSAMVALPPAISAVIMNMMGSTLGFCWKYIQPSDEVKTSVV
Sbjct: 343 MQVGMQNSSLGVVLAASHFSSAMVALPPAISAVIMNMMGSTLGFCWKYIQPSDEVKTSVV 402

Query: 121 AK 122
           AK
Sbjct: 403 AK 404

BLAST of Cucsat.G241 vs. ExPASy TrEMBL
Match: A0A5D3BTX1 (Putative sodium/metabolite cotransporter BASS1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18G00520 PE=3 SV=1)

HSP 1 Score: 224 bits (571), Expect = 5.13e-70
Identity = 117/121 (96.69%), Postives = 120/121 (99.17%), Query Frame = 0

Query: 1   MVSATLASDASLWTVLKSILSGELGVVILSVFCLHFAGFFVGYIAAAICGFRERERRTIS 60
           MVSATLASDASLWTVL+SILSGELGVVILSVFCLHFAGFFVGYIAAAICGF+ERERRTIS
Sbjct: 283 MVSATLASDASLWTVLQSILSGELGVVILSVFCLHFAGFFVGYIAAAICGFQERERRTIS 342

Query: 61  MQVGMQNSSLGVVLAASHFSSAMVALPPAISAVIMNMMGSTLGFCWKYIQPSDEVKTSVV 120
           MQVGMQNSSLGVVLA SHFSSAMVALPPAISAVIMN+MGSTLGFCWKYIQPSDEVKTSVV
Sbjct: 343 MQVGMQNSSLGVVLATSHFSSAMVALPPAISAVIMNIMGSTLGFCWKYIQPSDEVKTSVV 402

BLAST of Cucsat.G241 vs. ExPASy TrEMBL
Match: A0A1S3BSU0 (probable sodium/metabolite cotransporter BASS1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103493327 PE=3 SV=1)

HSP 1 Score: 224 bits (571), Expect = 5.13e-70
Identity = 117/121 (96.69%), Postives = 120/121 (99.17%), Query Frame = 0

Query: 1   MVSATLASDASLWTVLKSILSGELGVVILSVFCLHFAGFFVGYIAAAICGFRERERRTIS 60
           MVSATLASDASLWTVL+SILSGELGVVILSVFCLHFAGFFVGYIAAAICGF+ERERRTIS
Sbjct: 283 MVSATLASDASLWTVLQSILSGELGVVILSVFCLHFAGFFVGYIAAAICGFQERERRTIS 342

Query: 61  MQVGMQNSSLGVVLAASHFSSAMVALPPAISAVIMNMMGSTLGFCWKYIQPSDEVKTSVV 120
           MQVGMQNSSLGVVLA SHFSSAMVALPPAISAVIMN+MGSTLGFCWKYIQPSDEVKTSVV
Sbjct: 343 MQVGMQNSSLGVVLATSHFSSAMVALPPAISAVIMNIMGSTLGFCWKYIQPSDEVKTSVV 402

BLAST of Cucsat.G241 vs. ExPASy TrEMBL
Match: A0A6J1JCH6 (probable sodium/metabolite cotransporter BASS2, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111483238 PE=3 SV=1)

HSP 1 Score: 184 bits (466), Expect = 3.32e-54
Identity = 94/119 (78.99%), Postives = 111/119 (93.28%), Query Frame = 0

Query: 1   MVSATLASDASLWTVLKSILSGELGVVILSVFCLHFAGFFVGYIAAAICGFRERERRTIS 60
           MV+A+LASDAS W +++SILSGELG+V+LSVFCLHFAGFFVGY+AA+I GFRERERR IS
Sbjct: 286 MVNASLASDASPWMIIRSILSGELGMVVLSVFCLHFAGFFVGYVAASIGGFRERERRAIS 345

Query: 61  MQVGMQNSSLGVVLAASHFSSAMVALPPAISAVIMNMMGSTLGFCWKYIQPS-DEVKTS 118
           ++VGMQNSSLGVVLA+SHFSSAMVALP A+SAVIMN+MGSTLG CW+YI+PS DEV+ S
Sbjct: 346 IEVGMQNSSLGVVLASSHFSSAMVALPAAMSAVIMNIMGSTLGLCWRYIEPSADEVEAS 404

BLAST of Cucsat.G241 vs. ExPASy TrEMBL
Match: A0A6J1C5S7 (probable sodium/metabolite cotransporter BASS1, chloroplastic isoform X2 OS=Momordica charantia OX=3673 GN=LOC111008522 PE=3 SV=1)

HSP 1 Score: 183 bits (465), Expect = 3.97e-54
Identity = 97/121 (80.17%), Postives = 108/121 (89.26%), Query Frame = 0

Query: 1   MVSATLASDASLWTVLKSILSGELGVVILSVFCLHFAGFFVGYIAAAICGFRERERRTIS 60
           MVSATLASDAS W VLK+I+SGELGVVILSVF LHFAGFFVGYIAA I G+RERERR IS
Sbjct: 278 MVSATLASDASPWIVLKNIISGELGVVILSVFLLHFAGFFVGYIAATIGGYRERERRAIS 337

Query: 61  MQVGMQNSSLGVVLAASHFSSAMVALPPAISAVIMNMMGSTLGFCWKYIQPSDEVKTSVV 120
           ++VGMQNSSLGVVLA SHFSS MVALPPA+SAVIMN+MGS+LGF W+ IQPSD+ +TS  
Sbjct: 338 IEVGMQNSSLGVVLATSHFSSTMVALPPAMSAVIMNIMGSSLGFFWRLIQPSDKEETSAA 397

BLAST of Cucsat.G241 vs. TAIR 10
Match: AT1G78560.1 (Sodium Bile acid symporter family )

HSP 1 Score: 72.8 bits (177), Expect = 2.2e-13
Identity = 38/85 (44.71%), Postives = 54/85 (63.53%), Query Frame = 0

Query: 27  VILSVFCLHFAGFFVGYIAAAICGFRERERRTISMQVGMQNSSLGVVLAASHFSSAMVAL 86
           V+L+   LH +GF  GY+ + I G      RTIS++VGMQNS LGVVLA  HF + + A+
Sbjct: 312 VVLASCLLHISGFLFGYLFSRILGIDVASSRTISIEVGMQNSVLGVVLATQHFGNPLTAV 371

Query: 87  PPAISAVIMNMMGSTLGFCWKYIQP 112
           P A+S+V  +++GS L   W+   P
Sbjct: 372 PCAVSSVCHSILGSVLAGIWRRSAP 396

BLAST of Cucsat.G241 vs. TAIR 10
Match: AT2G26900.1 (Sodium Bile acid symporter family )

HSP 1 Score: 63.9 bits (154), Expect = 1.0e-10
Identity = 39/97 (40.21%), Postives = 59/97 (60.82%), Query Frame = 0

Query: 19  ILSGELGVVILSVFCLHFAGFFVGYIAAAICGFRERERRTISMQVGMQNSSLGVVLAASH 78
           +L  +   +IL V  LH A F +GY  +    F E   RTIS++ GMQ+S+LG +LA  H
Sbjct: 308 VLKTQGAQLILPVALLHAAAFAIGYWISKF-SFGESTSRTISIECGMQSSALGFLLAQKH 367

Query: 79  FSSAMVALPPAISAVIMNMMGSTLGFCWKYIQ-PSDE 115
           F++ +VA+P A+S V M + GS L   W+ +  P+D+
Sbjct: 368 FTNPLVAVPSAVSVVCMALGGSGLAVFWRNLPIPADD 403

BLAST of Cucsat.G241 vs. TAIR 10
Match: AT4G22840.1 (Sodium Bile acid symporter family )

HSP 1 Score: 55.8 bits (133), Expect = 2.7e-08
Identity = 34/96 (35.42%), Postives = 51/96 (53.12%), Query Frame = 0

Query: 16  LKSILSGELGVVILSVFCLHFAGFFVGYIAAAICGFR-----ERERRTISMQVGMQNSSL 75
           + S++S     ++L V   H + F  GY       FR     +  +RT+S + GMQ+S L
Sbjct: 307 INSVMSPFGATILLLVTMFHLSAFLAGYFLTGSV-FRNAPDAKAMQRTLSYETGMQSSLL 366

Query: 76  GVVLAASHFSSAMVALPPAISAVIMNMMGSTLGFCW 107
            + LA   F   +V +PPAIS V+M++MG TL   W
Sbjct: 367 ALALATKFFQDPLVGIPPAISTVVMSLMGFTLVLIW 401

BLAST of Cucsat.G241 vs. TAIR 10
Match: AT4G12030.2 (bile acid transporter 5 )

HSP 1 Score: 54.7 bits (130), Expect = 6.1e-08
Identity = 34/96 (35.42%), Postives = 49/96 (51.04%), Query Frame = 0

Query: 16  LKSILSGELGVVILSVFCLHFAGFFVGYIAAAICGFRERE----RRTISMQVGMQNSSLG 75
           + SILS     ++  V   H   F  GY        +  +    +RTIS + GMQ+S L 
Sbjct: 308 IDSILSPFGATILFLVITFHLLAFVAGYFFTGFFFSKAPDVKALQRTISYETGMQSSLLA 367

Query: 76  VVLAASHFSSAMVALPPAISAVIMNMMGSTLGFCWK 108
           + LA   F   +V +PPAIS V+M++MG +L   WK
Sbjct: 368 LALATKFFQDPLVGVPPAISTVVMSLMGVSLVTIWK 403

BLAST of Cucsat.G241 vs. TAIR 10
Match: AT4G12030.1 (bile acid transporter 5 )

HSP 1 Score: 54.7 bits (130), Expect = 6.1e-08
Identity = 34/96 (35.42%), Postives = 49/96 (51.04%), Query Frame = 0

Query: 16  LKSILSGELGVVILSVFCLHFAGFFVGYIAAAICGFRERE----RRTISMQVGMQNSSLG 75
           + SILS     ++  V   H   F  GY        +  +    +RTIS + GMQ+S L 
Sbjct: 174 IDSILSPFGATILFLVITFHLLAFVAGYFFTGFFFSKAPDVKALQRTISYETGMQSSLLA 233

Query: 76  VVLAASHFSSAMVALPPAISAVIMNMMGSTLGFCWK 108
           + LA   F   +V +PPAIS V+M++MG +L   WK
Sbjct: 234 LALATKFFQDPLVGVPPAISTVVMSLMGVSLVTIWK 269

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q7XVB32.5e-1446.39Probable sodium/metabolite cotransporter BASS1, chloroplastic OS=Oryza sativa su... [more]
Q93YR23.0e-1244.71Probable sodium/metabolite cotransporter BASS1, chloroplastic OS=Arabidopsis tha... [more]
Q5VRB21.5e-1140.22Probable sodium/metabolite cotransporter BASS2, chloroplastic OS=Oryza sativa su... [more]
Q1EBV71.4e-0940.21Sodium/pyruvate cotransporter BASS2, chloroplastic OS=Arabidopsis thaliana OX=37... [more]
Q8VYY43.9e-0735.42Probable sodium/metabolite cotransporter BASS6, chloroplastic OS=Arabidopsis tha... [more]
Match NameE-valueIdentityDescription
XP_004133714.17.50e-73100.00probable sodium/metabolite cotransporter BASS1, chloroplastic [Cucumis sativus] ... [more]
XP_008452255.11.06e-6996.69PREDICTED: probable sodium/metabolite cotransporter BASS1, chloroplastic [Cucumi... [more]
XP_038903139.19.88e-6387.70probable sodium/metabolite cotransporter BASS1, chloroplastic [Benincasa hispida... [more]
XP_022985149.16.86e-5478.99probable sodium/metabolite cotransporter BASS2, chloroplastic [Cucurbita maxima][more]
XP_022136954.18.21e-5480.17probable sodium/metabolite cotransporter BASS1, chloroplastic isoform X2 [Momord... [more]
Match NameE-valueIdentityDescription
A0A0A0L3A13.63e-73100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G106000 PE=3 SV=1[more]
A0A5D3BTX15.13e-7096.69Putative sodium/metabolite cotransporter BASS1 OS=Cucumis melo var. makuwa OX=11... [more]
A0A1S3BSU05.13e-7096.69probable sodium/metabolite cotransporter BASS1, chloroplastic OS=Cucumis melo OX... [more]
A0A6J1JCH63.32e-5478.99probable sodium/metabolite cotransporter BASS2, chloroplastic OS=Cucurbita maxim... [more]
A0A6J1C5S73.97e-5480.17probable sodium/metabolite cotransporter BASS1, chloroplastic isoform X2 OS=Momo... [more]
Match NameE-valueIdentityDescription
AT1G78560.12.2e-1344.71Sodium Bile acid symporter family [more]
AT2G26900.11.0e-1040.21Sodium Bile acid symporter family [more]
AT4G22840.12.7e-0835.42Sodium Bile acid symporter family [more]
AT4G12030.26.1e-0835.42bile acid transporter 5 [more]
AT4G12030.16.1e-0835.42bile acid transporter 5 [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038770Sodium/solute symporter superfamilyGENE3D1.20.1530.20coord: 3..123
e-value: 9.2E-25
score: 89.3
IPR004710Bile acid:sodium symporterPANTHERPTHR10361SODIUM-BILE ACID COTRANSPORTERcoord: 3..128
NoneNo IPR availablePANTHERPTHR10361:SF58SODIUM/METABOLITE COTRANSPORTER BASS2, CHLOROPLASTIC-RELATEDcoord: 3..128

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G241.T1Cucsat.G241.T1mRNA
Cucsat.G241.T2Cucsat.G241.T2mRNA
Cucsat.G241.T6Cucsat.G241.T6mRNA
Cucsat.G241.T17Cucsat.G241.T17mRNA
Cucsat.G241.T11Cucsat.G241.T11mRNA
Cucsat.G241.T3Cucsat.G241.T3mRNA
Cucsat.G241.T7Cucsat.G241.T7mRNA
Cucsat.G241.T9Cucsat.G241.T9mRNA
Cucsat.G241.T8Cucsat.G241.T8mRNA
Cucsat.G241.T20Cucsat.G241.T20mRNA
Cucsat.G241.T18Cucsat.G241.T18mRNA
Cucsat.G241.T15Cucsat.G241.T15mRNA
Cucsat.G241.T14Cucsat.G241.T14mRNA
Cucsat.G241.T16Cucsat.G241.T16mRNA
Cucsat.G241.T5Cucsat.G241.T5mRNA
Cucsat.G241.T4Cucsat.G241.T4mRNA
Cucsat.G241.T19Cucsat.G241.T19mRNA
Cucsat.G241.T13Cucsat.G241.T13mRNA
Cucsat.G241.T21Cucsat.G241.T21mRNA
Cucsat.G241.T10Cucsat.G241.T10mRNA
Cucsat.G241.T22Cucsat.G241.T22mRNA
Cucsat.G241.T12Cucsat.G241.T12mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane