Cucsat.G19921 (gene) Cucumber (B10) v3

Overview
NameCucsat.G19921
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionZinc finger matrin-type protein 2
Locationctg4: 3264209 .. 3267607 (+)
RNA-Seq ExpressionCucsat.G19921
SyntenyCucsat.G19921
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AGTAATCAAAACTAAAACTAAAAACTATATTAACGAAAAGTTATCTAAACCCTTTTTTGGGAGAACCAAATTCAAGCAAAAGAAAAGGGAAAAAAAGAACGAGAAAATCAGGGTCGAACCACTGCCGTCGCACTAGTGAAATTGCAGGGACCAAAAGGGAAACTGAAAACGCCGCCGGTAGCCGACCGGCGATTGGGGGCGTTGCGAGAATCGAACTCACGACCTCTCGCACCCGAAGCGAGAATCATACCACTAGACCAAACGCCCTGTGTGTCCTATCACCTTATTTCTCTACCTTAACATGTGATTTCACGCTTTCATCACCTTCTCTCATTTGCTGTTCTGTTTTCGAATCAATTCATGTTACTTTCTTATCTTTCTTATTGGATTCTTTCTGGGATTTGTTTTTTTCAGAAGAATCCCATCTGAGTTTCGGTAGTTAGGTCAAGGTTTTTTTGGGCAGCGATGGCTCATACCAGCAATACTGTAAGTTATAGTCTCGTCTTTCGTTTTAAACCCTAACTTACTGATATTCTATTCACGCAGATTCCTCTGAGAAAAATAATTAAGAATGATCATTAATCTTTGTTTTTTTTTTTTTTTTGGATTTTGGTGAGGTTTGTACTTGGAAGTAATTTGGTCGATTTCTTGTATGTAGGCAGCTGGAGTTGATAACACCTTTAGAAGGAAATTTGATCGGGAGGAGTATTTGGAACGAGCTCGTGACCGTGAAAAACAGGTTGGGGCTTTTGGAAATTCTCGTTTTCATCGTCATCTTAATGCTTATTCTTTATGAGTGTTCCTCAAATGTTTCAAATTTTGCTGATTGTGACGTCTTTTATCTGTATTTCAGGAGGTTGATAGGGTTAAGTCGAAATGTAAGTGTTTCTTTTCTTCAAGTTCTTGTTGAGCAATTGCTTGTGTTCACGTGTAGCTATAGAAACTAGATTATGTAGATTTGGGTTCAGAAGGATTTAATTTGCCAACTTTCTTCAGTGAAAGGTCCACCAGTGCAAAGAAAACCATTGAAACATAGAGATTACGAGGTAGATCTTGAGTCCCGATTGGGAAAGACCCAGGTTAGTCAGGCCATTTCTCTTTCCCCGTCTTGAATTTATGTGTATTTTAGCCATTTTAATGTTGAAACTGTATTTGCACTTCTCTTCTGTATTTCTCTGGTGAAGTTAAGGCTGTCTTGAGTTGCTAATTGTTCATTTTTTCATTAACTTTCAAAATCTTTAGCATGTTAACTTTTAGGTTGTCAGATTTTCACCTGTGGCCTCTGGATGGATGCTCCTGTAGATTCAAGCTCTCTGTGGCATTATTTTTTGACATATAAGACTTATTTATTATTTCCTGTACCGCACGTAGTGAACCAGCATGTTAGATTTCCCCTGCAAGGCATTTTTATGATGATGGGGAAATACTATTATGTATATTCACTTTATAGTTTGTCTTACAGCTAATAGTGATGGAAAATACATATAAAAGGTTATATCCATTAGGCCTGTCTTGATGAACTCATATATGAATTGGGGAATCACACTTGATTAAAGGCAATCGACTATCACCTCATTATGAACAATATTTTCTTTGTACGTCTTGCACGTGTCAATATAATTTTCTCAATCTTAGGTTTCAGTTGATGTGCTTAATGTCTTATGATTCTGACCTGTTTCATTCTTTTTTGATCTTTAATTCATCTTGTACAGGTTGTCACTCCAGTTGCACCTCTAAGCCAGCAGGTATCACATTTGACCATCTTTTCTCTTAGAATTACTGGAATTAAATCTTGAATAACAATTGAGTAATTCCAAATTTAACAGTGTGTAACTTATTGACTTGAGAAGAAAAACTGGAGGATAAATGAGAGGCTTTGCATGTATGGTTTTGGTTAATGTGCTCTTGAATTGAGTGTCCCCCATTTGGTGCTTTGCGATGAAATATAAATTGCACTTGATCTCATATTGCTTATTTTCTTCTTTATATCAATGAATTATTTTTCAGGCTGGATATTACTGTTCTGTTTGTGAATGTGTCGTCAAGGATTCTGCAAATTACTTGGATCACATCAATGGAAAGAAACGTATGTTATCCCTTTTTCTAGATCTTTAGCCAATTAAGTGGGTGAATATTCAGGTTTTGTATTTTCTTTACCTTCTTTTCTATTGACTCTGTGTTGTAGATCAGAGGGCCTTGGGTATGTCCATGCGGGTAGAGCGGGCATCTCTCGAACAGGTACCACCCTAAATAGTCAGAAAAATGAAACTATTTCTCATCTCTATTATTGTAAATGCTCGTGAAATCTCAGTGTTCAAGAGACTGAATAGCTTTATATGAAATAGGTGCAAGAGCGGTTTGAAGTTCTTAAAAAGAGAAAAACACCAGGAAGCTTCACAGAGCAAGGTAAAGCTTAAGAATTCAGAGTTAGTTTTAATGAGGGGAAAAAGATAGGATTTCCCTCCCAATACTAGTTTCATTGATGAATGGCACTAGGACACCATGCTTTTAACTGCAAAAATATACTAGCGTTGGCTATTATCACTATTCTGTGTTTCATGTTTTAGAATTATGTTTCTCTTTTTTAATGATGCTATCTTCCGTTTTTCCTTAGATCTTGAAGAGCGTATACTAAAGCAGCAACAAGAAGAAGAACAACGAAAGCGCGAGCGTCGAGAAAGGAAGAAAGAAAAGAAGGTTAGTACTATAATAACCTCACGATTTTGGCAACAATTTCTATCATGAAAAGTGGGGATCACATCTTACACTTGTGTTTATTCTCCTGGAATGTAGAAAGAGAAGGCTGCAGAAGAGGAACCTGAAGTAGATCCCGATGTTGCAGCAATGATGGGATTTGGAGGCTTCCGTTCATCCAAGAAGTGACAATTATACAGGTTCATCTTTTACGACCTTAATTAAACAAGATATGTTCCGTAGGTTGTACAACTGTGTGCTTGAGTTCTAAAAAGATTACAGGTTCATCTTCTTCAACTCGAAGCTTGAGCTTTGCTCTTGTGATCCATGTGGAGTTGCTATAATTTGAACTGATGTGCATGGGAAGACGAACTTGGGCTTCCCAGCTTCTTGGACTTGTAAGCTGTATCTTTTAAAGATAATCTGGCCTTTTTCTGTAACATTAAATTAATATGTTATTAGTATACAATGTTTCTTGATGTCTGGAGATGAAGTTTGTTGCTGAGGCAGATTTTAGATGAACCTAATCCAAAAAATGAGAAAGAATATATTAGGTTTTTCAAATATTGGCTGTGAACACCCCTGTGAGGTGCAAAAAGTGAGTGATGTTAAATAATGAGATTTGGGGTATTAAAAGTTAGCCTAACTCAATGGTACATGTCCCCTTCAAATTCATTTGATTTAATCATGGAATACTCAATTTTA

Coding sequence (CDS)

ATGAACAATATTTTCTTTGTTGTCACTCCAGTTGCACCTCTAAGCCAGCAGGCTGGATATTACTGTTCTGTTTGTGAATGTGTCGTCAAGGATTCTGCAAATTACTTGGATCACATCAATGGAAAGAAACATCAGAGGGCCTTGGGTATGTCCATGCGGGTAGAGCGGGCATCTCTCGAACAGGTGCAAGAGCGGTTTGAAGTTCTTAAAAAGAGAAAAACACCAGGAAGCTTCACAGAGCAAGATCTTGAAGAGCGTATACTAAAGCAGCAACAAGAAGAAGAACAACGAAAGCGCGAGCGTCGAGAAAGGAAGAAAGAAAAGAAGAAAGAGAAGGCTGCAGAAGAGGAACCTGAAGTAGATCCCGATGTTGCAGCAATGATGGGATTTGGAGGCTTCCGTTCATCCAAGAAGTGA

Protein sequence

MNNIFFVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERFEVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAAMMGFGGFRSSKK
Homology
[Close]
BLAST of Cucsat.G19921 vs. ExPASy Swiss-Prot
Match: Q96NC0 (Zinc finger matrin-type protein 2 OS=Homo sapiens OX=9606 GN=ZMAT2 PE=1 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 7.6e-28
Identity = 71/132 (53.79%), Postives = 98/132 (74.24%), Query Frame = 0 

Query: 7   VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF 66
           V+T   P S+  GYYC+VC+CVVKDS N+LDHINGKKHQR LGMSMRVER++L+QV++RF
Sbjct: 67  VITKTTPQSEMGGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSTLDQVKKRF 126

Query: 67  EVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAA 126
           EV  K+K      + D EER+ + ++EEE+ K  ++E++KEKK+    +   E D ++AA
Sbjct: 127 EV-NKKKMEEKQKDYDFEERMKELREEEEKAKAYKKEKQKEKKRRAEEDLTFEEDDEMAA 186

Query: 127 MMGFGGFRSSKK 139
           +MGF GF S+KK
Sbjct: 187 VMGFSGFGSTKK 197

[Close]
BLAST of Cucsat.G19921 vs. ExPASy Swiss-Prot
Match: Q9CPW7 (Zinc finger matrin-type protein 2 OS=Mus musculus OX=10090 GN=Zmat2 PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 7.6e-28
Identity = 71/132 (53.79%), Postives = 98/132 (74.24%), Query Frame = 0 

Query: 7   VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF 66
           V+T   P S+  GYYC+VC+CVVKDS N+LDHINGKKHQR LGMSMRVER++L+QV++RF
Sbjct: 67  VITKTTPQSEMGGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSTLDQVKKRF 126

Query: 67  EVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAA 126
           EV  K+K      + D EER+ + ++EEE+ K  ++E++KEKK+    +   E D ++AA
Sbjct: 127 EV-NKKKMEEKQKDYDFEERMKELREEEEKAKAYKKEKQKEKKRRAEEDLTFEEDDEMAA 186

Query: 127 MMGFGGFRSSKK 139
           +MGF GF S+KK
Sbjct: 187 VMGFSGFGSTKK 197

[Close]
BLAST of Cucsat.G19921 vs. ExPASy Swiss-Prot
Match: P34670 (Putative zinc finger matrin-type protein snu-23 OS=Caenorhabditis elegans OX=6239 GN=snu-23 PE=3 SV=2)

HSP 1 Score: 101.3 bits (251), Expect = 9.1e-21
Identity = 59/143 (41.26%), Postives = 96/143 (67.13%), Query Frame = 0 

Query: 7   VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF 66
           V+T   P ++  G+YC VC+CVVKDS N+LDHINGK HQR +GMSM+ +++++  V+ERF
Sbjct: 77  VITKATPSAETGGFYCDVCDCVVKDSINFLDHINGKNHQRNIGMSMKTKKSTVADVRERF 136

Query: 67  EVLKKRKTPGSFTEQDLEERILKQQQEEEQR--------KRERRERKKEKKKEKAAEEEP 126
           +++K +K       Q   E++L+  QEEE R        K + R+RK++ +K++  +++ 
Sbjct: 137 KLMKDKKEREKKEAQ--VEQLLEDVQEEEARMADFKKDKKTDNRKRKRDTRKDEEEDDDE 196

Query: 127 E---VDPDVAAMMGFGGFRSSKK 139
           +   +DP++ AMMGF GF +SK+
Sbjct: 197 DDSGLDPEIRAMMGFSGFSTSKR 217

[Close]
BLAST of Cucsat.G19921 vs. NCBI nr
Match: XP_011648855.1 (zinc finger matrin-type protein 2 [Cucumis sativus] >XP_011648858.1 zinc finger matrin-type protein 2 [Cucumis sativus] >XP_031737170.1 zinc finger matrin-type protein 2 [Cucumis sativus] >KGN60986.1 hypothetical protein Csa_021129 [Cucumis sativus])

HSP 1 Score: 240 bits (613), Expect = 1.94e-78
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 7   VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF 66
           VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF
Sbjct: 71  VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF 130

Query: 67  EVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAA 126
           EVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAA
Sbjct: 131 EVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAA 190

Query: 127 MMGFGGFRSSKK 138
           MMGFGGFRSSKK
Sbjct: 191 MMGFGGFRSSKK 202

[Close]
BLAST of Cucsat.G19921 vs. NCBI nr
Match: XP_008453709.1 (PREDICTED: zinc finger matrin-type protein 2 [Cucumis melo] >XP_008453717.1 PREDICTED: zinc finger matrin-type protein 2 [Cucumis melo] >XP_008453724.1 PREDICTED: zinc finger matrin-type protein 2 [Cucumis melo] >XP_038889474.1 zinc finger matrin-type protein 2 [Benincasa hispida] >XP_038889475.1 zinc finger matrin-type protein 2 [Benincasa hispida] >XP_038889476.1 zinc finger matrin-type protein 2 [Benincasa hispida])

HSP 1 Score: 240 bits (613), Expect = 1.94e-78
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 7   VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF 66
           VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF
Sbjct: 71  VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF 130

Query: 67  EVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAA 126
           EVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAA
Sbjct: 131 EVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAA 190

Query: 127 MMGFGGFRSSKK 138
           MMGFGGFRSSKK
Sbjct: 191 MMGFGGFRSSKK 202

[Close]
BLAST of Cucsat.G19921 vs. NCBI nr
Match: KAA0048055.1 (zinc finger matrin-type protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 240 bits (613), Expect = 1.94e-78
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 7   VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF 66
           VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF
Sbjct: 71  VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF 130

Query: 67  EVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAA 126
           EVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAA
Sbjct: 131 EVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAA 190

Query: 127 MMGFGGFRSSKK 138
           MMGFGGFRSSKK
Sbjct: 191 MMGFGGFRSSKK 202

[Close]
BLAST of Cucsat.G19921 vs. NCBI nr
Match: TYJ96481.1 (zinc finger matrin-type protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 240 bits (613), Expect = 2.62e-78
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 7   VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF 66
           VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF
Sbjct: 80  VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF 139

Query: 67  EVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAA 126
           EVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAA
Sbjct: 140 EVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAA 199

Query: 127 MMGFGGFRSSKK 138
           MMGFGGFRSSKK
Sbjct: 200 MMGFGGFRSSKK 211

[Close]
BLAST of Cucsat.G19921 vs. NCBI nr
Match: XP_023536719.1 (zinc finger matrin-type protein 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 238 bits (608), Expect = 1.12e-77
Identity = 130/132 (98.48%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 7   VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF 66
           VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF
Sbjct: 71  VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF 130

Query: 67  EVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAA 126
           EVLKKRKTPGSFTEQDLEERI+KQQ+EEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAA
Sbjct: 131 EVLKKRKTPGSFTEQDLEERIIKQQEEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAA 190

Query: 127 MMGFGGFRSSKK 138
           MMGFGGFRSSKK
Sbjct: 191 MMGFGGFRSSKK 202

[Close]
BLAST of Cucsat.G19921 vs. ExPASy TrEMBL
Match: A0A1S3BWZ9 (zinc finger matrin-type protein 2 OS=Cucumis melo OX=3656 GN=LOC103494358 PE=4 SV=1)

HSP 1 Score: 240 bits (613), Expect = 9.40e-79
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 7   VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF 66
           VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF
Sbjct: 71  VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF 130

Query: 67  EVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAA 126
           EVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAA
Sbjct: 131 EVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAA 190

Query: 127 MMGFGGFRSSKK 138
           MMGFGGFRSSKK
Sbjct: 191 MMGFGGFRSSKK 202

[Close]
BLAST of Cucsat.G19921 vs. ExPASy TrEMBL
Match: A0A5A7U309 (Zinc finger matrin-type protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G001240 PE=4 SV=1)

HSP 1 Score: 240 bits (613), Expect = 9.40e-79
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 7   VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF 66
           VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF
Sbjct: 71  VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF 130

Query: 67  EVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAA 126
           EVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAA
Sbjct: 131 EVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAA 190

Query: 127 MMGFGGFRSSKK 138
           MMGFGGFRSSKK
Sbjct: 191 MMGFGGFRSSKK 202

[Close]
BLAST of Cucsat.G19921 vs. ExPASy TrEMBL
Match: A0A0A0LM02 (U1-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G033890 PE=4 SV=1)

HSP 1 Score: 240 bits (613), Expect = 9.40e-79
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 7   VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF 66
           VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF
Sbjct: 71  VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF 130

Query: 67  EVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAA 126
           EVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAA
Sbjct: 131 EVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAA 190

Query: 127 MMGFGGFRSSKK 138
           MMGFGGFRSSKK
Sbjct: 191 MMGFGGFRSSKK 202

[Close]
BLAST of Cucsat.G19921 vs. ExPASy TrEMBL
Match: A0A5D3BCY1 (Zinc finger matrin-type protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G001260 PE=4 SV=1)

HSP 1 Score: 240 bits (613), Expect = 1.27e-78
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 7   VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF 66
           VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF
Sbjct: 80  VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF 139

Query: 67  EVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAA 126
           EVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAA
Sbjct: 140 EVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAA 199

Query: 127 MMGFGGFRSSKK 138
           MMGFGGFRSSKK
Sbjct: 200 MMGFGGFRSSKK 211

[Close]
BLAST of Cucsat.G19921 vs. ExPASy TrEMBL
Match: A0A6J1HQF6 (zinc finger matrin-type protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111465669 PE=4 SV=1)

HSP 1 Score: 237 bits (605), Expect = 1.55e-77
Identity = 129/132 (97.73%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 7   VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF 66
           VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF
Sbjct: 71  VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF 130

Query: 67  EVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAA 126
           EVLKKRKTPGSFTEQDLEERI+KQQ+EEEQRKRERRERKKE+KKEKAAEEEPEVDPDVAA
Sbjct: 131 EVLKKRKTPGSFTEQDLEERIIKQQEEEEQRKRERRERKKERKKEKAAEEEPEVDPDVAA 190

Query: 127 MMGFGGFRSSKK 138
           MMGFGGFRSSKK
Sbjct: 191 MMGFGGFRSSKK 202

The following BLAST results are available for this feature:
BLAST of Cucsat.G19921 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q96NC07.6e-2853.79Zinc finger matrin-type protein 2 OS=Homo sapiens OX=9606 GN=ZMAT2 PE=1 SV=1[more]
Q9CPW77.6e-2853.79Zinc finger matrin-type protein 2 OS=Mus musculus OX=10090 GN=Zmat2 PE=2 SV=1[more]
P346709.1e-2141.26Putative zinc finger matrin-type protein snu-23 OS=Caenorhabditis elegans OX=623... [more]
BLAST of Cucsat.G19921 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011648855.11.94e-78100.00zinc finger matrin-type protein 2 [Cucumis sativus] >XP_011648858.1 zinc finger ... [more]
XP_008453709.11.94e-78100.00PREDICTED: zinc finger matrin-type protein 2 [Cucumis melo] >XP_008453717.1 PRED... [more]
KAA0048055.11.94e-78100.00zinc finger matrin-type protein 2 [Cucumis melo var. makuwa][more]
TYJ96481.12.62e-78100.00zinc finger matrin-type protein 2 [Cucumis melo var. makuwa][more]
XP_023536719.11.12e-7798.48zinc finger matrin-type protein 2 [Cucurbita pepo subsp. pepo][more]
BLAST of Cucsat.G19921 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BWZ99.40e-79100.00zinc finger matrin-type protein 2 OS=Cucumis melo OX=3656 GN=LOC103494358 PE=4 S... [more]
A0A5A7U3099.40e-79100.00Zinc finger matrin-type protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A0A0LM029.40e-79100.00U1-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G033890 PE=... [more]
A0A5D3BCY11.27e-78100.00Zinc finger matrin-type protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A6J1HQF61.55e-7797.73zinc finger matrin-type protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111465669 PE... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 14..56

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G19921.T12Cucsat.G19921.T12mRNA
Cucsat.G19921.T3Cucsat.G19921.T3mRNA
Cucsat.G19921.T1Cucsat.G19921.T1mRNA
Cucsat.G19921.T26Cucsat.G19921.T26mRNA
Cucsat.G19921.T2Cucsat.G19921.T2mRNA
Cucsat.G19921.T24Cucsat.G19921.T24mRNA
Cucsat.G19921.T27Cucsat.G19921.T27mRNA
Cucsat.G19921.T20Cucsat.G19921.T20mRNA
Cucsat.G19921.T6Cucsat.G19921.T6mRNA
Cucsat.G19921.T22Cucsat.G19921.T22mRNA
Cucsat.G19921.T21Cucsat.G19921.T21mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000398 mRNA splicing, via spliceosome
cellular_component GO:0005681 spliceosomal complex
cellular_component GO:0046540 U4/U6 x U5 tri-snRNP complex
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding