Cucsat.G19921.T12 (mRNA) Cucumber (B10) v3

Overview
NameCucsat.G19921.T12
TypemRNA
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionZinc finger matrin-type protein 2
Locationctg4: 3264209 .. 3267607 (+)
RNA-Seq ExpressionCucsat.G19921.T12
SyntenyCucsat.G19921.T12
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AGTAATCAAAACTAAAACTAAAAACTATATTAACGAAAAGTTATCTAAACCCTTTTTTGGGAGAACCAAATTCAAGCAAAAGAAAAGGGAAAAAAAGAACGAGAAAATCAGGGTCGAACCACTGCCGTCGCACTAGTGAAATTGCAGGGACCAAAAGGGAAACTGAAAACGCCGCCGGTAGCCGACCGGCGATTGGGGGCGTTGCGAGAATCGAACTCACGACCTCTCGCACCCGAAGCGAGAATCATACCACTAGACCAAACGCCCTGTGTGTCCTATCACCTTATTTCTCTACCTTAACATGTGATTTCACGCTTTCATCACCTTCTCTCATTTGCTGTTCTGTTTTCGAATCAATTCATGTTACTTTCTTATCTTTCTTATTGGATTCTTTCTGGGATTTGTTTTTTTCAGAAGAATCCCATCTGAGTTTCGGTAGTTAGGTCAAGGTTTTTTTGGGCAGCGATGGCTCATACCAGCAATACTGTAAGTTATAGTCTCGTCTTTCGTTTTAAACCCTAACTTACTGATATTCTATTCACGCAGATTCCTCTGAGAAAAATAATTAAGAATGATCATTAATCTTTGTTTTTTTTTTTTTTTTGGATTTTGGTGAGGTTTGTACTTGGAAGTAATTTGGTCGATTTCTTGTATGTAGGCAGCTGGAGTTGATAACACCTTTAGAAGGAAATTTGATCGGGAGGAGTATTTGGAACGAGCTCGTGACCGTGAAAAACAGGTTGGGGCTTTTGGAAATTCTCGTTTTCATCGTCATCTTAATGCTTATTCTTTATGAGTGTTCCTCAAATGTTTCAAATTTTGCTGATTGTGACGTCTTTTATCTGTATTTCAGGAGGTTGATAGGGTTAAGTCGAAATGTAAGTGTTTCTTTTCTTCAAGTTCTTGTTGAGCAATTGCTTGTGTTCACGTGTAGCTATAGAAACTAGATTATGTAGATTTGGGTTCAGAAGGATTTAATTTGCCAACTTTCTTCAGTGAAAGGTCCACCAGTGCAAAGAAAACCATTGAAACATAGAGATTACGAGGTAGATCTTGAGTCCCGATTGGGAAAGACCCAGGTTAGTCAGGCCATTTCTCTTTCCCCGTCTTGAATTTATGTGTATTTTAGCCATTTTAATGTTGAAACTGTATTTGCACTTCTCTTCTGTATTTCTCTGGTGAAGTTAAGGCTGTCTTGAGTTGCTAATTGTTCATTTTTTCATTAACTTTCAAAATCTTTAGCATGTTAACTTTTAGGTTGTCAGATTTTCACCTGTGGCCTCTGGATGGATGCTCCTGTAGATTCAAGCTCTCTGTGGCATTATTTTTTGACATATAAGACTTATTTATTATTTCCTGTACCGCACGTAGTGAACCAGCATGTTAGATTTCCCCTGCAAGGCATTTTTATGATGATGGGGAAATACTATTATGTATATTCACTTTATAGTTTGTCTTACAGCTAATAGTGATGGAAAATACATATAAAAGGTTATATCCATTAGGCCTGTCTTGATGAACTCATATATGAATTGGGGAATCACACTTGATTAAAGGCAATCGACTATCACCTCATTATGAACAATATTTTCTTTGTACGTCTTGCACGTGTCAATATAATTTTCTCAATCTTAGGTTTCAGTTGATGTGCTTAATGTCTTATGATTCTGACCTGTTTCATTCTTTTTTGATCTTTAATTCATCTTGTACAGGTTGTCACTCCAGTTGCACCTCTAAGCCAGCAGGTATCACATTTGACCATCTTTTCTCTTAGAATTACTGGAATTAAATCTTGAATAACAATTGAGTAATTCCAAATTTAACAGTGTGTAACTTATTGACTTGAGAAGAAAAACTGGAGGATAAATGAGAGGCTTTGCATGTATGGTTTTGGTTAATGTGCTCTTGAATTGAGTGTCCCCCATTTGGTGCTTTGCGATGAAATATAAATTGCACTTGATCTCATATTGCTTATTTTCTTCTTTATATCAATGAATTATTTTTCAGGCTGGATATTACTGTTCTGTTTGTGAATGTGTCGTCAAGGATTCTGCAAATTACTTGGATCACATCAATGGAAAGAAACGTATGTTATCCCTTTTTCTAGATCTTTAGCCAATTAAGTGGGTGAATATTCAGGTTTTGTATTTTCTTTACCTTCTTTTCTATTGACTCTGTGTTGTAGATCAGAGGGCCTTGGGTATGTCCATGCGGGTAGAGCGGGCATCTCTCGAACAGGTACCACCCTAAATAGTCAGAAAAATGAAACTATTTCTCATCTCTATTATTGTAAATGCTCGTGAAATCTCAGTGTTCAAGAGACTGAATAGCTTTATATGAAATAGGTGCAAGAGCGGTTTGAAGTTCTTAAAAAGAGAAAAACACCAGGAAGCTTCACAGAGCAAGGTAAAGCTTAAGAATTCAGAGTTAGTTTTAATGAGGGGAAAAAGATAGGATTTCCCTCCCAATACTAGTTTCATTGATGAATGGCACTAGGACACCATGCTTTTAACTGCAAAAATATACTAGCGTTGGCTATTATCACTATTCTGTGTTTCATGTTTTAGAATTATGTTTCTCTTTTTTAATGATGCTATCTTCCGTTTTTCCTTAGATCTTGAAGAGCGTATACTAAAGCAGCAACAAGAAGAAGAACAACGAAAGCGCGAGCGTCGAGAAAGGAAGAAAGAAAAGAAGGTTAGTACTATAATAACCTCACGATTTTGGCAACAATTTCTATCATGAAAAGTGGGGATCACATCTTACACTTGTGTTTATTCTCCTGGAATGTAGAAAGAGAAGGCTGCAGAAGAGGAACCTGAAGTAGATCCCGATGTTGCAGCAATGATGGGATTTGGAGGCTTCCGTTCATCCAAGAAGTGACAATTATACAGGTTCATCTTTTACGACCTTAATTAAACAAGATATGTTCCGTAGGTTGTACAACTGTGTGCTTGAGTTCTAAAAAGATTACAGGTTCATCTTCTTCAACTCGAAGCTTGAGCTTTGCTCTTGTGATCCATGTGGAGTTGCTATAATTTGAACTGATGTGCATGGGAAGACGAACTTGGGCTTCCCAGCTTCTTGGACTTGTAAGCTGTATCTTTTAAAGATAATCTGGCCTTTTTCTGTAACATTAAATTAATATGTTATTAGTATACAATGTTTCTTGATGTCTGGAGATGAAGTTTGTTGCTGAGGCAGATTTTAGATGAACCTAATCCAAAAAATGAGAAAGAATATATTAGGTTTTTCAAATATTGGCTGTGAACACCCCTGTGAGGTGCAAAAAGTGAGTGATGTTAAATAATGAGATTTGGGGTATTAAAAGTTAGCCTAACTCAATGGTACATGTCCCCTTCAAATTCATTTGATTTAATCATGGAATACTCAATTTTA

Coding sequence (CDS)

ATGAACAATATTTTCTTTGTTGTCACTCCAGTTGCACCTCTAAGCCAGCAGGCTGGATATTACTGTTCTGTTTGTGAATGTGTCGTCAAGGATTCTGCAAATTACTTGGATCACATCAATGGAAAGAAACATCAGAGGGCCTTGGGTATGTCCATGCGGGTAGAGCGGGCATCTCTCGAACAGGTGCAAGAGCGGTTTGAAGTTCTTAAAAAGAGAAAAACACCAGGAAGCTTCACAGAGCAAGATCTTGAAGAGCGTATACTAAAGCAGCAACAAGAAGAAGAACAACGAAAGCGCGAGCGTCGAGAAAGGAAGAAAGAAAAGAAGAAAGAGAAGGCTGCAGAAGAGGAACCTGAAGTAGATCCCGATGTTGCAGCAATGATGGGATTTGGAGGCTTCCGTTCATCCAAGAAGTGA

Protein sequence

MNNIFFVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERFEVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAAMMGFGGFRSSKK
Homology
[Close]
BLAST of Cucsat.G19921.T12 vs. ExPASy Swiss-Prot
Match: Q96NC0 (Zinc finger matrin-type protein 2 OS=Homo sapiens OX=9606 GN=ZMAT2 PE=1 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 7.6e-28
Identity = 71/132 (53.79%), Postives = 98/132 (74.24%), Query Frame = 0 

Query: 7   VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF 66
           V+T   P S+  GYYC+VC+CVVKDS N+LDHINGKKHQR LGMSMRVER++L+QV++RF
Sbjct: 67  VITKTTPQSEMGGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSTLDQVKKRF 126

Query: 67  EVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAA 126
           EV  K+K      + D EER+ + ++EEE+ K  ++E++KEKK+    +   E D ++AA
Sbjct: 127 EV-NKKKMEEKQKDYDFEERMKELREEEEKAKAYKKEKQKEKKRRAEEDLTFEEDDEMAA 186

Query: 127 MMGFGGFRSSKK 139
           +MGF GF S+KK
Sbjct: 187 VMGFSGFGSTKK 197

[Close]
BLAST of Cucsat.G19921.T12 vs. ExPASy Swiss-Prot
Match: Q9CPW7 (Zinc finger matrin-type protein 2 OS=Mus musculus OX=10090 GN=Zmat2 PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 7.6e-28
Identity = 71/132 (53.79%), Postives = 98/132 (74.24%), Query Frame = 0 

Query: 7   VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF 66
           V+T   P S+  GYYC+VC+CVVKDS N+LDHINGKKHQR LGMSMRVER++L+QV++RF
Sbjct: 67  VITKTTPQSEMGGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSTLDQVKKRF 126

Query: 67  EVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAA 126
           EV  K+K      + D EER+ + ++EEE+ K  ++E++KEKK+    +   E D ++AA
Sbjct: 127 EV-NKKKMEEKQKDYDFEERMKELREEEEKAKAYKKEKQKEKKRRAEEDLTFEEDDEMAA 186

Query: 127 MMGFGGFRSSKK 139
           +MGF GF S+KK
Sbjct: 187 VMGFSGFGSTKK 197

[Close]
BLAST of Cucsat.G19921.T12 vs. ExPASy Swiss-Prot
Match: P34670 (Putative zinc finger matrin-type protein snu-23 OS=Caenorhabditis elegans OX=6239 GN=snu-23 PE=3 SV=2)

HSP 1 Score: 101.3 bits (251), Expect = 9.1e-21
Identity = 59/143 (41.26%), Postives = 96/143 (67.13%), Query Frame = 0 

Query: 7   VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF 66
           V+T   P ++  G+YC VC+CVVKDS N+LDHINGK HQR +GMSM+ +++++  V+ERF
Sbjct: 77  VITKATPSAETGGFYCDVCDCVVKDSINFLDHINGKNHQRNIGMSMKTKKSTVADVRERF 136

Query: 67  EVLKKRKTPGSFTEQDLEERILKQQQEEEQR--------KRERRERKKEKKKEKAAEEEP 126
           +++K +K       Q   E++L+  QEEE R        K + R+RK++ +K++  +++ 
Sbjct: 137 KLMKDKKEREKKEAQ--VEQLLEDVQEEEARMADFKKDKKTDNRKRKRDTRKDEEEDDDE 196

Query: 127 E---VDPDVAAMMGFGGFRSSKK 139
           +   +DP++ AMMGF GF +SK+
Sbjct: 197 DDSGLDPEIRAMMGFSGFSTSKR 217

[Close]
BLAST of Cucsat.G19921.T12 vs. NCBI nr
Match: XP_011648855.1 (zinc finger matrin-type protein 2 [Cucumis sativus] >XP_011648858.1 zinc finger matrin-type protein 2 [Cucumis sativus] >XP_031737170.1 zinc finger matrin-type protein 2 [Cucumis sativus] >KGN60986.1 hypothetical protein Csa_021129 [Cucumis sativus])

HSP 1 Score: 240 bits (613), Expect = 1.94e-78
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 7   VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF 66
           VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF
Sbjct: 71  VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF 130

Query: 67  EVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAA 126
           EVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAA
Sbjct: 131 EVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAA 190

Query: 127 MMGFGGFRSSKK 138
           MMGFGGFRSSKK
Sbjct: 191 MMGFGGFRSSKK 202

[Close]
BLAST of Cucsat.G19921.T12 vs. NCBI nr
Match: XP_008453709.1 (PREDICTED: zinc finger matrin-type protein 2 [Cucumis melo] >XP_008453717.1 PREDICTED: zinc finger matrin-type protein 2 [Cucumis melo] >XP_008453724.1 PREDICTED: zinc finger matrin-type protein 2 [Cucumis melo] >XP_038889474.1 zinc finger matrin-type protein 2 [Benincasa hispida] >XP_038889475.1 zinc finger matrin-type protein 2 [Benincasa hispida] >XP_038889476.1 zinc finger matrin-type protein 2 [Benincasa hispida])

HSP 1 Score: 240 bits (613), Expect = 1.94e-78
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 7   VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF 66
           VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF
Sbjct: 71  VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF 130

Query: 67  EVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAA 126
           EVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAA
Sbjct: 131 EVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAA 190

Query: 127 MMGFGGFRSSKK 138
           MMGFGGFRSSKK
Sbjct: 191 MMGFGGFRSSKK 202

[Close]
BLAST of Cucsat.G19921.T12 vs. NCBI nr
Match: KAA0048055.1 (zinc finger matrin-type protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 240 bits (613), Expect = 1.94e-78
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 7   VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF 66
           VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF
Sbjct: 71  VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF 130

Query: 67  EVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAA 126
           EVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAA
Sbjct: 131 EVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAA 190

Query: 127 MMGFGGFRSSKK 138
           MMGFGGFRSSKK
Sbjct: 191 MMGFGGFRSSKK 202

[Close]
BLAST of Cucsat.G19921.T12 vs. NCBI nr
Match: TYJ96481.1 (zinc finger matrin-type protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 240 bits (613), Expect = 2.62e-78
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 7   VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF 66
           VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF
Sbjct: 80  VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF 139

Query: 67  EVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAA 126
           EVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAA
Sbjct: 140 EVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAA 199

Query: 127 MMGFGGFRSSKK 138
           MMGFGGFRSSKK
Sbjct: 200 MMGFGGFRSSKK 211

[Close]
BLAST of Cucsat.G19921.T12 vs. NCBI nr
Match: XP_023536719.1 (zinc finger matrin-type protein 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 238 bits (608), Expect = 1.12e-77
Identity = 130/132 (98.48%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 7   VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF 66
           VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF
Sbjct: 71  VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF 130

Query: 67  EVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAA 126
           EVLKKRKTPGSFTEQDLEERI+KQQ+EEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAA
Sbjct: 131 EVLKKRKTPGSFTEQDLEERIIKQQEEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAA 190

Query: 127 MMGFGGFRSSKK 138
           MMGFGGFRSSKK
Sbjct: 191 MMGFGGFRSSKK 202

[Close]
BLAST of Cucsat.G19921.T12 vs. ExPASy TrEMBL
Match: A0A1S3BWZ9 (zinc finger matrin-type protein 2 OS=Cucumis melo OX=3656 GN=LOC103494358 PE=4 SV=1)

HSP 1 Score: 240 bits (613), Expect = 9.40e-79
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 7   VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF 66
           VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF
Sbjct: 71  VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF 130

Query: 67  EVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAA 126
           EVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAA
Sbjct: 131 EVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAA 190

Query: 127 MMGFGGFRSSKK 138
           MMGFGGFRSSKK
Sbjct: 191 MMGFGGFRSSKK 202

[Close]
BLAST of Cucsat.G19921.T12 vs. ExPASy TrEMBL
Match: A0A5A7U309 (Zinc finger matrin-type protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G001240 PE=4 SV=1)

HSP 1 Score: 240 bits (613), Expect = 9.40e-79
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 7   VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF 66
           VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF
Sbjct: 71  VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF 130

Query: 67  EVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAA 126
           EVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAA
Sbjct: 131 EVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAA 190

Query: 127 MMGFGGFRSSKK 138
           MMGFGGFRSSKK
Sbjct: 191 MMGFGGFRSSKK 202

[Close]
BLAST of Cucsat.G19921.T12 vs. ExPASy TrEMBL
Match: A0A0A0LM02 (U1-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G033890 PE=4 SV=1)

HSP 1 Score: 240 bits (613), Expect = 9.40e-79
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 7   VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF 66
           VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF
Sbjct: 71  VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF 130

Query: 67  EVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAA 126
           EVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAA
Sbjct: 131 EVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAA 190

Query: 127 MMGFGGFRSSKK 138
           MMGFGGFRSSKK
Sbjct: 191 MMGFGGFRSSKK 202

[Close]
BLAST of Cucsat.G19921.T12 vs. ExPASy TrEMBL
Match: A0A5D3BCY1 (Zinc finger matrin-type protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G001260 PE=4 SV=1)

HSP 1 Score: 240 bits (613), Expect = 1.27e-78
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 7   VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF 66
           VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF
Sbjct: 80  VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF 139

Query: 67  EVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAA 126
           EVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAA
Sbjct: 140 EVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAA 199

Query: 127 MMGFGGFRSSKK 138
           MMGFGGFRSSKK
Sbjct: 200 MMGFGGFRSSKK 211

[Close]
BLAST of Cucsat.G19921.T12 vs. ExPASy TrEMBL
Match: A0A6J1HQF6 (zinc finger matrin-type protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111465669 PE=4 SV=1)

HSP 1 Score: 237 bits (605), Expect = 1.55e-77
Identity = 129/132 (97.73%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 7   VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF 66
           VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF
Sbjct: 71  VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF 130

Query: 67  EVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAA 126
           EVLKKRKTPGSFTEQDLEERI+KQQ+EEEQRKRERRERKKE+KKEKAAEEEPEVDPDVAA
Sbjct: 131 EVLKKRKTPGSFTEQDLEERIIKQQEEEEQRKRERRERKKERKKEKAAEEEPEVDPDVAA 190

Query: 127 MMGFGGFRSSKK 138
           MMGFGGFRSSKK
Sbjct: 191 MMGFGGFRSSKK 202

The following BLAST results are available for this feature:
BLAST of Cucsat.G19921.T12 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q96NC07.6e-2853.79Zinc finger matrin-type protein 2 OS=Homo sapiens OX=9606 GN=ZMAT2 PE=1 SV=1[more]
Q9CPW77.6e-2853.79Zinc finger matrin-type protein 2 OS=Mus musculus OX=10090 GN=Zmat2 PE=2 SV=1[more]
P346709.1e-2141.26Putative zinc finger matrin-type protein snu-23 OS=Caenorhabditis elegans OX=623... [more]
BLAST of Cucsat.G19921.T12 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011648855.11.94e-78100.00zinc finger matrin-type protein 2 [Cucumis sativus] >XP_011648858.1 zinc finger ... [more]
XP_008453709.11.94e-78100.00PREDICTED: zinc finger matrin-type protein 2 [Cucumis melo] >XP_008453717.1 PRED... [more]
KAA0048055.11.94e-78100.00zinc finger matrin-type protein 2 [Cucumis melo var. makuwa][more]
TYJ96481.12.62e-78100.00zinc finger matrin-type protein 2 [Cucumis melo var. makuwa][more]
XP_023536719.11.12e-7798.48zinc finger matrin-type protein 2 [Cucurbita pepo subsp. pepo][more]
BLAST of Cucsat.G19921.T12 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BWZ99.40e-79100.00zinc finger matrin-type protein 2 OS=Cucumis melo OX=3656 GN=LOC103494358 PE=4 S... [more]
A0A5A7U3099.40e-79100.00Zinc finger matrin-type protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A0A0LM029.40e-79100.00U1-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G033890 PE=... [more]
A0A5D3BCY11.27e-78100.00Zinc finger matrin-type protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A6J1HQF61.55e-7797.73zinc finger matrin-type protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111465669 PE... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 52..72
NoneNo IPR availableCOILSCoilCoilcoord: 80..117
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 14..52
e-value: 3.5E-7
score: 31.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 73..138
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 73..119
IPR003604Matrin/U1-C-like, C2H2-type zinc fingerSMARTSM00451ZnF_U1_5coord: 17..51
e-value: 2.0E-9
score: 47.3
IPR022755Zinc finger, double-stranded RNA bindingPFAMPF12171zf-C2H2_jazcoord: 20..45
e-value: 1.0E-6
score: 28.9
IPR040107U4/U6.U5 small nuclear ribonucleoprotein component Snu23PANTHERPTHR45986ZINC FINGER MATRIN-TYPE PROTEIN 2coord: 7..138
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 15..61

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsat.G19921Cucsat.G19921gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G19921.T12.E1Cucsat.G19921.T12.E1exon
Cucsat.G19921.T12.E2Cucsat.G19921.T12.E2exon
Cucsat.G19921.T12.E3Cucsat.G19921.T12.E3exon
Cucsat.G19921.T12.E4Cucsat.G19921.T12.E4exon
Cucsat.G19921.T12.E5Cucsat.G19921.T12.E5exon
Cucsat.G19921.T12.E6Cucsat.G19921.T12.E6exon
Cucsat.G19921.T12.E7Cucsat.G19921.T12.E7exon
Cucsat.G19921.T12.E8Cucsat.G19921.T12.E8exon
Cucsat.G19921.T12.E9Cucsat.G19921.T12.E9exon
Cucsat.G19921.T12.E10Cucsat.G19921.T12.E10exon
Cucsat.G19921.T12.E11Cucsat.G19921.T12.E11exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G19921.T12.C1Cucsat.G19921.T12.C1CDS
Cucsat.G19921.T12.C2Cucsat.G19921.T12.C2CDS
Cucsat.G19921.T12.C3Cucsat.G19921.T12.C3CDS
Cucsat.G19921.T12.C4Cucsat.G19921.T12.C4CDS
Cucsat.G19921.T12.C5Cucsat.G19921.T12.C5CDS
Cucsat.G19921.T12.C6Cucsat.G19921.T12.C6CDS
Cucsat.G19921.T12.C7Cucsat.G19921.T12.C7CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsat.G19921.T12Cucsat.G19921.T12-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000398 mRNA splicing, via spliceosome
cellular_component GO:0005681 spliceosomal complex
cellular_component GO:0046540 U4/U6 x U5 tri-snRNP complex
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding