Carg08773 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAAGGAAAAGCAAAACGTACCAGCCCAGGCCGAAGCTATCAAGAGAGCAGCTAAGCGTAATCTTCCGAAACCACGACGGCGATGGCGACGGCCGTCTAAGCACCACCGAGCTCACTGCAGCTTTCAGGTACATCGGCGCATTTCTTCCGTCCTACAGAGCTCTCCACGCTCTCCTTCACACCGATTCCGATGGAGATGGATTCATCGGCGAGAAGGATTTCGAATTGCTCGTCAATTATGCCGAGAAACGCAAATACACCGTCATTTGA ATGGCAAGGAAAAGCAAAACGTACCAGCCCAGGCCGAAGCTATCAAGAGAGCAGCTAAGCGTAATCTTCCGAAACCACGACGGCGATGGCGACGGCCGTCTAAGCACCACCGAGCTCACTGCAGCTTTCAGGTACATCGGCGCATTTCTTCCGTCCTACAGAGCTCTCCACGCTCTCCTTCACACCGATTCCGATGGAGATGGATTCATCGGCGAGAAGGATTTCGAATTGCTCGTCAATTATGCCGAGAAACGCAAATACACCGTCATTTGA ATGGCAAGGAAAAGCAAAACGTACCAGCCCAGGCCGAAGCTATCAAGAGAGCAGCTAAGCGTAATCTTCCGAAACCACGACGGCGATGGCGACGGCCGTCTAAGCACCACCGAGCTCACTGCAGCTTTCAGGTACATCGGCGCATTTCTTCCGTCCTACAGAGCTCTCCACGCTCTCCTTCACACCGATTCCGATGGAGATGGATTCATCGGCGAGAAGGATTTCGAATTGCTCGTCAATTATGCCGAGAAACGCAAATACACCGTCATTTGA MARKSKTYQPRPKLSREQLSVIFRNHDGDGDGRLSTTELTAAFRYIGAFLPSYRALHALLHTDSDGDGFIGEKDFELLVNYAEKRKYTVI
BLAST of Carg08773 vs. NCBI nr
Match: KGN55185.1 (hypothetical protein Csa_4G639730 [Cucumis sativus]) HSP 1 Score: 151.8 bits (382), Expect = 1.1e-33 Identity = 73/90 (81.11%), Postives = 79/90 (87.78%), Query Frame = 0
BLAST of Carg08773 vs. NCBI nr
Match: POF10332.1 (calcium-binding allergen ole e 8 [Quercus suber]) HSP 1 Score: 87.0 bits (214), Expect = 3.5e-14 Identity = 42/91 (46.15%), Postives = 62/91 (68.13%), Query Frame = 0
BLAST of Carg08773 vs. NCBI nr
Match: XP_022144349.1 (calmodulin-like protein 5 [Momordica charantia]) HSP 1 Score: 85.1 bits (209), Expect = 1.3e-13 Identity = 43/90 (47.78%), Postives = 58/90 (64.44%), Query Frame = 0
BLAST of Carg08773 vs. NCBI nr
Match: KGN62515.1 (hypothetical protein Csa_2G358860 [Cucumis sativus]) HSP 1 Score: 84.3 bits (207), Expect = 2.2e-13 Identity = 39/78 (50.00%), Postives = 52/78 (66.67%), Query Frame = 0
BLAST of Carg08773 vs. NCBI nr
Match: XP_004152805.1 (PREDICTED: probable calcium-binding protein CML10 [Cucumis sativus]) HSP 1 Score: 82.8 bits (203), Expect = 6.5e-13 Identity = 38/74 (51.35%), Postives = 51/74 (68.92%), Query Frame = 0
BLAST of Carg08773 vs. TAIR10
Match: AT3G50770.1 (calmodulin-like 41) HSP 1 Score: 51.2 bits (121), Expect = 3.8e-07 Identity = 23/61 (37.70%), Postives = 36/61 (59.02%), Query Frame = 0
BLAST of Carg08773 vs. TAIR10
Match: AT1G76650.1 (calmodulin-like 38) HSP 1 Score: 45.4 bits (106), Expect = 2.1e-05 Identity = 21/69 (30.43%), Postives = 38/69 (55.07%), Query Frame = 0
BLAST of Carg08773 vs. TAIR10
Match: AT1G76640.1 (Calcium-binding EF-hand family protein) HSP 1 Score: 43.5 bits (101), Expect = 8.0e-05 Identity = 21/61 (34.43%), Postives = 33/61 (54.10%), Query Frame = 0
BLAST of Carg08773 vs. TAIR10
Match: AT1G24620.1 (EF hand calcium-binding protein family) HSP 1 Score: 43.1 bits (100), Expect = 1.0e-04 Identity = 20/63 (31.75%), Postives = 33/63 (52.38%), Query Frame = 0
BLAST of Carg08773 vs. TAIR10
Match: AT1G18210.1 (Calcium-binding EF-hand family protein) HSP 1 Score: 42.7 bits (99), Expect = 1.4e-04 Identity = 20/62 (32.26%), Postives = 30/62 (48.39%), Query Frame = 0
BLAST of Carg08773 vs. Swiss-Prot
Match: sp|Q8L3R2|CML41_ARATH (Probable calcium-binding protein CML41 OS=Arabidopsis thaliana OX=3702 GN=CML41 PE=2 SV=2) HSP 1 Score: 51.2 bits (121), Expect = 6.9e-06 Identity = 23/61 (37.70%), Postives = 36/61 (59.02%), Query Frame = 0
BLAST of Carg08773 vs. Swiss-Prot
Match: sp|Q39419|POLC4_BETPN (Polcalcin Bet v 4 OS=Betula pendula OX=3505 GN=BETV4 PE=1 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 1.2e-05 Identity = 25/66 (37.88%), Postives = 38/66 (57.58%), Query Frame = 0
BLAST of Carg08773 vs. Swiss-Prot
Match: sp|Q0DJV6|CML18_ORYSJ (Probable calcium-binding protein CML18 OS=Oryza sativa subsp. japonica OX=39947 GN=CML18 PE=2 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 2.2e-04 Identity = 21/58 (36.21%), Postives = 32/58 (55.17%), Query Frame = 0
BLAST of Carg08773 vs. Swiss-Prot
Match: sp|O81701|POLC4_ALNGL (Polcalcin Aln g 4 OS=Alnus glutinosa OX=3517 PE=1 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 2.2e-04 Identity = 21/54 (38.89%), Postives = 33/54 (61.11%), Query Frame = 0
BLAST of Carg08773 vs. Swiss-Prot
Match: sp|Q9SRE6|CML38_ARATH (Calcium-binding protein CML38 OS=Arabidopsis thaliana OX=3702 GN=CML38 PE=2 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 3.8e-04 Identity = 21/69 (30.43%), Postives = 38/69 (55.07%), Query Frame = 0
BLAST of Carg08773 vs. TrEMBL
Match: tr|A0A0A0KZR6|A0A0A0KZR6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639730 PE=4 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 7.6e-34 Identity = 73/90 (81.11%), Postives = 79/90 (87.78%), Query Frame = 0
BLAST of Carg08773 vs. TrEMBL
Match: tr|A0A2P4LY04|A0A2P4LY04_QUESU (Calcium-binding allergen ole e 8 OS=Quercus suber OX=58331 GN=CFP56_50060 PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 2.3e-14 Identity = 42/91 (46.15%), Postives = 62/91 (68.13%), Query Frame = 0
BLAST of Carg08773 vs. TrEMBL
Match: tr|A0A0A0LKW4|A0A0A0LKW4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G358860 PE=4 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 1.5e-13 Identity = 39/78 (50.00%), Postives = 52/78 (66.67%), Query Frame = 0
BLAST of Carg08773 vs. TrEMBL
Match: tr|A0A0A0LRC1|A0A0A0LRC1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G358870 PE=4 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 4.3e-13 Identity = 38/74 (51.35%), Postives = 51/74 (68.92%), Query Frame = 0
BLAST of Carg08773 vs. TrEMBL
Match: tr|A0A1J6IU85|A0A1J6IU85_NICAT (Uncharacterized protein OS=Nicotiana attenuata OX=49451 GN=A4A49_00311 PE=4 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 1.3e-12 Identity = 39/76 (51.32%), Postives = 52/76 (68.42%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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