Cucsa.232790 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.232790
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionCalcium-binding EF-hand family protein, putative
Locationscaffold01989 : 604732 .. 605225 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTGGGCTAAGAATGAAGCAAATGAGTTGATAAAGAAGTATGATAGAAATGGTGATGGTGTTCTCACTAAAGAAGAGCTACAATCTTTCCTTCGTGATGCTCGTGGTTCAACTCAACTCAATAATATAAGGAATGTATCGTCTAGCACAGTCCCAAAAACTAACGAAAATCTTGCACAGAAGGTTAGCTCAAATACTTGCATAACACCAAAAAAGCAGTTGTTGGATAAAGCTCAAGGTTCGTCGAAACAATCTAATGTACCTTTGAGTCGAGAGCAGATAAAAGAGATTTTTAAATATCATGACAGCAACAAAGATGGTTTTCTCAGCATACGGGAGTTAACAAAAGCTTTCAGCTCTATGGGATCAATTGTCCCATTTTGCAAAGCTCGATATGCTATGGCTTATGCTGATGTCGATGAAGACGGTCTTGTCGGTGAGGCCGAGCTTGACAAACTCATTGATTATGCCCATAAAATCATCAAGAAGAAATGA

mRNA sequence

CTTGGGCTAAGAATGAAGCAAATGAGTTGATAAAGAAGTATGATAGAAATGGTGATGGTGTTCTCACTAAAGAAGAGCTACAATCTTTCCTTCGTGATGCTCGTGGTTCAACTCAACTCAATAATATAAGGAATGTATCGTCTAGCACAGTCCCAAAAACTAACGAAAATCTTGCACAGAAGGTTAGCTCAAATACTTGCATAACACCAAAAAAGCAGTTGTTGGATAAAGCTCAAGGTTCGTCGAAACAATCTAATGTACCTTTGAGTCGAGAGCAGATAAAAGAGATTTTTAAATATCATGACAGCAACAAAGATGGTTTTCTCAGCATACGGGAGTTAACAAAAGCTTTCAGCTCTATGGGATCAATTGTCCCATTTTGCAAAGCTCGATATGCTATGGCTTATGCTGATGTCGATGAAGACGGTCTTGTCGGTGAGGCCGAGCTTGACAAACTCATTGATTATGCCCATAAAATCATCAAGAAGAAATGA

Coding sequence (CDS)

CTTGGGCTAAGAATGAAGCAAATGAGTTGATAAAGAAGTATGATAGAAATGGTGATGGTGTTCTCACTAAAGAAGAGCTACAATCTTTCCTTCGTGATGCTCGTGGTTCAACTCAACTCAATAATATAAGGAATGTATCGTCTAGCACAGTCCCAAAAACTAACGAAAATCTTGCACAGAAGGTTAGCTCAAATACTTGCATAACACCAAAAAAGCAGTTGTTGGATAAAGCTCAAGGTTCGTCGAAACAATCTAATGTACCTTTGAGTCGAGAGCAGATAAAAGAGATTTTTAAATATCATGACAGCAACAAAGATGGTTTTCTCAGCATACGGGAGTTAACAAAAGCTTTCAGCTCTATGGGATCAATTGTCCCATTTTGCAAAGCTCGATATGCTATGGCTTATGCTGATGTCGATGAAGACGGTCTTGTCGGTGAGGCCGAGCTTGACAAACTCATTGATTATGCCCATAAAATCATCAAGAAGAAATGA

Protein sequence

WAKNEANELIKKYDRNGDGVLTKEELQSFLRDARGSTQLNNIRNVSSSTVPKTNENLAQKVSSNTCITPKKQLLDKAQGSSKQSNVPLSREQIKEIFKYHDSNKDGFLSIRELTKAFSSMGSIVPFCKARYAMAYADVDEDGLVGEAELDKLIDYAHKIIKKK*
Homology
[Close]
BLAST of Cucsa.232790 vs. Swiss-Prot
Match: CML11_ORYSJ (Probable calcium-binding protein CML11 OS=Oryza sativa subsp. japonica GN=CML11 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.5e-08
Identity = 41/152 (26.97%), Postives = 68/152 (44.74%), Query Frame = 1 

Query: 5   EANELIKKYDRNGDGVLTKEELQSFLRDARGSTQLNNIRNVSSSTVPKTNENLAQKVSSN 64
           E  E+ + +DRNGDG LT+ EL S LR        + + ++       TN N   + S  
Sbjct: 64  ELREIFRSFDRNGDGSLTQLELGSLLRSLGLKPSTDELDSLIQRA--DTNSNGLIEFSEF 123

Query: 65  TCITPKKQLLDKAQGSSKQSNVPLSREQIKEIFKYHDSNKDGFLSIRELTKAFSSMGSIV 124
             +   + L D+A         P S +QI+ +F   D + +GF++  EL  + + +G  +
Sbjct: 124 VALVAPELLYDRA---------PYSEDQIRRLFNIFDRDGNGFITAAELAHSMAKLGHAL 183

Query: 125 PFCKARYAMAYADVDEDGLVGEAELDKLIDYA 157
              +    +  AD D DG +   E  + I  A
Sbjct: 184 TVKELTGMIKEADTDGDGRISFQEFSRAITAA 204

[Close]
BLAST of Cucsa.232790 vs. Swiss-Prot
Match: CML17_ARATH (Probable calcium-binding protein CML17 OS=Arabidopsis thaliana GN=CML17 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.7e-07
Identity = 41/153 (26.80%), Postives = 72/153 (47.06%), Query Frame = 1 

Query: 4   NEANELIKKYDRNGDGVLTKEELQSFLRDARGSTQLNNIRNVSSSTVPKTNENLAQKVSS 63
           NE  E+ + +DRN DG LT+ EL S LR        +    +      K+N  L +    
Sbjct: 15  NELREIFRSFDRNKDGSLTQLELGSLLRALGVKPSPDQFETLIDKADTKSN-GLVEFPEF 74

Query: 64  NTCITPKKQLLDKAQGSSKQSNVPLSREQIKEIFKYHDSNKDGFLSIRELTKAFSSMGSI 123
              ++P  +LL  A+ ++     P + EQ+  +F+  D++ +GF++  EL  + + +G  
Sbjct: 75  VALVSP--ELLSPAKRTT-----PYTEEQLLRLFRIFDTDGNGFITAAELAHSMAKLGHA 134

Query: 124 VPFCKARYAMAYADVDEDGLVGEAELDKLIDYA 157
           +   +    +  AD D DG +   E  K I+ A
Sbjct: 135 LTVAELTGMIKEADSDGDGRINFQEFAKAINSA 159

[Close]
BLAST of Cucsa.232790 vs. TrEMBL
Match: A0A0A0LRC8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G359950 PE=4 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 7.1e-85
Identity = 162/163 (99.39%), Postives = 162/163 (99.39%), Query Frame = 1 

Query: 1   WAKNEANELIKKYDRNGDGVLTKEELQSFLRDARGSTQLNNIRNVSSSTVPKTNENLAQK 60
           WAKNEANELIKKYDRNGDGVLTKEELQSFLRDARGSTQLNNIRNVSSSTVPKTNENLAQK
Sbjct: 9   WAKNEANELIKKYDRNGDGVLTKEELQSFLRDARGSTQLNNIRNVSSSTVPKTNENLAQK 68

Query: 61  VSSNTCITPKKQLLDKAQGSSKQSNVPLSREQIKEIFKYHDSNKDGFLSIRELTKAFSSM 120
           VSSNTCITPKKQLLDKAQGSSKQSNVPLSREQIKEIFKYHDSNKDGFLSIRELTKAFSSM
Sbjct: 69  VSSNTCITPKKQLLDKAQGSSKQSNVPLSREQIKEIFKYHDSNKDGFLSIRELTKAFSSM 128

Query: 121 GSIVPFCKARYAMAYADVDEDGLVGEAELDKLIDYAHKIIKKK 164
           GSIVPFCKARYAMAYADVDEDGLV EAELDKLIDYAHKIIKKK
Sbjct: 129 GSIVPFCKARYAMAYADVDEDGLVSEAELDKLIDYAHKIIKKK 171

[Close]
BLAST of Cucsa.232790 vs. TrEMBL
Match: A0A0A0KLF3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G067670 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 4.2e-37
Identity = 87/168 (51.79%), Postives = 124/168 (73.81%), Query Frame = 1 

Query: 2   AKNEANELIKKYDRNGDGVLTKEELQSFLRDARGSTQLNNIRNVSSSTVPKTNENLAQKV 61
           AK EA++L+KKY++NG+GV+    L +F  +ARGSTQ+N  R +++  + K N+++A K+
Sbjct: 38  AKYEASKLMKKYEQNGEGVI----LSAFNDNARGSTQINTNREMATKKL-KPNDDVAHKL 97

Query: 62  SSNTCITPKKQLLDKAQG------SSKQSNVPLSREQIKEIFKYHDSNKDGFLSIRELTK 121
           SSN  +    Q+  KAQ        +K SN+  SREQIKEIF+Y+DS++DGFL+IRE+TK
Sbjct: 98  SSNAQLKSNNQIRGKAQVPIKRVYDTKASNMQFSREQIKEIFQYYDSDRDGFLNIREVTK 157

Query: 122 AFSSMGSIVPFCKARYAMAYADVDEDGLVGEAELDKLIDYAHKIIKKK 164
           AF+ +GSI PF KA + M YAD ++DGL+GE ELDKLI+YA+K +KKK
Sbjct: 158 AFALLGSIFPFNKAYHGMVYADTNKDGLIGEDELDKLINYANKFMKKK 200

[Close]
BLAST of Cucsa.232790 vs. TrEMBL
Match: A0A0A0KMQ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G067410 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.4e-32
Identity = 85/168 (50.60%), Postives = 109/168 (64.88%), Query Frame = 1 

Query: 2   AKNEANELIKKYDRNGDGVLTKEELQSFLRDARGSTQLNNIRNVSSSTVPKTNENLAQKV 61
           A  EA+ LIK+Y++NGD V  K        D R STQ+ N  +V    + K ++ +A K+
Sbjct: 11  AMYEASMLIKQYEKNGDAVKVKA-----FDDVRSSTQIGNRESVLK--ILKPSDGVAHKL 70

Query: 62  SSNTCITPKKQLLDKAQGS------SKQSNVPLSREQIKEIFKYHDSNKDGFLSIRELTK 121
            S   I P ++   K + S       K SN+ LSRE+IKEIF+YHD+N DGFL+  ELTK
Sbjct: 71  RSEAHIQPTQRTGGKGKKSITRVLDRKSSNMSLSRERIKEIFQYHDNNNDGFLNRMELTK 130

Query: 122 AFSSMGSIVPFCKARYAMAYADVDEDGLVGEAELDKLIDYAHKIIKKK 164
           AF+ +GS+ PF KA Y M YAD +EDGL+ EAELDKLIDYA KIIKKK
Sbjct: 131 AFAFLGSMFPFYKACYGMVYADANEDGLISEAELDKLIDYASKIIKKK 171

[Close]
BLAST of Cucsa.232790 vs. TrEMBL
Match: A0A0A0KIY4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G068170 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 9.5e-29
Identity = 75/170 (44.12%), Postives = 116/170 (68.24%), Query Frame = 1 

Query: 2   AKNEANELIKKYDRNGDGVLTKEELQSFLRDARGSTQLNNIRNVSSSTVPK-TNENLAQK 61
           AK EA++L+KK++ N +GV     L++F      ST++NN + +++  + K +N  +A  
Sbjct: 11  AKYEASKLMKKHENNDEGV----PLKAFNGIPPASTKINNKQAMATEIILKPSNHPVAHY 70

Query: 62  VSSNTCITPKKQL-LDKAQGSS------KQSNVPLSREQIKEIFKYHDSNKDGFLSIREL 121
           ++SN  + P KQL   KAQ ++      K SN+  SREQIKEIF+YHDS+ DGFL++RE+
Sbjct: 71  LTSNAYMIPSKQLGAGKAQVTTTSVLDIKASNMQFSREQIKEIFQYHDSDNDGFLNLREV 130

Query: 122 TKAFSSMGSIVPFCKARYAMAYADVDEDGLVGEAELDKLIDYAHKIIKKK 164
           TKAF+ +G+I+P  KA + M YAD ++DGL+ + EL+KL+DYA+K   K+
Sbjct: 131 TKAFAFLGTILPLYKAYHGMVYADANKDGLISKDELEKLVDYAYKFFNKR 176

[Close]
BLAST of Cucsa.232790 vs. TrEMBL
Match: A0A0A0LNG6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G359930 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.7e-17
Identity = 59/161 (36.65%), Postives = 90/161 (55.90%), Query Frame = 1 

Query: 2   AKNEANELIKKYDRNGDGVLTKEELQSFLRDARGSTQLNNIRNVSSSTVPKTNENLAQKV 61
           ++ EA+ LIKKYD+NGD +LTK+EL + + +   S     I+               QKV
Sbjct: 19  SEQEASNLIKKYDKNGDSILTKDELTALIIEQAASHHHQQIK--------------PQKV 78

Query: 62  SSNTCITPKKQLLDKAQGSSKQSNVPLSREQIKEIFKYHDSNKDGFLSIRELTKAFSSMG 121
                  PK  + D+ + S     + LS+++++EIF  HD + DG+L+  EL KAF+  G
Sbjct: 79  E------PKVNIPDE-KASCGPYKMRLSKDEMREIFLEHDIDGDGYLTRSELVKAFNMCG 138

Query: 122 SIVPFCKARYAMAYADVDEDGLVGEAELDKLIDYAHKIIKK 163
           S   F KA YA+  AD + DG +   ELDK+++YA ++I K
Sbjct: 139 SFNSFSKANYALNLADANGDGFICLDELDKVLEYADRVINK 158

[Close]
BLAST of Cucsa.232790 vs. TAIR10
Match: AT1G32250.1 (AT1G32250.1 Calcium-binding EF-hand family protein)

HSP 1 Score: 57.4 bits (137), Expect = 9.7e-09
Identity = 41/153 (26.80%), Postives = 72/153 (47.06%), Query Frame = 1 

Query: 4   NEANELIKKYDRNGDGVLTKEELQSFLRDARGSTQLNNIRNVSSSTVPKTNENLAQKVSS 63
           NE  E+ + +DRN DG LT+ EL S LR        +    +      K+N  L +    
Sbjct: 15  NELREIFRSFDRNKDGSLTQLELGSLLRALGVKPSPDQFETLIDKADTKSN-GLVEFPEF 74

Query: 64  NTCITPKKQLLDKAQGSSKQSNVPLSREQIKEIFKYHDSNKDGFLSIRELTKAFSSMGSI 123
              ++P  +LL  A+ ++     P + EQ+  +F+  D++ +GF++  EL  + + +G  
Sbjct: 75  VALVSP--ELLSPAKRTT-----PYTEEQLLRLFRIFDTDGNGFITAAELAHSMAKLGHA 134

Query: 124 VPFCKARYAMAYADVDEDGLVGEAELDKLIDYA 157
           +   +    +  AD D DG +   E  K I+ A
Sbjct: 135 LTVAELTGMIKEADSDGDGRINFQEFAKAINSA 159

[Close]
BLAST of Cucsa.232790 vs. TAIR10
Match: AT4G20780.1 (AT4G20780.1 calmodulin like 42)

HSP 1 Score: 49.3 bits (116), Expect = 2.6e-06
Identity = 33/113 (29.20%), Postives = 49/113 (43.36%), Query Frame = 1 

Query: 13  YDRNGDGVLTKEELQSFLRDARGSTQLNNIRNVSSSTVPKTNENLAQKVSSNTCITPKKQ 72
           +D+NGDG +T EEL   L     +  L+++++   S +   N  L     S+   T    
Sbjct: 37  FDKNGDGFITVEELSQALTRLGLNADLSDLKSTVESYIQPGNTGLNFDDFSSLHKTLDDS 96

Query: 73  LLDKAQGSSKQSNVPLS----REQIKEIFKYHDSNKDGFLSIRELTKAFSSMG 122
               A G  +  + P S       + E FK  D N DGF+S REL      +G
Sbjct: 97  FFGGACGGGENEDDPSSAAENESDLAEAFKVFDENGDGFISARELQTVLKKLG 149


HSP 2 Score: 32.7 bits (73), Expect = 2.6e-01
Identity = 14/52 (26.92%), Postives = 31/52 (59.62%), Query Frame = 1 

Query: 70  KKQLLDKAQGSSKQSNVPLSREQIKEIFKYHDSNKDGFLSIRELTKAFSSMG 122
           +K+ + +   S +  +  L+  +++ IF   D N DGF+++ EL++A + +G
Sbjct: 7   EKKKVARQSSSFRLRSPSLNALRLQRIFDLFDKNGDGFITVEELSQALTRLG 58


HSP 3 Score: 30.0 bits (66), Expect = 1.7e+00
Identity = 14/32 (43.75%), Postives = 22/32 (68.75%), Query Frame = 1 

Query: 2   AKNEAN--ELIKKYDRNGDGVLTKEELQSFLR 32
           A+NE++  E  K +D NGDG ++  ELQ+ L+
Sbjct: 115 AENESDLAEAFKVFDENGDGFISARELQTVLK 146

[Close]
BLAST of Cucsa.232790 vs. TAIR10
Match: AT4G12860.1 (AT4G12860.1 EF hand calcium-binding protein family)

HSP 1 Score: 49.3 bits (116), Expect = 2.6e-06
Identity = 36/155 (23.23%), Postives = 71/155 (45.81%), Query Frame = 1 

Query: 3   KNEANELIKKYDRNGDGVLTKEELQSFLRDARGSTQLNNIRNVSSSTVPKTNENLAQKVS 62
           + E + + + +D+NGDG + K EL+ F +        N I  +    + K + N    + 
Sbjct: 3   RGELSRVFQMFDKNGDGKIAKNELKDFFKSVGIMVPENEINEM----IAKMDVNGDGAMD 62

Query: 63  SNTCITPKKQLLDKAQGSSKQSNVPLSREQIKEIFKYHDSNKDGFLSIRELTKAFSSM-- 122
            +   +  ++++++ +            E ++E F+  D N DGF++  EL    +SM  
Sbjct: 63  IDEFGSLYQEMVEEKE----------EEEDMREAFRVFDQNGDGFITDEELRSVLASMGL 122

Query: 123 --GSIVPFCKARYAMAYADVDEDGLVGEAELDKLI 154
             G  +  CK    ++  DVD DG+V   E  +++
Sbjct: 123 KQGRTLEDCKK--MISKVDVDGDGMVNFKEFKQMM 141

[Close]
BLAST of Cucsa.232790 vs. TAIR10
Match: AT2G41100.1 (AT2G41100.1 Calcium-binding EF hand family protein)

HSP 1 Score: 48.5 bits (114), Expect = 4.5e-06
Identity = 45/167 (26.95%), Postives = 75/167 (44.91%), Query Frame = 1 

Query: 5   EANELIKKYDRNGDGVLTKEELQSF---LRDARGSTQLNNIRNVSSSTVPKTNENLAQKV 64
           E  E  + +D+NGDG +TK+EL++    L   R    L ++ N        T +      
Sbjct: 101 EYRESFRLFDKNGDGSITKKELRTVMFSLGKNRTKADLQDMMNEVDLDGDGTID-----F 160

Query: 65  SSNTCITPKKQLLDKAQGSSKQSNV--PLSREQI---KEIFKYHDSNKDGFLSIRELTKA 124
                +  K Q  D+A   +K++ V   L+ +QI   +E F+  D N DG++++ EL   
Sbjct: 161 PEFLYLMAKNQGHDQAPRHTKKTMVDYQLTDDQILEFREAFRVFDKNGDGYITVNELRTT 220

Query: 125 FSSMGSIVPFCKARYAMAYADVDEDGLVGEAEL-----DKLIDYAHK 159
             S+G      + +  +  AD D DG +  +E       K+ID   K
Sbjct: 221 MRSLGETQTKAELQDMINEADADGDGTISFSEFVCVMTGKMIDTQSK 262


HSP 2 Score: 46.2 bits (108), Expect = 2.2e-05
Identity = 36/144 (25.00%), Postives = 67/144 (46.53%), Query Frame = 1 

Query: 5   EANELIKKYDRNGDGVLTKEELQSFLRDARGSTQLNNIRNVSSSTVPKTNENLAQKVSSN 64
           E  E  + +D+NGDG +TK+EL + +R         +++++ +      +  +       
Sbjct: 12  EYRESFRLFDKNGDGSITKKELGTMMRSIGEKPTKADLQDLMNEADLDGDGTI--DFPEF 71

Query: 65  TCITPKKQLLDKAQGSSKQSNV-PLSREQI---KEIFKYHDSNKDGFLSIRELTKAFSSM 124
            C+  K Q  D+A   +K++    L+ +QI   +E F+  D N DG ++ +EL     S+
Sbjct: 72  LCVMAKNQGHDQAPRHTKKTMADKLTDDQITEYRESFRLFDKNGDGSITKKELRTVMFSL 131

Query: 125 GSIVPFCKARYAMAYADVDEDGLV 145
           G        +  M   D+D DG +
Sbjct: 132 GKNRTKADLQDMMNEVDLDGDGTI 153

[Close]
BLAST of Cucsa.232790 vs. TAIR10
Match: AT3G07490.1 (AT3G07490.1 ARF-GAP domain 11)

HSP 1 Score: 48.1 bits (113), Expect = 5.9e-06
Identity = 38/156 (24.36%), Postives = 68/156 (43.59%), Query Frame = 1 

Query: 5   EANELIKKYDRNGDGVLTKEELQSFLRDARGSTQLNNIRNVSSSTVPKTNENLAQKVSSN 64
           E   + + +DRNGDG +TK+EL             +++ N+      K    + +K+  N
Sbjct: 5   ELARIFQMFDRNGDGKITKQELN------------DSLENLGIYIPDKDLVQMIEKIDLN 64

Query: 65  TCITPKKQLLDKAQGSSKQSNVPLSR---EQIKEIFKYHDSNKDGFLSIRELTKAFSSM- 124
                    +D  +       +   R   E ++E F   D N+DGF+++ EL    +S+ 
Sbjct: 65  G-----DGYVDIEEFGGLYQTIMEERDEEEDMREAFNVFDQNRDGFITVEELRSVLASLG 124

Query: 125 ---GSIVPFCKARYAMAYADVDEDGLVGEAELDKLI 154
              G  +  CK    ++  DVD DG+V   E  +++
Sbjct: 125 LKQGRTLEDCKR--MISKVDVDGDGMVNFKEFKQMM 141

[Close]
BLAST of Cucsa.232790 vs. NCBI nr
Match: gi|449470190|ref|XP_004152801.1| (PREDICTED: probable calcium-binding protein CML11 [Cucumis sativus])

HSP 1 Score: 321.2 bits (822), Expect = 1.0e-84
Identity = 162/163 (99.39%), Postives = 162/163 (99.39%), Query Frame = 1 

Query: 1   WAKNEANELIKKYDRNGDGVLTKEELQSFLRDARGSTQLNNIRNVSSSTVPKTNENLAQK 60
           WAKNEANELIKKYDRNGDGVLTKEELQSFLRDARGSTQLNNIRNVSSSTVPKTNENLAQK
Sbjct: 9   WAKNEANELIKKYDRNGDGVLTKEELQSFLRDARGSTQLNNIRNVSSSTVPKTNENLAQK 68

Query: 61  VSSNTCITPKKQLLDKAQGSSKQSNVPLSREQIKEIFKYHDSNKDGFLSIRELTKAFSSM 120
           VSSNTCITPKKQLLDKAQGSSKQSNVPLSREQIKEIFKYHDSNKDGFLSIRELTKAFSSM
Sbjct: 69  VSSNTCITPKKQLLDKAQGSSKQSNVPLSREQIKEIFKYHDSNKDGFLSIRELTKAFSSM 128

Query: 121 GSIVPFCKARYAMAYADVDEDGLVGEAELDKLIDYAHKIIKKK 164
           GSIVPFCKARYAMAYADVDEDGLV EAELDKLIDYAHKIIKKK
Sbjct: 129 GSIVPFCKARYAMAYADVDEDGLVSEAELDKLIDYAHKIIKKK 171

[Close]
BLAST of Cucsa.232790 vs. NCBI nr
Match: gi|659089539|ref|XP_008445564.1| (PREDICTED: probable calcium-binding protein CML11 [Cucumis melo])

HSP 1 Score: 264.6 bits (675), Expect = 1.1e-67
Identity = 139/163 (85.28%), Postives = 145/163 (88.96%), Query Frame = 1 

Query: 1   WAKNEANELIKKYDRNGDGVLTKEELQSFLRDARGSTQLNNIRNVSSSTVPKTNENLAQK 60
           WAK EA+ELIKKYDRNGDGVLTKEELQSFL DAR    L NIR VSSST+PKTNENL QK
Sbjct: 9   WAKIEASELIKKYDRNGDGVLTKEELQSFLHDAR----LKNIRFVSSSTIPKTNENLDQK 68

Query: 61  VSSNTCITPKKQLLDKAQGSSKQSNVPLSREQIKEIFKYHDSNKDGFLSIRELTKAFSSM 120
           VSSNT I PKKQLLDKAQ S +QSNVPLSREQIKEIFKYHDSNKDGFLSIRELTKAF S+
Sbjct: 69  VSSNTRIKPKKQLLDKAQDSLRQSNVPLSREQIKEIFKYHDSNKDGFLSIRELTKAFGSL 128

Query: 121 GSIVPFCKARYAMAYADVDEDGLVGEAELDKLIDYAHKIIKKK 164
           GSIVPF KAR+AMAYADVDEDGL+ EAEL KLIDYA KIIKKK
Sbjct: 129 GSIVPFAKARHAMAYADVDEDGLISEAELHKLIDYAEKIIKKK 167

[Close]
BLAST of Cucsa.232790 vs. NCBI nr
Match: gi|700194512|gb|KGN49689.1| (hypothetical protein Csa_5G067670 [Cucumis sativus])

HSP 1 Score: 162.5 bits (410), Expect = 6.1e-37
Identity = 87/168 (51.79%), Postives = 124/168 (73.81%), Query Frame = 1 

Query: 2   AKNEANELIKKYDRNGDGVLTKEELQSFLRDARGSTQLNNIRNVSSSTVPKTNENLAQKV 61
           AK EA++L+KKY++NG+GV+    L +F  +ARGSTQ+N  R +++  + K N+++A K+
Sbjct: 38  AKYEASKLMKKYEQNGEGVI----LSAFNDNARGSTQINTNREMATKKL-KPNDDVAHKL 97

Query: 62  SSNTCITPKKQLLDKAQG------SSKQSNVPLSREQIKEIFKYHDSNKDGFLSIRELTK 121
           SSN  +    Q+  KAQ        +K SN+  SREQIKEIF+Y+DS++DGFL+IRE+TK
Sbjct: 98  SSNAQLKSNNQIRGKAQVPIKRVYDTKASNMQFSREQIKEIFQYYDSDRDGFLNIREVTK 157

Query: 122 AFSSMGSIVPFCKARYAMAYADVDEDGLVGEAELDKLIDYAHKIIKKK 164
           AF+ +GSI PF KA + M YAD ++DGL+GE ELDKLI+YA+K +KKK
Sbjct: 158 AFALLGSIFPFNKAYHGMVYADTNKDGLIGEDELDKLINYANKFMKKK 200

[Close]
BLAST of Cucsa.232790 vs. NCBI nr
Match: gi|700194510|gb|KGN49687.1| (hypothetical protein Csa_5G067410 [Cucumis sativus])

HSP 1 Score: 147.5 bits (371), Expect = 2.0e-32
Identity = 85/168 (50.60%), Postives = 109/168 (64.88%), Query Frame = 1 

Query: 2   AKNEANELIKKYDRNGDGVLTKEELQSFLRDARGSTQLNNIRNVSSSTVPKTNENLAQKV 61
           A  EA+ LIK+Y++NGD V  K        D R STQ+ N  +V    + K ++ +A K+
Sbjct: 11  AMYEASMLIKQYEKNGDAVKVKA-----FDDVRSSTQIGNRESVLK--ILKPSDGVAHKL 70

Query: 62  SSNTCITPKKQLLDKAQGS------SKQSNVPLSREQIKEIFKYHDSNKDGFLSIRELTK 121
            S   I P ++   K + S       K SN+ LSRE+IKEIF+YHD+N DGFL+  ELTK
Sbjct: 71  RSEAHIQPTQRTGGKGKKSITRVLDRKSSNMSLSRERIKEIFQYHDNNNDGFLNRMELTK 130

Query: 122 AFSSMGSIVPFCKARYAMAYADVDEDGLVGEAELDKLIDYAHKIIKKK 164
           AF+ +GS+ PF KA Y M YAD +EDGL+ EAELDKLIDYA KIIKKK
Sbjct: 131 AFAFLGSMFPFYKACYGMVYADANEDGLISEAELDKLIDYASKIIKKK 171

[Close]
BLAST of Cucsa.232790 vs. NCBI nr
Match: gi|700194513|gb|KGN49690.1| (hypothetical protein Csa_5G068170 [Cucumis sativus])

HSP 1 Score: 134.8 bits (338), Expect = 1.4e-28
Identity = 75/170 (44.12%), Postives = 116/170 (68.24%), Query Frame = 1 

Query: 2   AKNEANELIKKYDRNGDGVLTKEELQSFLRDARGSTQLNNIRNVSSSTVPK-TNENLAQK 61
           AK EA++L+KK++ N +GV     L++F      ST++NN + +++  + K +N  +A  
Sbjct: 11  AKYEASKLMKKHENNDEGV----PLKAFNGIPPASTKINNKQAMATEIILKPSNHPVAHY 70

Query: 62  VSSNTCITPKKQL-LDKAQGSS------KQSNVPLSREQIKEIFKYHDSNKDGFLSIREL 121
           ++SN  + P KQL   KAQ ++      K SN+  SREQIKEIF+YHDS+ DGFL++RE+
Sbjct: 71  LTSNAYMIPSKQLGAGKAQVTTTSVLDIKASNMQFSREQIKEIFQYHDSDNDGFLNLREV 130

Query: 122 TKAFSSMGSIVPFCKARYAMAYADVDEDGLVGEAELDKLIDYAHKIIKKK 164
           TKAF+ +G+I+P  KA + M YAD ++DGL+ + EL+KL+DYA+K   K+
Sbjct: 131 TKAFAFLGTILPLYKAYHGMVYADANKDGLISKDELEKLVDYAYKFFNKR 176

The following BLAST results are available for this feature:
BLAST of Cucsa.232790 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CML11_ORYSJ3.5e-0826.97Probable calcium-binding protein CML11 OS=Oryza sativa subsp. japonica GN=CML11 ... [more]
CML17_ARATH1.7e-0726.80Probable calcium-binding protein CML17 OS=Arabidopsis thaliana GN=CML17 PE=2 SV=... [more]
BLAST of Cucsa.232790 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LRC8_CUCSA7.1e-8599.39Uncharacterized protein OS=Cucumis sativus GN=Csa_2G359950 PE=4 SV=1[more]
A0A0A0KLF3_CUCSA4.2e-3751.79Uncharacterized protein OS=Cucumis sativus GN=Csa_5G067670 PE=4 SV=1[more]
A0A0A0KMQ1_CUCSA1.4e-3250.60Uncharacterized protein OS=Cucumis sativus GN=Csa_5G067410 PE=4 SV=1[more]
A0A0A0KIY4_CUCSA9.5e-2944.12Uncharacterized protein OS=Cucumis sativus GN=Csa_5G068170 PE=4 SV=1[more]
A0A0A0LNG6_CUCSA1.7e-1736.65Uncharacterized protein OS=Cucumis sativus GN=Csa_2G359930 PE=4 SV=1[more]
BLAST of Cucsa.232790 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G32250.19.7e-0926.80 Calcium-binding EF-hand family protein[more]
AT4G20780.12.6e-0629.20 calmodulin like 42[more]
AT4G12860.12.6e-0623.23 EF hand calcium-binding protein family[more]
AT2G41100.14.5e-0626.95 Calcium-binding EF hand family protein[more]
AT3G07490.15.9e-0624.36 ARF-GAP domain 11[more]
BLAST of Cucsa.232790 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449470190|ref|XP_004152801.1|1.0e-8499.39PREDICTED: probable calcium-binding protein CML11 [Cucumis sativus][more]
gi|659089539|ref|XP_008445564.1|1.1e-6785.28PREDICTED: probable calcium-binding protein CML11 [Cucumis melo][more]
gi|700194512|gb|KGN49689.1|6.1e-3751.79hypothetical protein Csa_5G067670 [Cucumis sativus][more]
gi|700194510|gb|KGN49687.1|2.0e-3250.60hypothetical protein Csa_5G067410 [Cucumis sativus][more]
gi|700194513|gb|KGN49690.1|1.4e-2844.12hypothetical protein Csa_5G068170 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair
IPR018247EF_Hand_1_Ca_BS
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005509 calcium ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.232790.1Cucsa.232790.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 11..117
score: 6.5
IPR002048EF-hand domainSMARTSM00054efh_1coord: 5..33
score: 1.7E-4coord: 92..120
score: 0
IPR002048EF-hand domainPROFILEPS50222EF_HAND_2coord: 1..36
score: 12.198coord: 128..159
score: 5.782coord: 88..123
score: 13
IPR011992EF-hand domain pairGENE3DG3DSA:1.10.238.10coord: 3..37
score: 2.4E-10coord: 74..153
score: 3.2
IPR011992EF-hand domain pairunknownSSF47473EF-handcoord: 4..34
score: 3.27E-18coord: 75..149
score: 3.27
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 137..149
score: -coord: 101..113
score: -coord: 14..26
scor
NoneNo IPR availablePANTHERPTHR10891EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEINcoord: 67..156
score: 8.0
NoneNo IPR availablePANTHERPTHR10891:SF592CALCIUM-BINDING PROTEIN CML38-RELATEDcoord: 67..156
score: 8.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.232790Cla022560Watermelon (97103) v1cgywmB433
Cucsa.232790Csa2G359930Cucumber (Chinese Long) v2cgycuB326
Cucsa.232790MELO3C010876Melon (DHL92) v3.5.1cgymeB389
Cucsa.232790MELO3C016745Melon (DHL92) v3.5.1cgymeB391
Cucsa.232790ClCG08G015790Watermelon (Charleston Gray)cgywcgB407
Cucsa.232790CSPI02G19260Wild cucumber (PI 183967)cgycpiB341
Cucsa.232790CmaCh12G005320Cucurbita maxima (Rimu)cgycmaB0638
Cucsa.232790CmoCh12G004750Cucurbita moschata (Rifu)cgycmoB0641
Cucsa.232790Lsi08G014600Bottle gourd (USVL1VR-Ls)cgylsiB379
Cucsa.232790MELO3C010876.2Melon (DHL92) v3.6.1cgymedB387
Cucsa.232790Cla97C08G159380Watermelon (97103) v2cgywmbB409
Cucsa.232790Bhi04G000303Wax gourdcgywgoB458
Cucsa.232790Carg08773Silver-seed gourdcarcgyB0124
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.232790Melon (DHL92) v3.6.1cgymedB389
Cucsa.232790Silver-seed gourdcarcgyB0222
Cucsa.232790Silver-seed gourdcarcgyB0874
Cucsa.232790Cucumber (Chinese Long) v3cgycucB347
Cucsa.232790Cucumber (Chinese Long) v3cgycucB349
Cucsa.232790Watermelon (97103) v2cgywmbB408
Cucsa.232790Wax gourdcgywgoB461
Cucsa.232790Cucumber (Gy14) v1cgycgyB072
Cucsa.232790Cucurbita maxima (Rimu)cgycmaB0637
Cucsa.232790Cucurbita maxima (Rimu)cgycmaB0639
Cucsa.232790Cucurbita maxima (Rimu)cgycmaB0642
Cucsa.232790Cucurbita moschata (Rifu)cgycmoB0640
Cucsa.232790Cucurbita moschata (Rifu)cgycmoB0642
Cucsa.232790Cucurbita moschata (Rifu)cgycmoB0643
Cucsa.232790Wild cucumber (PI 183967)cgycpiB343
Cucsa.232790Cucumber (Chinese Long) v2cgycuB328
Cucsa.232790Watermelon (Charleston Gray)cgywcgB405
Cucsa.232790Watermelon (Charleston Gray)cgywcgB406
Cucsa.232790Watermelon (97103) v1cgywmB434
Cucsa.232790Watermelon (97103) v1cgywmB435
Cucsa.232790Cucurbita pepo (Zucchini)cgycpeB0611
Cucsa.232790Cucurbita pepo (Zucchini)cgycpeB0612
Cucsa.232790Cucurbita pepo (Zucchini)cgycpeB0613
Cucsa.232790Cucurbita pepo (Zucchini)cgycpeB0614
Cucsa.232790Bottle gourd (USVL1VR-Ls)cgylsiB378