ClCG08G015790 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG08G015790
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	calcium-dependent protein kinase 34 LENGTH=523
Location	CG_Chr08 : 28235415 .. 28235939 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGGTCTCTCAACGTCAAGCTTGGGCTGAGAATGAAGCAAATCAATTGATAAAGAAGTATGATAGAAATGGTGATGGTGTTCTCACTAAAGAAGAACTTCAATCTTTCTTCTACGATCGTTCAACTCAACTCAACAATACGAGGTTCGTGTCGTCTAAGATGATTTCAAAAACTAACAATCTTGTGCATAAGCTTAGCTCAAGCACTCATATGAATCCACAAAAGCAGTTGCGAGACAAAGCTCAAAATTCCTTGACAAAAGTACTTGATATAAAGCAATCCAATGCGTCCCTTAGTCGAGAGCAGATAAAGGAGATTTTTAAATATCATGACAGCGACAAAGATGGTTTTCTCAACATACGGGATTTAACAAAAGCTTTTGGCTCTCTGGGCTCAATTACTCCATTCTACAAAGCTCAATACGCCATGACTTATGCTGATGCTGATCAAGATGGTCTTATCAGTGAGGTCGAGCTTGACAAACTCGTTGATTATGCAAATAAAATTATCAAAAAAAAATGA

mRNA sequence

ATGTCGGTCTCTCAACGTCAAGCTTGGGCTGAGAATGAAGCAAATCAATTGATAAAGAAGTATGATAGAAATGGTGATGGTGTTCTCACTAAAGAAGAACTTCAATCTTTCTTCTACGATCGTTCAACTCAACTCAACAATACGAGGTTCGTGTCGTCTAAGATGATTTCAAAAACTAACAATCTTGTGCATAAGCTTAGCTCAAGCACTCATATGAATCCACAAAAGCAGTTGCGAGACAAAGCTCAAAATTCCTTGACAAAAGTACTTGATATAAAGCAATCCAATGCGTCCCTTAGTCGAGAGCAGATAAAGGAGATTTTTAAATATCATGACAGCGACAAAGATGGTTTTCTCAACATACGGGATTTAACAAAAGCTTTTGGCTCTCTGGGCTCAATTACTCCATTCTACAAAGCTCAATACGCCATGACTTATGCTGATGCTGATCAAGATGGTCTTATCAGTGAGGTCGAGCTTGACAAACTCGTTGATTATGCAAATAAAATTATCAAAAAAAAATGA

Coding sequence (CDS)

ATGTCGGTCTCTCAACGTCAAGCTTGGGCTGAGAATGAAGCAAATCAATTGATAAAGAAGTATGATAGAAATGGTGATGGTGTTCTCACTAAAGAAGAACTTCAATCTTTCTTCTACGATCGTTCAACTCAACTCAACAATACGAGGTTCGTGTCGTCTAAGATGATTTCAAAAACTAACAATCTTGTGCATAAGCTTAGCTCAAGCACTCATATGAATCCACAAAAGCAGTTGCGAGACAAAGCTCAAAATTCCTTGACAAAAGTACTTGATATAAAGCAATCCAATGCGTCCCTTAGTCGAGAGCAGATAAAGGAGATTTTTAAATATCATGACAGCGACAAAGATGGTTTTCTCAACATACGGGATTTAACAAAAGCTTTTGGCTCTCTGGGCTCAATTACTCCATTCTACAAAGCTCAATACGCCATGACTTATGCTGATGCTGATCAAGATGGTCTTATCAGTGAGGTCGAGCTTGACAAACTCGTTGATTATGCAAATAAAATTATCAAAAAAAAATGA

Protein sequence

MSVSQRQAWAENEANQLIKKYDRNGDGVLTKEELQSFFYDRSTQLNNTRFVSSKMISKTNNLVHKLSSSTHMNPQKQLRDKAQNSLTKVLDIKQSNASLSREQIKEIFKYHDSDKDGFLNIRDLTKAFGSLGSITPFYKAQYAMTYADADQDGLISEVELDKLVDYANKIIKKK

Homology

[Close]

BLAST of ClCG08G015790 vs. TrEMBL
Match: A0A0A0LRC8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G359950 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 1.4e-59
Identity = 127/177 (71.75%), Postives = 143/177 (80.79%), Query Frame = 1


Query: 1   MSVSQRQAWAENEANQLIKKYDRNGDGVLTKEELQSFFYDR--STQLNNTRFVSSKMISK 60
           MSVS  QAWA+NEAN+LIKKYDRNGDGVLTKEELQSF  D   STQLNN R VSS  + K
Sbjct: 1   MSVSHLQAWAKNEANELIKKYDRNGDGVLTKEELQSFLRDARGSTQLNNIRNVSSSTVPK 60

Query: 61  TN-NLVHKLSSSTHMNPQKQLRDKAQNSLTKVLDIKQSNASLSREQIKEIFKYHDSDKDG 120
           TN NL  K+SS+T + P+KQL DKAQ S       KQSN  LSREQIKEIFKYHDS+KDG
Sbjct: 61  TNENLAQKVSSNTCITPKKQLLDKAQGSS------KQSNVPLSREQIKEIFKYHDSNKDG 120

Query: 121 FLNIRDLTKAFGSLGSITPFYKAQYAMTYADADQDGLISEVELDKLVDYANKIIKKK 175
           FL+IR+LTKAF S+GSI PF KA+YAM YAD D+DGL+SE ELDKL+DYA+KIIKKK
Sbjct: 121 FLSIRELTKAFSSMGSIVPFCKARYAMAYADVDEDGLVSEAELDKLIDYAHKIIKKK 171

[Close]

BLAST of ClCG08G015790 vs. TrEMBL
Match: A0A0A0KMQ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G067410 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 2.5e-40
Identity = 95/177 (53.67%), Postives = 127/177 (71.75%), Query Frame = 1


Query: 1   MSVSQRQA-WAENEANQLIKKYDRNGDGVLTK--EELQSFFYDRSTQLNNTRFVSSKMIS 60
           M +S+ QA  A  EA+ LIK+Y++NGD V  K  ++++S     STQ+ N   V  K++ 
Sbjct: 1   MYISKLQASMAMYEASMLIKQYEKNGDAVKVKAFDDVRS-----STQIGNRESVL-KILK 60

Query: 61  KTNNLVHKLSSSTHMNPQKQLRDKAQNSLTKVLDIKQSNASLSREQIKEIFKYHDSDKDG 120
            ++ + HKL S  H+ P ++   K + S+T+VLD K SN SLSRE+IKEIF+YHD++ DG
Sbjct: 61  PSDGVAHKLRSEAHIQPTQRTGGKGKKSITRVLDRKSSNMSLSRERIKEIFQYHDNNNDG 120

Query: 121 FLNIRDLTKAFGSLGSITPFYKAQYAMTYADADQDGLISEVELDKLVDYANKIIKKK 175
           FLN  +LTKAF  LGS+ PFYKA Y M YADA++DGLISE ELDKL+DYA+KIIKKK
Sbjct: 121 FLNRMELTKAFAFLGSMFPFYKACYGMVYADANEDGLISEAELDKLIDYASKIIKKK 171

[Close]

BLAST of ClCG08G015790 vs. TrEMBL
Match: A0A0A0KLF3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G067670 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.6e-39
Identity = 88/168 (52.38%), Postives = 120/168 (71.43%), Query Frame = 1


Query: 10  AENEANQLIKKYDRNGDGVLTKEELQSFFYDR---STQLNNTRFVSSKMISKTNNLVHKL 69
           A+ EA++L+KKY++NG+GV+      S F D    STQ+N  R +++K +   +++ HKL
Sbjct: 38  AKYEASKLMKKYEQNGEGVIL-----SAFNDNARGSTQINTNREMATKKLKPNDDVAHKL 97

Query: 70  SSSTHMNPQKQLRDKAQNSLTKVLDIKQSNASLSREQIKEIFKYHDSDKDGFLNIRDLTK 129
           SS+  +    Q+R KAQ  + +V D K SN   SREQIKEIF+Y+DSD+DGFLNIR++TK
Sbjct: 98  SSNAQLKSNNQIRGKAQVPIKRVYDTKASNMQFSREQIKEIFQYYDSDRDGFLNIREVTK 157

Query: 130 AFGSLGSITPFYKAQYAMTYADADQDGLISEVELDKLVDYANKIIKKK 175
           AF  LGSI PF KA + M YAD ++DGLI E ELDKL++YANK +KKK
Sbjct: 158 AFALLGSIFPFNKAYHGMVYADTNKDGLIGEDELDKLINYANKFMKKK 200

[Close]

BLAST of ClCG08G015790 vs. TrEMBL
Match: A0A0A0KIY4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G068170 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 6.5e-36
Identity = 88/170 (51.76%), Postives = 122/170 (71.76%), Query Frame = 1


Query: 10  AENEANQLIKKYDRNGDGVLTKEELQSF--FYDRSTQLNNTRFVSSKMISKTNN--LVHK 69
           A+ EA++L+KK++ N +GV     L++F      ST++NN + +++++I K +N  + H 
Sbjct: 11  AKYEASKLMKKHENNDEGV----PLKAFNGIPPASTKINNKQAMATEIILKPSNHPVAHY 70

Query: 70  LSSSTHMNPQKQL-RDKAQNSLTKVLDIKQSNASLSREQIKEIFKYHDSDKDGFLNIRDL 129
           L+S+ +M P KQL   KAQ + T VLDIK SN   SREQIKEIF+YHDSD DGFLN+R++
Sbjct: 71  LTSNAYMIPSKQLGAGKAQVTTTSVLDIKASNMQFSREQIKEIFQYHDSDNDGFLNLREV 130

Query: 130 TKAFGSLGSITPFYKAQYAMTYADADQDGLISEVELDKLVDYANKIIKKK 175
           TKAF  LG+I P YKA + M YADA++DGLIS+ EL+KLVDYA K   K+
Sbjct: 131 TKAFAFLGTILPLYKAYHGMVYADANKDGLISKDELEKLVDYAYKFFNKR 176

[Close]

BLAST of ClCG08G015790 vs. TrEMBL
Match: A0A0A0LNG6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G359930 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 5.5e-19
Identity = 59/170 (34.71%), Postives = 89/170 (52.35%), Query Frame = 1


Query: 4   SQRQAWAENEANQLIKKYDRNGDGVLTKEELQSFFYDRSTQLNNTRFVSSKMISKTNNLV 63
           +Q    +E EA+ LIKKYD+NGD +LTK+EL +   +++   ++ +    K+  K N   
Sbjct: 13  AQGNYMSEQEASNLIKKYDKNGDSILTKDELTALIIEQAASHHHQQIKPQKVEPKVNIPD 72

Query: 64  HKLSSSTHMNPQKQLRDKAQNSLTKVLDIKQSNASLSREQIKEIFKYHDSDKDGFLNIRD 123
            K S   +                           LS+++++EIF  HD D DG+L   +
Sbjct: 73  EKASCGPY------------------------KMRLSKDEMREIFLEHDIDGDGYLTRSE 132

Query: 124 LTKAFGSLGSITPFYKAQYAMTYADADQDGLISEVELDKLVDYANKIIKK 174
           L KAF   GS   F KA YA+  ADA+ DG I   ELDK+++YA+++I K
Sbjct: 133 LVKAFNMCGSFNSFSKANYALNLADANGDGFICLDELDKVLEYADRVINK 158

[Close]

BLAST of ClCG08G015790 vs. TAIR10
Match: AT2G43290.1 (AT2G43290.1 Calcium-binding EF-hand family protein)

HSP 1 Score: 49.3 bits (116), Expect = 2.8e-06
Identity = 35/150 (23.33%), Postives = 68/150 (45.33%), Query Frame = 1


Query: 12  NEANQLIKKYDRNGDGVLTKEELQSFFYDRSTQLNNTRFVSSKMISKTNNLVHKLSSSTH 71
           +E  ++ + +D+NGDG +TKEEL        +  N   ++  K +++   ++HK+ ++  
Sbjct: 64  SELKRVFQMFDKNGDGRITKEEL------NDSLENLGIYIPDKDLTQ---MIHKIDANGD 123

Query: 72  MNPQKQLRDKAQNSLTKVLDIKQSNASLSREQIKEIFKYHDSDKDGFLNIRDLTKAFGSL 131
                   D+ ++  + ++D   ++     E +K+ F   D D DGF+ + +L     SL
Sbjct: 124 GCVD---IDEFESLYSSIVDEHHNDGETEEEDMKDAFNVFDQDGDGFITVEELKSVMASL 183

Query: 132 G--SITPFYKAQYAMTYADADQDGLISEVE 160
           G          +  +   DAD DG ++  E
Sbjct: 184 GLKQGKTLDGCKKMIMQVDADGDGRVNYKE 201

[Close]

BLAST of ClCG08G015790 vs. NCBI nr
Match: gi|449470190|ref|XP_004152801.1| (PREDICTED: probable calcium-binding protein CML11 [Cucumis sativus])

HSP 1 Score: 237.3 bits (604), Expect = 2.1e-59
Identity = 127/177 (71.75%), Postives = 143/177 (80.79%), Query Frame = 1


Query: 1   MSVSQRQAWAENEANQLIKKYDRNGDGVLTKEELQSFFYDR--STQLNNTRFVSSKMISK 60
           MSVS  QAWA+NEAN+LIKKYDRNGDGVLTKEELQSF  D   STQLNN R VSS  + K
Sbjct: 1   MSVSHLQAWAKNEANELIKKYDRNGDGVLTKEELQSFLRDARGSTQLNNIRNVSSSTVPK 60

Query: 61  TN-NLVHKLSSSTHMNPQKQLRDKAQNSLTKVLDIKQSNASLSREQIKEIFKYHDSDKDG 120
           TN NL  K+SS+T + P+KQL DKAQ S       KQSN  LSREQIKEIFKYHDS+KDG
Sbjct: 61  TNENLAQKVSSNTCITPKKQLLDKAQGSS------KQSNVPLSREQIKEIFKYHDSNKDG 120

Query: 121 FLNIRDLTKAFGSLGSITPFYKAQYAMTYADADQDGLISEVELDKLVDYANKIIKKK 175
           FL+IR+LTKAF S+GSI PF KA+YAM YAD D+DGL+SE ELDKL+DYA+KIIKKK
Sbjct: 121 FLSIRELTKAFSSMGSIVPFCKARYAMAYADVDEDGLVSEAELDKLIDYAHKIIKKK 171

[Close]

BLAST of ClCG08G015790 vs. NCBI nr
Match: gi|659089539|ref|XP_008445564.1| (PREDICTED: probable calcium-binding protein CML11 [Cucumis melo])

HSP 1 Score: 230.3 bits (586), Expect = 2.5e-57
Identity = 124/175 (70.86%), Postives = 142/175 (81.14%), Query Frame = 1


Query: 1   MSVSQRQAWAENEANQLIKKYDRNGDGVLTKEELQSFFYDRSTQLNNTRFVSSKMISKTN 60
           MSVS  QAWA+ EA++LIKKYDRNGDGVLTKEELQSF +D   +L N RFVSS  I KTN
Sbjct: 1   MSVSHLQAWAKIEASELIKKYDRNGDGVLTKEELQSFLHD--ARLKNIRFVSSSTIPKTN 60

Query: 61  -NLVHKLSSSTHMNPQKQLRDKAQNSLTKVLDIKQSNASLSREQIKEIFKYHDSDKDGFL 120
            NL  K+SS+T + P+KQL DKAQ+SL      +QSN  LSREQIKEIFKYHDS+KDGFL
Sbjct: 61  ENLDQKVSSNTRIKPKKQLLDKAQDSL------RQSNVPLSREQIKEIFKYHDSNKDGFL 120

Query: 121 NIRDLTKAFGSLGSITPFYKAQYAMTYADADQDGLISEVELDKLVDYANKIIKKK 175
           +IR+LTKAFGSLGSI PF KA++AM YAD D+DGLISE EL KL+DYA KIIKKK
Sbjct: 121 SIRELTKAFGSLGSIVPFAKARHAMAYADVDEDGLISEAELHKLIDYAEKIIKKK 167

[Close]

BLAST of ClCG08G015790 vs. NCBI nr
Match: gi|700194510|gb|KGN49687.1| (hypothetical protein Csa_5G067410 [Cucumis sativus])

HSP 1 Score: 173.3 bits (438), Expect = 3.7e-40
Identity = 95/177 (53.67%), Postives = 127/177 (71.75%), Query Frame = 1


Query: 1   MSVSQRQA-WAENEANQLIKKYDRNGDGVLTK--EELQSFFYDRSTQLNNTRFVSSKMIS 60
           M +S+ QA  A  EA+ LIK+Y++NGD V  K  ++++S     STQ+ N   V  K++ 
Sbjct: 1   MYISKLQASMAMYEASMLIKQYEKNGDAVKVKAFDDVRS-----STQIGNRESVL-KILK 60

Query: 61  KTNNLVHKLSSSTHMNPQKQLRDKAQNSLTKVLDIKQSNASLSREQIKEIFKYHDSDKDG 120
            ++ + HKL S  H+ P ++   K + S+T+VLD K SN SLSRE+IKEIF+YHD++ DG
Sbjct: 61  PSDGVAHKLRSEAHIQPTQRTGGKGKKSITRVLDRKSSNMSLSRERIKEIFQYHDNNNDG 120

Query: 121 FLNIRDLTKAFGSLGSITPFYKAQYAMTYADADQDGLISEVELDKLVDYANKIIKKK 175
           FLN  +LTKAF  LGS+ PFYKA Y M YADA++DGLISE ELDKL+DYA+KIIKKK
Sbjct: 121 FLNRMELTKAFAFLGSMFPFYKACYGMVYADANEDGLISEAELDKLIDYASKIIKKK 171

[Close]

BLAST of ClCG08G015790 vs. NCBI nr
Match: gi|700194512|gb|KGN49689.1| (hypothetical protein Csa_5G067670 [Cucumis sativus])

HSP 1 Score: 170.6 bits (431), Expect = 2.4e-39
Identity = 88/168 (52.38%), Postives = 120/168 (71.43%), Query Frame = 1


Query: 10  AENEANQLIKKYDRNGDGVLTKEELQSFFYDR---STQLNNTRFVSSKMISKTNNLVHKL 69
           A+ EA++L+KKY++NG+GV+      S F D    STQ+N  R +++K +   +++ HKL
Sbjct: 38  AKYEASKLMKKYEQNGEGVIL-----SAFNDNARGSTQINTNREMATKKLKPNDDVAHKL 97

Query: 70  SSSTHMNPQKQLRDKAQNSLTKVLDIKQSNASLSREQIKEIFKYHDSDKDGFLNIRDLTK 129
           SS+  +    Q+R KAQ  + +V D K SN   SREQIKEIF+Y+DSD+DGFLNIR++TK
Sbjct: 98  SSNAQLKSNNQIRGKAQVPIKRVYDTKASNMQFSREQIKEIFQYYDSDRDGFLNIREVTK 157

Query: 130 AFGSLGSITPFYKAQYAMTYADADQDGLISEVELDKLVDYANKIIKKK 175
           AF  LGSI PF KA + M YAD ++DGLI E ELDKL++YANK +KKK
Sbjct: 158 AFALLGSIFPFNKAYHGMVYADTNKDGLIGEDELDKLINYANKFMKKK 200

[Close]

BLAST of ClCG08G015790 vs. NCBI nr
Match: gi|700194513|gb|KGN49690.1| (hypothetical protein Csa_5G068170 [Cucumis sativus])

HSP 1 Score: 158.7 bits (400), Expect = 9.3e-36
Identity = 88/170 (51.76%), Postives = 122/170 (71.76%), Query Frame = 1


Query: 10  AENEANQLIKKYDRNGDGVLTKEELQSF--FYDRSTQLNNTRFVSSKMISKTNN--LVHK 69
           A+ EA++L+KK++ N +GV     L++F      ST++NN + +++++I K +N  + H 
Sbjct: 11  AKYEASKLMKKHENNDEGV----PLKAFNGIPPASTKINNKQAMATEIILKPSNHPVAHY 70

Query: 70  LSSSTHMNPQKQL-RDKAQNSLTKVLDIKQSNASLSREQIKEIFKYHDSDKDGFLNIRDL 129
           L+S+ +M P KQL   KAQ + T VLDIK SN   SREQIKEIF+YHDSD DGFLN+R++
Sbjct: 71  LTSNAYMIPSKQLGAGKAQVTTTSVLDIKASNMQFSREQIKEIFQYHDSDNDGFLNLREV 130

Query: 130 TKAFGSLGSITPFYKAQYAMTYADADQDGLISEVELDKLVDYANKIIKKK 175
           TKAF  LG+I P YKA + M YADA++DGLIS+ EL+KLVDYA K   K+
Sbjct: 131 TKAFAFLGTILPLYKAYHGMVYADANKDGLISKDELEKLVDYAYKFFNKR 176

The following BLAST results are available for this feature:

BLAST of ClCG08G015790 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LRC8_CUCSA	1.4e-59	71.75	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G359950 PE=4 SV=1	[more]
A0A0A0KMQ1_CUCSA	2.5e-40	53.67	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G067410 PE=4 SV=1	[more]
A0A0A0KLF3_CUCSA	1.6e-39	52.38	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G067670 PE=4 SV=1	[more]
A0A0A0KIY4_CUCSA	6.5e-36	51.76	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G068170 PE=4 SV=1	[more]
A0A0A0LNG6_CUCSA	5.5e-19	34.71	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G359930 PE=4 SV=1	[more]

BLAST of ClCG08G015790 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G43290.1	2.8e-06	23.33	Calcium-binding EF-hand family protein	[more]

BLAST of ClCG08G015790 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449470190\|ref\|XP_004152801.1\|	2.1e-59	71.75	PREDICTED: probable calcium-binding protein CML11 [Cucumis sativus]	[more]
gi\|659089539\|ref\|XP_008445564.1\|	2.5e-57	70.86	PREDICTED: probable calcium-binding protein CML11 [Cucumis melo]	[more]
gi\|700194510\|gb\|KGN49687.1\|	3.7e-40	53.67	hypothetical protein Csa_5G067410 [Cucumis sativus]	[more]
gi\|700194512\|gb\|KGN49689.1\|	2.4e-39	52.38	hypothetical protein Csa_5G067670 [Cucumis sativus]	[more]
gi\|700194513\|gb\|KGN49690.1\|	9.3e-36	51.76	hypothetical protein Csa_5G068170 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002048	EF_hand_dom
IPR011992	EF-hand-dom_pair
IPR018247	EF_Hand_1_Ca_BS

Vocabulary: **Molecular Function**
Term	Definition
GO:0005509	calcium ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005509	calcium ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG08G015790.1	ClCG08G015790.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	PFAM	PF13202	EF-hand_5	coord: 17..37 score: 5.
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 101..160 score: 4.
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 103..131 score: 0.75coord: 13..41 score: 0
IPR002048	EF-hand domain	PROFILE	PS50222	EF_HAND_2	coord: 9..44 score: 11.947coord: 139..170 score: 5.977coord: 99..134 score: 12
IPR011992	EF-hand domain pair	GENE3D	G3DSA:1.10.238.10		coord: 7..54 score: 3.1E-17coord: 104..165 score: 3.1
IPR011992	EF-hand domain pair	unknown	SSF47473	EF-hand	coord: 98..160 score: 2.19E-17coord: 11..54 score: 2.19
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 22..34 score: -coord: 112..124 score: -coord: 148..160 scor
None	No IPR available	PANTHER	PTHR10891	EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN	coord: 95..167 score: 1.8
None	No IPR available	PANTHER	PTHR10891:SF592	CALCIUM-BINDING PROTEIN CML38-RELATED	coord: 95..167 score: 1.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG08G015790	Csa4G639730	Cucumber (Chinese Long) v2	cuwcgB332
ClCG08G015790	MELO3C016745	Melon (DHL92) v3.5.1	mewcgB502
ClCG08G015790	MELO3C010876	Melon (DHL92) v3.5.1	mewcgB295
ClCG08G015790	Cla022560	Watermelon (97103) v1	wcgwmB400
ClCG08G015790	Cla97C08G159380	Watermelon (97103) v2	wcgwmbB336
ClCG08G015790	Bhi04G000303	Wax gourd	wcgwgoB612
ClCG08G015790	CSPI02G19260	Wild cucumber (PI 183967)	cpiwcgB172
ClCG08G015790	Cucsa.232790	Cucumber (Gy14) v1	cgywcgB407
ClCG08G015790	CmaCh12G005320	Cucurbita maxima (Rimu)	cmawcgB169
ClCG08G015790	CmoCh12G004750	Cucurbita moschata (Rifu)	cmowcgB161
ClCG08G015790	Lsi08G014600	Bottle gourd (USVL1VR-Ls)	lsiwcgB438
ClCG08G015790	Cp4.1LG07g05350	Cucurbita pepo (Zucchini)	cpewcgB748
ClCG08G015790	MELO3C010876.2	Melon (DHL92) v3.6.1	medwcgB288
ClCG08G015790	Carg11845	Silver-seed gourd	carwcgB0178
ClCG08G015790	Carg10597	Silver-seed gourd	carwcgB0752
ClCG08G015790	Carg08773	Silver-seed gourd	carwcgB0106
ClCG08G015790	CsaV3_2G027950	Cucumber (Chinese Long) v3	cucwcgB176

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG08G015790	Cucumber (Chinese Long) v3	cucwcgB350
ClCG08G015790	Watermelon (97103) v2	wcgwmbB327
ClCG08G015790	Wax gourd	wcgwgoB656
ClCG08G015790	Watermelon (Charleston Gray)	wcgwcgB138
ClCG08G015790	Watermelon (Charleston Gray)	wcgwcgB166
ClCG08G015790	Cucumber (Gy14) v1	cgywcgB195
ClCG08G015790	Cucumber (Gy14) v1	cgywcgB399
ClCG08G015790	Cucurbita maxima (Rimu)	cmawcgB029
ClCG08G015790	Cucurbita maxima (Rimu)	cmawcgB140
ClCG08G015790	Cucurbita maxima (Rimu)	cmawcgB434
ClCG08G015790	Cucurbita maxima (Rimu)	cmawcgB712
ClCG08G015790	Cucurbita moschata (Rifu)	cmowcgB023
ClCG08G015790	Cucurbita moschata (Rifu)	cmowcgB123
ClCG08G015790	Cucurbita moschata (Rifu)	cmowcgB435
ClCG08G015790	Cucurbita moschata (Rifu)	cmowcgB716
ClCG08G015790	Wild cucumber (PI 183967)	cpiwcgB350
ClCG08G015790	Wild cucumber (PI 183967)	cpiwcgB601
ClCG08G015790	Cucumber (Chinese Long) v2	cuwcgB169
ClCG08G015790	Cucumber (Chinese Long) v2	cuwcgB568
ClCG08G015790	Melon (DHL92) v3.5.1	mewcgB223
ClCG08G015790	Watermelon (97103) v1	wcgwmB412
ClCG08G015790	Watermelon (97103) v1	wcgwmB421
ClCG08G015790	Cucurbita pepo (Zucchini)	cpewcgB125
ClCG08G015790	Cucurbita pepo (Zucchini)	cpewcgB528
ClCG08G015790	Cucurbita pepo (Zucchini)	cpewcgB624
ClCG08G015790	Cucurbita pepo (Zucchini)	cpewcgB708
ClCG08G015790	Bottle gourd (USVL1VR-Ls)	lsiwcgB305
ClCG08G015790	Cucumber (Gy14) v2	cgybwcgB155
ClCG08G015790	Cucumber (Gy14) v2	cgybwcgB309
ClCG08G015790	Cucumber (Gy14) v2	cgybwcgB529
ClCG08G015790	Melon (DHL92) v3.6.1	medwcgB214
ClCG08G015790	Melon (DHL92) v3.6.1	medwcgB496