Cp4.1LG16g08000 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTTTGAAGAGGACGATGAGCAAGAGGTCGAGAAGTAGCGAGCCGAAGGTCGAGTTGAGAGTGAACCTGAACCGGTTGCCATCGCCAGCGACGTCGTCTTTGTCGGGGTCGGGGTCGTCGTCGGACATATCGGTGGAGAATTCGTGCTTGGGGTGGGAGGGGGGAGTGGAAGAAGAGATAATAACAAGATCCATGATGCTGGTGGGATGTCCGGGGTGCTTCATGTATGTGATGTTGACCGAGAAGAGCTCCCAATGCCCCAAATGCCACAACAATGTCTTCCTTGATTTCTTCAAGCACCAGCAGCAGCAGCAGCATCATGCCTAG ATGACTTTGAAGAGGACGATGAGCAAGAGGTCGAGAAGTAGCGAGCCGAAGGTCGAGTTGAGAGTGAACCTGAACCGGTTGCCATCGCCAGCGACGTCGTCTTTGTCGGGGTCGGGGTCGTCGTCGGACATATCGGTGGAGAATTCGTGCTTGGGGTGGGAGGGGGGAGTGGAAGAAGAGATAATAACAAGATCCATGATGCTGGTGGGATGTCCGGGGTGCTTCATGTATGTGATGTTGACCGAGAAGAGCTCCCAATGCCCCAAATGCCACAACAATGTCTTCCTTGATTTCTTCAAGCACCAGCAGCAGCAGCAGCATCATGCCTAG ATGACTTTGAAGAGGACGATGAGCAAGAGGTCGAGAAGTAGCGAGCCGAAGGTCGAGTTGAGAGTGAACCTGAACCGGTTGCCATCGCCAGCGACGTCGTCTTTGTCGGGGTCGGGGTCGTCGTCGGACATATCGGTGGAGAATTCGTGCTTGGGGTGGGAGGGGGGAGTGGAAGAAGAGATAATAACAAGATCCATGATGCTGGTGGGATGTCCGGGGTGCTTCATGTATGTGATGTTGACCGAGAAGAGCTCCCAATGCCCCAAATGCCACAACAATGTCTTCCTTGATTTCTTCAAGCACCAGCAGCAGCAGCAGCATCATGCCTAG MTLKRTMSKRSRSSEPKVELRVNLNRLPSPATSSLSGSGSSSDISVENSCLGWEGGVEEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCHNNVFLDFFKHQQQQQHHA
BLAST of Cp4.1LG16g08000 vs. TrEMBL
Match: A0A0A0KJX5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G425780 PE=4 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 1.5e-30 Identity = 84/113 (74.34%), Postives = 89/113 (78.76%), Query Frame = 1
BLAST of Cp4.1LG16g08000 vs. TrEMBL
Match: M4F180_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 1.6e-11 Identity = 45/94 (47.87%), Postives = 60/94 (63.83%), Query Frame = 1
BLAST of Cp4.1LG16g08000 vs. TrEMBL
Match: A0A078F242_BRANA (BnaA05g27460D protein OS=Brassica napus GN=BnaA05g27460D PE=4 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 2.0e-11 Identity = 45/94 (47.87%), Postives = 60/94 (63.83%), Query Frame = 1
BLAST of Cp4.1LG16g08000 vs. TrEMBL
Match: V7AGR8_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G097300g PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 3.5e-11 Identity = 49/105 (46.67%), Postives = 71/105 (67.62%), Query Frame = 1
BLAST of Cp4.1LG16g08000 vs. TrEMBL
Match: V4M909_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10021790mg PE=4 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 5.9e-11 Identity = 46/97 (47.42%), Postives = 64/97 (65.98%), Query Frame = 1
BLAST of Cp4.1LG16g08000 vs. TAIR10
Match: AT3G11600.1 (AT3G11600.1 unknown protein) HSP 1 Score: 74.7 bits (182), Expect = 3.9e-14 Identity = 43/95 (45.26%), Postives = 62/95 (65.26%), Query Frame = 1
BLAST of Cp4.1LG16g08000 vs. TAIR10
Match: AT5G06270.1 (AT5G06270.1 unknown protein) HSP 1 Score: 66.6 bits (161), Expect = 1.1e-11 Identity = 46/106 (43.40%), Postives = 60/106 (56.60%), Query Frame = 1
BLAST of Cp4.1LG16g08000 vs. TAIR10
Match: AT5G22270.1 (AT5G22270.1 unknown protein) HSP 1 Score: 52.0 bits (123), Expect = 2.7e-07 Identity = 34/80 (42.50%), Postives = 48/80 (60.00%), Query Frame = 1
BLAST of Cp4.1LG16g08000 vs. NCBI nr
Match: gi|700192837|gb|KGN48041.1| (hypothetical protein Csa_6G425780 [Cucumis sativus]) HSP 1 Score: 140.2 bits (352), Expect = 2.1e-30 Identity = 84/113 (74.34%), Postives = 89/113 (78.76%), Query Frame = 1
BLAST of Cp4.1LG16g08000 vs. NCBI nr
Match: gi|727583833|ref|XP_010464878.1| (PREDICTED: uncharacterized protein LOC104745369 [Camelina sativa]) HSP 1 Score: 79.3 bits (194), Expect = 4.5e-12 Identity = 47/99 (47.47%), Postives = 66/99 (66.67%), Query Frame = 1
BLAST of Cp4.1LG16g08000 vs. NCBI nr
Match: gi|727412775|ref|XP_010497482.1| (PREDICTED: uncharacterized protein LOC104774622 [Camelina sativa]) HSP 1 Score: 77.4 bits (189), Expect = 1.7e-11 Identity = 47/99 (47.47%), Postives = 65/99 (65.66%), Query Frame = 1
BLAST of Cp4.1LG16g08000 vs. NCBI nr
Match: gi|674924808|emb|CDY08510.1| (BnaA05g27460D [Brassica napus]) HSP 1 Score: 76.6 bits (187), Expect = 2.9e-11 Identity = 45/94 (47.87%), Postives = 60/94 (63.83%), Query Frame = 1
BLAST of Cp4.1LG16g08000 vs. NCBI nr
Match: gi|727631629|ref|XP_010486829.1| (PREDICTED: uncharacterized protein LOC104764917 [Camelina sativa]) HSP 1 Score: 76.3 bits (186), Expect = 3.8e-11 Identity = 45/99 (45.45%), Postives = 65/99 (65.66%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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