MELO3C014511 (gene) Melon (DHL92) v3.5.1

NameMELO3C014511
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionCoffea canephora DH200=94 genomic scaffold, scaffold_1200
Locationchr5 : 1809125 .. 1809902 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCCCTTTTCCCTCTCCCTTCATTTCTCCACTCCTTTCTTTTTCTTTTCAACTCACAAACCCTGTGTGTAGTAAGCCTCTCAGCTCATCTCTCACATGCATTCACTCCCTATAAGCGTCAATTTTTATTTATTTTTAACCCCTTTGTTTTTGGTTGTTAGAAAATGAGCAAGAGATCGAGAAGTAGCGAGGCAGAGGTGGAGTTGAGAGTGAACTTGAACCAGTCGCCTACAACTTCGTCTTCGTCTTCGTCGGTGAGCACATTTGGTGGATCGGGATCGGGATCTGGGGATTCGTGCTTGTCATGTGAAGGAGAAGATCAGCATGGTGGGAGATTGGAAGAGATAATAACAAGATCGATGATGTTGGTGGGATGTCCGGGGTGTTTCATGTATGTGATGCTGACAGAAAAGAGCTCCCAATGCCCAAAATGCAAGAACAACGTGTTTCTTGATTTCTTCAAGCAACAACCACAGCATCATGCCTAGTTACCCCAACATATCCAAATTATTATAATTAAGTACTCTTTTTCTTTTTCCTTTCTTATTTCTCATCACATTTCTTAACTTTAATTAGTCAAGTTGTTCTTTTTTTTTTTTCTTTTCCTTTTCTTTTCGGTATTTTGGTTGGTGTGAGATCTTATTATATATAAATTAAAATGTTGTCCACCATGAAACCTAGGATGGATTATTAACTTTCTGTATGAATTGGGCTGAAATTTTCAC

mRNA sequence

TTCCCTTTTCCCTCTCCCTTCATTTCTCCACTCCTTTCTTTTTCTTTTCAACTCACAAACCCTAAAATGAGCAAGAGATCGAGAAGTAGCGAGGCAGAGGTGGAGTTGAGAGTGAACTTGAACCAGTCGCCTACAACTTCGTCTTCGTCTTCGTCGGTGAGCACATTTGGTGGATCGGGATCGGGATCTGGGGATTCGTGCTTGTCATGTGAAGGAGAAGATCAGCATGGTGGGAGATTGGAAGAGATAATAACAAGATCGATGATGTTGGTGGGATGTCCGGGGTGTTTCATGTATGTGATGCTGACAGAAAAGAGCTCCCAATGCCCAAAATGCAAGAACAACGTGTTTCTTGATTTCTTCAAGCAACAACCACAGCATCATGCCTAGTTACCCCAACATATCCAAATTATTATAATTAAGTACTCTTTTTCTTTTTCCTTTCTTATTTCTCATCACATTTCTTAACTTTAATTAGTCAAGTTGTTCTTTTTTTTTTTTCTTTTCCTTTTCTTTTCGGTATTTTGGTTGGTGTGAGATCTTATTATATATAAATTAAAATGTTGTCCACCATGAAACCTAGGATGGATTATTAACTTTCTGTATGAATTGGGCTGAAATTTTCAC

Coding sequence (CDS)

ATGAGCAAGAGATCGAGAAGTAGCGAGGCAGAGGTGGAGTTGAGAGTGAACTTGAACCAGTCGCCTACAACTTCGTCTTCGTCTTCGTCGGTGAGCACATTTGGTGGATCGGGATCGGGATCTGGGGATTCGTGCTTGTCATGTGAAGGAGAAGATCAGCATGGTGGGAGATTGGAAGAGATAATAACAAGATCGATGATGTTGGTGGGATGTCCGGGGTGTTTCATGTATGTGATGCTGACAGAAAAGAGCTCCCAATGCCCAAAATGCAAGAACAACGTGTTTCTTGATTTCTTCAAGCAACAACCACAGCATCATGCCTAG

Protein sequence

MSKRSRSSEAEVELRVNLNQSPTTSSSSSSVSTFGGSGSGSGDSCLSCEGEDQHGGRLEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFLDFFKQQPQHHA*
BLAST of MELO3C014511 vs. TrEMBL
Match: A0A0A0KJX5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G425780 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 3.5e-46
Identity = 98/110 (89.09%), Postives = 101/110 (91.82%), Query Frame = 1

Query: 42  MSKRSRSSEAEVELRVNLNQSPTTSSSSSSVSTFGGSGSGS-----GDSCLSCEGEDQHG 101
           MSKRSRSSEAEVELRVNLN+SPT SSSSSSVSTF GSGSGS     G+SCLSCEGE +HG
Sbjct: 1   MSKRSRSSEAEVELRVNLNRSPTASSSSSSVSTFDGSGSGSSEISVGNSCLSCEGE-EHG 60

Query: 102 GRLEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFLDFFKQQPQH 147
           GRLEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFLDFFKQQP H
Sbjct: 61  GRLEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFLDFFKQQPHH 109

BLAST of MELO3C014511 vs. TrEMBL
Match: V7AGR8_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G097300g PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 3.0e-13
Identity = 46/104 (44.23%), Postives = 61/104 (58.65%), Query Frame = 1

Query: 42  MSKRSRSSEAEVELRVNLNQSPTTSSSSSSVSTFGGSGSGSG--DSCLSCEGEDQHGGRL 101
           M KR+RS   EV L ++  ++P +SS  SS S+     S      SC+SCE E+      
Sbjct: 1   MKKRARSPRLEVRLSLSPPRTPVSSSDPSSESSTSSQVSVQSLESSCVSCEVEE------ 60

Query: 102 EEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFLDFFKQQ 144
               TR+M+LVGCP C MYVML+E   +CPKCK+ V LDF K +
Sbjct: 61  ----TRAMLLVGCPRCLMYVMLSEVDPKCPKCKSTVLLDFLKNK 94

BLAST of MELO3C014511 vs. TrEMBL
Match: A0A151R2G4_CAJCA (Uncharacterized protein (Fragment) OS=Cajanus cajan GN=KK1_042134 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.5e-12
Identity = 43/85 (50.59%), Postives = 55/85 (64.71%), Query Frame = 1

Query: 61  QSPTTSSSSSSVSTFGGSGSGSGDSCLSCEGED--QHGGRLEEIITRSMMLVGCPGCFMY 120
           +SP ++ SSSS  ++       G S LS EGED  QH    E   T+ M LVGCP CFMY
Sbjct: 10  RSPVSTDSSSSSVSYSSKMPSEGISVLSSEGEDNVQHTNGPE---TKPMPLVGCPRCFMY 69

Query: 121 VMLTEKSSQCPKCKNNVFLDFFKQQ 144
           VML+E + +CPKCK+ VFL+FFK +
Sbjct: 70  VMLSEVNPKCPKCKSTVFLEFFKDE 91

BLAST of MELO3C014511 vs. TrEMBL
Match: A0A0S3SBW0_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.06G159200 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.9e-12
Identity = 47/111 (42.34%), Postives = 60/111 (54.05%), Query Frame = 1

Query: 42  MSKRSRSSEAEVELRVNLNQSPTTSSSSSSVSTFGGSGSGSGD---------SCLSCEGE 101
           MSKR+RS   EV    +LN SP  ++SS S S      S +           SC+SCE E
Sbjct: 1   MSKRARSPRLEV----SLNLSPPRAASSVSSSDLSSDSSSTSSQVSVQSLESSCVSCEAE 60

Query: 102 DQHGGRLEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFLDFFKQQ 144
           +          TR+M+LVGCP C MYVML+E   +CPKCK+ V LDF   +
Sbjct: 61  E----------TRAMLLVGCPRCLMYVMLSEVDPKCPKCKSTVLLDFLNNE 97

BLAST of MELO3C014511 vs. TrEMBL
Match: A0A0L9V640_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan08g133300 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.9e-12
Identity = 47/111 (42.34%), Postives = 60/111 (54.05%), Query Frame = 1

Query: 42  MSKRSRSSEAEVELRVNLNQSPTTSSSSSSVSTFGGSGSGSGD---------SCLSCEGE 101
           MSKR+RS   EV    +LN SP  ++SS S S      S +           SC+SCE E
Sbjct: 1   MSKRARSPRLEV----SLNLSPPRAASSVSSSDLSSDSSSTSSQVSVQSLESSCVSCEAE 60

Query: 102 DQHGGRLEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFLDFFKQQ 144
           +          TR+M+LVGCP C MYVML+E   +CPKCK+ V LDF   +
Sbjct: 61  E----------TRAMLLVGCPRCLMYVMLSEVDPKCPKCKSTVLLDFLNNE 97

BLAST of MELO3C014511 vs. TAIR10
Match: AT3G11600.1 (AT3G11600.1 unknown protein)

HSP 1 Score: 77.8 bits (190), Expect = 6.3e-15
Identity = 43/101 (42.57%), Postives = 62/101 (61.39%), Query Frame = 1

Query: 42  MSKRSRSSEAEVELRVNLNQSPTTSSSSSSVSTFGGSGSGSGDSCLSCEGEDQHGGRLEE 101
           MS+R+++   ++ELR+NL+  P+ +S  S V +   S + S  SC+S E   +      E
Sbjct: 1   MSRRNKNGP-KLELRLNLSPPPSQASQMSLVRSPNRSNTTSPSSCVSSETNQEEN----E 60

Query: 102 IITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFLDFFKQ 143
            IT SM+LVGCP C MYVML++   +CPKCK+ V LDF ++
Sbjct: 61  TIT-SMVLVGCPRCLMYVMLSDDDPKCPKCKSTVLLDFLQE 95

BLAST of MELO3C014511 vs. TAIR10
Match: AT5G06270.1 (AT5G06270.1 unknown protein)

HSP 1 Score: 67.0 bits (162), Expect = 1.1e-11
Identity = 42/100 (42.00%), Postives = 52/100 (52.00%), Query Frame = 1

Query: 49  SEAEVELRVNLNQSPTTSSSSSSVSTFGGSGSGSG----DSCLSCE-GEDQHGGRLEEII 108
           S    +L + LN SP TSS    V +   S + S      SC+S E  +D+   R     
Sbjct: 2   SRRSPKLELKLNLSPPTSSQRRMVRSPSRSATTSPTSPPSSCVSSEMNQDEPSVRYSTSP 61

Query: 109 -TRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFLDFFKQ 143
            T SM+LVGCP C MYVML+E   +CPKCK+ V LDF  +
Sbjct: 62  ETTSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHE 101

BLAST of MELO3C014511 vs. TAIR10
Match: AT5G22270.1 (AT5G22270.1 unknown protein)

HSP 1 Score: 50.1 bits (118), Expect = 1.4e-06
Identity = 31/95 (32.63%), Postives = 50/95 (52.63%), Query Frame = 1

Query: 46  SRSSEAEVELRVNLNQSPTTSSSSSSVSTFGGSGSGSGDSCLSCEGEDQHGGRLEEIITR 105
           ++ + + + L + LN SP+  SS  + S+       S   C     E+  GG  E    +
Sbjct: 2   NQEAASNLGLDLKLNISPSLDSSLLTESS-------SSSLC----SEEAEGGGGE---AK 61

Query: 106 SMMLVGCPGCFMYVMLT-EKSSQCPKCKNNVFLDF 140
           SM++VGCP C MY++ + E   +CP+C ++V LDF
Sbjct: 62  SMVVVGCPNCIMYIITSLENDPRCPRCNSHVLLDF 82

BLAST of MELO3C014511 vs. NCBI nr
Match: gi|700192837|gb|KGN48041.1| (hypothetical protein Csa_6G425780 [Cucumis sativus])

HSP 1 Score: 192.6 bits (488), Expect = 5.0e-46
Identity = 98/110 (89.09%), Postives = 101/110 (91.82%), Query Frame = 1

Query: 42  MSKRSRSSEAEVELRVNLNQSPTTSSSSSSVSTFGGSGSGS-----GDSCLSCEGEDQHG 101
           MSKRSRSSEAEVELRVNLN+SPT SSSSSSVSTF GSGSGS     G+SCLSCEGE +HG
Sbjct: 1   MSKRSRSSEAEVELRVNLNRSPTASSSSSSVSTFDGSGSGSSEISVGNSCLSCEGE-EHG 60

Query: 102 GRLEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFLDFFKQQPQH 147
           GRLEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFLDFFKQQP H
Sbjct: 61  GRLEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFLDFFKQQPHH 109

BLAST of MELO3C014511 vs. NCBI nr
Match: gi|593206576|ref|XP_007132476.1| (hypothetical protein PHAVU_011G097300g [Phaseolus vulgaris])

HSP 1 Score: 83.2 bits (204), Expect = 4.3e-13
Identity = 46/104 (44.23%), Postives = 61/104 (58.65%), Query Frame = 1

Query: 42  MSKRSRSSEAEVELRVNLNQSPTTSSSSSSVSTFGGSGSGSG--DSCLSCEGEDQHGGRL 101
           M KR+RS   EV L ++  ++P +SS  SS S+     S      SC+SCE E+      
Sbjct: 1   MKKRARSPRLEVRLSLSPPRTPVSSSDPSSESSTSSQVSVQSLESSCVSCEVEE------ 60

Query: 102 EEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFLDFFKQQ 144
               TR+M+LVGCP C MYVML+E   +CPKCK+ V LDF K +
Sbjct: 61  ----TRAMLLVGCPRCLMYVMLSEVDPKCPKCKSTVLLDFLKNK 94

BLAST of MELO3C014511 vs. NCBI nr
Match: gi|950938770|ref|XP_014523618.1| (PREDICTED: uncharacterized protein LOC106779913 [Vigna radiata var. radiata])

HSP 1 Score: 81.6 bits (200), Expect = 1.2e-12
Identity = 48/111 (43.24%), Postives = 60/111 (54.05%), Query Frame = 1

Query: 42  MSKRSRSSEAEVELRVNLNQSPTTSSSSSSVSTFGGSGSGSGD---------SCLSCEGE 101
           MSKR+RS   EV    +LN SP  ++SS S S      S S           SC+SCE E
Sbjct: 1   MSKRARSPRLEV----SLNLSPPRAASSVSSSDLSSDSSSSSSQVSVQSLESSCVSCEAE 60

Query: 102 DQHGGRLEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFLDFFKQQ 144
           +          TR+M+LVGCP C MYVML+E   +CPKCK+ V LDF   +
Sbjct: 61  E----------TRAMLLVGCPRCLMYVMLSEVDPKCPKCKSTVLLDFLNNE 97

BLAST of MELO3C014511 vs. NCBI nr
Match: gi|1012324768|gb|KYP36726.1| (hypothetical protein KK1_042134, partial [Cajanus cajan])

HSP 1 Score: 80.9 bits (198), Expect = 2.1e-12
Identity = 43/85 (50.59%), Postives = 55/85 (64.71%), Query Frame = 1

Query: 61  QSPTTSSSSSSVSTFGGSGSGSGDSCLSCEGED--QHGGRLEEIITRSMMLVGCPGCFMY 120
           +SP ++ SSSS  ++       G S LS EGED  QH    E   T+ M LVGCP CFMY
Sbjct: 10  RSPVSTDSSSSSVSYSSKMPSEGISVLSSEGEDNVQHTNGPE---TKPMPLVGCPRCFMY 69

Query: 121 VMLTEKSSQCPKCKNNVFLDFFKQQ 144
           VML+E + +CPKCK+ VFL+FFK +
Sbjct: 70  VMLSEVNPKCPKCKSTVFLEFFKDE 91

BLAST of MELO3C014511 vs. NCBI nr
Match: gi|920708509|gb|KOM50506.1| (hypothetical protein LR48_Vigan08g133300 [Vigna angularis])

HSP 1 Score: 80.5 bits (197), Expect = 2.8e-12
Identity = 47/111 (42.34%), Postives = 60/111 (54.05%), Query Frame = 1

Query: 42  MSKRSRSSEAEVELRVNLNQSPTTSSSSSSVSTFGGSGSGSGD---------SCLSCEGE 101
           MSKR+RS   EV    +LN SP  ++SS S S      S +           SC+SCE E
Sbjct: 1   MSKRARSPRLEV----SLNLSPPRAASSVSSSDLSSDSSSTSSQVSVQSLESSCVSCEAE 60

Query: 102 DQHGGRLEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFLDFFKQQ 144
           +          TR+M+LVGCP C MYVML+E   +CPKCK+ V LDF   +
Sbjct: 61  E----------TRAMLLVGCPRCLMYVMLSEVDPKCPKCKSTVLLDFLNNE 97

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KJX5_CUCSA3.5e-4689.09Uncharacterized protein OS=Cucumis sativus GN=Csa_6G425780 PE=4 SV=1[more]
V7AGR8_PHAVU3.0e-1344.23Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G097300g PE=4 SV=1[more]
A0A151R2G4_CAJCA1.5e-1250.59Uncharacterized protein (Fragment) OS=Cajanus cajan GN=KK1_042134 PE=4 SV=1[more]
A0A0S3SBW0_PHAAN1.9e-1242.34Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.06G159200 PE=... [more]
A0A0L9V640_PHAAN1.9e-1242.34Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan08g133300 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G11600.16.3e-1542.57 unknown protein[more]
AT5G06270.11.1e-1142.00 unknown protein[more]
AT5G22270.11.4e-0632.63 unknown protein[more]
Match NameE-valueIdentityDescription
gi|700192837|gb|KGN48041.1|5.0e-4689.09hypothetical protein Csa_6G425780 [Cucumis sativus][more]
gi|593206576|ref|XP_007132476.1|4.3e-1344.23hypothetical protein PHAVU_011G097300g [Phaseolus vulgaris][more]
gi|950938770|ref|XP_014523618.1|1.2e-1243.24PREDICTED: uncharacterized protein LOC106779913 [Vigna radiata var. radiata][more]
gi|1012324768|gb|KYP36726.1|2.1e-1250.59hypothetical protein KK1_042134, partial [Cajanus cajan][more]
gi|920708509|gb|KOM50506.1|2.8e-1242.34hypothetical protein LR48_Vigan08g133300 [Vigna angularis][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C014511T2MELO3C014511T2mRNA
MELO3C014511T1MELO3C014511T1mRNA


Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33177FAMILY NOT NAMEDcoord: 19..99
score: 9.6

The following gene(s) are paralogous to this gene:

None