Cucsa.185820 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTCCTTTTTTTCTTTTtCAAATCACAAACCCTGTGCTGTGTAAGCCTCTCTCATCTCTCACATGCATTCCTACAAGTGTCAATAAGTTTTCATTATTTGTTAACTTTtGTTTTtGGTTTTTAGAAAATGAGCAAGAGATCGAGAAGTAGCGAGGCAGAGGTGGAGTTGAGAGTGAACTTGAACCGGTCACCTACGGCTTCGTCTTCGTCTTCGTCGGTGAGCACGTTTGATGGATCAGGATCGGGGTCGTCAGAGATATCAGTGGGGAATTCGTGCTTGTCATGTGAAGGAGAAGAGCATGGTGGGAGATTGGAAGAGATTATAACAAGATCAATGATGTTGGTGGGATGTCCAGGGTGTTTCATGTATGTGATGCTGACAGAAAAGAGCTCTCAATGCCCAAAATGCAAGAACAACGTGTTTCTTGATTTCTTCAAGCAACAACCACATCATGCCTAGTTACCCCAACATATCCAAATTATTATTAGTTACTATAATTAAGTACTCTTTTTCTTCTCTCTTTCTTTCTTTCTTATTTCTCATCAAATTTCTTAACTTTAATTAGTCAAGTTGTTTTTCTTTTCTTTTCTTTTTGGCATTTTGGTTGGTGTGAGATCTTATTATATATAAATTAAAATGTCGTCGACCATGAAACCTAGGATGGATTATTAACTTTTTGTATGATGAATTGGCTGAAATTTTCACTTTAATTTCTCT ATTCCTTTTTTTCTTTTTCAAATCACAAACCCTGTGCTGTAAAATGAGCAAGAGATCGAGAAGTAGCGAGGCAGAGGTGGAGTTGAGAGTGAACTTGAACCGGTCACCTACGGCTTCGTCTTCGTCTTCGTCGGTGAGCACGTTTGATGGATCAGGATCGGGGTCGTCAGAGATATCAGTGGGGAATTCGTGCTTGTCATGTGAAGGAGAAGAGCATGGTGGGAGATTGGAAGAGATTATAACAAGATCAATGATGTTGGTGGGATGTCCAGGGTGTTTCATGTATGTGATGCTGACAGAAAAGAGCTCTCAATGCCCAAAATGCAAGAACAACGTGTTTCTTGATTTCTTCAAGCAACAACCACATCATGCCTAGTTACCCCAACATATCCAAATTATTATTAGTTACTATAATTAAGTACTCTttttcttctctctttctttctttcttatttctcatcaaatttcttaactttaattagtcaagttgtttttcttttcttttcttttTGGCATTTTGGTTGGTGTGAGATCttattatatataaattaaaatGTCGTCGACCATGAAACCTAGGATGGATTATTAACTTTTTGTATGATGAATTGGCTGAAATTTTCACTTTAATTTCTCT ATGAGCAAGAGATCGAGAAGTAGCGAGGCAGAGGTGGAGTTGAGAGTGAACTTGAACCGGTCACCTACGGCTTCGTCTTCGTCTTCGTCGGTGAGCACGTTTGATGGATCAGGATCGGGGTCGTCAGAGATATCAGTGGGGAATTCGTGCTTGTCATGTGAAGGAGAAGAGCATGGTGGGAGATTGGAAGAGATTATAACAAGATCAATGATGTTGGTGGGATGTCCAGGGTGTTTCATGTATGTGATGCTGACAGAAAAGAGCTCTCAATGCCCAAAATGCAAGAACAACGTGTTTCTTGATTTCTTCAAGCAACAACCACATCATGCCTAG MSKRSRSSEAEVELRVNLNRSPTASSSSSSVSTFDGSGSGSSEISVGNSCLSCEGEEHGGRLEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFLDFFKQQPHHA*
BLAST of Cucsa.185820 vs. TrEMBL
Match: A0A0A0KJX5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G425780 PE=4 SV=1) HSP 1 Score: 224.9 bits (572), Expect = 4.7e-56 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 1
BLAST of Cucsa.185820 vs. TrEMBL
Match: A0A0S3SBW0_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.06G159200 PE=4 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 1.4e-15 Identity = 52/112 (46.43%), Postives = 68/112 (60.71%), Query Frame = 1
BLAST of Cucsa.185820 vs. TrEMBL
Match: A0A0L9V640_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan08g133300 PE=4 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 1.4e-15 Identity = 52/112 (46.43%), Postives = 68/112 (60.71%), Query Frame = 1
BLAST of Cucsa.185820 vs. TrEMBL
Match: V7AGR8_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G097300g PE=4 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 4.0e-15 Identity = 50/106 (47.17%), Postives = 66/106 (62.26%), Query Frame = 1
BLAST of Cucsa.185820 vs. TrEMBL
Match: A0A0B2QLW3_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_006658 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 1.1e-12 Identity = 48/115 (41.74%), Postives = 72/115 (62.61%), Query Frame = 1
BLAST of Cucsa.185820 vs. TAIR10
Match: AT3G11600.1 (AT3G11600.1 unknown protein) HSP 1 Score: 72.0 bits (175), Expect = 2.6e-13 Identity = 43/105 (40.95%), Postives = 66/105 (62.86%), Query Frame = 1
BLAST of Cucsa.185820 vs. TAIR10
Match: AT5G06270.1 (AT5G06270.1 unknown protein) HSP 1 Score: 67.0 bits (162), Expect = 8.3e-12 Identity = 41/106 (38.68%), Postives = 56/106 (52.83%), Query Frame = 1
BLAST of Cucsa.185820 vs. TAIR10
Match: AT5G22270.1 (AT5G22270.1 unknown protein) HSP 1 Score: 50.8 bits (120), Expect = 6.2e-07 Identity = 25/63 (39.68%), Postives = 38/63 (60.32%), Query Frame = 1
BLAST of Cucsa.185820 vs. TAIR10
Match: AT3G52561.1 (AT3G52561.1 unknown protein) HSP 1 Score: 47.8 bits (112), Expect = 5.2e-06 Identity = 27/80 (33.75%), Postives = 43/80 (53.75%), Query Frame = 1
BLAST of Cucsa.185820 vs. NCBI nr
Match: gi|700192837|gb|KGN48041.1| (hypothetical protein Csa_6G425780 [Cucumis sativus]) HSP 1 Score: 224.9 bits (572), Expect = 6.7e-56 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 1
BLAST of Cucsa.185820 vs. NCBI nr
Match: gi|950938770|ref|XP_014523618.1| (PREDICTED: uncharacterized protein LOC106779913 [Vigna radiata var. radiata]) HSP 1 Score: 91.3 bits (225), Expect = 1.2e-15 Identity = 52/112 (46.43%), Postives = 68/112 (60.71%), Query Frame = 1
BLAST of Cucsa.185820 vs. NCBI nr
Match: gi|920708509|gb|KOM50506.1| (hypothetical protein LR48_Vigan08g133300 [Vigna angularis]) HSP 1 Score: 90.5 bits (223), Expect = 2.0e-15 Identity = 52/112 (46.43%), Postives = 68/112 (60.71%), Query Frame = 1
BLAST of Cucsa.185820 vs. NCBI nr
Match: gi|593206576|ref|XP_007132476.1| (hypothetical protein PHAVU_011G097300g [Phaseolus vulgaris]) HSP 1 Score: 89.0 bits (219), Expect = 5.8e-15 Identity = 50/106 (47.17%), Postives = 66/106 (62.26%), Query Frame = 1
BLAST of Cucsa.185820 vs. NCBI nr
Match: gi|571492791|ref|XP_006592350.1| (PREDICTED: uncharacterized protein LOC102667525 [Glycine max]) HSP 1 Score: 80.9 bits (198), Expect = 1.6e-12 Identity = 48/115 (41.74%), Postives = 72/115 (62.61%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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