CmaCh20G001550 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh20G001550
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionGb|AAF02129.1
LocationCma_Chr20 : 764707 .. 769315 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTATTGGCCGTGGATAAAAATATTCCACCAAGCATGAAATGTAATTCTCCTACCAAGGTAGGTTTTTCTGTTCCTCGAAGATGAGAGGGATGTACGATTTAAATTTAATGATAATCTTGGTTTATCATTAATTTCTCCTAGTAACTATCGGCACTATTTAGGCTCAATTTGCAACCTTAGTCCCCAAGTTTGGGGGGGTGGGGTCCCTGATCTCTAGCTCTCTTTATATTATTATTTTTATCTACAATTTGAATAAATATTAGAAAAACTAGCATGAGGGATGGTGAGCCAATTGAGCAGAGATGAACTCATTTAGATTCTCTACAATGGTATGATATTGTTTATTTTGAACATAAGCTCTCATTGTCGGACTCCCTCCCAACAATCCTCAACAATCATTCCCTCGATCAAAGTACACCACAAAACCTCTCCTGAGCCCTATGTAGCCCTCAAACGACCTCTCCTTAATCAAGGTTCGACCTCTTTCTTTGGAACCCTCAAACAAAGTACACCATTTGTTCGATACTTGAGTCACTTTTGACTACACATTCGAGGCTACCAACTTCTTTGTTGACACTTGAGGATTCAATTAGTATGGCTAAGTTAAGGGCATGACTCTGATACCATGTTAGGATCTTCACAATTGTATGATATTGTTCACTTTCAGCATAAGCTTTCATAGTTTTGCTTTTGGTTTCCTCGTAAGGCCTCGTACCAATGAAGATGTATTCATTATTTATAAACCCATGATCATCTCCTTAACTAGCCAACGTTGGACTCCCTCCCAACAATCCTCAACAATATGTACTATCGACTAAGAAGTCGAAAGTTTGAATGTCTACCATACACATTCTAGAACTAGAAAGCATGAAGAATCAACCAATTATGATCAGCAACATTGCTGTAAATTTCATTTTCTTCCAATTTTAGGGCCTAAAGGCATATATTTCTGTCCGTAGGCTTACAAGTATGATACCTTTATCTATGTTTCCATTAAAATGCCGTTATATCTTGGTGAGACATTCATTTCTATTACCATTTTGTCAAAGTAAAATTATTGTACCCTCCTATTTTACTAGCCTTGTGTGTCTTCCTTCTAGAAACATATTCTGGTCCTTTTTTTTTATTTTTTAATTTCATCTTTTAACTGTTTAAGATTGTTTTATCAATTTGTGTCTTATTATTCTTTTTATCAAATGTCTACTCTCACTAAATGTTTTGATAAAACTAATATGTGAATTGAACTGGGTATGTTTTTTTGGGTGCCAATTGTTAGTAGAATATCTTTCTCAAGGGTTCCATCACCTATGCCACCGAGTCATTTGGTGTTGGGTAAGTTAATCTACCTCATGTCATATAAAATGGATTATGTTCAATTTTATAGGTTGGAATATCTGAAGATAGTTCAAGTAATTAGCCTATCATATCATTTACGAAAAGCTGGAAATTTGGTATTAAGAAGGGCATGTTTGCCTCATCAAGTGACCAAAGTTATTTGTTGTACCTAATTGGTGTCATTTTTCTATAGTTATGGTAGGCAATTAACTCGTTTTACTGAGTTATACTAATATATATTTTTTTTATCGTGTATAAGCGGGAATCTTGGGATATTTTACCCAAACTGATTCGTTAGCCAAGTCAAGTTTCTCCTAACTTAGCTTCCTGTGATCGTAAATTAGGTAATTGTCACATCTTTTTCATTAAGTTGTTCAAAAATATGCATTAGGTCTTATGATTGATTTTTCAATGTACATAACAAATGTATGCATGAACATCATATTCATCGTATAGTATAAGATGTAACGCATATAACACCGTGTAAATAACTTGGAGACCAGAGATTAAAAATGCCGAAGTCGGTCAACCGTGTAAATAAAGTTGAGTAGGGAAAATTGTTTTAGGATTTATATTAATGGTGGGCATAGAAATCCTGGAACAAAGATTTTCATTTTCCTAAAACAAAGATTTATTTTAATGTGGAGGCTTTGGAGGGAATACCAAACTCCAATTTTCTTGGTGTGGAATATGGACGACCATCACATTATTGATTTTTTCGAAATACAATGTTAGTCAACGTGACACCCACTGACCTACCCATCACTTAGTTTTTTTTCTTTTTCCGTTAACTTAGTGGGGCCTTTAAAGCCACCTCTAGCTTAGATTCATAAGTTATTCTATTCGACACTATTATTGATTAGAATATGTCACGCTTCAATTTCAACGACACATTACATTATTATTTGTCACAGTTTATATCTATTTATTCTCATAGAATCAAACATTCTAAGTCTCAACGACTGTACTTATGGTAGTACAAAATATATTAGTTAATTTAACATATGTGAAATTTTACCATCTCTCATACCTATTATTATTTTTCTTTTAAAAATATTTTTAAAAAATGGTCGGTTTGAAACTAATTAAGAAAATATAATTTTATAAAACATATTCATTTTAGAATTTTACTGAGAATTTGACACTTTTGAAAGCCAATGAATAAATTTAAATTTTAGAGGTATATTATACTTAATTCTTAGAATTAAATTCCAAGTTATTGGAGATTGGACCACCATGCATATTTAATCTTAAAGTCTTCGCAAGTTAAGCTATTCACGTCCTTATGTCGGCTAAATTCAAGTTATTTATATATATATATATGAATAAAAATAGAAAGTAATAATTAAATGCAAGAAACAATTAGATGAGAATTATGAGAGGAGCGTAATTAATAATTTATGGAGAGTGGAAAATATGAATAATTAATTGCTACTTCAACCACCCACCACCTACCATAGCAAATATGATATAGCATACATTTGGATACGGTTCATAAAAACGTATCCAATTATTCACAATATTCCCCTCTACTATCTTACCCCTTCAATAATTTAATCCACCTCTTTCACTCTCTCCTATAAATTCAATATTTTTACTATTTAATTAAAATTATATATTTTAATTAGCCAAATTCTACTCAATAATTCGTGGGATCTTAAATATTAAAATATTTTAAGTCATGTTAAATATATCCGAATAAATAAATTCATTGTTTTTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGACATTTATTTGCGCACAGTAAACTGAACAGTGTAGGGATAATTACTAATGTCTTCGGATATCTTTATCTTACGTGATTTTTGTATTTAAAAAAAAAAAAAAACCTAAATAAAATTTATATCATGATTTAAGAAAAACGTCACATTACATTATTTTTGTTATTGATTTGAATAAATTGATTTGAGACTGGGGACCAATCATTATAATTAGGGTTTAGCCTGGTATTCAATCTAGGCATGTTTCTTACCATTTAAACGCTAATTTTGCTTTTGTTTATGTAATTTTGACTCTCAAATTTTTATAACACGTATATTATCGTCTAAGATAAATATCATAATTGTATCACTCAAGCTAAGATAAATATTGTCCGTTTTGACCCGTTACGTGCGGCTGTCAGCTTCACGATTTTAAAACACGTATATTATCGAGAGGTTTCCACACCCTTGTAAGGAATGCTTTGTTTCACTCTCTATGAGGTCTCATAATAGTCCACTTAAAATTGAAAGGTTCGGATCTTAACAAGATTAAAAATTTGAATATACACGGAGACGATTAAAAATTCATAGATGTAACAGCACAAACTTACCTCTAGTAGATATTGTCTACTCTTCTATAAAGAGGTTTTCACGCCCTTCTAAAGAATGTTTGGTTACACTCTCAACCAATGTAGGGTCTCACAATAGTCCACTTAAAATTAAAAGGTTCGAGTCTTATCCGACACAAAGTTGACTAAAACTTTAGAAATGTGAAGAGGGAATAGGGTTAGGACATTGATATTGAAAGAGGGTCGTCTATAGTTATATAATTGAACATCAATAATAATAATAATAATAATAATAATAACAATAATGATGTGGTGAATGAATTAACTTCCAAGGGCCCCTCTCTTATTCTCATTATTCTTATTATTATTATTATTTAGTTAGGTTGGAATTCCCATATAATATCCTCACCCCTCATATCAAACCTCACTCAGTCAGTCAGTCACCCACAAATTCATCCGTCCTTTCTTCATTCTCTAAACTCCAATTTCCCTAACAAACCAAACTTGGTAAGCCTCTCTCACAGTCACACTGCGTAACCCTCTCTGATAAACTCATGTTCATTTGTTTTTCTTTTTTTGTTTTTTTTGCATGACTTTGAAGAGGACGATGAGCAAGAGGTCGAGGAGTAGCGAGCCGAAGGTCGAGTTGAGAGTGAACCTGAACCGGTTGCCATCGCCAGCGACGTCGTCTTTGTCGGGGTCGGGATCGTCGTCGGACATATCAGTGGAGAATTCGTGCTTGGGGTGGGAGGGGGGAGTGGAAGAAGAGATAATAACAAGATCCATGATGCTGGTGGGATGTCCGGGGTGCTTCATGTATGTCATGTTGACCGAGAAGAGCTCCCAATGCCCCAAATGCCACAACAACGTCTTCCTTGATTTCTTCAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCATCATGCCTAGCCAAGCCACACCGCC

mRNA sequence

ATGTTATTGGCCGTGGATAAAAATATTCCACCAAGCATGAAATGTAATTCTCCTACCAAGTCAGTCAGTCACCCACAAATTCATCCGTCCTTTCTTCATTCTCTAAACTCCAATTTCCCTAACAAACCAAACTTGAGGACGATGAGCAAGAGGTCGAGGAGTAGCGAGCCGAAGGTCGAGTTGAGAGTGAACCTGAACCGGTTGCCATCGCCAGCGACGTCGTCTTTGTCGGGGTCGGGATCGTCGTCGGACATATCAGTGGAGAATTCGTGCTTGGGGTGGGAGGGGGGAGTGGAAGAAGAGATAATAACAAGATCCATGATGCTGGTGGGATGTCCGGGGTGCTTCATGTATGTCATGTTGACCGAGAAGAGCTCCCAATGCCCCAAATGCCACAACAACGTCTTCCTTGATTTCTTCAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCATCATGCCTAGCCAAGCCACACCGCC

Coding sequence (CDS)

ATGTTATTGGCCGTGGATAAAAATATTCCACCAAGCATGAAATGTAATTCTCCTACCAAGTCAGTCAGTCACCCACAAATTCATCCGTCCTTTCTTCATTCTCTAAACTCCAATTTCCCTAACAAACCAAACTTGAGGACGATGAGCAAGAGGTCGAGGAGTAGCGAGCCGAAGGTCGAGTTGAGAGTGAACCTGAACCGGTTGCCATCGCCAGCGACGTCGTCTTTGTCGGGGTCGGGATCGTCGTCGGACATATCAGTGGAGAATTCGTGCTTGGGGTGGGAGGGGGGAGTGGAAGAAGAGATAATAACAAGATCCATGATGCTGGTGGGATGTCCGGGGTGCTTCATGTATGTCATGTTGACCGAGAAGAGCTCCCAATGCCCCAAATGCCACAACAACGTCTTCCTTGATTTCTTCAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCATCATGCCTAG

Protein sequence

MLLAVDKNIPPSMKCNSPTKSVSHPQIHPSFLHSLNSNFPNKPNLRTMSKRSRSSEPKVELRVNLNRLPSPATSSLSGSGSSSDISVENSCLGWEGGVEEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCHNNVFLDFFKQQQQQQQQQHHA
Homology
[Close]
BLAST of CmaCh20G001550 vs. TrEMBL
Match: A0A0A0KJX5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G425780 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 8.0e-30
Identity = 84/116 (72.41%), Postives = 89/116 (76.72%), Query Frame = 1 

Query: 48  MSKRSRSSEPKVELRVNLNRLPSPATSSLS-----GSGS-SSDISVENSCLGWEG----G 107
           MSKRSRSSE +VELRVNLNR P+ ++SS S     GSGS SS+ISV NSCL  EG    G
Sbjct: 1   MSKRSRSSEAEVELRVNLNRSPTASSSSSSVSTFDGSGSGSSEISVGNSCLSCEGEEHGG 60

Query: 108 VEEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCHNNVFLDFFKQQQQQQQQQHHA 154
             EEIITRSMMLVGCPGCFMYVMLTEKSSQCPKC NNVFLDFFK      QQ HHA
Sbjct: 61  RLEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFLDFFK------QQPHHA 110

[Close]
BLAST of CmaCh20G001550 vs. TrEMBL
Match: M4F180_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 2.2e-11
Identity = 45/96 (46.88%), Postives = 61/96 (63.54%), Query Frame = 1 

Query: 48  MSKRSRSSEPKVELRVNLNRLPSPATS-SLSGSGSSSDISVENSCLGWEGGVEEEIITRS 107
           MS+R+RS  PK+EL++NL+  PS     S+  S S S+ +  NSC+  E   EE     S
Sbjct: 1   MSRRNRSG-PKLELKLNLSPSPSQGEQMSMVRSPSRSNTASPNSCVSSEPSQEEMETPIS 60

Query: 108 MMLVGCPGCFMYVMLTEKSSQCPKCHNNVFLDFFKQ 143
           M+LVGCP C MYVML++   +CPKC + V LDFF +
Sbjct: 61  MVLVGCPRCLMYVMLSQDEPKCPKCKSTVLLDFFHE 95

[Close]
BLAST of CmaCh20G001550 vs. TrEMBL
Match: V4M909_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10021790mg PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 2.9e-11
Identity = 45/96 (46.88%), Postives = 63/96 (65.62%), Query Frame = 1 

Query: 48  MSKRSRSSEPKVELRVNLNRLPSPATS-SLSGSGSSSDISVENSCLGWEGGVEEEIITRS 107
           MS+R+ S+ PK+EL++NL+  PS A+  SL  S + S+ +  +SC+  E   EE   T S
Sbjct: 1   MSRRN-SNWPKLELKLNLSPPPSQASQMSLVRSPTRSNTTSPSSCVSSESNQEEMETTTS 60

Query: 108 MMLVGCPGCFMYVMLTEKSSQCPKCHNNVFLDFFKQ 143
           M+LVGCP C MYVML++   +CPKC + V LDF  Q
Sbjct: 61  MVLVGCPRCLMYVMLSQDDPKCPKCKSTVLLDFLHQ 95

[Close]
BLAST of CmaCh20G001550 vs. TrEMBL
Match: A0A078F242_BRANA (BnaA05g27460D protein OS=Brassica napus GN=BnaA05g27460D PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 2.9e-11
Identity = 45/96 (46.88%), Postives = 61/96 (63.54%), Query Frame = 1 

Query: 48  MSKRSRSSEPKVELRVNLNRLPSPATS-SLSGSGSSSDISVENSCLGWEGGVEEEIITRS 107
           MS+R+RS  PK+EL++NL+  PS     S+  S S S+ +  NSC+  E   EE     S
Sbjct: 1   MSRRNRSG-PKLELKLNLSPPPSQGEQMSMVRSPSRSNTASPNSCVSSEPSQEEMETPIS 60

Query: 108 MMLVGCPGCFMYVMLTEKSSQCPKCHNNVFLDFFKQ 143
           M+LVGCP C MYVML++   +CPKC + V LDFF +
Sbjct: 61  MVLVGCPRCLMYVMLSQDEPKCPKCKSTVLLDFFHE 95

[Close]
BLAST of CmaCh20G001550 vs. TrEMBL
Match: R0HZX7_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10014943mg PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 3.7e-11
Identity = 46/98 (46.94%), Postives = 65/98 (66.33%), Query Frame = 1 

Query: 48  MSKRSRSSEPKVELRVNLNRLPSPATS-SLSGSGSSSDISVENSCLGWEGGVEEEI--IT 107
           MS+R+++  PK+ELR+N++  PS A+  SL  S + S+ +  +SC+  E   E+EI   T
Sbjct: 1   MSRRNKNG-PKLELRLNISPPPSQASQMSLVLSPTRSNTTSPSSCVSSETNQEDEIDTTT 60

Query: 108 RSMMLVGCPGCFMYVMLTEKSSQCPKCHNNVFLDFFKQ 143
            SM+LVGCP C MYVML+E   +CPKC + V LDF  Q
Sbjct: 61  TSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHQ 97

[Close]
BLAST of CmaCh20G001550 vs. TAIR10
Match: AT3G11600.1 (AT3G11600.1 unknown protein)

HSP 1 Score: 75.5 bits (184), Expect = 3.2e-14
Identity = 43/96 (44.79%), Postives = 63/96 (65.62%), Query Frame = 1 

Query: 48  MSKRSRSSEPKVELRVNLNRLPSPATS-SLSGSGSSSDISVENSCLGWEGGVEEEIITRS 107
           MS+R+++  PK+ELR+NL+  PS A+  SL  S + S+ +  +SC+  E   EE     S
Sbjct: 1   MSRRNKNG-PKLELRLNLSPPPSQASQMSLVRSPNRSNTTSPSSCVSSETNQEENETITS 60

Query: 108 MMLVGCPGCFMYVMLTEKSSQCPKCHNNVFLDFFKQ 143
           M+LVGCP C MYVML++   +CPKC + V LDF ++
Sbjct: 61  MVLVGCPRCLMYVMLSDDDPKCPKCKSTVLLDFLQE 95

[Close]
BLAST of CmaCh20G001550 vs. TAIR10
Match: AT5G06270.1 (AT5G06270.1 unknown protein)

HSP 1 Score: 66.6 bits (161), Expect = 1.5e-11
Identity = 46/109 (42.20%), Postives = 61/109 (55.96%), Query Frame = 1 

Query: 48  MSKRSRSSEPKVELRVNLNRLPSPATSSL-------SGSGSSSDISVENSCLGWEGGVEE 107
           MS+RS    PK+EL++NL    SP TSS        S S ++S  S  +SC+  E   +E
Sbjct: 1   MSRRS----PKLELKLNL----SPPTSSQRRMVRSPSRSATTSPTSPPSSCVSSEMNQDE 60

Query: 108 EII-------TRSMMLVGCPGCFMYVMLTEKSSQCPKCHNNVFLDFFKQ 143
             +       T SM+LVGCP C MYVML+E   +CPKC + V LDF  +
Sbjct: 61  PSVRYSTSPETTSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHE 101

[Close]
BLAST of CmaCh20G001550 vs. TAIR10
Match: AT5G22270.1 (AT5G22270.1 unknown protein)

HSP 1 Score: 52.0 bits (123), Expect = 3.8e-07
Identity = 34/80 (42.50%), Postives = 48/80 (60.00%), Query Frame = 1 

Query: 61  LRVNLNRLPSPATSSLSGSGSSSDISVENSCLGWEGGVEEEIITRSMMLVGCPGCFMYVM 120
           L + LN  PS  +S L+ S SSS  S E      EGG  E    +SM++VGCP C MY++
Sbjct: 11  LDLKLNISPSLDSSLLTESSSSSLCSEEA-----EGGGGE---AKSMVVVGCPNCIMYII 70

Query: 121 LT-EKSSQCPKCHNNVFLDF 140
            + E   +CP+C+++V LDF
Sbjct: 71  TSLENDPRCPRCNSHVLLDF 82

[Close]
BLAST of CmaCh20G001550 vs. NCBI nr
Match: gi|700192837|gb|KGN48041.1| (hypothetical protein Csa_6G425780 [Cucumis sativus])

HSP 1 Score: 138.3 bits (347), Expect = 1.1e-29
Identity = 84/116 (72.41%), Postives = 89/116 (76.72%), Query Frame = 1 

Query: 48  MSKRSRSSEPKVELRVNLNRLPSPATSSLS-----GSGS-SSDISVENSCLGWEG----G 107
           MSKRSRSSE +VELRVNLNR P+ ++SS S     GSGS SS+ISV NSCL  EG    G
Sbjct: 1   MSKRSRSSEAEVELRVNLNRSPTASSSSSSVSTFDGSGSGSSEISVGNSCLSCEGEEHGG 60

Query: 108 VEEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCHNNVFLDFFKQQQQQQQQQHHA 154
             EEIITRSMMLVGCPGCFMYVMLTEKSSQCPKC NNVFLDFFK      QQ HHA
Sbjct: 61  RLEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFLDFFK------QQPHHA 110

[Close]
BLAST of CmaCh20G001550 vs. NCBI nr
Match: gi|567200461|ref|XP_006407430.1| (hypothetical protein EUTSA_v10021790mg [Eutrema salsugineum])

HSP 1 Score: 76.6 bits (187), Expect = 4.1e-11
Identity = 45/96 (46.88%), Postives = 63/96 (65.62%), Query Frame = 1 

Query: 48  MSKRSRSSEPKVELRVNLNRLPSPATS-SLSGSGSSSDISVENSCLGWEGGVEEEIITRS 107
           MS+R+ S+ PK+EL++NL+  PS A+  SL  S + S+ +  +SC+  E   EE   T S
Sbjct: 1   MSRRN-SNWPKLELKLNLSPPPSQASQMSLVRSPTRSNTTSPSSCVSSESNQEEMETTTS 60

Query: 108 MMLVGCPGCFMYVMLTEKSSQCPKCHNNVFLDFFKQ 143
           M+LVGCP C MYVML++   +CPKC + V LDF  Q
Sbjct: 61  MVLVGCPRCLMYVMLSQDDPKCPKCKSTVLLDFLHQ 95

[Close]
BLAST of CmaCh20G001550 vs. NCBI nr
Match: gi|674924808|emb|CDY08510.1| (BnaA05g27460D [Brassica napus])

HSP 1 Score: 76.6 bits (187), Expect = 4.1e-11
Identity = 45/96 (46.88%), Postives = 61/96 (63.54%), Query Frame = 1 

Query: 48  MSKRSRSSEPKVELRVNLNRLPSPATS-SLSGSGSSSDISVENSCLGWEGGVEEEIITRS 107
           MS+R+RS  PK+EL++NL+  PS     S+  S S S+ +  NSC+  E   EE     S
Sbjct: 1   MSRRNRSG-PKLELKLNLSPPPSQGEQMSMVRSPSRSNTASPNSCVSSEPSQEEMETPIS 60

Query: 108 MMLVGCPGCFMYVMLTEKSSQCPKCHNNVFLDFFKQ 143
           M+LVGCP C MYVML++   +CPKC + V LDFF +
Sbjct: 61  MVLVGCPRCLMYVMLSQDEPKCPKCKSTVLLDFFHE 95

[Close]
BLAST of CmaCh20G001550 vs. NCBI nr
Match: gi|727583833|ref|XP_010464878.1| (PREDICTED: uncharacterized protein LOC104745369 [Camelina sativa])

HSP 1 Score: 76.3 bits (186), Expect = 5.3e-11
Identity = 46/99 (46.46%), Postives = 65/99 (65.66%), Query Frame = 1 

Query: 48  MSKRSRSSEPKVELRVNLNRLPSPATS-SLSGSGSSSDISVENSCLGWEGGVEEEI--IT 107
           MS+R+++  PK+ELR+NL+  PS A+  SL  S + S+ +  +SC+  E   E+EI   T
Sbjct: 1   MSRRNKNG-PKIELRLNLSPPPSQASQMSLVRSPTRSNSTSPSSCVSSETNQEDEIDTTT 60

Query: 108 RSMMLVGCPGCFMYVMLTEKSSQCPKCHNNVFLDFFKQQ 144
            SM+LVGCP C MYVML++   +CPKC + V LDF   Q
Sbjct: 61  TSMVLVGCPRCLMYVMLSDDDPKCPKCKSTVLLDFLHHQ 98

[Close]
BLAST of CmaCh20G001550 vs. NCBI nr
Match: gi|565478210|ref|XP_006296745.1| (hypothetical protein CARUB_v10014943mg [Capsella rubella])

HSP 1 Score: 76.3 bits (186), Expect = 5.3e-11
Identity = 46/98 (46.94%), Postives = 65/98 (66.33%), Query Frame = 1 

Query: 48  MSKRSRSSEPKVELRVNLNRLPSPATS-SLSGSGSSSDISVENSCLGWEGGVEEEI--IT 107
           MS+R+++  PK+ELR+N++  PS A+  SL  S + S+ +  +SC+  E   E+EI   T
Sbjct: 1   MSRRNKNG-PKLELRLNISPPPSQASQMSLVLSPTRSNTTSPSSCVSSETNQEDEIDTTT 60

Query: 108 RSMMLVGCPGCFMYVMLTEKSSQCPKCHNNVFLDFFKQ 143
            SM+LVGCP C MYVML+E   +CPKC + V LDF  Q
Sbjct: 61  TSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHQ 97

The following BLAST results are available for this feature:
BLAST of CmaCh20G001550 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmaCh20G001550 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KJX5_CUCSA8.0e-3072.41Uncharacterized protein OS=Cucumis sativus GN=Csa_6G425780 PE=4 SV=1[more]
M4F180_BRARP2.2e-1146.88Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1[more]
V4M909_EUTSA2.9e-1146.88Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10021790mg PE=4 SV=1[more]
A0A078F242_BRANA2.9e-1146.88BnaA05g27460D protein OS=Brassica napus GN=BnaA05g27460D PE=4 SV=1[more]
R0HZX7_9BRAS3.7e-1146.94Uncharacterized protein OS=Capsella rubella GN=CARUB_v10014943mg PE=4 SV=1[more]
BLAST of CmaCh20G001550 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G11600.13.2e-1444.79 unknown protein[more]
AT5G06270.11.5e-1142.20 unknown protein[more]
AT5G22270.13.8e-0742.50 unknown protein[more]
BLAST of CmaCh20G001550 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700192837|gb|KGN48041.1|1.1e-2972.41hypothetical protein Csa_6G425780 [Cucumis sativus][more]
gi|567200461|ref|XP_006407430.1|4.1e-1146.88hypothetical protein EUTSA_v10021790mg [Eutrema salsugineum][more]
gi|674924808|emb|CDY08510.1|4.1e-1146.88BnaA05g27460D [Brassica napus][more]
gi|727583833|ref|XP_010464878.1|5.3e-1146.46PREDICTED: uncharacterized protein LOC104745369 [Camelina sativa][more]
gi|565478210|ref|XP_006296745.1|5.3e-1146.94hypothetical protein CARUB_v10014943mg [Capsella rubella][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh20G001550.1CmaCh20G001550.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33177FAMILY NOT NAMEDcoord: 45..140
score: 3.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh20G001550Cucsa.185820Cucumber (Gy14) v1cgycmaB0530
CmaCh20G001550Cla008627Watermelon (97103) v1cmawmB531
CmaCh20G001550Csa6G425780Cucumber (Chinese Long) v2cmacuB562
CmaCh20G001550MELO3C014511Melon (DHL92) v3.5.1cmameB521
CmaCh20G001550ClCG02G022350Watermelon (Charleston Gray)cmawcgB489
CmaCh20G001550CSPI06G23340Wild cucumber (PI 183967)cmacpiB569
CmaCh20G001550CmoCh20G001710Cucurbita moschata (Rifu)cmacmoB550
CmaCh20G001550CmoCh02G013520Cucurbita moschata (Rifu)cmacmoB555
CmaCh20G001550Lsi10G011440Bottle gourd (USVL1VR-Ls)cmalsiB500
CmaCh20G001550Cp4.1LG05g04430Cucurbita pepo (Zucchini)cmacpeB586
CmaCh20G001550Cp4.1LG16g08000Cucurbita pepo (Zucchini)cmacpeB564
CmaCh20G001550MELO3C014511.2Melon (DHL92) v3.6.1cmamedB598
CmaCh20G001550CsaV3_3G037690Cucumber (Chinese Long) v3cmacucB0658
CmaCh20G001550CsaV3_6G038480Cucumber (Chinese Long) v3cmacucB0676
CmaCh20G001550Cla97C02G048440Watermelon (97103) v2cmawmbB577
CmaCh20G001550Bhi10G000135Wax gourdcmawgoB0693
CmaCh20G001550CsGy6G022580Cucumber (Gy14) v2cgybcmaB799
CmaCh20G001550Carg02649Silver-seed gourdcarcmaB1267
CmaCh20G001550Carg18417Silver-seed gourdcarcmaB0575
CmaCh20G001550Carg03648Silver-seed gourdcarcmaB0345
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh20G001550CmaCh02G013120Cucurbita maxima (Rimu)cmacmaB470
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh20G001550Cucurbita maxima (Rimu)cmacmaB262
CmaCh20G001550Cucurbita maxima (Rimu)cmacmaB491
CmaCh20G001550Cucumber (Gy14) v1cgycmaB0678
CmaCh20G001550Cucurbita moschata (Rifu)cmacmoB570
CmaCh20G001550Wild cucumber (PI 183967)cmacpiB553
CmaCh20G001550Cucumber (Chinese Long) v2cmacuB548
CmaCh20G001550Melon (DHL92) v3.5.1cmameB519
CmaCh20G001550Watermelon (Charleston Gray)cmawcgB475
CmaCh20G001550Watermelon (97103) v1cmawmB511
CmaCh20G001550Cucurbita pepo (Zucchini)cmacpeB572
CmaCh20G001550Cucurbita pepo (Zucchini)cmacpeB580
CmaCh20G001550Cucurbita pepo (Zucchini)cmacpeB592
CmaCh20G001550Cucumber (Gy14) v2cgybcmaB119