MELO3C025587 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C025587
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Photosystem I subunit O
Location	chr12 : 14050193 .. 14051483 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAACGCCCAACAAAATCCCAATCCCTTTCCCCCTCCCTTCTACAAACCAACTGCACCTCCCGACCCCTAAATCCGCACTAATCCCGATCCCCACAAAATGGCCACCGCCTTCGCTACCTCCTCTGTCGCCGGCCTCGGAACCGCCTCCCTCTCCTCTCCTTCCTCCAGATCTCCCCGTCTAGTCTCCGGTAATCCACTGCTACCTCCAATCAATCCATCTCCAACTCTCTCTGCTACTGCTGTTATTTATTTTTTGGTCTTTATTGTCGTCTTCGCAGGGTTCATCAAGTCGCCCGTGGCCGCCAGGAATCCGCTTAACGTAGGGCGTGCATCCCGTGGAAGGTTCACCTGGTAAGAGATTTAGCGATGCTCTGATTTGGAGAATGAGTGGTTGTTTGTTGTGTATTTTGATATTGATTTTGTTTTGGGGGAATGAAGCTTTGAGAGGGATTGGCTACGGAGAGATCTGAATGTTATTGGATTTGGACTGATCGGGTGGATTGCCCCATCGAGCATTCCGGTGATCAATGGGAAGAGCTTGACGGGGCTGTTCTTTGAGAGCATTGGAACAGAGCTTGCCCATTTTCCTTCTCCACCCGCCCTCACTTCTCAATTCTGGTAAATTACAATTTCCACCTAACTTATTATTATTATTATTATTCTTAA

mRNA sequence

AAAACGCCCAACAAAATCCCAATCCCTTTCCCCCTCCCTTCTACAAACCAACTGCACCTCCCGACCCCTAAATCCGCACTAATCCCGATCCCCACAAAATGGCCACCGCCTTCGCTACCTCCTCTGTCGCCGGCCTCGGAACCGCCTCCCTCTCCTCTCCTTCCTCCAGATCTCCCCGTCTAGTCTCCGGGTTCATCAAGTCGCCCGTGGCCGCCAGGAATCCGCTTAACGTAGGGCGTGCATCCCGTGGAAGGTTCACCTGCTTTGAGAGGGATTGGCTACGGAGAGATCTGAATGTTATTGGATTTGGACTGATCGGGTGGATTGCCCCATCGAGCATTCCGGTGATCAATGGGAAGAGCTTGACGGGGCTGTTCTTTGAGAGCATTGGAACAGAGCTTGCCCATTTTCCTTCTCCACCCGCCCTCACTTCTCAATTCTGGTAAATTACAATTTCCACCTAACTTATTATTATTATTATTATTCTTAA

Coding sequence (CDS)

ATGGCCACCGCCTTCGCTACCTCCTCTGTCGCCGGCCTCGGAACCGCCTCCCTCTCCTCTCCTTCCTCCAGATCTCCCCGTCTAGTCTCCGGGTTCATCAAGTCGCCCGTGGCCGCCAGGAATCCGCTTAACGTAGGGCGTGCATCCCGTGGAAGGTTCACCTGCTTTGAGAGGGATTGGCTACGGAGAGATCTGAATGTTATTGGATTTGGACTGATCGGGTGGATTGCCCCATCGAGCATTCCGGTGATCAATGGGAAGAGCTTGACGGGGCTGTTCTTTGAGAGCATTGGAACAGAGCTTGCCCATTTTCCTTCTCCACCCGCCCTCACTTCTCAATTCTGGTAA

Protein sequence

MATAFATSSVAGLGTASLSSPSSRSPRLVSGFIKSPVAARNPLNVGRASRGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGTELAHFPSPPALTSQFW*

Homology

[Close]

BLAST of MELO3C025587 vs. Swiss-Prot
Match: PSAO_ARATH (Photosystem I subunit O OS=Arabidopsis thaliana GN=PSAO PE=1 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 1.9e-52
Identity = 92/115 (80.00%), Postives = 103/115 (89.57%), Query Frame = 1


Query: 60  AGFIKSPVAARNPLNVGRASRGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSL 119
           + F+K  ++A+NPL +  AS GR TCFER+WLRRDLNV+GFGLIGW+APSSIP INGKSL
Sbjct: 26  SSFLKPTLSAKNPLRLAGASGGRVTCFERNWLRRDLNVVGFGLIGWLAPSSIPAINGKSL 85

Query: 120 TGLFFESIGTELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYF 175
           TGLFF+SIGTELAHFP+PPALTSQFWLWL+TWHLGLF+ LTFGQIGFKGRTEDYF
Sbjct: 86  TGLFFDSIGTELAHFPTPPALTSQFWLWLVTWHLGLFLCLTFGQIGFKGRTEDYF 140

[Close]

BLAST of MELO3C025587 vs. TrEMBL
Match: A0A0A0LT61_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G168350 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 2.2e-68
Identity = 138/176 (78.41%), Postives = 141/176 (80.11%), Query Frame = 1


Query: 1   MATAFATSSVAGLGTASLSSPSSRSPRLVSGNPLLPPINPSPTLSATAVIYFLVFIVVFA 60
           MATAFATSSVAGLGTASLSSPSSRSPRLVS                              
Sbjct: 1   MATAFATSSVAGLGTASLSSPSSRSPRLVS------------------------------ 60

Query: 61  GFIKSPVAARNPLNVGRASRGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLT 120
           GFIK PVAARNPL+V  AS G+FTCFERDWLRRDLNVIGFGLIGWIAPSSIPVI+GKSLT
Sbjct: 61  GFIKPPVAARNPLSVAGASGGKFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVISGKSLT 120

Query: 121 GLFFESIGTELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK 177
           GLFFESIG ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
Sbjct: 121 GLFFESIGAELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK 146

[Close]

BLAST of MELO3C025587 vs. TrEMBL
Match: A0A166C9D6_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_012226 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 2.3e-57
Identity = 117/171 (68.42%), Postives = 132/171 (77.19%), Query Frame = 1


Query: 4   AFATSSVAGLGTASLSSPSSRSPRLVSGNPLLPPINPSPTLSATAVIYFLVFIVVFAGFI 63
           A  TS++ GLGT+SLSSPS     LVS            T+S T            +GF+
Sbjct: 2   AATTSTIVGLGTSSLSSPS----HLVSAKQ---------TVSLT------------SGFL 61

Query: 64  KSPVAARNPLNVGRASRGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLF 123
           +SPVAARNPL + +AS G+FTCFE++WLRRDLNVIGFGLIGW+APSSIP+ING SLTGLF
Sbjct: 62  RSPVAARNPLRLAQASGGKFTCFEQNWLRRDLNVIGFGLIGWLAPSSIPIINGDSLTGLF 121

Query: 124 FESIGTELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYF 175
           F SIGTELAHFPSPPALTSQFWLWL+TWHLGLFI LTFGQIGFKGRTEDYF
Sbjct: 122 FSSIGTELAHFPSPPALTSQFWLWLVTWHLGLFICLTFGQIGFKGRTEDYF 147

[Close]

BLAST of MELO3C025587 vs. TrEMBL
Match: A0A068UGV8_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00023914001 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.3e-55
Identity = 116/178 (65.17%), Postives = 130/178 (73.03%), Query Frame = 1


Query: 1   MATAFATSS-VAGLGTASLSSPS-SRSPRLVSGNPLLPPINPSPTLSATAVIYFLVFIVV 60
           MAT FAT+S V GLGT+SLSSPS + SP+ V  N                          
Sbjct: 1   MATTFATASTVVGLGTSSLSSPSRASSPKKVCLN-------------------------- 60

Query: 61  FAGFIKSPVAARNPLNVGRASRGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKS 120
            +GF+KSPV  RNPL++ + S G+FTCFERDWLR D NVIGFGLIGWIAPSSIPVINGKS
Sbjct: 61  -SGFLKSPVTTRNPLSLAQISGGKFTCFERDWLRTDFNVIGFGLIGWIAPSSIPVINGKS 120

Query: 121 LTGLFFESIGTELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK 177
           LTGLFFESIGTELAHFP+ P LTS FWLW++TWHLGLF+ LTFGQIGFKGRTE YF K
Sbjct: 121 LTGLFFESIGTELAHFPTGPPLTSPFWLWMVTWHLGLFLILTFGQIGFKGRTEGYFDK 151

[Close]

BLAST of MELO3C025587 vs. TrEMBL
Match: A0A067JJG3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26726 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 1.1e-54
Identity = 114/175 (65.14%), Postives = 126/175 (72.00%), Query Frame = 1


Query: 1   MATAFATSS-VAGLGTASLSSPSSRSPRLVSGNPLLPPINPSPTLSATAVIYFLVFIVVF 60
           MA AFATSS V GLG++SLSSP S S R                              + 
Sbjct: 1   MAAAFATSSTVIGLGSSSLSSPRSCSCRRTC---------------------------LS 60

Query: 61  AGFIKSPVAARNPLNVGRASRGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSL 120
           +GF+KS   ARNPL    ++ G+F CFERDWLRRDLNVIGFGLIGW+APSSIP INGKSL
Sbjct: 61  SGFVKSVATARNPLRQAGSNGGKFMCFERDWLRRDLNVIGFGLIGWLAPSSIPAINGKSL 120

Query: 121 TGLFFESIGTELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYF 175
           TGLFFESIG ELAHFP+PPALTSQFWLWL+TWHLGLF+ LTFGQIGFKGRTEDYF
Sbjct: 121 TGLFFESIGAELAHFPTPPALTSQFWLWLVTWHLGLFLCLTFGQIGFKGRTEDYF 148

[Close]

BLAST of MELO3C025587 vs. TrEMBL
Match: A0A067D630_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032153mg PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 1.8e-54
Identity = 113/176 (64.20%), Postives = 125/176 (71.02%), Query Frame = 1


Query: 2   ATAFATSS-VAGLGTASLSSPSSRSPRLVSGNPLLPPINPSPTLSATAVIYFLVFIVVFA 61
           A AFA+SS V GLG++SLSSP   +                                + +
Sbjct: 3   AAAFASSSPVVGLGSSSLSSPKRTA--------------------------------LGS 62

Query: 62  GFIKSPVAARNPLNVGRASRGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLT 121
            F+KSPVAARNPL V  A  G+ TCFERDWLR DLNVIGFGLIGW+APSSIP INGKSLT
Sbjct: 63  SFVKSPVAARNPLRVAGACGGKVTCFERDWLRTDLNVIGFGLIGWLAPSSIPAINGKSLT 122

Query: 122 GLFFESIGTELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK 177
           GLFFESIGTELAHFP+PP LTSQFWLWL+TWH GLF+ LTFGQIGFKGRTEDYFSK
Sbjct: 123 GLFFESIGTELAHFPTPPPLTSQFWLWLVTWHFGLFLCLTFGQIGFKGRTEDYFSK 146

[Close]

BLAST of MELO3C025587 vs. TAIR10
Match: AT1G08380.1 (AT1G08380.1 photosystem I subunit O)

HSP 1 Score: 206.8 bits (525), Expect = 1.1e-53
Identity = 92/115 (80.00%), Postives = 103/115 (89.57%), Query Frame = 1


Query: 60  AGFIKSPVAARNPLNVGRASRGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSL 119
           + F+K  ++A+NPL +  AS GR TCFER+WLRRDLNV+GFGLIGW+APSSIP INGKSL
Sbjct: 26  SSFLKPTLSAKNPLRLAGASGGRVTCFERNWLRRDLNVVGFGLIGWLAPSSIPAINGKSL 85

Query: 120 TGLFFESIGTELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYF 175
           TGLFF+SIGTELAHFP+PPALTSQFWLWL+TWHLGLF+ LTFGQIGFKGRTEDYF
Sbjct: 86  TGLFFDSIGTELAHFPTPPALTSQFWLWLVTWHLGLFLCLTFGQIGFKGRTEDYF 140

[Close]

BLAST of MELO3C025587 vs. NCBI nr
Match: gi|659127336|ref|XP_008463649.1| (PREDICTED: uncharacterized protein LOC103501744 [Cucumis melo])

HSP 1 Score: 283.1 bits (723), Expect = 3.3e-73
Identity = 146/176 (82.95%), Postives = 146/176 (82.95%), Query Frame = 1


Query: 1   MATAFATSSVAGLGTASLSSPSSRSPRLVSGNPLLPPINPSPTLSATAVIYFLVFIVVFA 60
           MATAFATSSVAGLGTASLSSPSSRSPRLVS                              
Sbjct: 1   MATAFATSSVAGLGTASLSSPSSRSPRLVS------------------------------ 60

Query: 61  GFIKSPVAARNPLNVGRASRGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLT 120
           GFIKSPVAARNPLNVGRASRGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLT
Sbjct: 61  GFIKSPVAARNPLNVGRASRGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLT 120

Query: 121 GLFFESIGTELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK 177
           GLFFESIGTELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
Sbjct: 121 GLFFESIGTELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK 146

[Close]

BLAST of MELO3C025587 vs. NCBI nr
Match: gi|449443468|ref|XP_004139499.1| (PREDICTED: photosystem I subunit O [Cucumis sativus])

HSP 1 Score: 266.5 bits (680), Expect = 3.2e-68
Identity = 138/176 (78.41%), Postives = 141/176 (80.11%), Query Frame = 1


Query: 1   MATAFATSSVAGLGTASLSSPSSRSPRLVSGNPLLPPINPSPTLSATAVIYFLVFIVVFA 60
           MATAFATSSVAGLGTASLSSPSSRSPRLVS                              
Sbjct: 1   MATAFATSSVAGLGTASLSSPSSRSPRLVS------------------------------ 60

Query: 61  GFIKSPVAARNPLNVGRASRGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLT 120
           GFIK PVAARNPL+V  AS G+FTCFERDWLRRDLNVIGFGLIGWIAPSSIPVI+GKSLT
Sbjct: 61  GFIKPPVAARNPLSVAGASGGKFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVISGKSLT 120

Query: 121 GLFFESIGTELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK 177
           GLFFESIG ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
Sbjct: 121 GLFFESIGAELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK 146

[Close]

BLAST of MELO3C025587 vs. NCBI nr
Match: gi|1021045689|gb|KZN03470.1| (hypothetical protein DCAR_012226 [Daucus carota subsp. sativus])

HSP 1 Score: 229.9 bits (585), Expect = 3.3e-57
Identity = 117/171 (68.42%), Postives = 132/171 (77.19%), Query Frame = 1


Query: 4   AFATSSVAGLGTASLSSPSSRSPRLVSGNPLLPPINPSPTLSATAVIYFLVFIVVFAGFI 63
           A  TS++ GLGT+SLSSPS     LVS            T+S T            +GF+
Sbjct: 2   AATTSTIVGLGTSSLSSPS----HLVSAKQ---------TVSLT------------SGFL 61

Query: 64  KSPVAARNPLNVGRASRGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLF 123
           +SPVAARNPL + +AS G+FTCFE++WLRRDLNVIGFGLIGW+APSSIP+ING SLTGLF
Sbjct: 62  RSPVAARNPLRLAQASGGKFTCFEQNWLRRDLNVIGFGLIGWLAPSSIPIINGDSLTGLF 121

Query: 124 FESIGTELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYF 175
           F SIGTELAHFPSPPALTSQFWLWL+TWHLGLFI LTFGQIGFKGRTEDYF
Sbjct: 122 FSSIGTELAHFPSPPALTSQFWLWLVTWHLGLFICLTFGQIGFKGRTEDYF 147

[Close]

BLAST of MELO3C025587 vs. NCBI nr
Match: gi|661889291|emb|CDP06878.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 224.2 bits (570), Expect = 1.8e-55
Identity = 116/178 (65.17%), Postives = 130/178 (73.03%), Query Frame = 1


Query: 1   MATAFATSS-VAGLGTASLSSPS-SRSPRLVSGNPLLPPINPSPTLSATAVIYFLVFIVV 60
           MAT FAT+S V GLGT+SLSSPS + SP+ V  N                          
Sbjct: 1   MATTFATASTVVGLGTSSLSSPSRASSPKKVCLN-------------------------- 60

Query: 61  FAGFIKSPVAARNPLNVGRASRGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKS 120
            +GF+KSPV  RNPL++ + S G+FTCFERDWLR D NVIGFGLIGWIAPSSIPVINGKS
Sbjct: 61  -SGFLKSPVTTRNPLSLAQISGGKFTCFERDWLRTDFNVIGFGLIGWIAPSSIPVINGKS 120

Query: 121 LTGLFFESIGTELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK 177
           LTGLFFESIGTELAHFP+ P LTS FWLW++TWHLGLF+ LTFGQIGFKGRTE YF K
Sbjct: 121 LTGLFFESIGTELAHFPTGPPLTSPFWLWMVTWHLGLFLILTFGQIGFKGRTEGYFDK 151

[Close]

BLAST of MELO3C025587 vs. NCBI nr
Match: gi|802753230|ref|XP_012088445.1| (PREDICTED: photosystem I subunit O [Jatropha curcas])

HSP 1 Score: 221.1 bits (562), Expect = 1.6e-54
Identity = 114/175 (65.14%), Postives = 126/175 (72.00%), Query Frame = 1


Query: 1   MATAFATSS-VAGLGTASLSSPSSRSPRLVSGNPLLPPINPSPTLSATAVIYFLVFIVVF 60
           MA AFATSS V GLG++SLSSP S S R                              + 
Sbjct: 1   MAAAFATSSTVIGLGSSSLSSPRSCSCRRTC---------------------------LS 60

Query: 61  AGFIKSPVAARNPLNVGRASRGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSL 120
           +GF+KS   ARNPL    ++ G+F CFERDWLRRDLNVIGFGLIGW+APSSIP INGKSL
Sbjct: 61  SGFVKSVATARNPLRQAGSNGGKFMCFERDWLRRDLNVIGFGLIGWLAPSSIPAINGKSL 120

Query: 121 TGLFFESIGTELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYF 175
           TGLFFESIG ELAHFP+PPALTSQFWLWL+TWHLGLF+ LTFGQIGFKGRTEDYF
Sbjct: 121 TGLFFESIGAELAHFPTPPALTSQFWLWLVTWHLGLFLCLTFGQIGFKGRTEDYF 148

The following BLAST results are available for this feature:

BLAST of MELO3C025587 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PSAO_ARATH	1.9e-52	80.00	Photosystem I subunit O OS=Arabidopsis thaliana GN=PSAO PE=1 SV=1	[more]

BLAST of MELO3C025587 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LT61_CUCSA	2.2e-68	78.41	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G168350 PE=4 SV=1	[more]
A0A166C9D6_DAUCA	2.3e-57	68.42	Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_012226 PE=4 SV=1	[more]
A0A068UGV8_COFCA	1.3e-55	65.17	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00023914001 PE=4 SV=1	[more]
A0A067JJG3_JATCU	1.1e-54	65.14	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26726 PE=4 SV=1	[more]
A0A067D630_CITSI	1.8e-54	64.20	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032153mg PE=4 SV=1	[more]

BLAST of MELO3C025587 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G08380.1	1.1e-53	80.00	photosystem I subunit O	[more]

BLAST of MELO3C025587 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659127336\|ref\|XP_008463649.1\|	3.3e-73	82.95	PREDICTED: uncharacterized protein LOC103501744 [Cucumis melo]	[more]
gi\|449443468\|ref\|XP_004139499.1\|	3.2e-68	78.41	PREDICTED: photosystem I subunit O [Cucumis sativus]	[more]
gi\|1021045689\|gb\|KZN03470.1\|	3.3e-57	68.42	hypothetical protein DCAR_012226 [Daucus carota subsp. sativus]	[more]
gi\|661889291\|emb\|CDP06878.1\|	1.8e-55	65.17	unnamed protein product [Coffea canephora]	[more]
gi\|802753230\|ref\|XP_012088445.1\|	1.6e-54	65.14	PREDICTED: photosystem I subunit O [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR017498	PSI_PsaO
IPR017498	PSI_PsaO

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030003	cellular cation homeostasis
biological_process	GO:0006364	rRNA processing
biological_process	GO:0044763	single-organism cellular process
biological_process	GO:0044238	primary metabolic process
biological_process	GO:0019684	photosynthesis, light reaction
biological_process	GO:0071704	organic substance metabolic process
biological_process	GO:0019344	cysteine biosynthetic process
biological_process	GO:0008150	biological_process
biological_process	GO:0035304	regulation of protein dephosphorylation
biological_process	GO:0009657	plastid organization
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0009767	photosynthetic electron transport chain
biological_process	GO:0009768	photosynthesis, light harvesting in photosystem I
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0070838	divalent metal ion transport
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU44264	melon EST collection version 4.0	transcribed_cluster
MU45777	melon EST collection version 4.0	transcribed_cluster
MU47277	melon EST collection version 4.0	transcribed_cluster
MU61199	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C025587T4	MELO3C025587T4	mRNA
MELO3C025587T3	MELO3C025587T3	mRNA
MELO3C025587T2	MELO3C025587T2	mRNA
MELO3C025587T1	MELO3C025587T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU45777	MU45777	transcribed_cluster
MU44264	MU44264	transcribed_cluster
MU47277	MU47277	transcribed_cluster
MU61199	MU61199	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36311	FAMILY NOT NAMED	coord: 2..115 score: 1.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C025587	Csa1G168350	Cucumber (Chinese Long) v2	cumeB015
MELO3C025587	ClCG01G011760	Watermelon (Charleston Gray)	mewcgB133
MELO3C025587	Cla97C01G011340	Watermelon (97103) v2	mewmbB136
MELO3C025587	CSPI01G14990	Wild cucumber (PI 183967)	cpimeB030
MELO3C025587	Cucsa.319700	Cucumber (Gy14) v1	cgymeB526
MELO3C025587	CmaCh18G006410	Cucurbita maxima (Rimu)	cmameB367
MELO3C025587	CmaCh13G003520	Cucurbita maxima (Rimu)	cmameB195
MELO3C025587	CmoCh13G003810	Cucurbita moschata (Rifu)	cmomeB182
MELO3C025587	Cp4.1LG00g01700	Cucurbita pepo (Zucchini)	cpemeB004
MELO3C025587	CsGy1G014780	Cucumber (Gy14) v2	cgybmeB028
MELO3C025587	CsaV3_1G015100	Cucumber (Chinese Long) v3	cucmeB030

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C025587	Cucurbita maxima (Rimu)	cmameB369