CmoCh13G003810 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh13G003810
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	photosystem I subunit O
Location	Cmo_Chr13 : 4849518 .. 4851053 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATCCGACGTGTCAAAGCGTGATTCATCAAAAATACATCCAAATATCCACAGCAATCGAATCAACAGCGCTTCCCCAAATCTCCTCCCCAACAAAACCCCTCCCTCACTTCCACTACATACCAATCCCAAACCCTAATCCGCACAATCCCTCCCAAAAATGGCGTCCGCCTTCGCTACCTCCTCCTCCGTCGTCGGCCTCGGAAGCTCCTCCCTCTCCTCTCCTTCCTCCAGATCTCCCCGTCTCGTCTCCGGTAACCGGCTTCCACTTGCAACTATTTTCCCCTTCCTCTCCTCTTTAATTGAGTTTGGCGTTTTTTCTCGTCTTCGCAGAGTTCGTCAAGCCTCCCGTGGTCGCGAGGAATCCGTTCGGCGTGCCGCGTTCATTCGGCGGAAGGATCACCTGGTAAGTAAGATTAGAGTGAGAGATAGTATATGAGTTGATCGGTTTGGGATTCGATTTGGAGAATGACGATTTTGTTGTACGGTTTCGTGGTTTGAAAGCTTTCAGAGAGATTGGCTGAGGAGAGATCTGAATGTGATCGGATTTGGACTCATCGGATGGATTGCACCGTCGAGTATCCCGGTGATCGACGGGAAGAGCTTGACGGGGCTCTTCTTTGAGAGCATTGGAACAGAGCTTGCGCATTTCCCGTCTCCACCGGCCCTCACTTCTCAGTTCTGGTAACATATATAATTTACCGCCAATTTCTTTTTCGCACAATTTTAAAATTAATAGTTTAAAATATTATTTTAAATAATTTAAAACTAAAAATTAGGGTATTTGTCCAAACCAATTTTAGACTAACTTAATTGTTTTATTTCAACTAAAATAATTTTTTATTAAATAATAACTCAATTTATCATAATTCTTTTTAGGTTTTGTTTGAGTTTTGGTTATTTATTAAAAATAGCTCTATTGATAATAAATAAGCAAAAATTATAAAATTAAATTATATATATAATTATTTAGATCAATTTTATTTTATTTTATTTTTAAAATTAACAATAATTTTGAGTTTATTCACTTAAATTTAATCTAGTTTAAAGAGAATTCCTGAATCAAATCTAACCTAAATAATTTTATGAGTCAACGTAAATAGTATAGATTAAATTAGATTGTTCGAGTTTTTCGAGTATTTTTAACTTGAAATGATTATTAATAAAAATGATATATATTTAGAACAAAAATATTGTGAAACTCAGGCTGTGGCTGATTACGTGGCACTTGGGTCTGTTCATTACGCTGACATTTGGACAAATAGGGTTCAAGGGGAGGACCGAAGACTATTTTCAAAAGTGAAAAATGTAATAATTGTTATTATAGGAAATGTAATTTCAGTTTTTATTCTTCATGTTTATTACTTTATTAAGTTATCAACTAGTGTTTAGTGTTTGAATAATTATCATTTTCTTCGCCTTTTATCATTCCAACCTCGAAATTGGATCATATTGACTCGGCTATACTAAAGTTTATTAAGTTTTAAATGTCAAACTTTTGAATCGTTATCTTTTCAAAATTTAAAAATGTGACGGC

mRNA sequence

AAATCCGACGTGTCAAAGCGTGATTCATCAAAAATACATCCAAATATCCACAGCAATCGAATCAACAGCGCTTCCCCAAATCTCCTCCCCAACAAAACCCCTCCCTCACTTCCACTACATACCAATCCCAAACCCTAATCCGCACAATCCCTCCCAAAAATGGCGTCCGCCTTCGCTACCTCCTCCTCCGTCGTCGGCCTCGGAAGCTCCTCCCTCTCCTCTCCTTCCTCCAGATCTCCCCGTCTCGTCTCCGAGTTCGTCAAGCCTCCCGTGGTCGCGAGGAATCCGTTCGGCGTGCCGCGTTCATTCGGCGGAAGGATCACCTGCTTTCAGAGAGATTGGCTGAGGAGAGATCTGAATGTGATCGGATTTGGACTCATCGGATGGATTGCACCGTCGAGTATCCCGGTGATCGACGGGAAGAGCTTGACGGGGCTCTTCTTTGAGAGCATTGGAACAGAGCTTGCGCATTTCCCGTCTCCACCGGCCCTCACTTCTCAGTTCTGGCTGTGGCTGATTACGTGGCACTTGGGTCTGTTCATTACGCTGACATTTGGACAAATAGGGTTCAAGGGGAGGACCGAAGACTATTTTCAAAAGTGAAAAATGTAATAATTGTTATTATAGGAAATGTAATTTCAGTTTTTATTCTTCATGTTTATTACTTTATTAAGTTATCAACTAGTGTTTAGTGTTTGAATAATTATCATTTTCTTCGCCTTTTATCATTCCAACCTCGAAATTGGATCATATTGACTCGGCTATACTAAAGTTTATTAAGTTTTAAATGTCAAACTTTTGAATCGTTATCTTTTCAAAATTTAAAAATGTGACGGC

Coding sequence (CDS)

ATGGCGTCCGCCTTCGCTACCTCCTCCTCCGTCGTCGGCCTCGGAAGCTCCTCCCTCTCCTCTCCTTCCTCCAGATCTCCCCGTCTCGTCTCCGAGTTCGTCAAGCCTCCCGTGGTCGCGAGGAATCCGTTCGGCGTGCCGCGTTCATTCGGCGGAAGGATCACCTGCTTTCAGAGAGATTGGCTGAGGAGAGATCTGAATGTGATCGGATTTGGACTCATCGGATGGATTGCACCGTCGAGTATCCCGGTGATCGACGGGAAGAGCTTGACGGGGCTCTTCTTTGAGAGCATTGGAACAGAGCTTGCGCATTTCCCGTCTCCACCGGCCCTCACTTCTCAGTTCTGGCTGTGGCTGATTACGTGGCACTTGGGTCTGTTCATTACGCTGACATTTGGACAAATAGGGTTCAAGGGGAGGACCGAAGACTATTTTCAAAAGTGA

Homology

[Close]

BLAST of CmoCh13G003810 vs. Swiss-Prot
Match: PSAO_ARATH (Photosystem I subunit O OS=Arabidopsis thaliana GN=PSAO PE=1 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 1.4e-56
Identity = 102/145 (70.34%), Postives = 123/145 (84.83%), Query Frame = 1


Query: 1   MASAFATSSSVVGLGSSSLSSPSSRSPRLVSEFVKPPVVARNPFGVPRSFGGRITCFQRD 60
           MA+ FAT S+V+GLG SS+++         S F+KP + A+NP  +  + GGR+TCF+R+
Sbjct: 1   MAATFATPSTVIGLGGSSITTKP-----FSSSFLKPTLSAKNPLRLAGASGGRVTCFERN 60

Query: 61  WLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGTELAHFPSPPALTSQFWLWLI 120
           WLRRDLNV+GFGLIGW+APSSIP I+GKSLTGLFF+SIGTELAHFP+PPALTSQFWLWL+
Sbjct: 61  WLRRDLNVVGFGLIGWLAPSSIPAINGKSLTGLFFDSIGTELAHFPTPPALTSQFWLWLV 120

Query: 121 TWHLGLFITLTFGQIGFKGRTEDYF 146
           TWHLGLF+ LTFGQIGFKGRTEDYF
Sbjct: 121 TWHLGLFLCLTFGQIGFKGRTEDYF 140

[Close]

BLAST of CmoCh13G003810 vs. TrEMBL
Match: A0A0A0LT61_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G168350 PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 5.1e-66
Identity = 126/147 (85.71%), Postives = 134/147 (91.16%), Query Frame = 1


Query: 1   MASAFATSSSVVGLGSSSLSSPSSRSPRLVSEFVKPPVVARNPFGVPRSFGGRITCFQRD 60
           MA+AFA +SSV GLG++SLSSPSSRSPRLVS F+KPPV ARNP  V  + GG+ TCF+RD
Sbjct: 1   MATAFA-TSSVAGLGTASLSSPSSRSPRLVSGFIKPPVAARNPLSVAGASGGKFTCFERD 60

Query: 61  WLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGTELAHFPSPPALTSQFWLWLI 120
           WLRRDLNVIGFGLIGWIAPSSIPVI GKSLTGLFFESIG ELAHFPSPPALTSQFWLWLI
Sbjct: 61  WLRRDLNVIGFGLIGWIAPSSIPVISGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI 120

Query: 121 TWHLGLFITLTFGQIGFKGRTEDYFQK 148
           TWHLGLFITLTFGQIGFKGRTEDYF K
Sbjct: 121 TWHLGLFITLTFGQIGFKGRTEDYFSK 146

[Close]

BLAST of CmoCh13G003810 vs. TrEMBL
Match: A0A067D630_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032153mg PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 1.8e-58
Identity = 113/146 (77.40%), Postives = 125/146 (85.62%), Query Frame = 1


Query: 2   ASAFATSSSVVGLGSSSLSSPSSRSPRLVSEFVKPPVVARNPFGVPRSFGGRITCFQRDW 61
           A+AFA+SS VVGLGSSSLSSP   +  L S FVK PV ARNP  V  + GG++TCF+RDW
Sbjct: 3   AAAFASSSPVVGLGSSSLSSPKRTA--LGSSFVKSPVAARNPLRVAGACGGKVTCFERDW 62

Query: 62  LRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGTELAHFPSPPALTSQFWLWLIT 121
           LR DLNVIGFGLIGW+APSSIP I+GKSLTGLFFESIGTELAHFP+PP LTSQFWLWL+T
Sbjct: 63  LRTDLNVIGFGLIGWLAPSSIPAINGKSLTGLFFESIGTELAHFPTPPPLTSQFWLWLVT 122

Query: 122 WHLGLFITLTFGQIGFKGRTEDYFQK 148
           WH GLF+ LTFGQIGFKGRTEDYF K
Sbjct: 123 WHFGLFLCLTFGQIGFKGRTEDYFSK 146

[Close]

BLAST of CmoCh13G003810 vs. TrEMBL
Match: V4RS53_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029515mg PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 1.8e-58
Identity = 113/146 (77.40%), Postives = 125/146 (85.62%), Query Frame = 1


Query: 2   ASAFATSSSVVGLGSSSLSSPSSRSPRLVSEFVKPPVVARNPFGVPRSFGGRITCFQRDW 61
           A+AFA+SS VVGLGSSSLSSP   +  L S FVK PV ARNP  V  + GG++TCF+RDW
Sbjct: 3   AAAFASSSPVVGLGSSSLSSPKRTA--LGSSFVKSPVAARNPLRVAGACGGKVTCFERDW 62

Query: 62  LRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGTELAHFPSPPALTSQFWLWLIT 121
           LR DLNVIGFGLIGW+APSSIP I+GKSLTGLFFESIGTELAHFP+PP LTSQFWLWL+T
Sbjct: 63  LRTDLNVIGFGLIGWLAPSSIPAINGKSLTGLFFESIGTELAHFPTPPPLTSQFWLWLVT 122

Query: 122 WHLGLFITLTFGQIGFKGRTEDYFQK 148
           WH GLF+ LTFGQIGFKGRTEDYF K
Sbjct: 123 WHFGLFLCLTFGQIGFKGRTEDYFSK 146

[Close]

BLAST of CmoCh13G003810 vs. TrEMBL
Match: B9MYU1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s20960g PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 3.0e-58
Identity = 115/151 (76.16%), Postives = 127/151 (84.11%), Query Frame = 1


Query: 1   MASAFATSSSVVGLGSSSLSSPSS-RSPR---LVSEFVKPPVVARNPFGVPRSFGGRITC 60
           MA+ FA+ S+VVGLGS SLSSPS   SP+   L S FVK PV ARNP G+  + GG+  C
Sbjct: 1   MAATFASPSAVVGLGSGSLSSPSRISSPKKICLSSGFVKSPVTARNPLGLAGTGGGKFMC 60

Query: 61  FQRDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGTELAHFPSPPALTSQFW 120
           FQ DWLR+DLNVIGFGLIGW+APSS+P I GKSLTGLFFESIGTELAHFP+PP LTSQFW
Sbjct: 61  FQGDWLRKDLNVIGFGLIGWLAPSSVPAIGGKSLTGLFFESIGTELAHFPTPPPLTSQFW 120

Query: 121 LWLITWHLGLFITLTFGQIGFKGRTEDYFQK 148
           LWL+TWHLGLFI LTFGQIGFKGRTEDYFQK
Sbjct: 121 LWLVTWHLGLFICLTFGQIGFKGRTEDYFQK 151

[Close]

BLAST of CmoCh13G003810 vs. TrEMBL
Match: A0A067JJG3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26726 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 1.1e-57
Identity = 115/148 (77.70%), Postives = 125/148 (84.46%), Query Frame = 1


Query: 1   MASAFATSSSVVGLGSSSLSSPSSRSPR---LVSEFVKPPVVARNPFGVPRSFGGRITCF 60
           MA+AFATSS+V+GLGSSSLSSP S S R   L S FVK    ARNP     S GG+  CF
Sbjct: 1   MAAAFATSSTVIGLGSSSLSSPRSCSCRRTCLSSGFVKSVATARNPLRQAGSNGGKFMCF 60

Query: 61  QRDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGTELAHFPSPPALTSQFWL 120
           +RDWLRRDLNVIGFGLIGW+APSSIP I+GKSLTGLFFESIG ELAHFP+PPALTSQFWL
Sbjct: 61  ERDWLRRDLNVIGFGLIGWLAPSSIPAINGKSLTGLFFESIGAELAHFPTPPALTSQFWL 120

Query: 121 WLITWHLGLFITLTFGQIGFKGRTEDYF 146
           WL+TWHLGLF+ LTFGQIGFKGRTEDYF
Sbjct: 121 WLVTWHLGLFLCLTFGQIGFKGRTEDYF 148

[Close]

BLAST of CmoCh13G003810 vs. TAIR10
Match: AT1G08380.1 (AT1G08380.1 photosystem I subunit O)

HSP 1 Score: 220.3 bits (560), Expect = 7.8e-58
Identity = 102/145 (70.34%), Postives = 123/145 (84.83%), Query Frame = 1


Query: 1   MASAFATSSSVVGLGSSSLSSPSSRSPRLVSEFVKPPVVARNPFGVPRSFGGRITCFQRD 60
           MA+ FAT S+V+GLG SS+++         S F+KP + A+NP  +  + GGR+TCF+R+
Sbjct: 1   MAATFATPSTVIGLGGSSITTKP-----FSSSFLKPTLSAKNPLRLAGASGGRVTCFERN 60

Query: 61  WLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGTELAHFPSPPALTSQFWLWLI 120
           WLRRDLNV+GFGLIGW+APSSIP I+GKSLTGLFF+SIGTELAHFP+PPALTSQFWLWL+
Sbjct: 61  WLRRDLNVVGFGLIGWLAPSSIPAINGKSLTGLFFDSIGTELAHFPTPPALTSQFWLWLV 120

Query: 121 TWHLGLFITLTFGQIGFKGRTEDYF 146
           TWHLGLF+ LTFGQIGFKGRTEDYF
Sbjct: 121 TWHLGLFLCLTFGQIGFKGRTEDYF 140

[Close]

BLAST of CmoCh13G003810 vs. NCBI nr
Match: gi|449443468|ref|XP_004139499.1| (PREDICTED: photosystem I subunit O [Cucumis sativus])

HSP 1 Score: 258.5 bits (659), Expect = 7.3e-66
Identity = 126/147 (85.71%), Postives = 134/147 (91.16%), Query Frame = 1


Query: 1   MASAFATSSSVVGLGSSSLSSPSSRSPRLVSEFVKPPVVARNPFGVPRSFGGRITCFQRD 60
           MA+AFA +SSV GLG++SLSSPSSRSPRLVS F+KPPV ARNP  V  + GG+ TCF+RD
Sbjct: 1   MATAFA-TSSVAGLGTASLSSPSSRSPRLVSGFIKPPVAARNPLSVAGASGGKFTCFERD 60

Query: 61  WLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGTELAHFPSPPALTSQFWLWLI 120
           WLRRDLNVIGFGLIGWIAPSSIPVI GKSLTGLFFESIG ELAHFPSPPALTSQFWLWLI
Sbjct: 61  WLRRDLNVIGFGLIGWIAPSSIPVISGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI 120

Query: 121 TWHLGLFITLTFGQIGFKGRTEDYFQK 148
           TWHLGLFITLTFGQIGFKGRTEDYF K
Sbjct: 121 TWHLGLFITLTFGQIGFKGRTEDYFSK 146

[Close]

BLAST of CmoCh13G003810 vs. NCBI nr
Match: gi|659127336|ref|XP_008463649.1| (PREDICTED: uncharacterized protein LOC103501744 [Cucumis melo])

HSP 1 Score: 258.1 bits (658), Expect = 9.5e-66
Identity = 127/147 (86.39%), Postives = 135/147 (91.84%), Query Frame = 1


Query: 1   MASAFATSSSVVGLGSSSLSSPSSRSPRLVSEFVKPPVVARNPFGVPRSFGGRITCFQRD 60
           MA+AFA +SSV GLG++SLSSPSSRSPRLVS F+K PV ARNP  V R+  GR TCF+RD
Sbjct: 1   MATAFA-TSSVAGLGTASLSSPSSRSPRLVSGFIKSPVAARNPLNVGRASRGRFTCFERD 60

Query: 61  WLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGTELAHFPSPPALTSQFWLWLI 120
           WLRRDLNVIGFGLIGWIAPSSIPVI+GKSLTGLFFESIGTELAHFPSPPALTSQFWLWLI
Sbjct: 61  WLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGTELAHFPSPPALTSQFWLWLI 120

Query: 121 TWHLGLFITLTFGQIGFKGRTEDYFQK 148
           TWHLGLFITLTFGQIGFKGRTEDYF K
Sbjct: 121 TWHLGLFITLTFGQIGFKGRTEDYFSK 146

[Close]

BLAST of CmoCh13G003810 vs. NCBI nr
Match: gi|743796878|ref|XP_011006585.1| (PREDICTED: photosystem I subunit O-like [Populus euphratica])

HSP 1 Score: 233.4 bits (594), Expect = 2.5e-58
Identity = 116/151 (76.82%), Postives = 127/151 (84.11%), Query Frame = 1


Query: 1   MASAFATSSSVVGLGSSSLSSPSS-RSPRLV---SEFVKPPVVARNPFGVPRSFGGRITC 60
           MA+ FA+ S+VVGLGS SLSSPS   SP+ +   S FVK PV ARNP G+  + GG+  C
Sbjct: 1   MAATFASPSAVVGLGSGSLSSPSRISSPKKICLGSGFVKSPVTARNPLGLAGTGGGKFMC 60

Query: 61  FQRDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGTELAHFPSPPALTSQFW 120
           FQ DWLR+DLNVIGFGLIGWIAPSSIP I GKSLTGLFFESIGTELAHFP+PP LTSQFW
Sbjct: 61  FQGDWLRKDLNVIGFGLIGWIAPSSIPAIGGKSLTGLFFESIGTELAHFPTPPPLTSQFW 120

Query: 121 LWLITWHLGLFITLTFGQIGFKGRTEDYFQK 148
           LWL+TWHLGLFI LTFGQIGFKGRTEDYFQK
Sbjct: 121 LWLVTWHLGLFICLTFGQIGFKGRTEDYFQK 151

[Close]

BLAST of CmoCh13G003810 vs. NCBI nr
Match: gi|567862998|ref|XP_006424153.1| (hypothetical protein CICLE_v10029515mg [Citrus clementina])

HSP 1 Score: 233.4 bits (594), Expect = 2.5e-58
Identity = 113/146 (77.40%), Postives = 125/146 (85.62%), Query Frame = 1


Query: 2   ASAFATSSSVVGLGSSSLSSPSSRSPRLVSEFVKPPVVARNPFGVPRSFGGRITCFQRDW 61
           A+AFA+SS VVGLGSSSLSSP   +  L S FVK PV ARNP  V  + GG++TCF+RDW
Sbjct: 3   AAAFASSSPVVGLGSSSLSSPKRTA--LGSSFVKSPVAARNPLRVAGACGGKVTCFERDW 62

Query: 62  LRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGTELAHFPSPPALTSQFWLWLIT 121
           LR DLNVIGFGLIGW+APSSIP I+GKSLTGLFFESIGTELAHFP+PP LTSQFWLWL+T
Sbjct: 63  LRTDLNVIGFGLIGWLAPSSIPAINGKSLTGLFFESIGTELAHFPTPPPLTSQFWLWLVT 122

Query: 122 WHLGLFITLTFGQIGFKGRTEDYFQK 148
           WH GLF+ LTFGQIGFKGRTEDYF K
Sbjct: 123 WHFGLFLCLTFGQIGFKGRTEDYFSK 146

[Close]

BLAST of CmoCh13G003810 vs. NCBI nr
Match: gi|566167691|ref|XP_006384772.1| (hypothetical protein POPTR_0004s20960g [Populus trichocarpa])

HSP 1 Score: 232.6 bits (592), Expect = 4.3e-58
Identity = 115/151 (76.16%), Postives = 127/151 (84.11%), Query Frame = 1


Query: 1   MASAFATSSSVVGLGSSSLSSPSS-RSPR---LVSEFVKPPVVARNPFGVPRSFGGRITC 60
           MA+ FA+ S+VVGLGS SLSSPS   SP+   L S FVK PV ARNP G+  + GG+  C
Sbjct: 1   MAATFASPSAVVGLGSGSLSSPSRISSPKKICLSSGFVKSPVTARNPLGLAGTGGGKFMC 60

Query: 61  FQRDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGTELAHFPSPPALTSQFW 120
           FQ DWLR+DLNVIGFGLIGW+APSS+P I GKSLTGLFFESIGTELAHFP+PP LTSQFW
Sbjct: 61  FQGDWLRKDLNVIGFGLIGWLAPSSVPAIGGKSLTGLFFESIGTELAHFPTPPPLTSQFW 120

Query: 121 LWLITWHLGLFITLTFGQIGFKGRTEDYFQK 148
           LWL+TWHLGLFI LTFGQIGFKGRTEDYFQK
Sbjct: 121 LWLVTWHLGLFICLTFGQIGFKGRTEDYFQK 151

The following BLAST results are available for this feature:

BLAST of CmoCh13G003810 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PSAO_ARATH	1.4e-56	70.34	Photosystem I subunit O OS=Arabidopsis thaliana GN=PSAO PE=1 SV=1	[more]

BLAST of CmoCh13G003810 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LT61_CUCSA	5.1e-66	85.71	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G168350 PE=4 SV=1	[more]
A0A067D630_CITSI	1.8e-58	77.40	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032153mg PE=4 SV=1	[more]
V4RS53_9ROSI	1.8e-58	77.40	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029515mg PE=4 SV=1	[more]
B9MYU1_POPTR	3.0e-58	76.16	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s20960g PE=4 SV=1	[more]
A0A067JJG3_JATCU	1.1e-57	77.70	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26726 PE=4 SV=1	[more]

BLAST of CmoCh13G003810 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G08380.1	7.8e-58	70.34	photosystem I subunit O	[more]

BLAST of CmoCh13G003810 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449443468\|ref\|XP_004139499.1\|	7.3e-66	85.71	PREDICTED: photosystem I subunit O [Cucumis sativus]	[more]
gi\|659127336\|ref\|XP_008463649.1\|	9.5e-66	86.39	PREDICTED: uncharacterized protein LOC103501744 [Cucumis melo]	[more]
gi\|743796878\|ref\|XP_011006585.1\|	2.5e-58	76.82	PREDICTED: photosystem I subunit O-like [Populus euphratica]	[more]
gi\|567862998\|ref\|XP_006424153.1\|	2.5e-58	77.40	hypothetical protein CICLE_v10029515mg [Citrus clementina]	[more]
gi\|566167691\|ref\|XP_006384772.1\|	4.3e-58	76.16	hypothetical protein POPTR_0004s20960g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR017498	PSI_PsaO

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030003	cellular cation homeostasis
biological_process	GO:0019344	cysteine biosynthetic process
biological_process	GO:0044763	single-organism cellular process
biological_process	GO:0044238	primary metabolic process
biological_process	GO:0019684	photosynthesis, light reaction
biological_process	GO:0071704	organic substance metabolic process
biological_process	GO:0009767	photosynthetic electron transport chain
biological_process	GO:0008150	biological_process
biological_process	GO:0006364	rRNA processing
biological_process	GO:0035304	regulation of protein dephosphorylation
biological_process	GO:0009657	plastid organization
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0009768	photosynthesis, light harvesting in photosystem I
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0070838	divalent metal ion transport
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009522	photosystem I
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh13G003810.1	CmoCh13G003810.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017498	Photosystem I PsaO	TIGRFAMs	TIGR03059	TIGR03059	coord: 67..145 score: 3.6
None	No IPR available	PANTHER	PTHR36311	FAMILY NOT NAMED	coord: 3..147 score: 1.3
None	No IPR available	PANTHER	PTHR36311:SF1	PHOTOSYSTEM I SUBUNIT O	coord: 3..147 score: 1.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh13G003810	Cucsa.319700	Cucumber (Gy14) v1	cgycmoB0880
CmoCh13G003810	CmaCh13G003520	Cucurbita maxima (Rimu)	cmacmoB218
CmoCh13G003810	CmaCh18G006410	Cucurbita maxima (Rimu)	cmacmoB398
CmoCh13G003810	Csa1G168350	Cucumber (Chinese Long) v2	cmocuB206
CmoCh13G003810	MELO3C025587	Melon (DHL92) v3.5.1	cmomeB182
CmoCh13G003810	ClCG01G011760	Watermelon (Charleston Gray)	cmowcgB171
CmoCh13G003810	CSPI01G14990	Wild cucumber (PI 183967)	cmocpiB208
CmoCh13G003810	Cp4.1LG00g01700	Cucurbita pepo (Zucchini)	cmocpeB180
CmoCh13G003810	MELO3C025587.2	Melon (DHL92) v3.6.1	cmomedB209
CmoCh13G003810	CsaV3_1G015100	Cucumber (Chinese Long) v3	cmocucB0239
CmoCh13G003810	Cla97C01G011340	Watermelon (97103) v2	cmowmbB192
CmoCh13G003810	CsGy1G014780	Cucumber (Gy14) v2	cgybcmoB072
CmoCh13G003810	Carg26504	Silver-seed gourd	carcmoB1323

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh13G003810	Bottle gourd (USVL1VR-Ls)	cmolsiB194
CmoCh13G003810	Wax gourd	cmowgoB0254
CmoCh13G003810	Cucurbita moschata (Rifu)	cmocmoB168
CmoCh13G003810	Cucurbita maxima (Rimu)	cmacmoB395