CsGy1G014780 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G014780
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	photosystem I subunit O
Location	Chr1 : 10701581 .. 10703425 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACAAATTGTCTTGTTAAAAAATATGCATTGTGATGCATGTCTTTTCTTCAAATTTAGGTTACAAATGTGGTTATTCAAATCTTGTTTTATGCTGAAAAGATATGAACTATAATTTATGGAAAATTATTCCCTTGATTTATTTAGAAATAAAAGGTCAAAAAAAATAAAAATTGGTTTCATTCTTAAACATAAACCCACAAGCACAGAGAGCACAGAGAGCAGCAGATAATTGTTTTGGTTGGATGAATGTGTATGTAAAAGAAAGGGCCCAGTTTATCGAAGAAATTCCTATGTGTCAAAGGTTGATTCATCACAAATTGATTCGCTATCCACAGCAATCAAATCTACAATCCTTCGCCAAATATTATCCACACAAAATCCCCAACAAAATCCCAATCCCTTTCCCACTCCCCTCTACAAACCAACTCCACCACCCAACCCCTAAATCCCCACTAATCTTGATCCCCACACAATGGCCACCGCCTTCGCTACCTCCTCTGTCGCCGGCCTCGGAACCGCCTCCCTCTCCTCTCCTTCCTCCAGATCTCCCCGTCTAGTCTCCGGTAATCCACTGCTACCTCCAATCAATCCATCTCCAACTCTCTCCTACCGCTCTCATTAACTTTTTGGTCTTCATTCTCGTCTTCGCAGGGTTCATCAAGCCGCCCGTGGCTGCCAGGAATCCGCTCAGCGTAGCCGGTGCATCTGGTGGAAAGTTCACCTGGTAAGAAATTTAGTGATGATGTGATTCCGAGAATGAGTGGTTGTTTGGTGTAATTTTGATATTGGTTTTGTTTTGGTGGAGTGAAGCTTTGAGAGGGATTGGCTACGGAGAGATCTGAATGTTATTGGGTTTGGACTCATCGGGTGGATTGCCCCATCAAGCATTCCGGTGATCAGTGGGAAGAGCTTGACGGGGCTGTTTTTTGAGAGCATTGGAGCAGAGCTTGCCCATTTTCCTTCTCCACCCGCCCTCACTTCTCAATTCTGGTAAATTACATTCATTTACCTTCAACTTCATTCACTTTTTTGTCTACTTTTTTGTCTACTTTTTAAATTTTAATTATGAATTTATGGTTGTTTCTAAACACTTCTCATCATCCAATATCATTCTTTTTCTATAAATTTTGGAAAACTTAACATATTCACATCAAAATTATTATAAAGTTTATAAAATTTTGTGAGATTTATTGGGTAAAATTGTAAGAAACTTGTTAGTGGTTATTTTAATTTAAATGAATGGTGTGTAATTAATTCAGGTTGTGGCTGATTACGTGGCATTTGGGTCTCTTTATTACGCTTACTTTTGGACAAATCGGATTCAAGGGAAGGACCGAAGACTACTTTTCAAAGTGAAAATGTAATAATTCTTAAAAAAAAAGGAGAGGGAATTCTAGTTTTTGTTATTATTATTATTACTCAATGTTTATAAGTTTATAACTTATAACTACTGTGTGTCCATCATTTTATTCATGTATAAATCCTTTCAACCTCCACCCCAAATTTTGCTTCACTAATCCTACTCAACACATCTCACTTAATTTTACCTTTTATCCTACTAATTAAACAACATCTTTTCAACAAAACACACTACTACTCTTACCTATAACTCCACTTCTGTCAAGGTTTAATTGCAACCATTTTACAAGTATAGTTTCACCCAAAGATTACAAACATTCTAAGCAAGTAACCTAACATTTTTTGCTTCTACCTGATTCATACCCTAAATCAGGTTTAAATCAAAGCAATATGAAAATGTAACTCATAAATAGCAAGGTTAGAGCAAAATTCTTAAACGCAAGATGTTAGTTATTAAACAAGTTACAAATATGTCTCAAAAAAAC

mRNA sequence

CACAAATTGTCTTGTTAAAAAATATGCATTGTGATGCATGTCTTTTCTTCAAATTTAGGTTACAAATGTGGTTATTCAAATCTTGTTTTATGCTGAAAAGATATGAACTATAATTTATGGAAAATTATTCCCTTGATTTATTTAGAAATAAAAGGTCAAAAAAAATAAAAATTGGTTTCATTCTTAAACATAAACCCACAAGCACAGAGAGCACAGAGAGCAGCAGATAATTGTTTTGGTTGGATGAATGTGTATGTAAAAGAAAGGGCCCAGTTTATCGAAGAAATTCCTATGTGTCAAAGGTTGATTCATCACAAATTGATTCGCTATCCACAGCAATCAAATCTACAATCCTTCGCCAAATATTATCCACACAAAATCCCCAACAAAATCCCAATCCCTTTCCCACTCCCCTCTACAAACCAACTCCACCACCCAACCCCTAAATCCCCACTAATCTTGATCCCCACACAATGGCCACCGCCTTCGCTACCTCCTCTGTCGCCGGCCTCGGAACCGCCTCCCTCTCCTCTCCTTCCTCCAGATCTCCCCGTCTAGTCTCCGGGTTCATCAAGCCGCCCGTGGCTGCCAGGAATCCGCTCAGCGTAGCCGGTGCATCTGGTGGAAAGTTCACCTGCTTTGAGAGGGATTGGCTACGGAGAGATCTGAATGTTATTGGGTTTGGACTCATCGGGTGGATTGCCCCATCAAGCATTCCGGTGATCAGTGGGAAGAGCTTGACGGGGCTGTTTTTTGAGAGCATTGGAGCAGAGCTTGCCCATTTTCCTTCTCCACCCGCCCTCACTTCTCAATTCTGGTTGTGGCTGATTACGTGGCATTTGGGTCTCTTTATTACGCTTACTTTTGGACAAATCGGATTCAAGGGAAGGACCGAAGACTACTTTTCAAAGTGAAAATGTAATAATTCTTAAAAAAAAAGGAGAGGGAATTCTAGTTTTTGTTATTATTATTATTACTCAATGTTTATAAGTTTATAACTTATAACTACTGTGTGTCCATCATTTTATTCATGTATAAATCCTTTCAACCTCCACCCCAAATTTTGCTTCACTAATCCTACTCAACACATCTCACTTAATTTTACCTTTTATCCTACTAATTAAACAACATCTTTTCAACAAAACACACTACTACTCTTACCTATAACTCCACTTCTGTCAAGGTTTAATTGCAACCATTTTACAAGTATAGTTTCACCCAAAGATTACAAACATTCTAAGCAAGTAACCTAACATTTTTTGCTTCTACCTGATTCATACCCTAAATCAGGTTTAAATCAAAGCAATATGAAAATGTAACTCATAAATAGCAAGGTTAGAGCAAAATTCTTAAACGCAAGATGTTAGTTATTAAACAAGTTACAAATATGTCTCAAAAAAAC

Coding sequence (CDS)

ATGGCCACCGCCTTCGCTACCTCCTCTGTCGCCGGCCTCGGAACCGCCTCCCTCTCCTCTCCTTCCTCCAGATCTCCCCGTCTAGTCTCCGGGTTCATCAAGCCGCCCGTGGCTGCCAGGAATCCGCTCAGCGTAGCCGGTGCATCTGGTGGAAAGTTCACCTGCTTTGAGAGGGATTGGCTACGGAGAGATCTGAATGTTATTGGGTTTGGACTCATCGGGTGGATTGCCCCATCAAGCATTCCGGTGATCAGTGGGAAGAGCTTGACGGGGCTGTTTTTTGAGAGCATTGGAGCAGAGCTTGCCCATTTTCCTTCTCCACCCGCCCTCACTTCTCAATTCTGGTTGTGGCTGATTACGTGGCATTTGGGTCTCTTTATTACGCTTACTTTTGGACAAATCGGATTCAAGGGAAGGACCGAAGACTACTTTTCAAAGTGA

Protein sequence

MATAFATSSVAGLGTASLSSPSSRSPRLVSGFIKPPVAARNPLSVAGASGGKFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVISGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK

Homology

[Close]

BLAST of CsGy1G014780 vs. NCBI nr
Match: XP_004139499.1 (PREDICTED: photosystem I subunit O [Cucumis sativus] >KGN64958.1 hypothetical protein Csa_1G168350 [Cucumis sativus])

HSP 1 Score: 295.4 bits (755), Expect = 1.0e-76
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MATAFATSSVAGLGTASLSSPSSRSPRLVSGFIKPPVAARNPLSVAGASGGKFTCFERDW 60
           MATAFATSSVAGLGTASLSSPSSRSPRLVSGFIKPPVAARNPLSVAGASGGKFTCFERDW
Sbjct: 1   MATAFATSSVAGLGTASLSSPSSRSPRLVSGFIKPPVAARNPLSVAGASGGKFTCFERDW 60

Query: 61  LRRDLNVIGFGLIGWIAPSSIPVISGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLIT 120
           LRRDLNVIGFGLIGWIAPSSIPVISGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLIT
Sbjct: 61  LRRDLNVIGFGLIGWIAPSSIPVISGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLIT 120

Query: 121 WHLGLFITLTFGQIGFKGRTEDYFSK 147
           WHLGLFITLTFGQIGFKGRTEDYFSK
Sbjct: 121 WHLGLFITLTFGQIGFKGRTEDYFSK 146

[Close]

BLAST of CsGy1G014780 vs. NCBI nr
Match: XP_008463649.1 (PREDICTED: photosystem I subunit O [Cucumis melo])

HSP 1 Score: 279.6 bits (714), Expect = 5.9e-72
Identity = 138/146 (94.52%), Postives = 141/146 (96.58%), Query Frame = 0


Query: 1   MATAFATSSVAGLGTASLSSPSSRSPRLVSGFIKPPVAARNPLSVAGASGGKFTCFERDW 60
           MATAFATSSVAGLGTASLSSPSSRSPRLVSGFIK PVAARNPL+V  AS G+FTCFERDW
Sbjct: 1   MATAFATSSVAGLGTASLSSPSSRSPRLVSGFIKSPVAARNPLNVGRASRGRFTCFERDW 60

Query: 61  LRRDLNVIGFGLIGWIAPSSIPVISGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLIT 120
           LRRDLNVIGFGLIGWIAPSSIPVI+GKSLTGLFFESIG ELAHFPSPPALTSQFWLWLIT
Sbjct: 61  LRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGTELAHFPSPPALTSQFWLWLIT 120

Query: 121 WHLGLFITLTFGQIGFKGRTEDYFSK 147
           WHLGLFITLTFGQIGFKGRTEDYFSK
Sbjct: 121 WHLGLFITLTFGQIGFKGRTEDYFSK 146

[Close]

BLAST of CsGy1G014780 vs. NCBI nr
Match: XP_022973174.1 (photosystem I subunit O [Cucurbita maxima])

HSP 1 Score: 268.5 bits (685), Expect = 1.4e-68
Identity = 132/147 (89.80%), Postives = 138/147 (93.88%), Query Frame = 0


Query: 1   MATAFAT-SSVAGLGTASLSSPSSRSPRLVSGFIKPPVAARNPLSVAGASGGKFTCFERD 60
           MA+AFAT SSV GLG++SLSSPSSRSPRLVSGFIKPPV ARNP  VA + GG+FTCF+RD
Sbjct: 1   MASAFATSSSVVGLGSSSLSSPSSRSPRLVSGFIKPPVVARNPFGVARSFGGRFTCFQRD 60

Query: 61  WLRRDLNVIGFGLIGWIAPSSIPVISGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI 120
           WLRRDLNVIGFGLIGWIAPSSIPVI GKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI
Sbjct: 61  WLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI 120

Query: 121 TWHLGLFITLTFGQIGFKGRTEDYFSK 147
           TWHLGLFITLTFGQIGFKGRTEDYF K
Sbjct: 121 TWHLGLFITLTFGQIGFKGRTEDYFQK 147

[Close]

BLAST of CsGy1G014780 vs. NCBI nr
Match: XP_022142590.1 (photosystem I subunit O [Momordica charantia])

HSP 1 Score: 265.0 bits (676), Expect = 1.5e-67
Identity = 132/148 (89.19%), Postives = 140/148 (94.59%), Query Frame = 0


Query: 1   MATAFATSS-VAGLG-TASLSSPSSRSPRLVSGFIKPPVAARNPLSVAGASGGKFTCFER 60
           MATAFATSS + GLG ++SLSSPSSRSPRL S F+K P AARNPLSVA ASGG+FTCFER
Sbjct: 1   MATAFATSSTIVGLGRSSSLSSPSSRSPRLASVFVKSPAAARNPLSVARASGGRFTCFER 60

Query: 61  DWLRRDLNVIGFGLIGWIAPSSIPVISGKSLTGLFFESIGAELAHFPSPPALTSQFWLWL 120
           DWLRRDLNVIGFGLIGW+APSSIPVI+GKSLTGLFFESIGAELAHFPSPPALTSQFWLWL
Sbjct: 61  DWLRRDLNVIGFGLIGWLAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWL 120

Query: 121 ITWHLGLFITLTFGQIGFKGRTEDYFSK 147
           +TWHLGLFITLTFGQIGFKGRTEDYFSK
Sbjct: 121 VTWHLGLFITLTFGQIGFKGRTEDYFSK 148

[Close]

BLAST of CsGy1G014780 vs. NCBI nr
Match: XP_023520691.1 (photosystem I subunit O [Cucurbita pepo subsp. pepo])

HSP 1 Score: 261.2 bits (666), Expect = 2.2e-66
Identity = 128/147 (87.07%), Postives = 135/147 (91.84%), Query Frame = 0


Query: 1   MATAFAT-SSVAGLGTASLSSPSSRSPRLVSGFIKPPVAARNPLSVAGASGGKFTCFERD 60
           MA+AFAT SSV GLG++SLSSPSSRSPRLVS F+KPPV ARNP  VA + GG+ TCF+RD
Sbjct: 1   MASAFATSSSVVGLGSSSLSSPSSRSPRLVSEFVKPPVVARNPFGVARSFGGRITCFQRD 60

Query: 61  WLRRDLNVIGFGLIGWIAPSSIPVISGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI 120
           WLRRDLNVIGFGLIGWIAPSSIPVI GKSLTGLFFESIG ELAHFPSPPALTSQFWLWLI
Sbjct: 61  WLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGTELAHFPSPPALTSQFWLWLI 120

Query: 121 TWHLGLFITLTFGQIGFKGRTEDYFSK 147
           TWHLGLFITLTFGQIGFKGRTEDYF K
Sbjct: 121 TWHLGLFITLTFGQIGFKGRTEDYFQK 147

[Close]

BLAST of CsGy1G014780 vs. TAIR10
Match: AT1G08380.1 (photosystem I subunit O)

HSP 1 Score: 219.9 bits (559), Expect = 1.0e-57
Identity = 105/145 (72.41%), Postives = 124/145 (85.52%), Query Frame = 0


Query: 1   MATAFAT-SSVAGLGTASLSSPSSRSPRLVSGFIKPPVAARNPLSVAGASGGKFTCFERD 60
           MA  FAT S+V GLG +S+++         S F+KP ++A+NPL +AGASGG+ TCFER+
Sbjct: 1   MAATFATPSTVIGLGGSSITTKP-----FSSSFLKPTLSAKNPLRLAGASGGRVTCFERN 60

Query: 61  WLRRDLNVIGFGLIGWIAPSSIPVISGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI 120
           WLRRDLNV+GFGLIGW+APSSIP I+GKSLTGLFF+SIG ELAHFP+PPALTSQFWLWL+
Sbjct: 61  WLRRDLNVVGFGLIGWLAPSSIPAINGKSLTGLFFDSIGTELAHFPTPPALTSQFWLWLV 120

Query: 121 TWHLGLFITLTFGQIGFKGRTEDYF 145
           TWHLGLF+ LTFGQIGFKGRTEDYF
Sbjct: 121 TWHLGLFLCLTFGQIGFKGRTEDYF 140

[Close]

BLAST of CsGy1G014780 vs. Swiss-Prot
Match: sp|Q949Q5|PSAO_ARATH (Photosystem I subunit O OS=Arabidopsis thaliana OX=3702 GN=PSAO PE=1 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 1.8e-56
Identity = 105/145 (72.41%), Postives = 124/145 (85.52%), Query Frame = 0


Query: 1   MATAFAT-SSVAGLGTASLSSPSSRSPRLVSGFIKPPVAARNPLSVAGASGGKFTCFERD 60
           MA  FAT S+V GLG +S+++         S F+KP ++A+NPL +AGASGG+ TCFER+
Sbjct: 1   MAATFATPSTVIGLGGSSITTKP-----FSSSFLKPTLSAKNPLRLAGASGGRVTCFERN 60

Query: 61  WLRRDLNVIGFGLIGWIAPSSIPVISGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI 120
           WLRRDLNV+GFGLIGW+APSSIP I+GKSLTGLFF+SIG ELAHFP+PPALTSQFWLWL+
Sbjct: 61  WLRRDLNVVGFGLIGWLAPSSIPAINGKSLTGLFFDSIGTELAHFPTPPALTSQFWLWLV 120

Query: 121 TWHLGLFITLTFGQIGFKGRTEDYF 145
           TWHLGLF+ LTFGQIGFKGRTEDYF
Sbjct: 121 TWHLGLFLCLTFGQIGFKGRTEDYF 140

[Close]

BLAST of CsGy1G014780 vs. TrEMBL
Match: tr|A0A0A0LT61|A0A0A0LT61_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G168350 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 6.9e-77
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MATAFATSSVAGLGTASLSSPSSRSPRLVSGFIKPPVAARNPLSVAGASGGKFTCFERDW 60
           MATAFATSSVAGLGTASLSSPSSRSPRLVSGFIKPPVAARNPLSVAGASGGKFTCFERDW
Sbjct: 1   MATAFATSSVAGLGTASLSSPSSRSPRLVSGFIKPPVAARNPLSVAGASGGKFTCFERDW 60

Query: 61  LRRDLNVIGFGLIGWIAPSSIPVISGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLIT 120
           LRRDLNVIGFGLIGWIAPSSIPVISGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLIT
Sbjct: 61  LRRDLNVIGFGLIGWIAPSSIPVISGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLIT 120

Query: 121 WHLGLFITLTFGQIGFKGRTEDYFSK 147
           WHLGLFITLTFGQIGFKGRTEDYFSK
Sbjct: 121 WHLGLFITLTFGQIGFKGRTEDYFSK 146

[Close]

BLAST of CsGy1G014780 vs. TrEMBL
Match: tr|A0A1S3CJR4|A0A1S3CJR4_CUCME (photosystem I subunit O OS=Cucumis melo OX=3656 GN=LOC103501744 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 3.9e-72
Identity = 138/146 (94.52%), Postives = 141/146 (96.58%), Query Frame = 0


Query: 1   MATAFATSSVAGLGTASLSSPSSRSPRLVSGFIKPPVAARNPLSVAGASGGKFTCFERDW 60
           MATAFATSSVAGLGTASLSSPSSRSPRLVSGFIK PVAARNPL+V  AS G+FTCFERDW
Sbjct: 1   MATAFATSSVAGLGTASLSSPSSRSPRLVSGFIKSPVAARNPLNVGRASRGRFTCFERDW 60

Query: 61  LRRDLNVIGFGLIGWIAPSSIPVISGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLIT 120
           LRRDLNVIGFGLIGWIAPSSIPVI+GKSLTGLFFESIG ELAHFPSPPALTSQFWLWLIT
Sbjct: 61  LRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGTELAHFPSPPALTSQFWLWLIT 120

Query: 121 WHLGLFITLTFGQIGFKGRTEDYFSK 147
           WHLGLFITLTFGQIGFKGRTEDYFSK
Sbjct: 121 WHLGLFITLTFGQIGFKGRTEDYFSK 146

[Close]

BLAST of CsGy1G014780 vs. TrEMBL
Match: tr|A0A2I4GXZ5|A0A2I4GXZ5_9ROSI (photosystem I subunit O OS=Juglans regia OX=51240 GN=LOC109011866 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 5.8e-60
Identity = 119/150 (79.33%), Postives = 128/150 (85.33%), Query Frame = 0


Query: 1   MATAFATSS-VAGLGTASLSSPS-----SRSPRLVSGFIKPPVAARNPLSVAGASGGKFT 60
           MA  FATSS + GLGT+SL+SPS      RS  L SGF+K  VA RNPLS AGASGGKFT
Sbjct: 1   MAATFATSSTIIGLGTSSLASPSRASVGKRSSCLTSGFVKSSVAVRNPLSQAGASGGKFT 60

Query: 61  CFERDWLRRDLNVIGFGLIGWIAPSSIPVISGKSLTGLFFESIGAELAHFPSPPALTSQF 120
           CFER+WLR D NVIGFGLIGW+APSSIP I GKSLTGLFFESIGAEL+HFP+PPALTSQF
Sbjct: 61  CFERNWLRTDFNVIGFGLIGWLAPSSIPAIDGKSLTGLFFESIGAELSHFPTPPALTSQF 120

Query: 121 WLWLITWHLGLFITLTFGQIGFKGRTEDYF 145
           WLWL+TWHLGLFI LTFGQIGFKGRTEDYF
Sbjct: 121 WLWLVTWHLGLFIVLTFGQIGFKGRTEDYF 150

[Close]

BLAST of CsGy1G014780 vs. TrEMBL
Match: tr|A0A067JJG3|A0A067JJG3_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_26726 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 2.2e-59
Identity = 119/148 (80.41%), Postives = 129/148 (87.16%), Query Frame = 0


Query: 1   MATAFATSS-VAGLGTASLSSPSSRSPR---LVSGFIKPPVAARNPLSVAGASGGKFTCF 60
           MA AFATSS V GLG++SLSSP S S R   L SGF+K    ARNPL  AG++GGKF CF
Sbjct: 1   MAAAFATSSTVIGLGSSSLSSPRSCSCRRTCLSSGFVKSVATARNPLRQAGSNGGKFMCF 60

Query: 61  ERDWLRRDLNVIGFGLIGWIAPSSIPVISGKSLTGLFFESIGAELAHFPSPPALTSQFWL 120
           ERDWLRRDLNVIGFGLIGW+APSSIP I+GKSLTGLFFESIGAELAHFP+PPALTSQFWL
Sbjct: 61  ERDWLRRDLNVIGFGLIGWLAPSSIPAINGKSLTGLFFESIGAELAHFPTPPALTSQFWL 120

Query: 121 WLITWHLGLFITLTFGQIGFKGRTEDYF 145
           WL+TWHLGLF+ LTFGQIGFKGRTEDYF
Sbjct: 121 WLVTWHLGLFLCLTFGQIGFKGRTEDYF 148

[Close]

BLAST of CsGy1G014780 vs. TrEMBL
Match: tr|A0A2P5CW72|A0A2P5CW72_9ROSA (Photosystem I PsaO OS=Trema orientalis OX=63057 GN=TorRG33x02_271370 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 2.9e-59
Identity = 118/145 (81.38%), Postives = 127/145 (87.59%), Query Frame = 0


Query: 1   MATAFAT-SSVAGLGTASLSSPSSRSPRLVSGFIKPPVAARNPLSVAGASGGKFTCFERD 60
           MA  FA+ S+V GLGT+SLSSP  +   L SGF+K  V ARNPL  A ASGGKFTCFERD
Sbjct: 1   MAATFASASTVVGLGTSSLSSP--KRTTLSSGFLKSSVTARNPLRQARASGGKFTCFERD 60

Query: 61  WLRRDLNVIGFGLIGWIAPSSIPVISGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI 120
           WLRRD NVIGFGLIGWIAPSSIPVI+GKSLTGLFFESIGAELAHFP+PPALTSQFWLWL+
Sbjct: 61  WLRRDFNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGAELAHFPTPPALTSQFWLWLV 120

Query: 121 TWHLGLFITLTFGQIGFKGRTEDYF 145
           TWHLGLFI LTFGQIGFKGRT+DYF
Sbjct: 121 TWHLGLFIVLTFGQIGFKGRTDDYF 143

The following BLAST results are available for this feature:

BLAST of CsGy1G014780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139499.1	1.0e-76	100.00	PREDICTED: photosystem I subunit O [Cucumis sativus] >KGN64958.1 hypothetical pr...	[more]
XP_008463649.1	5.9e-72	94.52	PREDICTED: photosystem I subunit O [Cucumis melo]	[more]
XP_022973174.1	1.4e-68	89.80	photosystem I subunit O [Cucurbita maxima]	[more]
XP_022142590.1	1.5e-67	89.19	photosystem I subunit O [Momordica charantia]	[more]
XP_023520691.1	2.2e-66	87.07	photosystem I subunit O [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy1G014780 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G08380.1	1.0e-57	72.41	photosystem I subunit O	[more]

BLAST of CsGy1G014780 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q949Q5\|PSAO_ARATH	1.8e-56	72.41	Photosystem I subunit O OS=Arabidopsis thaliana OX=3702 GN=PSAO PE=1 SV=1	[more]

BLAST of CsGy1G014780 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LT61\|A0A0A0LT61_CUCSA	6.9e-77	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G168350 PE=4 SV=1	[more]
tr\|A0A1S3CJR4\|A0A1S3CJR4_CUCME	3.9e-72	94.52	photosystem I subunit O OS=Cucumis melo OX=3656 GN=LOC103501744 PE=4 SV=1	[more]
tr\|A0A2I4GXZ5\|A0A2I4GXZ5_9ROSI	5.8e-60	79.33	photosystem I subunit O OS=Juglans regia OX=51240 GN=LOC109011866 PE=4 SV=1	[more]
tr\|A0A067JJG3\|A0A067JJG3_JATCU	2.2e-59	80.41	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_26726 PE=4 SV=1	[more]
tr\|A0A2P5CW72\|A0A2P5CW72_9ROSA	2.9e-59	81.38	Photosystem I PsaO OS=Trema orientalis OX=63057 GN=TorRG33x02_271370 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR017498	PSI_PsaO

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009767	photosynthetic electron transport chain
biological_process	GO:0008150	biological_process
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G014780.1	CsGy1G014780.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017498	Photosystem I PsaO	TIGRFAM	TIGR03059	TIGR03059	coord: 66..144 e-value: 6.9E-39 score: 130.2
IPR017498	Photosystem I PsaO	PANTHER	PTHR36311	FAMILY NOT NAMED	coord: 1..144

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy1G014780	Csa1G168350	Cucumber (Chinese Long) v2	cgybcuB001
CsGy1G014780	MELO3C025587	Melon (DHL92) v3.5.1	cgybmeB028
CsGy1G014780	ClCG01G011760	Watermelon (Charleston Gray)	cgybwcgB021
CsGy1G014780	CSPI01G14990	Wild cucumber (PI 183967)	cgybcpiB001
CsGy1G014780	CmaCh13G003520	Cucurbita maxima (Rimu)	cgybcmaB078
CsGy1G014780	CmoCh13G003810	Cucurbita moschata (Rifu)	cgybcmoB072
CsGy1G014780	Cp4.1LG00g01700	Cucurbita pepo (Zucchini)	cgybcpeB005
CsGy1G014780	MELO3C025587.2	Melon (DHL92) v3.6.1	cgybmedB009
CsGy1G014780	CsaV3_1G015100	Cucumber (Chinese Long) v3	cgybcucB002
CsGy1G014780	Cla97C01G011340	Watermelon (97103) v2	cgybwmbB009
CsGy1G014780	Carg26504	Silver-seed gourd	carcgybB0971

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy1G014780	Cucurbita maxima (Rimu)	cgybcmaB095
CsGy1G014780	Cucurbita maxima (Rimu)	cgybcmaB119
CsGy1G014780	Cucurbita maxima (Rimu)	cgybcmaB123
CsGy1G014780	Cucurbita maxima (Rimu)	cgybcmaB139
CsGy1G014780	Cucurbita moschata (Rifu)	cgybcmoB085
CsGy1G014780	Cucurbita moschata (Rifu)	cgybcmoB113
CsGy1G014780	Cucurbita moschata (Rifu)	cgybcmoB130
CsGy1G014780	Cucurbita pepo (Zucchini)	cgybcpeB007
CsGy1G014780	Cucurbita pepo (Zucchini)	cgybcpeB150
CsGy1G014780	Bottle gourd (USVL1VR-Ls)	cgyblsiB005
CsGy1G014780	Bottle gourd (USVL1VR-Ls)	cgyblsiB017
CsGy1G014780	Bottle gourd (USVL1VR-Ls)	cgyblsiB029
CsGy1G014780	Melon (DHL92) v3.5.1	cgybmeB016
CsGy1G014780	Melon (DHL92) v3.5.1	cgybmeB061
CsGy1G014780	Melon (DHL92) v3.6.1	cgybmedB057
CsGy1G014780	Watermelon (Charleston Gray)	cgybwcgB027
CsGy1G014780	Watermelon (97103) v1	cgybwmB007
CsGy1G014780	Watermelon (97103) v1	cgybwmB043
CsGy1G014780	Watermelon (97103) v1	cgybwmB060
CsGy1G014780	Watermelon (97103) v1	cgybwmB067
CsGy1G014780	Wild cucumber (PI 183967)	cgybcpiB021
CsGy1G014780	Silver-seed gourd	carcgybB0000
CsGy1G014780	Silver-seed gourd	carcgybB0904
CsGy1G014780	Watermelon (97103) v2	cgybwmbB019
CsGy1G014780	Watermelon (97103) v2	cgybwmbB026
CsGy1G014780	Wax gourd	cgybwgoB046