Csa1G168350 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G168350
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionSex-linked protein 9; contains IPR017498 (Photosystem I PsaO)
LocationChr1 : 10449173 .. 10450542 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAGAGAGCACAGAGAGCAGCAGATAATTGTTTTGGTTGGATGAATGTGTATGTAATAGAAAGGGCCCAGTTTATCGAAGAAATTCCTATGTGTCAAAGGTTGATTCATCACAAATTGATTCGCTATCCACAGCAATCAAATCTACAATCCTTCGCCAAATATTATCCACACAAAATCCCCAACAAAATCCCAATCCCTTTCCCACTCCCCTCTACAAACCAACTCCACCACCCAACCCCTAAATCCCCACTAATCTTGATCCCCACACAATGGCCACCGCCTTCGCTACCTCCTCTGTCGCCGGCCTCGGAACCGCCTCCCTCTCCTCTCCTTCCTCCAGGTCTCCCCGTCTAGTCTCCGGTAATCCACTGCTACCTCCAATCAATCCATCTCCAACTCTCTCCTACCGCTCTCATTAACTTTTTGGTCTTCATTCTCGTCTTCGCAGGGTTCATCAAGCCGCCCGTGGCTGCCAGGAATCCGCTCAGCGTAGCCGGTGCATCTGGTGGAAAGTTCACCTGGTAAGAAATTTAGTGATGATGTGATTCCGAGAATGAGTGGTTGTTTGGTGTAATTTTGATATTGGTTTTGTTTTGGTGGAGTGAAGCTTTGAGAGGGATTGGCTACGGAGAGATCTGAATGTTATTGGGTTTGGACTCATCGGGTGGATTGCCCCATCAAGCATTCCGGTGATCAGTGGGAAGAGCTTGACGGGGCTGTTTTTTGAGAGCATTGGAGCAGAGCTTGCCCATTTTCCTTCTCCACCCGCCCTCACTTCTCAATTCTGGTAAATTACATTCATTTACCTTTAACTTCATTCACTTTTTTTGTCTACTTTTTAAATTTTAATTATGAATTTATGGTTGTTTCTAAACACTTCTCATAATCCAATATCATTCTTCTTCTATAAGTTTTGGAAAACTTAACATAATTCACATCAAAATTATTATAAAGTTTATAAAATTTTGTGAGATTTATTGGGTAAAATTGTAAGAAACTTGTTAGTGGTTATTTTAATTTAAATGAATGATGTGTAATTAATCCAGGTTGTGGCTGATTACGTGGCATTTGGGTCTCTTTATTACGCTTACTTTTGGACAAATCGGATTCAAGGGAAGGACCGAAGACTACTTTTCAAAGTGAAAATGTAATAATTCTTAAAAAAAAAGGAGAGGGAATTCTAGTTTTTGTTATTATTATTATCACTCAATGTTTATAAGTTTATAACTTATAACTACTGTGTGTCCATCATTTTATTCATGTATAAATCCTTTCAACCTCCACCCCAAATTTTGCTTCACTAATCCTACTCAACACATCTCACTTAATTTTACCTTTTATCCTACTAATTAAACAACATCTTTTCAAC

mRNA sequence

ATGGCCACCGCCTTCGCTACCTCCTCTGTCGCCGGCCTCGGAACCGCCTCCCTCTCCTCTCCTTCCTCCAGGTCTCCCCGTCTAGTCTCCGGGTTCATCAAGCCGCCCGTGGCTGCCAGGAATCCGCTCAGCGTAGCCGGTGCATCTGGTGGAAAGTTCACCTGCTTTGAGAGGGATTGGCTACGGAGAGATCTGAATGTTATTGGGTTTGGACTCATCGGGTGGATTGCCCCATCAAGCATTCCGGTGATCAGTGGGAAGAGCTTGACGGGGCTGTTTTTTGAGAGCATTGGAGCAGAGCTTGCCCATTTTCCTTCTCCACCCGCCCTCACTTCTCAATTCTGGTTGTGGCTGATTACGTGGCATTTGGGTCTCTTTATTACGCTTACTTTTGGACAAATCGGATTCAAGGGAAGGACCGAAGACTACTTTTCAAAGTGA

Coding sequence (CDS)

ATGGCCACCGCCTTCGCTACCTCCTCTGTCGCCGGCCTCGGAACCGCCTCCCTCTCCTCTCCTTCCTCCAGGTCTCCCCGTCTAGTCTCCGGGTTCATCAAGCCGCCCGTGGCTGCCAGGAATCCGCTCAGCGTAGCCGGTGCATCTGGTGGAAAGTTCACCTGCTTTGAGAGGGATTGGCTACGGAGAGATCTGAATGTTATTGGGTTTGGACTCATCGGGTGGATTGCCCCATCAAGCATTCCGGTGATCAGTGGGAAGAGCTTGACGGGGCTGTTTTTTGAGAGCATTGGAGCAGAGCTTGCCCATTTTCCTTCTCCACCCGCCCTCACTTCTCAATTCTGGTTGTGGCTGATTACGTGGCATTTGGGTCTCTTTATTACGCTTACTTTTGGACAAATCGGATTCAAGGGAAGGACCGAAGACTACTTTTCAAAGTGA

Protein sequence

MATAFATSSVAGLGTASLSSPSSRSPRLVSGFIKPPVAARNPLSVAGASGGKFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVISGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK*
Homology
[Close]
BLAST of Csa1G168350 vs. Swiss-Prot
Match: PSAO_ARATH (Photosystem I subunit O OS=Arabidopsis thaliana GN=PSAO PE=1 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 3.6e-57
Identity = 105/145 (72.41%), Postives = 122/145 (84.14%), Query Frame = 1 

Query: 1   MATAFAT-SSVAGLGTASLSSPSSRSPRLVSGFIKPPVAARNPLSVAGASGGKFTCFERD 60
           MA  FAT S+V GLG +S+++         S F+KP ++A+NPL +AGASGG+ TCFER+
Sbjct: 1   MAATFATPSTVIGLGGSSITTKP-----FSSSFLKPTLSAKNPLRLAGASGGRVTCFERN 60

Query: 61  WLRRDLNVIGFGLIGWIAPSSIPVISGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI 120
           WLRRDLNV+GFGLIGW+APSSIP I+GKSLTGLFF+SIG ELAHFP+PPALTSQFWLWL+
Sbjct: 61  WLRRDLNVVGFGLIGWLAPSSIPAINGKSLTGLFFDSIGTELAHFPTPPALTSQFWLWLV 120

Query: 121 TWHLGLFITLTFGQIGFKGRTEDYF 145
           TWHLGLF+ LTFGQIGFKGRTEDYF
Sbjct: 121 TWHLGLFLCLTFGQIGFKGRTEDYF 140

[Close]
BLAST of Csa1G168350 vs. TrEMBL
Match: A0A0A0LT61_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G168350 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 5.8e-78
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 1 

Query: 1   MATAFATSSVAGLGTASLSSPSSRSPRLVSGFIKPPVAARNPLSVAGASGGKFTCFERDW 60
           MATAFATSSVAGLGTASLSSPSSRSPRLVSGFIKPPVAARNPLSVAGASGGKFTCFERDW
Sbjct: 1   MATAFATSSVAGLGTASLSSPSSRSPRLVSGFIKPPVAARNPLSVAGASGGKFTCFERDW 60

Query: 61  LRRDLNVIGFGLIGWIAPSSIPVISGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLIT 120
           LRRDLNVIGFGLIGWIAPSSIPVISGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLIT
Sbjct: 61  LRRDLNVIGFGLIGWIAPSSIPVISGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLIT 120

Query: 121 WHLGLFITLTFGQIGFKGRTEDYFSK 147
           WHLGLFITLTFGQIGFKGRTEDYFSK
Sbjct: 121 WHLGLFITLTFGQIGFKGRTEDYFSK 146

[Close]
BLAST of Csa1G168350 vs. TrEMBL
Match: A0A067JJG3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26726 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 1.9e-60
Identity = 119/148 (80.41%), Postives = 129/148 (87.16%), Query Frame = 1 

Query: 1   MATAFATSS-VAGLGTASLSSPSSRSPR---LVSGFIKPPVAARNPLSVAGASGGKFTCF 60
           MA AFATSS V GLG++SLSSP S S R   L SGF+K    ARNPL  AG++GGKF CF
Sbjct: 1   MAAAFATSSTVIGLGSSSLSSPRSCSCRRTCLSSGFVKSVATARNPLRQAGSNGGKFMCF 60

Query: 61  ERDWLRRDLNVIGFGLIGWIAPSSIPVISGKSLTGLFFESIGAELAHFPSPPALTSQFWL 120
           ERDWLRRDLNVIGFGLIGW+APSSIP I+GKSLTGLFFESIGAELAHFP+PPALTSQFWL
Sbjct: 61  ERDWLRRDLNVIGFGLIGWLAPSSIPAINGKSLTGLFFESIGAELAHFPTPPALTSQFWL 120

Query: 121 WLITWHLGLFITLTFGQIGFKGRTEDYF 145
           WL+TWHLGLF+ LTFGQIGFKGRTEDYF
Sbjct: 121 WLVTWHLGLFLCLTFGQIGFKGRTEDYF 148

[Close]
BLAST of Csa1G168350 vs. TrEMBL
Match: A0A166C9D6_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_012226 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 1.2e-59
Identity = 113/146 (77.40%), Postives = 127/146 (86.99%), Query Frame = 1 

Query: 4   AFATSSVAGLGTASLSSPS-----SRSPRLVSGFIKPPVAARNPLSVAGASGGKFTCFER 63
           A  TS++ GLGT+SLSSPS      ++  L SGF++ PVAARNPL +A ASGGKFTCFE+
Sbjct: 2   AATTSTIVGLGTSSLSSPSHLVSAKQTVSLTSGFLRSPVAARNPLRLAQASGGKFTCFEQ 61

Query: 64  DWLRRDLNVIGFGLIGWIAPSSIPVISGKSLTGLFFESIGAELAHFPSPPALTSQFWLWL 123
           +WLRRDLNVIGFGLIGW+APSSIP+I+G SLTGLFF SIG ELAHFPSPPALTSQFWLWL
Sbjct: 62  NWLRRDLNVIGFGLIGWLAPSSIPIINGDSLTGLFFSSIGTELAHFPSPPALTSQFWLWL 121

Query: 124 ITWHLGLFITLTFGQIGFKGRTEDYF 145
           +TWHLGLFI LTFGQIGFKGRTEDYF
Sbjct: 122 VTWHLGLFICLTFGQIGFKGRTEDYF 147

[Close]
BLAST of Csa1G168350 vs. TrEMBL
Match: V4RS53_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029515mg PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 1.6e-59
Identity = 116/146 (79.45%), Postives = 126/146 (86.30%), Query Frame = 1 

Query: 2   ATAFATSS-VAGLGTASLSSPSSRSPRLVSGFIKPPVAARNPLSVAGASGGKFTCFERDW 61
           A AFA+SS V GLG++SLSSP   +  L S F+K PVAARNPL VAGA GGK TCFERDW
Sbjct: 3   AAAFASSSPVVGLGSSSLSSPKRTA--LGSSFVKSPVAARNPLRVAGACGGKVTCFERDW 62

Query: 62  LRRDLNVIGFGLIGWIAPSSIPVISGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLIT 121
           LR DLNVIGFGLIGW+APSSIP I+GKSLTGLFFESIG ELAHFP+PP LTSQFWLWL+T
Sbjct: 63  LRTDLNVIGFGLIGWLAPSSIPAINGKSLTGLFFESIGTELAHFPTPPPLTSQFWLWLVT 122

Query: 122 WHLGLFITLTFGQIGFKGRTEDYFSK 147
           WH GLF+ LTFGQIGFKGRTEDYFSK
Sbjct: 123 WHFGLFLCLTFGQIGFKGRTEDYFSK 146

[Close]
BLAST of Csa1G168350 vs. TrEMBL
Match: A0A067D630_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032153mg PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 1.6e-59
Identity = 116/146 (79.45%), Postives = 126/146 (86.30%), Query Frame = 1 

Query: 2   ATAFATSS-VAGLGTASLSSPSSRSPRLVSGFIKPPVAARNPLSVAGASGGKFTCFERDW 61
           A AFA+SS V GLG++SLSSP   +  L S F+K PVAARNPL VAGA GGK TCFERDW
Sbjct: 3   AAAFASSSPVVGLGSSSLSSPKRTA--LGSSFVKSPVAARNPLRVAGACGGKVTCFERDW 62

Query: 62  LRRDLNVIGFGLIGWIAPSSIPVISGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLIT 121
           LR DLNVIGFGLIGW+APSSIP I+GKSLTGLFFESIG ELAHFP+PP LTSQFWLWL+T
Sbjct: 63  LRTDLNVIGFGLIGWLAPSSIPAINGKSLTGLFFESIGTELAHFPTPPPLTSQFWLWLVT 122

Query: 122 WHLGLFITLTFGQIGFKGRTEDYFSK 147
           WH GLF+ LTFGQIGFKGRTEDYFSK
Sbjct: 123 WHFGLFLCLTFGQIGFKGRTEDYFSK 146

[Close]
BLAST of Csa1G168350 vs. TAIR10
Match: AT1G08380.1 (AT1G08380.1 photosystem I subunit O)

HSP 1 Score: 222.2 bits (565), Expect = 2.0e-58
Identity = 105/145 (72.41%), Postives = 122/145 (84.14%), Query Frame = 1 

Query: 1   MATAFAT-SSVAGLGTASLSSPSSRSPRLVSGFIKPPVAARNPLSVAGASGGKFTCFERD 60
           MA  FAT S+V GLG +S+++         S F+KP ++A+NPL +AGASGG+ TCFER+
Sbjct: 1   MAATFATPSTVIGLGGSSITTKP-----FSSSFLKPTLSAKNPLRLAGASGGRVTCFERN 60

Query: 61  WLRRDLNVIGFGLIGWIAPSSIPVISGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI 120
           WLRRDLNV+GFGLIGW+APSSIP I+GKSLTGLFF+SIG ELAHFP+PPALTSQFWLWL+
Sbjct: 61  WLRRDLNVVGFGLIGWLAPSSIPAINGKSLTGLFFDSIGTELAHFPTPPALTSQFWLWLV 120

Query: 121 TWHLGLFITLTFGQIGFKGRTEDYF 145
           TWHLGLF+ LTFGQIGFKGRTEDYF
Sbjct: 121 TWHLGLFLCLTFGQIGFKGRTEDYF 140

[Close]
BLAST of Csa1G168350 vs. NCBI nr
Match: gi|449443468|ref|XP_004139499.1| (PREDICTED: photosystem I subunit O [Cucumis sativus])

HSP 1 Score: 298.1 bits (762), Expect = 8.3e-78
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 1 

Query: 1   MATAFATSSVAGLGTASLSSPSSRSPRLVSGFIKPPVAARNPLSVAGASGGKFTCFERDW 60
           MATAFATSSVAGLGTASLSSPSSRSPRLVSGFIKPPVAARNPLSVAGASGGKFTCFERDW
Sbjct: 1   MATAFATSSVAGLGTASLSSPSSRSPRLVSGFIKPPVAARNPLSVAGASGGKFTCFERDW 60

Query: 61  LRRDLNVIGFGLIGWIAPSSIPVISGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLIT 120
           LRRDLNVIGFGLIGWIAPSSIPVISGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLIT
Sbjct: 61  LRRDLNVIGFGLIGWIAPSSIPVISGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLIT 120

Query: 121 WHLGLFITLTFGQIGFKGRTEDYFSK 147
           WHLGLFITLTFGQIGFKGRTEDYFSK
Sbjct: 121 WHLGLFITLTFGQIGFKGRTEDYFSK 146

[Close]
BLAST of Csa1G168350 vs. NCBI nr
Match: gi|659127336|ref|XP_008463649.1| (PREDICTED: uncharacterized protein LOC103501744 [Cucumis melo])

HSP 1 Score: 282.3 bits (721), Expect = 4.7e-73
Identity = 138/146 (94.52%), Postives = 141/146 (96.58%), Query Frame = 1 

Query: 1   MATAFATSSVAGLGTASLSSPSSRSPRLVSGFIKPPVAARNPLSVAGASGGKFTCFERDW 60
           MATAFATSSVAGLGTASLSSPSSRSPRLVSGFIK PVAARNPL+V  AS G+FTCFERDW
Sbjct: 1   MATAFATSSVAGLGTASLSSPSSRSPRLVSGFIKSPVAARNPLNVGRASRGRFTCFERDW 60

Query: 61  LRRDLNVIGFGLIGWIAPSSIPVISGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLIT 120
           LRRDLNVIGFGLIGWIAPSSIPVI+GKSLTGLFFESIG ELAHFPSPPALTSQFWLWLIT
Sbjct: 61  LRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGTELAHFPSPPALTSQFWLWLIT 120

Query: 121 WHLGLFITLTFGQIGFKGRTEDYFSK 147
           WHLGLFITLTFGQIGFKGRTEDYFSK
Sbjct: 121 WHLGLFITLTFGQIGFKGRTEDYFSK 146

[Close]
BLAST of Csa1G168350 vs. NCBI nr
Match: gi|802753230|ref|XP_012088445.1| (PREDICTED: photosystem I subunit O [Jatropha curcas])

HSP 1 Score: 240.0 bits (611), Expect = 2.7e-60
Identity = 119/148 (80.41%), Postives = 129/148 (87.16%), Query Frame = 1 

Query: 1   MATAFATSS-VAGLGTASLSSPSSRSPR---LVSGFIKPPVAARNPLSVAGASGGKFTCF 60
           MA AFATSS V GLG++SLSSP S S R   L SGF+K    ARNPL  AG++GGKF CF
Sbjct: 1   MAAAFATSSTVIGLGSSSLSSPRSCSCRRTCLSSGFVKSVATARNPLRQAGSNGGKFMCF 60

Query: 61  ERDWLRRDLNVIGFGLIGWIAPSSIPVISGKSLTGLFFESIGAELAHFPSPPALTSQFWL 120
           ERDWLRRDLNVIGFGLIGW+APSSIP I+GKSLTGLFFESIGAELAHFP+PPALTSQFWL
Sbjct: 61  ERDWLRRDLNVIGFGLIGWLAPSSIPAINGKSLTGLFFESIGAELAHFPTPPALTSQFWL 120

Query: 121 WLITWHLGLFITLTFGQIGFKGRTEDYF 145
           WL+TWHLGLF+ LTFGQIGFKGRTEDYF
Sbjct: 121 WLVTWHLGLFLCLTFGQIGFKGRTEDYF 148

[Close]
BLAST of Csa1G168350 vs. NCBI nr
Match: gi|1021045689|gb|KZN03470.1| (hypothetical protein DCAR_012226 [Daucus carota subsp. sativus])

HSP 1 Score: 237.3 bits (604), Expect = 1.7e-59
Identity = 113/146 (77.40%), Postives = 127/146 (86.99%), Query Frame = 1 

Query: 4   AFATSSVAGLGTASLSSPS-----SRSPRLVSGFIKPPVAARNPLSVAGASGGKFTCFER 63
           A  TS++ GLGT+SLSSPS      ++  L SGF++ PVAARNPL +A ASGGKFTCFE+
Sbjct: 2   AATTSTIVGLGTSSLSSPSHLVSAKQTVSLTSGFLRSPVAARNPLRLAQASGGKFTCFEQ 61

Query: 64  DWLRRDLNVIGFGLIGWIAPSSIPVISGKSLTGLFFESIGAELAHFPSPPALTSQFWLWL 123
           +WLRRDLNVIGFGLIGW+APSSIP+I+G SLTGLFF SIG ELAHFPSPPALTSQFWLWL
Sbjct: 62  NWLRRDLNVIGFGLIGWLAPSSIPIINGDSLTGLFFSSIGTELAHFPSPPALTSQFWLWL 121

Query: 124 ITWHLGLFITLTFGQIGFKGRTEDYF 145
           +TWHLGLFI LTFGQIGFKGRTEDYF
Sbjct: 122 VTWHLGLFICLTFGQIGFKGRTEDYF 147

[Close]
BLAST of Csa1G168350 vs. NCBI nr
Match: gi|703120092|ref|XP_010102022.1| (hypothetical protein L484_016312 [Morus notabilis])

HSP 1 Score: 236.9 bits (603), Expect = 2.3e-59
Identity = 118/145 (81.38%), Postives = 125/145 (86.21%), Query Frame = 1 

Query: 1   MATAFATSS-VAGLGTASLSSPSSRSPRLVSGFIKPPVAARNPLSVAGASGGKFTCFERD 60
           MAT  AT+S VAGLG++SL S    S  L SGF+K  VA RNPL    ASGGKFTCFERD
Sbjct: 1   MATTIATASTVAGLGSSSLCSTKRTS--LSSGFLKSSVAVRNPLKQVSASGGKFTCFERD 60

Query: 61  WLRRDLNVIGFGLIGWIAPSSIPVISGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI 120
           WLRRD NVIGFGLIGW+APSSIPVI+GKSLTGLFFESIGAELAHFP+PPALTSQFWLWLI
Sbjct: 61  WLRRDFNVIGFGLIGWLAPSSIPVINGKSLTGLFFESIGAELAHFPTPPALTSQFWLWLI 120

Query: 121 TWHLGLFITLTFGQIGFKGRTEDYF 145
           TWHLGLFI LTFGQIGFKGRTEDYF
Sbjct: 121 TWHLGLFIVLTFGQIGFKGRTEDYF 143

The following BLAST results are available for this feature:
BLAST of Csa1G168350 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PSAO_ARATH3.6e-5772.41Photosystem I subunit O OS=Arabidopsis thaliana GN=PSAO PE=1 SV=1[more]
BLAST of Csa1G168350 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LT61_CUCSA5.8e-78100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G168350 PE=4 SV=1[more]
A0A067JJG3_JATCU1.9e-6080.41Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26726 PE=4 SV=1[more]
A0A166C9D6_DAUCA1.2e-5977.40Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_012226 PE=4 SV=1[more]
V4RS53_9ROSI1.6e-5979.45Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029515mg PE=4 SV=1[more]
A0A067D630_CITSI1.6e-5979.45Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032153mg PE=4 SV=1[more]
BLAST of Csa1G168350 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G08380.12.0e-5872.41 photosystem I subunit O[more]
BLAST of Csa1G168350 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449443468|ref|XP_004139499.1|8.3e-78100.00PREDICTED: photosystem I subunit O [Cucumis sativus][more]
gi|659127336|ref|XP_008463649.1|4.7e-7394.52PREDICTED: uncharacterized protein LOC103501744 [Cucumis melo][more]
gi|802753230|ref|XP_012088445.1|2.7e-6080.41PREDICTED: photosystem I subunit O [Jatropha curcas][more]
gi|1021045689|gb|KZN03470.1|1.7e-5977.40hypothetical protein DCAR_012226 [Daucus carota subsp. sativus][more]
gi|703120092|ref|XP_010102022.1|2.3e-5981.38hypothetical protein L484_016312 [Morus notabilis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR017498PSI_PsaO
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030003 cellular cation homeostasis
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0070838 divalent metal ion transport
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0009768 photosynthesis, light harvesting in photosystem I
biological_process GO:0009767 photosynthetic electron transport chain
biological_process GO:0010207 photosystem II assembly
biological_process GO:0009657 plastid organization
biological_process GO:0035304 regulation of protein dephosphorylation
biological_process GO:0006364 rRNA processing
biological_process GO:0008150 biological_process
cellular_component GO:0009507 chloroplast
cellular_component GO:0009522 photosystem I
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU088321cucumber EST collection version 3.0transcribed_cluster
CU097549cucumber EST collection version 3.0transcribed_cluster
CU121792cucumber EST collection version 3.0transcribed_cluster
CU125838cucumber EST collection version 3.0transcribed_cluster
CU129305cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G168350.1Csa1G168350.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU097549CU097549transcribed_cluster
CU121792CU121792transcribed_cluster
CU088321CU088321transcribed_cluster
CU125838CU125838transcribed_cluster
CU129305CU129305transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017498Photosystem I PsaOTIGRFAMsTIGR03059TIGR03059coord: 66..144
score: 6.9
NoneNo IPR availablePANTHERPTHR36311FAMILY NOT NAMEDcoord: 2..146
score: 9.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa1G168350MELO3C025587Melon (DHL92) v3.5.1cumeB015
Csa1G168350ClCG01G011760Watermelon (Charleston Gray)cuwcgB022
Csa1G168350MELO3C025587.2Melon (DHL92) v3.6.1cumedB010
Csa1G168350Cla97C01G011340Watermelon (97103) v2cuwmbB009
Csa1G168350CSPI01G14990Wild cucumber (PI 183967)cpicuB000
Csa1G168350Cucsa.319700Cucumber (Gy14) v1cgycuB457
Csa1G168350CmaCh13G003520Cucurbita maxima (Rimu)cmacuB222
Csa1G168350CmoCh13G003810Cucurbita moschata (Rifu)cmocuB206
Csa1G168350Cp4.1LG00g01700Cucurbita pepo (Zucchini)cpecuB003
Csa1G168350CsGy1G014780Cucumber (Gy14) v2cgybcuB001
Csa1G168350Carg26504Silver-seed gourdcarcuB0998
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa1G168350Wax gourdcuwgoB049
Csa1G168350Cucumber (Chinese Long) v2cucuB016
Csa1G168350Cucumber (Gy14) v1cgycuB342
Csa1G168350Cucurbita maxima (Rimu)cmacuB399
Csa1G168350Cucurbita maxima (Rimu)cmacuB579
Csa1G168350Cucurbita moschata (Rifu)cmocuB383
Csa1G168350Cucurbita moschata (Rifu)cmocuB569
Csa1G168350Melon (DHL92) v3.5.1cumeB068
Csa1G168350Watermelon (Charleston Gray)cuwcgB006
Csa1G168350Watermelon (Charleston Gray)cuwcgB028
Csa1G168350Watermelon (97103) v1cuwmB007
Csa1G168350Watermelon (97103) v1cuwmB042
Csa1G168350Watermelon (97103) v1cuwmB065
Csa1G168350Cucurbita pepo (Zucchini)cpecuB020
Csa1G168350Cucurbita pepo (Zucchini)cpecuB848
Csa1G168350Bottle gourd (USVL1VR-Ls)culsiB005
Csa1G168350Bottle gourd (USVL1VR-Ls)culsiB032
Csa1G168350Bottle gourd (USVL1VR-Ls)culsiB021
Csa1G168350Bottle gourd (USVL1VR-Ls)culsiB049
Csa1G168350Melon (DHL92) v3.6.1cumedB061
Csa1G168350Melon (DHL92) v3.6.1cumedB078
Csa1G168350Silver-seed gourdcarcuB0000
Csa1G168350Silver-seed gourdcarcuB0931
Csa1G168350Watermelon (97103) v2cuwmbB018
Csa1G168350Watermelon (97103) v2cuwmbB026