CmaCh13G003520 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.AACAGCGCTTCCCCAAATCTCCTCCCCAACAAAACCCCTCCCTCACTTCTACTGCATACCAATCCCAAACCCTAATCCGCACAATCCCTCCCAAAAATGGCGTCCGCCTTCGCTACCTCCTCCTCCGTCGTCGGCCTCGGAAGCTCCTCCCTCTCCTCTCCTTCCTCCAGATCTCCCCGTCTCGTCTCCGGTAACCGGCTTCCACTTGCAACTATTTTCCCCTTCCTCTGCCTTGTAATTGAATTTGGCGTTTTTTCTCGTCTTCGCAGGGTTCATCAAGCCCCCTGTCGTCGCGAGGAATCCGTTCGGCGTGGCGCGTTCATTCGGCGGAAGGTTCACCTGGTAAGTAAGATTAGAGTGAGAGATAGTATATGAGTTGGTCGGTTTGGGATTCGATTTGGAGAATGACGAGTTTGTTGTACGGTTTCGTGGTTTGAAAGCTTTCAGAGAGATTGGCTGAGGAGAGATCTGAATGTGATCGGATTTGGACTCATCGGGTGGATTGCGCCGTCGAGTATCCCGGTGATCGACGGGAAGAGCTTGACGGGGCTCTTCTTTGAGAGCATTGGAGCAGAGCTTGCGCATTTTCCGTCTCCACCGGCGCTCACTTCTCAGTTCTGGTAA AACAGCGCTTCCCCAAATCTCCTCCCCAACAAAACCCCTCCCTCACTTCTACTGCATACCAATCCCAAACCCTAATCCGCACAATCCCTCCCAAAAATGGCGTCCGCCTTCGCTACCTCCTCCTCCGTCGTCGGCCTCGGAAGCTCCTCCCTCTCCTCTCCTTCCTCCAGATCTCCCCGTCTCGTCTCCGGGTTCATCAAGCCCCCTGTCGTCGCGAGGAATCCGTTCGGCGTGGCGCGTTCATTCGGCGGAAGGTTCACCTGCTTTCAGAGAGATTGGCTGAGGAGAGATCTGAATGTGATCGGATTTGGACTCATCGGGTGGATTGCGCCGTCGAGTATCCCGGTGATCGACGGGAAGAGCTTGACGGGGCTCTTCTTTGAGAGCATTGGAGCAGAGCTTGCGCATTTTCCGTCTCCACCGGCGCTCACTTCTCAGTTCTGGTAA ATGGCGTCCGCCTTCGCTACCTCCTCCTCCGTCGTCGGCCTCGGAAGCTCCTCCCTCTCCTCTCCTTCCTCCAGATCTCCCCGTCTCGTCTCCGGGTTCATCAAGCCCCCTGTCGTCGCGAGGAATCCGTTCGGCGTGGCGCGTTCATTCGGCGGAAGGTTCACCTGCTTTCAGAGAGATTGGCTGAGGAGAGATCTGAATGTGATCGGATTTGGACTCATCGGGTGGATTGCGCCGTCGAGTATCCCGGTGATCGACGGGAAGAGCTTGACGGGGCTCTTCTTTGAGAGCATTGGAGCAGAGCTTGCGCATTTTCCGTCTCCACCGGCGCTCACTTCTCAGTTCTGGTAA MASAFATSSSVVGLGSSSLSSPSSRSPRLVSGFIKPPVVARNPFGVARSFGGRFTCFQRDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGAELAHFPSPPALTSQFW
BLAST of CmaCh13G003520 vs. Swiss-Prot
Match: PSAO_ARATH (Photosystem I subunit O OS=Arabidopsis thaliana GN=PSAO PE=1 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 2.3e-38 Identity = 76/116 (65.52%), Postives = 94/116 (81.03%), Query Frame = 1
BLAST of CmaCh13G003520 vs. TrEMBL
Match: A0A0A0LT61_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G168350 PE=4 SV=1) HSP 1 Score: 202.6 bits (514), Expect = 2.6e-49 Identity = 101/116 (87.07%), Postives = 108/116 (93.10%), Query Frame = 1
BLAST of CmaCh13G003520 vs. TrEMBL
Match: A0A067JJG3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26726 PE=4 SV=1) HSP 1 Score: 179.9 bits (455), Expect = 1.8e-42 Identity = 92/119 (77.31%), Postives = 101/119 (84.87%), Query Frame = 1
BLAST of CmaCh13G003520 vs. TrEMBL
Match: B9MYU1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s20960g PE=4 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 1.7e-40 Identity = 87/120 (72.50%), Postives = 99/120 (82.50%), Query Frame = 1
BLAST of CmaCh13G003520 vs. TrEMBL
Match: U5GGE9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s20960g PE=4 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 1.7e-40 Identity = 87/120 (72.50%), Postives = 99/120 (82.50%), Query Frame = 1
BLAST of CmaCh13G003520 vs. TrEMBL
Match: B9HQ34_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s16240g PE=4 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 3.8e-40 Identity = 86/120 (71.67%), Postives = 101/120 (84.17%), Query Frame = 1
BLAST of CmaCh13G003520 vs. TAIR10
Match: AT1G08380.1 (AT1G08380.1 photosystem I subunit O) HSP 1 Score: 159.5 bits (402), Expect = 1.3e-39 Identity = 76/116 (65.52%), Postives = 94/116 (81.03%), Query Frame = 1
BLAST of CmaCh13G003520 vs. NCBI nr
Match: gi|449443468|ref|XP_004139499.1| (PREDICTED: photosystem I subunit O [Cucumis sativus]) HSP 1 Score: 202.6 bits (514), Expect = 3.7e-49 Identity = 101/116 (87.07%), Postives = 108/116 (93.10%), Query Frame = 1
BLAST of CmaCh13G003520 vs. NCBI nr
Match: gi|659127336|ref|XP_008463649.1| (PREDICTED: uncharacterized protein LOC103501744 [Cucumis melo]) HSP 1 Score: 197.6 bits (501), Expect = 1.2e-47 Identity = 99/116 (85.34%), Postives = 106/116 (91.38%), Query Frame = 1
BLAST of CmaCh13G003520 vs. NCBI nr
Match: gi|802753230|ref|XP_012088445.1| (PREDICTED: photosystem I subunit O [Jatropha curcas]) HSP 1 Score: 179.9 bits (455), Expect = 2.6e-42 Identity = 92/119 (77.31%), Postives = 101/119 (84.87%), Query Frame = 1
BLAST of CmaCh13G003520 vs. NCBI nr
Match: gi|743796878|ref|XP_011006585.1| (PREDICTED: photosystem I subunit O-like [Populus euphratica]) HSP 1 Score: 174.1 bits (440), Expect = 1.4e-40 Identity = 88/120 (73.33%), Postives = 99/120 (82.50%), Query Frame = 1
BLAST of CmaCh13G003520 vs. NCBI nr
Match: gi|566167691|ref|XP_006384772.1| (hypothetical protein POPTR_0004s20960g [Populus trichocarpa]) HSP 1 Score: 173.3 bits (438), Expect = 2.4e-40 Identity = 87/120 (72.50%), Postives = 99/120 (82.50%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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