MU61199 (transcribed_cluster) Melon (DHL92) v3.5.1

NameMU61199
Typetranscribed_cluster
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionPhotosystem I subunit O
Locationchr12 : 14051029 .. 14051409 (-)
Sequence length251
The following sequences are available for this feature:

transcribed_cluster sequence

GCACTAATCCCGATCCCCACAAAATGGCCACCGCCTTCGCTACCTCCTCTGTCGCCGGCCTCGGAACCGCCTCCCTCTCCTCTCCTTCCTCCAGATCTCCCCGTCTAGTCTCCGGGTTCATCAAGTCGCCCGTGGCCGCCAGGAATCCGCTTAACGTAGGGCGTGCATCCCGTGGAAGGTTCACCTGGTTTGAGAGGGATTGGTGATCGAAATAGCAGAATGATTGGGTGTTTGGAGTGATCTGGGGGATT
Library categoryESTs
melon VFLP2 library1
BLAST of MU61199 vs. TrEMBL
Match: A0A0A0LT61_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G168350 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 1.8e-12
Identity = 45/73 (61.64%), Postives = 49/73 (67.12%), Query Frame = 3

Query: 24  MATAFATSSVAGLGTAXXXXXXXXXXXXVSGFIKSPVAARNPLNVGRASRGRFTWFERDW 83
           MATAFATSSVAGLGTA            VSGFIK PVAARNPL+V  AS G+FT FERDW
Sbjct: 1   MATAFATSSVAGLGTASLSSPSSRSPRLVSGFIKPPVAARNPLSVAGASGGKFTCFERDW 60

Query: 84  *SK*QNDWVFGVI 143
             +  N   FG+I
Sbjct: 61  LRRDLNVIGFGLI 73

Query: 144 203
           
Sbjct: 121 73

Query: 204 243
           
Sbjct: 181 73

BLAST of MU61199 vs. TrEMBL
Match: A0A059DA19_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03824 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 9.7e-06
Identity = 31/60 (51.67%), Postives = 38/60 (63.33%), Query Frame = 3

Query: 24  MATAFATSSVAGLGTAXXXXXXXXXXXXVSGFIKSPVAARNPLNVGRASRGRFTWFERDW 83
           MA + ATSSV GLG++            VS F++SPV ARNP+   RAS GRFT F+RDW
Sbjct: 1   MAASMATSSVIGLGSSALTSPKKASL--VSDFVRSPVRARNPMKPVRASGGRFTCFQRDW 58

Query: 84  143
           
Sbjct: 61  58

Query: 144 203
           
Sbjct: 121 58

BLAST of MU61199 vs. TrEMBL
Match: A0A059D9C9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03824 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 9.7e-06
Identity = 31/60 (51.67%), Postives = 38/60 (63.33%), Query Frame = 3

Query: 24  MATAFATSSVAGLGTAXXXXXXXXXXXXVSGFIKSPVAARNPLNVGRASRGRFTWFERDW 83
           MA + ATSSV GLG++            VS F++SPV ARNP+   RAS GRFT F+RDW
Sbjct: 1   MAASMATSSVIGLGSSALTSPKKASL--VSDFVRSPVRARNPMKPVRASGGRFTCFQRDW 58

Query: 84  143
           
Sbjct: 61  58

Query: 144 203
           
Sbjct: 121 58

BLAST of MU61199 vs. NCBI nr
Match: gi|659127336|ref|XP_008463649.1| (PREDICTED: uncharacterized protein LOC103501744 [Cucumis melo])

HSP 1 Score: 94.7 bits (234), Expect = 7.9e-17
Identity = 51/73 (69.86%), Postives = 53/73 (72.60%), Query Frame = 3

Query: 24  MATAFATSSVAGLGTAXXXXXXXXXXXXVSGFIKSPVAARNPLNVGRASRGRFTWFERDW 83
           MATAFATSSVAGLGTA            VSGFIKSPVAARNPLNVGRASRGRFT FERDW
Sbjct: 1   MATAFATSSVAGLGTASLSSPSSRSPRLVSGFIKSPVAARNPLNVGRASRGRFTCFERDW 60

Query: 84  *SK*QNDWVFGVI 143
             +  N   FG+I
Sbjct: 61  LRRDLNVIGFGLI 73

Query: 144 203
           
Sbjct: 121 73

Query: 204 243
           
Sbjct: 181 73

BLAST of MU61199 vs. NCBI nr
Match: gi|449443468|ref|XP_004139499.1| (PREDICTED: photosystem I subunit O [Cucumis sativus])

HSP 1 Score: 82.0 bits (201), Expect = 5.3e-13
Identity = 45/73 (61.64%), Postives = 49/73 (67.12%), Query Frame = 3

Query: 24  MATAFATSSVAGLGTAXXXXXXXXXXXXVSGFIKSPVAARNPLNVGRASRGRFTWFERDW 83
           MATAFATSSVAGLGTA            VSGFIK PVAARNPL+V  AS G+FT FERDW
Sbjct: 1   MATAFATSSVAGLGTASLSSPSSRSPRLVSGFIKPPVAARNPLSVAGASGGKFTCFERDW 60

Query: 84  *SK*QNDWVFGVI 143
             +  N   FG+I
Sbjct: 61  LRRDLNVIGFGLI 73

Query: 144 203
           
Sbjct: 121 73

Query: 204 243
           
Sbjct: 181 73

BLAST of MU61199 vs. NCBI nr
Match: gi|747083156|ref|XP_011088934.1| (PREDICTED: photosystem I subunit O [Sesamum indicum])

HSP 1 Score: 66.6 bits (161), Expect = 2.3e-08
Identity = 35/72 (48.61%), Postives = 42/72 (58.33%), Query Frame = 3

Query: 27  ATAFATSSVAGLGTAXXXXXXXXXXXXVSGFIKSPVAARNPLNVGRASRGRFTWFERDW* 86
           A A AT+ V GLGT+             SGF+KSPV  RNPL V +AS G+FT FERDW 
Sbjct: 5   AAAMATTHVVGLGTSTFSNSPNKPLNLSSGFLKSPVTTRNPLRVAQASGGKFTCFERDWL 64

Query: 87  SK*QNDWVFGVI 146
            +  N   FG+I
Sbjct: 65  RRDLNVIGFGLI 76

Query: 147 206
           
Sbjct: 125 76

Query: 207 243
           
Sbjct: 185 76

BLAST of MU61199 vs. NCBI nr
Match: gi|902196626|gb|KNA13155.1| (hypothetical protein SOVF_119330 [Spinacia oleracea])

HSP 1 Score: 58.5 bits (140), Expect = 6.3e-06
Identity = 34/68 (50.00%), Postives = 40/68 (58.82%), Query Frame = 3

Query: 42  TSSVAGLGTAXXXXXXXXXXXXVSGFIKSPVAARNPLNVGRASR-GRFTWFERDW*SK*Q 101
           TS+V GLGT              SGF+KS VAARNPL++  AS  GRFT FER+W  K  
Sbjct: 10  TSTVVGLGTTTLSRSSARSTAFTSGFLKSKVAARNPLSLACASSGGRFTCFERNWLRKDL 69

Query: 102 NDWVFGVI 161
           N   FG+I
Sbjct: 70  NVIGFGLI 77

Query: 162 221
           
Sbjct: 130 77

Query: 222 243
           
Sbjct: 190 77

BLAST of MU61199 vs. NCBI nr
Match: gi|697110292|ref|XP_009609016.1| (PREDICTED: photosystem I subunit O-like [Nicotiana tomentosiformis])

HSP 1 Score: 58.5 bits (140), Expect = 6.3e-06
Identity = 33/73 (45.21%), Postives = 40/73 (54.79%), Query Frame = 3

Query: 24  MATAFATSSVAGLGTAXXXXXXXXXXXXVSGFIKSPVAARNPLNVGRASRGRFTWFERDW 83
           MA   +T+S   LG               SGF+KSPV ARNPL V +AS G+FT FERDW
Sbjct: 1   MAATMSTASTV-LGLVSSSLSSPKKVCLSSGFLKSPVTARNPLRVAQASGGKFTCFERDW 60

Query: 84  *SK*QNDWVFGVI 143
             +  N   FG+I
Sbjct: 61  LRRDLNVIGFGLI 72

Query: 144 203
           
Sbjct: 121 72

Query: 204 243
           
Sbjct: 181 72

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LT61_CUCSA1.8e-1261.64Uncharacterized protein OS=Cucumis sativus GN=Csa_1G168350 PE=4 SV=1[more]
A0A059DA19_EUCGR9.7e-0651.67Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03824 PE=4 SV=1[more]
A0A059D9C9_EUCGR9.7e-0651.67Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03824 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|659127336|ref|XP_008463649.1|7.9e-1769.86PREDICTED: uncharacterized protein LOC103501744 [Cucumis melo][more]
gi|449443468|ref|XP_004139499.1|5.3e-1361.64PREDICTED: photosystem I subunit O [Cucumis sativus][more]
gi|747083156|ref|XP_011088934.1|2.3e-0848.61PREDICTED: photosystem I subunit O [Sesamum indicum][more]
gi|902196626|gb|KNA13155.1|6.3e-0650.00hypothetical protein SOVF_119330 [Spinacia oleracea][more]
gi|697110292|ref|XP_009609016.1|6.3e-0645.21PREDICTED: photosystem I subunit O-like [Nicotiana tomentosiformis][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
MELO3C025587MELO3C025587gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
GA9YP20FM1GA9YP20FM1EST