MELO3C025069.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C025069.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Oxygen-evolving enhancer protein 3-2, chloroplastic
Location	chr09 : 15173716 .. 15174774 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAGGGGCCTGTTTTTGGTATTTGTCAATCTATTTTTAAAAAGCCTCCCTTGCTTACGTGGCATAGTTCTATCATCTCACATCTCCATACATAGTCACAGAGTTTGCATAAAGCTTCGCTCTCAGTACTCCAATGGCGAAATTAATCCCAATCTCACTCTCAAACCTCACTAATCGCATCCATTTCTCTTCCTCTCCCCTTACAATCTCCTTCCAATCCTTCAATACCACACCCAATTGTTCTAAAAACGCCAAAAACATAAGCAGAAGGCTAGGGTTAGGATTCATAGCTTTAATGGCGTCGTCAGTAACTGCGATACCGGCAGAAGTGGCGAATGCTTTAAATCTGAAATTGATCGCGCCGGAGCAGAGCTTAGACGAAGCTGAGCGCGGAATCAGAGGCCACGCGGAAGCGCTTTTGCAGGTGAGAAGCTTAATGGAATCGGAAGCTTGGAAGGAAGCTCAGAAGCGGTTGAGAAGCACTTCGGCGCTGCTTAAACAAGATCTGTACACTATAATTGAATACAAACCGCCGGCGGAGAGGCCTGCTCTTAGGAAACTCTATTCTCTTCTCTTCAACAACGTTACGCGAGTAAGTGTGATTATAATTAAGGCTTCTCATCTTGAAGAATTTTGTGGTGTGTGTTATTCGATTTCATATGGATAATTCTCCTGTTTCTAGATGGATTATGCGGCGAGAGATAAAGATGCAGGAGGAGTTAGGGAGTGCTATAAGAAGATGGAGATGGCCATCTCTGATATTTTGTCAAGAATTTAAAAAGATAAGTGAAGGTTTTTGATTCTGATCGATCAATTAATTCGATGCAATGAAATCGAAAATTTAGTTTGGTGTTCTTCAAATCGGAGGATTCTAGTTCTTGATCAGTAATTGTCATAAATTTTGTTAGTTGAGTTCCAATATTTTAAATGTGTGTGGCTGAATTTTAGGTTTCCAAAATTATAGATAGTTATAGATTTTCAATGGTAGATATTTGTTAGTATTTTGACTATTGTGTTTGTTCAATAGAATTTTTATTCGTTGAATTCACATACAACA

mRNA sequence

AAAAAAGGGGCCTGTTTTTGGTATTTGTCAATCTATTTTTAAAAAGCCTCCCTTGCTTACGTGGCATAGTTCTATCATCTCACATCTCCATACATAGTCACAGAGTTTGCATAAAGCTTCGCTCTCAGTACTCCAATGGCGAAATTAATCCCAATCTCACTCTCAAACCTCACTAATCGCATCCATTTCTCTTCCTCTCCCCTTACAATCTCCTTCCAATCCTTCAATACCACACCCAATTGTTCTAAAAACGCCAAAAACATAAGCAGAAGGCTAGGGTTAGGATTCATAGCTTTAATGGCGTCGTCAGTAACTGCGATACCGGCAGAAGTGGCGAATGCTTTAAATCTGAAATTGATCGCGCCGGAGCAGAGCTTAGACGAAGCTGAGCGCGGAATCAGAGGCCACGCGGAAGCGCTTTTGCAGGTGAGAAGCTTAATGGAATCGGAAGCTTGGAAGGAAGCTCAGAAGCGGTTGAGAAGCACTTCGGCGCTGCTTAAACAAGATCTGTACACTATAATTGAATACAAACCGCCGGCGGAGAGGCCTGCTCTTAGGAAACTCTATTCTCTTCTCTTCAACAACGTTACGCGAATGGATTATGCGGCGAGAGATAAAGATGCAGGAGGAGTTAGGGAGTGCTATAAGAAGATGGAGATGGCCATCTCTGATATTTTGTCAAGAATTTAAAAAGATAAGTGAAGGTTTTTGATTCTGATCGATCAATTAATTCGATGCAATGAAATCGAAAATTTAGTTTGGTGTTCTTCAAATCGGAGGATTCTAGTTCTTGATCAGTAATTGTCATAAATTTTGTTAGTTGAGTTCCAATATTTTAAATGTGTGTGGCTGAATTTTAGGTTTCCAAAATTATAGATAGTTATAGATTTTCAATGGTAGATATTTGTTAGTATTTTGACTATTGTGTTTGTTCAATAGAATTTTTATTCGTTGAATTCACATACAACA

Coding sequence (CDS)

ATGGCGAAATTAATCCCAATCTCACTCTCAAACCTCACTAATCGCATCCATTTCTCTTCCTCTCCCCTTACAATCTCCTTCCAATCCTTCAATACCACACCCAATTGTTCTAAAAACGCCAAAAACATAAGCAGAAGGCTAGGGTTAGGATTCATAGCTTTAATGGCGTCGTCAGTAACTGCGATACCGGCAGAAGTGGCGAATGCTTTAAATCTGAAATTGATCGCGCCGGAGCAGAGCTTAGACGAAGCTGAGCGCGGAATCAGAGGCCACGCGGAAGCGCTTTTGCAGGTGAGAAGCTTAATGGAATCGGAAGCTTGGAAGGAAGCTCAGAAGCGGTTGAGAAGCACTTCGGCGCTGCTTAAACAAGATCTGTACACTATAATTGAATACAAACCGCCGGCGGAGAGGCCTGCTCTTAGGAAACTCTATTCTCTTCTCTTCAACAACGTTACGCGAATGGATTATGCGGCGAGAGATAAAGATGCAGGAGGAGTTAGGGAGTGCTATAAGAAGATGGAGATGGCCATCTCTGATATTTTGTCAAGAATTTAA

Protein sequence

MAKLIPISLSNLTNRIHFSSSPLTISFQSFNTTPNCSKNAKNISRRLGLGFIALMASSVTAIPAEVANALNLKLIAPEQSLDEAERGIRGHAEALLQVRSLMESEAWKEAQKRLRSTSALLKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKDAGGVRECYKKMEMAISDILSRI

Homology

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BLAST of MELO3C025069.2 vs. NCBI nr
Match: XP_008463126.1 (PREDICTED: psbQ-like protein 3, chloroplastic [Cucumis melo])

HSP 1 Score: 349.7 bits (896), Expect = 5.9e-93
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 1   MAKLIPISLSNLTNRIHFSSSPLTISFQSFNTTPNCSKNAKNISRRLGLGFIALMASSVT 60
           MAKLIPISLSNLTNRIHFSSSPLTISFQSFNTTPNCSKNAKNISRRLGLGFIALMASSVT
Sbjct: 1   MAKLIPISLSNLTNRIHFSSSPLTISFQSFNTTPNCSKNAKNISRRLGLGFIALMASSVT 60

Query: 61  AIPAEVANALNLKLIAPEQSLDEAERGIRGHAEALLQVRSLMESEAWKEAQKRLRSTSAL 120
           AIPAEVANALNLKLIAPEQSLDEAERGIRGHAEALLQVRSLMESEAWKEAQKRLRSTSAL
Sbjct: 61  AIPAEVANALNLKLIAPEQSLDEAERGIRGHAEALLQVRSLMESEAWKEAQKRLRSTSAL 120

Query: 121 LKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKDAGGVRECYKKMEMAISDI 180
           LKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKDAGGVRECYKKMEMAISDI
Sbjct: 121 LKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKDAGGVRECYKKMEMAISDI 180

Query: 181 LSRI 185
           LSRI
Sbjct: 181 LSRI 184

[Close]

BLAST of MELO3C025069.2 vs. NCBI nr
Match: XP_004148913.1 (PREDICTED: psbQ-like protein 3, chloroplastic [Cucumis sativus] >KGN50891.1 hypothetical protein Csa_5G315360 [Cucumis sativus])

HSP 1 Score: 323.6 bits (828), Expect = 4.5e-85
Identity = 173/184 (94.02%), Postives = 175/184 (95.11%), Query Frame = 0


Query: 1   MAKLIPISLSNLTNRIHFSSSPLTISFQSFNTTPNCSKNAKNISRRLGLGFIALMASSVT 60
           MAKLIPISLSNLTNRIHFS SPLTISF SFNTTPNCS NA NISRRLGLGFIALMASSVT
Sbjct: 1   MAKLIPISLSNLTNRIHFSYSPLTISFPSFNTTPNCSNNATNISRRLGLGFIALMASSVT 60

Query: 61  AIPAEVANALNLKLIAPEQSLDEAERGIRGHAEALLQVRSLMESEAWKEAQKRLRSTSAL 120
           AIPAEVANAL+LKLIAPEQSLDEAE GIR HAEALLQVRSL+ESEAWKEAQKRLRSTSAL
Sbjct: 61  AIPAEVANALDLKLIAPEQSLDEAESGIRRHAEALLQVRSLIESEAWKEAQKRLRSTSAL 120

Query: 121 LKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKDAGGVRECYKKMEMAISDI 180
           LKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKD GGV E YKKMEMAISDI
Sbjct: 121 LKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKDVGGVWESYKKMEMAISDI 180

Query: 181 LSRI 185
           LSRI
Sbjct: 181 LSRI 184

[Close]

BLAST of MELO3C025069.2 vs. NCBI nr
Match: XP_022991100.1 (psbQ-like protein 3, chloroplastic isoform X1 [Cucurbita maxima])

HSP 1 Score: 258.8 bits (660), Expect = 1.4e-65
Identity = 139/185 (75.14%), Postives = 158/185 (85.41%), Query Frame = 0


Query: 1   MAKLIPISLSNLTNRIHFSSSPLTISFQSFNTTPNCSKNAKNISRRLGLGFIALMA-SSV 60
           MA+L PIS+SNL+NRIHFSSSP  ISFQ F+ T     N ++ISRRLGLGF+ALMA SSV
Sbjct: 1   MAELSPISVSNLSNRIHFSSSPPIISFQLFSITAKRCSNCRSISRRLGLGFMALMASSSV 60

Query: 61  TAIPAEVANALNLKLIAPEQSLDEAERGIRGHAEALLQVRSLMESEAWKEAQKRLRSTSA 120
            + P ++ NAL+LKLIAPEQS +EAE GIRGHAEA+LQVR L+ESE+WKEAQK+LRS+S 
Sbjct: 61  ASTPVKITNALDLKLIAPEQSFEEAESGIRGHAEAVLQVRGLIESESWKEAQKQLRSSSP 120

Query: 121 LLKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKDAGGVRECYKKMEMAISD 180
           LLKQDLYTIIEYKPPAERP LRKLYSLLFNNVTRMDYAARDKDA  V +CY  + MAISD
Sbjct: 121 LLKQDLYTIIEYKPPAERPPLRKLYSLLFNNVTRMDYAARDKDAERVWQCYDNIVMAISD 180

Query: 181 ILSRI 185
           ILSRI
Sbjct: 181 ILSRI 185

[Close]

BLAST of MELO3C025069.2 vs. NCBI nr
Match: XP_022962345.1 (psbQ-like protein 3, chloroplastic isoform X1 [Cucurbita moschata])

HSP 1 Score: 250.4 bits (638), Expect = 4.8e-63
Identity = 138/186 (74.19%), Postives = 156/186 (83.87%), Query Frame = 0


Query: 1   MAKLIPISLSNLTNRIHF-SSSPLTISFQSFNTTPNCSKNAKNISRRLGLGFIALMA-SS 60
           MA+L PIS+SNL+NRIHF SSSP   S Q F+ T     N ++ISRRLGLG IALMA SS
Sbjct: 1   MAELSPISVSNLSNRIHFSSSSPPINSSQLFSITAKRCSNCRSISRRLGLGLIALMASSS 60

Query: 61  VTAIPAEVANALNLKLIAPEQSLDEAERGIRGHAEALLQVRSLMESEAWKEAQKRLRSTS 120
           V + P  +ANAL+LKLIAPEQS +EAE GIRGHAEA+LQVR L+ESE+WKEAQK+LR++S
Sbjct: 61  VASTPVRIANALDLKLIAPEQSFEEAESGIRGHAEAVLQVRGLIESESWKEAQKQLRTSS 120

Query: 121 ALLKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKDAGGVRECYKKMEMAIS 180
            LLKQDLYTIIEYKPPAERP LRKLYSLLFNNVTRMDYAARDKDA  VR+CY  + MAIS
Sbjct: 121 PLLKQDLYTIIEYKPPAERPPLRKLYSLLFNNVTRMDYAARDKDAERVRQCYDNIVMAIS 180

Query: 181 DILSRI 185
           DILSRI
Sbjct: 181 DILSRI 186

[Close]

BLAST of MELO3C025069.2 vs. NCBI nr
Match: XP_023551782.1 (psbQ-like protein 3, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 248.8 bits (634), Expect = 1.4e-62
Identity = 139/190 (73.16%), Postives = 159/190 (83.68%), Query Frame = 0


Query: 1   MAKLIPISLSNLTNRIHF-SSSPLTISFQSFNTT----PNCSKNAKNISRRLGLGFIALM 60
           MA+L PIS+SNL+NRIHF SSSP  IS Q F+ T     NC   +++ISRRLGLG IALM
Sbjct: 1   MAELSPISVSNLSNRIHFSSSSPPIISVQLFSITAKRCSNCRSISRSISRRLGLGLIALM 60

Query: 61  A-SSVTAIPAEVANALNLKLIAPEQSLDEAERGIRGHAEALLQVRSLMESEAWKEAQKRL 120
           A SSV + P ++ANAL+LKLIAPEQS +EAE GIRGHAEA+LQVR L+ESE+WKEAQK+L
Sbjct: 61  ASSSVASTPVKIANALDLKLIAPEQSFEEAESGIRGHAEAVLQVRGLIESESWKEAQKQL 120

Query: 121 RSTSALLKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKDAGGVRECYKKME 180
           RS+S LLKQDLYTIIEYKPPAERP LR+LYSLLFNNVTRMDYAARDKDA  V +CY  + 
Sbjct: 121 RSSSPLLKQDLYTIIEYKPPAERPPLRRLYSLLFNNVTRMDYAARDKDAERVWQCYDNIV 180

Query: 181 MAISDILSRI 185
           MAISDILSRI
Sbjct: 181 MAISDILSRI 190

[Close]

BLAST of MELO3C025069.2 vs. TAIR10
Match: AT2G01918.1 (PsbQ-like 3)

HSP 1 Score: 99.0 bits (245), Expect = 3.3e-21
Identity = 49/109 (44.95%), Postives = 73/109 (66.97%), Query Frame = 0


Query: 77  PEQSLDEAERGIRGHAEALLQVRSLM-ESEAWKEAQKRLRSTSALLKQDLYTIIEYKPPA 136
           PE++++ A+ G+R +AE + +++ +M E + WKE  K LR +++ +KQD Y II+ KPP 
Sbjct: 79  PERTVELAQEGLRKNAENIKRIKEIMIEKKLWKEGGKELRRSASNMKQDFYLIIQAKPPK 138

Query: 137 ERPALRKLYSLLFNNVTRMDYAARDKDAGGVRECYKKMEMAISDILSRI 185
           +RP  R LYS LFN++T+MDYAARD D   V E Y  +   + DI  RI
Sbjct: 139 DRPLFRSLYSSLFNSITKMDYAARDGDETKVLEYYINIVAILDDIFPRI 187

[Close]

BLAST of MELO3C025069.2 vs. TAIR10
Match: AT4G21280.2 (photosystem II subunit QA)

HSP 1 Score: 64.3 bits (155), Expect = 8.9e-11
Identity = 44/179 (24.58%), Postives = 89/179 (49.72%), Query Frame = 0


Query: 37  SKNAKNISRRLGLGFIALMASSVTAIPAEVANALNLKLIAP--------------EQSLD 96
           ++ ++  SRR  +G +A   +  + + A +A+A+++K+  P              +Q+ D
Sbjct: 45  AQQSEETSRRSVIGLVAAGLAGGSFVQAVLADAISIKVGPPPAPSGGLPAGTDNSDQARD 104

Query: 97  -----------------EAERGIRGHAEALLQVRSLMESEAWKEAQKRLRSTSALLKQDL 156
                            EA    +  A+ ++ V+ L++ +AW   Q  LRS ++ L+ DL
Sbjct: 105 FALALKDRFYLQPLPPTEAAARAKESAKDIINVKPLIDRKAWPYVQNDLRSKASYLRYDL 164

Query: 157 YTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKDAGGVRECYKKMEMAISDILSRI 185
            TII  KP  E+ +L+ L + LF+ +  +DYAA+ K      + Y +   A++++L+++
Sbjct: 165 NTIISSKPKDEKKSLKDLTTKLFDTIDNLDYAAKKKSPSQAEKYYAETVSALNEVLAKL 223

[Close]

BLAST of MELO3C025069.2 vs. TAIR10
Match: AT3G01440.1 (PsbQ-like 1)

HSP 1 Score: 42.0 bits (97), Expect = 4.7e-04
Identity = 23/97 (23.71%), Postives = 47/97 (48.45%), Query Frame = 0


Query: 88  IRGHAEALLQVRSLMESEAWKEAQKRLRSTSALLKQDLYTIIEYKPPAERPALRKLYSLL 147
           ++ +A  LL +  L+  +     +K LR  S  L  D   +I      ++  L  L + L
Sbjct: 123 VKKNAFDLLAMEDLIGPDTLNYVKKYLRLKSTFLFYDFDNLISAAASEDKQPLTDLANRL 182

Query: 148 FNNVTRMDYAARDKDAGGVRECYKKMEMAISDILSRI 185
           F+N  +++ AA+ K+      CYK  +  + ++++R+
Sbjct: 183 FDNFEKLEDAAKTKNLAETESCYKDTKFLLQEVMTRM 219

[Close]

BLAST of MELO3C025069.2 vs. Swiss-Prot
Match: sp|Q2V4B2|PQL3_ARATH (PsbQ-like protein 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PQL3 PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 5.9e-20
Identity = 49/109 (44.95%), Postives = 73/109 (66.97%), Query Frame = 0


Query: 77  PEQSLDEAERGIRGHAEALLQVRSLM-ESEAWKEAQKRLRSTSALLKQDLYTIIEYKPPA 136
           PE++++ A+ G+R +AE + +++ +M E + WKE  K LR +++ +KQD Y II+ KPP 
Sbjct: 79  PERTVELAQEGLRKNAENIKRIKEIMIEKKLWKEGGKELRRSASNMKQDFYLIIQAKPPK 138

Query: 137 ERPALRKLYSLLFNNVTRMDYAARDKDAGGVRECYKKMEMAISDILSRI 185
           +RP  R LYS LFN++T+MDYAARD D   V E Y  +   + DI  RI
Sbjct: 139 DRPLFRSLYSSLFNSITKMDYAARDGDETKVLEYYINIVAILDDIFPRI 187

[Close]

BLAST of MELO3C025069.2 vs. Swiss-Prot
Match: sp|Q9XFT3|PSBQ1_ARATH (Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSBQ1 PE=1 SV=3)

HSP 1 Score: 64.3 bits (155), Expect = 1.6e-09
Identity = 44/179 (24.58%), Postives = 89/179 (49.72%), Query Frame = 0


Query: 37  SKNAKNISRRLGLGFIALMASSVTAIPAEVANALNLKLIAP--------------EQSLD 96
           ++ ++  SRR  +G +A   +  + + A +A+A+++K+  P              +Q+ D
Sbjct: 45  AQQSEETSRRSVIGLVAAGLAGGSFVQAVLADAISIKVGPPPAPSGGLPAGTDNSDQARD 104

Query: 97  -----------------EAERGIRGHAEALLQVRSLMESEAWKEAQKRLRSTSALLKQDL 156
                            EA    +  A+ ++ V+ L++ +AW   Q  LRS ++ L+ DL
Sbjct: 105 FALALKDRFYLQPLPPTEAAARAKESAKDIINVKPLIDRKAWPYVQNDLRSKASYLRYDL 164

Query: 157 YTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKDAGGVRECYKKMEMAISDILSRI 185
            TII  KP  E+ +L+ L + LF+ +  +DYAA+ K      + Y +   A++++L+++
Sbjct: 165 NTIISSKPKDEKKSLKDLTTKLFDTIDNLDYAAKKKSPSQAEKYYAETVSALNEVLAKL 223

[Close]

BLAST of MELO3C025069.2 vs. Swiss-Prot
Match: sp|Q41048|PSBQ1_MAIZE (Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Zea mays OX=4577 GN=PSBQ1 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 6.8e-08
Identity = 28/102 (27.45%), Postives = 59/102 (57.84%), Query Frame = 0


Query: 83  EAERGIRGHAEALLQVRSLMESEAWKEAQKRLRSTSALLKQDLYTIIEYKPPAERPALRK 142
           EA   ++  A+ ++ ++ L++ +AW   Q  LR  ++ L+ DL T+I  KP  E+ +L++
Sbjct: 115 EAAARVKTSAQDIINLKPLIDKKAWPYVQNDLRLRASYLRYDLKTVIASKPKEEKKSLKE 174

Query: 143 LYSLLFNNVTRMDYAARDKDAGGVRECYKKMEMAISDILSRI 185
           L   LF+ +  +D+AA+ K      + +   + A+ D+L+++
Sbjct: 175 LTGKLFSTIDDLDHAAKIKSTPEAEKYFAATKDALGDVLAKL 216

[Close]

BLAST of MELO3C025069.2 vs. Swiss-Prot
Match: sp|Q41806|PSBQ2_MAIZE (Oxygen-evolving enhancer protein 3-2, chloroplastic OS=Zea mays OX=4577 GN=PSBQ2 PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 8.8e-08
Identity = 28/102 (27.45%), Postives = 59/102 (57.84%), Query Frame = 0


Query: 83  EAERGIRGHAEALLQVRSLMESEAWKEAQKRLRSTSALLKQDLYTIIEYKPPAERPALRK 142
           EA   ++  A+ ++ ++ L++ +AW   Q  LR  ++ L+ DL T+I  KP  E+ +L++
Sbjct: 111 EAVARVKTSAQDIINLKPLIDKKAWPYVQNDLRLRASYLRYDLKTVIASKPKEEKKSLKE 170

Query: 143 LYSLLFNNVTRMDYAARDKDAGGVRECYKKMEMAISDILSRI 185
           L   LF+ +  +D+AA+ K      + +   + A+ D+L+++
Sbjct: 171 LTGKLFSTIDDLDHAAKMKSTPEAEKYFAATKDALGDVLAKL 212

[Close]

BLAST of MELO3C025069.2 vs. TrEMBL
Match: tr|A0A1S3CIJ1|A0A1S3CIJ1_CUCME (psbQ-like protein 3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501351 PE=4 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 3.9e-93
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 1   MAKLIPISLSNLTNRIHFSSSPLTISFQSFNTTPNCSKNAKNISRRLGLGFIALMASSVT 60
           MAKLIPISLSNLTNRIHFSSSPLTISFQSFNTTPNCSKNAKNISRRLGLGFIALMASSVT
Sbjct: 1   MAKLIPISLSNLTNRIHFSSSPLTISFQSFNTTPNCSKNAKNISRRLGLGFIALMASSVT 60

Query: 61  AIPAEVANALNLKLIAPEQSLDEAERGIRGHAEALLQVRSLMESEAWKEAQKRLRSTSAL 120
           AIPAEVANALNLKLIAPEQSLDEAERGIRGHAEALLQVRSLMESEAWKEAQKRLRSTSAL
Sbjct: 61  AIPAEVANALNLKLIAPEQSLDEAERGIRGHAEALLQVRSLMESEAWKEAQKRLRSTSAL 120

Query: 121 LKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKDAGGVRECYKKMEMAISDI 180
           LKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKDAGGVRECYKKMEMAISDI
Sbjct: 121 LKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKDAGGVRECYKKMEMAISDI 180

Query: 181 LSRI 185
           LSRI
Sbjct: 181 LSRI 184

[Close]

BLAST of MELO3C025069.2 vs. TrEMBL
Match: tr|A0A0A0KT23|A0A0A0KT23_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G315360 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 3.0e-85
Identity = 173/184 (94.02%), Postives = 175/184 (95.11%), Query Frame = 0


Query: 1   MAKLIPISLSNLTNRIHFSSSPLTISFQSFNTTPNCSKNAKNISRRLGLGFIALMASSVT 60
           MAKLIPISLSNLTNRIHFS SPLTISF SFNTTPNCS NA NISRRLGLGFIALMASSVT
Sbjct: 1   MAKLIPISLSNLTNRIHFSYSPLTISFPSFNTTPNCSNNATNISRRLGLGFIALMASSVT 60

Query: 61  AIPAEVANALNLKLIAPEQSLDEAERGIRGHAEALLQVRSLMESEAWKEAQKRLRSTSAL 120
           AIPAEVANAL+LKLIAPEQSLDEAE GIR HAEALLQVRSL+ESEAWKEAQKRLRSTSAL
Sbjct: 61  AIPAEVANALDLKLIAPEQSLDEAESGIRRHAEALLQVRSLIESEAWKEAQKRLRSTSAL 120

Query: 121 LKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKDAGGVRECYKKMEMAISDI 180
           LKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKD GGV E YKKMEMAISDI
Sbjct: 121 LKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKDVGGVWESYKKMEMAISDI 180

Query: 181 LSRI 185
           LSRI
Sbjct: 181 LSRI 184

[Close]

BLAST of MELO3C025069.2 vs. TrEMBL
Match: tr|A0A061EGX6|A0A061EGX6_THECC (Calcium ion binding protein, putative isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_019126 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 7.4e-36
Identity = 93/184 (50.54%), Postives = 133/184 (72.28%), Query Frame = 0


Query: 1   MAKLIPISLSNLTNRIHFSSSPLTISFQSFNTTPNCSKNAKNISRRLGLGFIALMASSVT 60
           M  L PI +S   N+ + S + +T   +     P    ++ N+SRR+G+  IA MA  + 
Sbjct: 1   MIALRPILVSKY-NQPYSSKTLITCHVKPSKEMPQKLLHS-NMSRRVGV--IATMA-PLL 60

Query: 61  AIPAEVANALNLKLIAPEQSLDEAERGIRGHAEALLQVRSLMESEAWKEAQKRLRSTSAL 120
            I  E A  L+L+++APEQ+L+EAE G+  HA+ALLQVR L+ES++W+EAQK+LR +S+L
Sbjct: 61  LIREETACGLDLRMVAPEQTLEEAESGVENHAKALLQVRDLIESKSWREAQKQLRKSSSL 120

Query: 121 LKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKDAGGVRECYKKMEMAISDI 180
           LKQD+YTII+ KP +ERP LRKLYS LFNNVT++DYAARD+DA  V +CY  + +A++DI
Sbjct: 121 LKQDIYTIIQGKPGSERPPLRKLYSNLFNNVTKLDYAARDEDASRVWQCYDNIVLALNDI 179

Query: 181 LSRI 185
           LS++
Sbjct: 181 LSKL 179

[Close]

BLAST of MELO3C025069.2 vs. TrEMBL
Match: tr|F6HNZ9|F6HNZ9_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_12s0142g00310 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 3.7e-35
Identity = 97/177 (54.80%), Postives = 122/177 (68.93%), Query Frame = 0


Query: 20  SSPLTIS-------FQSFNTTPNCSKNAK-NISRRLGLGFIALMASSVTAIPA----EVA 79
           SSPL +S         SF    N  K  K N +RR+G   IA MA  + A  A    ++A
Sbjct: 55  SSPLYLSPNFICHLKPSFLLRENPEKVPKSNFTRRIGA--IATMAKVLLAREAIFNVKIA 114

Query: 80  NALNLKLIAPEQSLDEAERGIRGHAEALLQVRSLMESEAWKEAQKRLRSTSALLKQDLYT 139
           N  + K++AP Q+L+EAE GIRGHA ALLQV++L+ESEAWK+ QK LR +S+LLKQD+YT
Sbjct: 115 NGFDFKMVAPGQTLEEAESGIRGHALALLQVKALIESEAWKDMQKALRKSSSLLKQDIYT 174

Query: 140 IIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKDAGGVRECYKKMEMAISDILSRI 185
           II+ KP + RP LRKLYS LFNNVTR+DYAARD DA  V E Y+K+ + + DILSRI
Sbjct: 175 IIQSKPGSMRPQLRKLYSNLFNNVTRLDYAARDNDATQVWEYYEKIAITLDDILSRI 229

[Close]

BLAST of MELO3C025069.2 vs. TrEMBL
Match: tr|A5B0Z9|A5B0Z9_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_006311 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 3.7e-35
Identity = 97/177 (54.80%), Postives = 122/177 (68.93%), Query Frame = 0


Query: 20  SSPLTIS-------FQSFNTTPNCSKNAK-NISRRLGLGFIALMASSVTAIPA----EVA 79
           SSPL +S         SF    N  K  K N +RR+G   IA MA  + A  A    ++A
Sbjct: 10  SSPLYLSPTIICHLKPSFLLRENPEKVPKSNFTRRIGA--IATMAKVLLAREAIFNVKIA 69

Query: 80  NALNLKLIAPEQSLDEAERGIRGHAEALLQVRSLMESEAWKEAQKRLRSTSALLKQDLYT 139
           N  + K++AP Q+L+EAE GIRGHA ALLQV++L+ESEAWK+ QK LR +S+LLKQD+YT
Sbjct: 70  NGFDFKMVAPGQTLEEAESGIRGHALALLQVKALIESEAWKDMQKALRKSSSLLKQDIYT 129

Query: 140 IIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKDAGGVRECYKKMEMAISDILSRI 185
           II+ KP + RP LRKLYS LFNNVTR+DYAARD DA  V E Y+K+ + + DILSRI
Sbjct: 130 IIQSKPGSMRPQLRKLYSNLFNNVTRLDYAARDNDATQVWEYYEKIAITLDDILSRI 184

The following BLAST results are available for this feature:

BLAST of MELO3C025069.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008463126.1	5.9e-93	100.00	PREDICTED: psbQ-like protein 3, chloroplastic [Cucumis melo]	[more]
XP_004148913.1	4.5e-85	94.02	PREDICTED: psbQ-like protein 3, chloroplastic [Cucumis sativus] >KGN50891.1 hypo...	[more]
XP_022991100.1	1.4e-65	75.14	psbQ-like protein 3, chloroplastic isoform X1 [Cucurbita maxima]	[more]
XP_022962345.1	4.8e-63	74.19	psbQ-like protein 3, chloroplastic isoform X1 [Cucurbita moschata]	[more]
XP_023551782.1	1.4e-62	73.16	psbQ-like protein 3, chloroplastic [Cucurbita pepo subsp. pepo]	[more]

BLAST of MELO3C025069.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G01918.1	3.3e-21	44.95	PsbQ-like 3	[more]
AT4G21280.2	8.9e-11	24.58	photosystem II subunit QA	[more]
AT3G01440.1	4.7e-04	23.71	PsbQ-like 1	[more]

BLAST of MELO3C025069.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q2V4B2\|PQL3_ARATH	5.9e-20	44.95	PsbQ-like protein 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PQL3 PE=2 ...	[more]
sp\|Q9XFT3\|PSBQ1_ARATH	1.6e-09	24.58	Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Arabidopsis thaliana OX=3...	[more]
sp\|Q41048\|PSBQ1_MAIZE	6.8e-08	27.45	Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Zea mays OX=4577 GN=PSBQ1...	[more]
sp\|Q41806\|PSBQ2_MAIZE	8.8e-08	27.45	Oxygen-evolving enhancer protein 3-2, chloroplastic OS=Zea mays OX=4577 GN=PSBQ2...	[more]

BLAST of MELO3C025069.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CIJ1\|A0A1S3CIJ1_CUCME	3.9e-93	100.00	psbQ-like protein 3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501351 PE=4 ...	[more]
tr\|A0A0A0KT23\|A0A0A0KT23_CUCSA	3.0e-85	94.02	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G315360 PE=4 SV=1	[more]
tr\|A0A061EGX6\|A0A061EGX6_THECC	7.4e-36	50.54	Calcium ion binding protein, putative isoform 1 OS=Theobroma cacao OX=3641 GN=TC...	[more]
tr\|F6HNZ9\|F6HNZ9_VITVI	3.7e-35	54.80	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_12s0142g00310 PE=4 SV=...	[more]
tr\|A5B0Z9\|A5B0Z9_VITVI	3.7e-35	54.80	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_006311 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0019898	extrinsic component of membrane
GO:0009523	photosystem II
GO:0009654	photosystem II oxygen evolving complex

Vocabulary: **Biological Process**
Term	Definition
GO:0015979	photosynthesis

Vocabulary: **Molecular Function**
Term	Definition
GO:0005509	calcium ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR023222	PsbQ-like_dom_sf
IPR008797	PSII_PsbQ

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
biological_process	GO:0009767	photosynthetic electron transport chain
cellular_component	GO:0019898	extrinsic component of membrane
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0009654	photosystem II oxygen evolving complex
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0045156	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C025069.2.1	MELO3C025069.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008797	Oxygen-evolving enhancer protein 3	PFAM	PF05757	PsbQ	coord: 78..183 e-value: 1.1E-17 score: 64.3
IPR008797	Oxygen-evolving enhancer protein 3	PANTHER	PTHR33399	FAMILY NOT NAMED	coord: 15..184
None	No IPR available	GENE3D	G3DSA:1.20.120.290		coord: 60..184 e-value: 9.2E-31 score: 108.9
None	No IPR available	PANTHER	PTHR33399:SF6	PSBQ-LIKE PROTEIN 3, CHLOROPLASTIC	coord: 15..184
IPR023222	PsbQ-like domain superfamily	SUPERFAMILY	SSF101112	Oxygen-evolving enhancer protein 3,	coord: 77..184

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C025069.2	Csa5G315360	Cucumber (Chinese Long) v2	cumedB344
MELO3C025069.2	CSPI05G13290	Wild cucumber (PI 183967)	cpimedB335
MELO3C025069.2	CmaCh04G022550	Cucurbita maxima (Rimu)	cmamedB721
MELO3C025069.2	Lsi09G008750	Bottle gourd (USVL1VR-Ls)	lsimedB014
MELO3C025069.2	Cp4.1LG01g19590	Cucurbita pepo (Zucchini)	cpemedB419
MELO3C025069.2	CsGy5G013320	Cucumber (Gy14) v2	cgybmedB304
MELO3C025069.2	Cla009103	Watermelon (97103) v1	medwmB031
MELO3C025069.2	ClCG01G008280	Watermelon (Charleston Gray)	medwcgB018
MELO3C025069.2	Cla97C01G008630	Watermelon (97103) v2	medwmbB008
MELO3C025069.2	Carg18301	Silver-seed gourd	carmedB0537
MELO3C025069.2	CsaV3_5G020220	Cucumber (Chinese Long) v3	cucmedB355

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C025069.2	Cucumber (Chinese Long) v3	cucmedB344
MELO3C025069.2	Wax gourd	medwgoB015
MELO3C025069.2	Cucumber (Gy14) v2	cgybmedB295
MELO3C025069.2	Cucurbita maxima (Rimu)	cmamedB286
MELO3C025069.2	Cucurbita moschata (Rifu)	cmomedB272
MELO3C025069.2	Cucurbita moschata (Rifu)	cmomedB714
MELO3C025069.2	Cucurbita pepo (Zucchini)	cpemedB184
MELO3C025069.2	Wild cucumber (PI 183967)	cpimedB346
MELO3C025069.2	Cucumber (Chinese Long) v2	cumedB332
MELO3C025069.2	Silver-seed gourd	carmedB0832