MELO3C025069 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C025069
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Oxygen-evolving enhancer protein 3-1
Location	chr9 : 14851275 .. 14852256 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAGTTCTATCATCTCACATCTCCATACATAGTCACAGAGTTTGCATAAAGCTTCGCTCTCAGTACTCCAATGGCGAAATTAATCCCAATCTCACTCTCAAACCTCACTAATCGCATCCATTTCTCTTCCTCTCCCCTTACAATCTCCTTCCAATCCTTCAATACCACACCCAATTGTTCTAAAAACGCCAAAAACATAAGCAGAAGGCTAGGGTTAGGATTCATAGCTTTAATGGCGTCGTCAGTAACTGCGATACCGGCAGAAGTGGCGAATGCTTTAAATCTGAAATTGATCGCGCCGGAGCAGAGCTTAGACGAAGCTGAGCGCGGAATCAGAGGCCACGCGGAAGCGCTTTTGCAGGTGAGAAGCTTAATGGAATCGGAAGCTTGGAAGGAAGCTCAGAAGCGGTTGAGAAGCACTTCGGCGCTGCTTAAACAAGATCTGTACACTATAATTGAATACAAACCGCCGGCGGAGAGGCCTGCTCTTAGGAAACTCTATTCTCTTCTCTTCAACAACGTTACGCGAGTAAGTGTGATTATAATTAAGGCTTCTCATCTTGAAGAATTTTGTGGTGTGTGTTATTCGATTTCATATGGATAATTCTCCTGTTTCTAGATGGATTATGCGGCGAGAGATAAAGATGCAGGAGGAGTTAGGGAGTGCTATAAGAAGATGGAGATGGCCATCTCTGATATTTTGTCAAGAATTTAAAAAGATAAGTGAAGGTTTTTGATTCTGATCGATCAATTAATTCGATGCAATGAAATCGAAAATTTAGTTTGGTGTTCTTCAAATCGGAGGATTCTAGTTCTTGATCAGTAATTGTCATAAATTTTGTTAGTTGAGTTCCAATATTTTAAATGTGTGTGGCTGAATTTTAGGTTTCCAAAATTATAGATAGTTATAGATTTTCAATGGTAGATATTTGTTAGTATTTTGACTATTGTGTTTGTTCAATAGAATTTTTATTCGTTGAAT

mRNA sequence

ATAGTTCTATCATCTCACATCTCCATACATAGTCACAGAGTTTGCATAAAGCTTCGCTCTCAGTACTCCAATGGCGAAATTAATCCCAATCTCACTCTCAAACCTCACTAATCGCATCCATTTCTCTTCCTCTCCCCTTACAATCTCCTTCCAATCCTTCAATACCACACCCAATTGTTCTAAAAACGCCAAAAACATAAGCAGAAGGCTAGGGTTAGGATTCATAGCTTTAATGGCGTCGTCAGTAACTGCGATACCGGCAGAAGTGGCGAATGCTTTAAATCTGAAATTGATCGCGCCGGAGCAGAGCTTAGACGAAGCTGAGCGCGGAATCAGAGGCCACGCGGAAGCGCTTTTGCAGGTGAGAAGCTTAATGGAATCGGAAGCTTGGAAGGAAGCTCAGAAGCGGTTGAGAAGCACTTCGGCGCTGCTTAAACAAGATCTGTACACTATAATTGAATACAAACCGCCGGCGGAGAGGCCTGCTCTTAGGAAACTCTATTCTCTTCTCTTCAACAACGTTACGCGAATGGATTATGCGGCGAGAGATAAAGATGCAGGAGGAGTTAGGGAGTGCTATAAGAAGATGGAGATGGCCATCTCTGATATTTTGTCAAGAATTTAAAAAGATAAGTGAAGGTTTTTGATTCTGATCGATCAATTAATTCGATGCAATGAAATCGAAAATTTAGTTTGGTGTTCTTCAAATCGGAGGATTCTAGTTCTTGATCAGTAATTGTCATAAATTTTGTTAGTTGAGTTCCAATATTTTAAATGTGTGTGGCTGAATTTTAGGTTTCCAAAATTATAGATAGTTATAGATTTTCAATGGTAGATATTTGTTAGTATTTTGACTATTGTGTTTGTTCAATAGAATTTTTATTCGTTGAAT

Coding sequence (CDS)

ATGGCGAAATTAATCCCAATCTCACTCTCAAACCTCACTAATCGCATCCATTTCTCTTCCTCTCCCCTTACAATCTCCTTCCAATCCTTCAATACCACACCCAATTGTTCTAAAAACGCCAAAAACATAAGCAGAAGGCTAGGGTTAGGATTCATAGCTTTAATGGCGTCGTCAGTAACTGCGATACCGGCAGAAGTGGCGAATGCTTTAAATCTGAAATTGATCGCGCCGGAGCAGAGCTTAGACGAAGCTGAGCGCGGAATCAGAGGCCACGCGGAAGCGCTTTTGCAGGTGAGAAGCTTAATGGAATCGGAAGCTTGGAAGGAAGCTCAGAAGCGGTTGAGAAGCACTTCGGCGCTGCTTAAACAAGATCTGTACACTATAATTGAATACAAACCGCCGGCGGAGAGGCCTGCTCTTAGGAAACTCTATTCTCTTCTCTTCAACAACGTTACGCGAATGGATTATGCGGCGAGAGATAAAGATGCAGGAGGAGTTAGGGAGTGCTATAAGAAGATGGAGATGGCCATCTCTGATATTTTGTCAAGAATTTAA

Protein sequence

MAKLIPISLSNLTNRIHFSSSPLTISFQSFNTTPNCSKNAKNISRRLGLGFIALMASSVTAIPAEVANALNLKLIAPEQSLDEAERGIRGHAEALLQVRSLMESEAWKEAQKRLRSTSALLKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKDAGGVRECYKKMEMAISDILSRI*

Homology

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BLAST of MELO3C025069 vs. Swiss-Prot
Match: PQL3_ARATH (PsbQ-like protein 3, chloroplastic OS=Arabidopsis thaliana GN=PQL3 PE=2 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 3.4e-20
Identity = 49/109 (44.95%), Postives = 71/109 (65.14%), Query Frame = 1


Query: 77  PEQSLDEAERGIRGHAEALLQVRSLM-ESEAWKEAQKRLRSTSALLKQDLYTIIEYKPPA 136
           PE++++ A+ G+R +AE + +++ +M E + WKE  K LR +++ +KQD Y II+ KPP 
Sbjct: 79  PERTVELAQEGLRKNAENIKRIKEIMIEKKLWKEGGKELRRSASNMKQDFYLIIQAKPPK 138

Query: 137 ERPALRKLYSLLFNNVTRMDYAARDKDAGGVRECYKKMEMAISDILSRI 185
           +RP  R LYS LFN++T+MDYAARD D   V E Y  +   + DI  RI
Sbjct: 139 DRPLFRSLYSSLFNSITKMDYAARDGDETKVLEYYINIVAILDDIFPRI 187

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BLAST of MELO3C025069 vs. Swiss-Prot
Match: PSBQ1_ARATH (Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Arabidopsis thaliana GN=PSBQ1 PE=1 SV=3)

HSP 1 Score: 67.4 bits (163), Expect = 1.9e-10
Identity = 44/179 (24.58%), Postives = 87/179 (48.60%), Query Frame = 1


Query: 37  SKNAKNISRRLGLGFIALMASSVTAIPAEVANALNLKLIAP--------------EQSLD 96
           ++ ++  SRR  +G +A   +  + + A +A+A+++K+  P              +Q+ D
Sbjct: 45  AQQSEETSRRSVIGLVAAGLAGGSFVQAVLADAISIKVGPPPAPSGGLPAGTDNSDQARD 104

Query: 97  -----------------EAERGIRGHAEALLQVRSLMESEAWKEAQKRLRSTSALLKQDL 156
                            EA    +  A+ ++ V+ L++ +AW   Q  LRS ++ L+ DL
Sbjct: 105 FALALKDRFYLQPLPPTEAAARAKESAKDIINVKPLIDRKAWPYVQNDLRSKASYLRYDL 164

Query: 157 YTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKDAGGVRECYKKMEMAISDILSRI 185
            TII  KP  E+ +L+ L + LF+ +  +DYAA+ K      + Y +   A++++L+++
Sbjct: 165 NTIISSKPKDEKKSLKDLTTKLFDTIDNLDYAAKKKSPSQAEKYYAETVSALNEVLAKL 223

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BLAST of MELO3C025069 vs. Swiss-Prot
Match: PSBQ_ORYSI (Oxygen-evolving enhancer protein 3, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_025465 PE=1 SV=2)

HSP 1 Score: 54.7 bits (130), Expect = 1.3e-06
Identity = 31/108 (28.70%), Postives = 54/108 (50.00%), Query Frame = 1


Query: 79  QSLDEAERGIRGH--AEALLQVRSLMESEAWKEAQKRLRSTSALLKQDLYTIIEYKPPAE 138
           Q L  AE   R    A+ ++ ++ L+E + W   +  LR  ++ L+ DL T+I  KP  E
Sbjct: 109 QPLPPAEAAARAKESAQDIINLKPLIEKKQWPFVRDDLRLRASYLRYDLKTVINSKPKDE 168

Query: 139 RPALRKLYSLLFNNVTRMDYAARDKDAGGVRECYKKMEMAISDILSRI 185
           +  L+ L   LF  +  +D+AA+ K      + Y   + A+ D+L+++
Sbjct: 169 KKGLKDLTGKLFATIDGLDHAAKIKSPEEAEKYYTLTKSALGDVLAKL 216

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BLAST of MELO3C025069 vs. Swiss-Prot
Match: PSBQ_ORYSJ (Oxygen-evolving enhancer protein 3, chloroplastic OS=Oryza sativa subsp. japonica GN=Os07g0544800 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.3e-06
Identity = 31/108 (28.70%), Postives = 54/108 (50.00%), Query Frame = 1


Query: 79  QSLDEAERGIRGH--AEALLQVRSLMESEAWKEAQKRLRSTSALLKQDLYTIIEYKPPAE 138
           Q L  AE   R    A+ ++ ++ L+E + W   +  LR  ++ L+ DL T+I  KP  E
Sbjct: 109 QPLPPAEAAARAKESAQDIINLKPLIEKKQWPFVRDDLRLRASYLRYDLKTVINSKPKDE 168

Query: 139 RPALRKLYSLLFNNVTRMDYAARDKDAGGVRECYKKMEMAISDILSRI 185
           +  L+ L   LF  +  +D+AA+ K      + Y   + A+ D+L+++
Sbjct: 169 KKGLKDLTGKLFATIDGLDHAAKIKSPEEAEKYYTLTKSALGDVLAKL 216

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BLAST of MELO3C025069 vs. TrEMBL
Match: A0A0A0KT23_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G315360 PE=4 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 2.9e-87
Identity = 173/184 (94.02%), Postives = 175/184 (95.11%), Query Frame = 1


Query: 1   MAKLIPISLSNLTNRIHFSSSPLTISFQSFNTTPNCSKNAKNISRRLGLGFIALMASSVT 60
           MAKLIPISLSNLTNRIHFS SPLTISF SFNTTPNCS NA NISRRLGLGFIALMASSVT
Sbjct: 1   MAKLIPISLSNLTNRIHFSYSPLTISFPSFNTTPNCSNNATNISRRLGLGFIALMASSVT 60

Query: 61  AIPAEVANALNLKLIAPEQSLDEAERGIRGHAEALLQVRSLMESEAWKEAQKRLRSTSAL 120
           AIPAEVANAL+LKLIAPEQSLDEAE GIR HAEALLQVRSL+ESEAWKEAQKRLRSTSAL
Sbjct: 61  AIPAEVANALDLKLIAPEQSLDEAESGIRRHAEALLQVRSLIESEAWKEAQKRLRSTSAL 120

Query: 121 LKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKDAGGVRECYKKMEMAISDI 180
           LKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKD GGV E YKKMEMAISDI
Sbjct: 121 LKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKDVGGVWESYKKMEMAISDI 180

Query: 181 LSRI 185
           LSRI
Sbjct: 181 LSRI 184

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BLAST of MELO3C025069 vs. TrEMBL
Match: A0A061EGX6_THECC (Calcium ion binding protein, putative isoform 1 OS=Theobroma cacao GN=TCM_019126 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 7.4e-38
Identity = 93/184 (50.54%), Postives = 133/184 (72.28%), Query Frame = 1


Query: 1   MAKLIPISLSNLTNRIHFSSSPLTISFQSFNTTPNCSKNAKNISRRLGLGFIALMASSVT 60
           M  L PI +S   N+ + S + +T   +     P    ++ N+SRR+G+  IA MA  + 
Sbjct: 1   MIALRPILVSKY-NQPYSSKTLITCHVKPSKEMPQKLLHS-NMSRRVGV--IATMAP-LL 60

Query: 61  AIPAEVANALNLKLIAPEQSLDEAERGIRGHAEALLQVRSLMESEAWKEAQKRLRSTSAL 120
            I  E A  L+L+++APEQ+L+EAE G+  HA+ALLQVR L+ES++W+EAQK+LR +S+L
Sbjct: 61  LIREETACGLDLRMVAPEQTLEEAESGVENHAKALLQVRDLIESKSWREAQKQLRKSSSL 120

Query: 121 LKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKDAGGVRECYKKMEMAISDI 180
           LKQD+YTII+ KP +ERP LRKLYS LFNNVT++DYAARD+DA  V +CY  + +A++DI
Sbjct: 121 LKQDIYTIIQGKPGSERPPLRKLYSNLFNNVTKLDYAARDEDASRVWQCYDNIVLALNDI 179

Query: 181 LSRI 185
           LS++
Sbjct: 181 LSKL 179

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BLAST of MELO3C025069 vs. TrEMBL
Match: A5B0Z9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_006311 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 8.1e-37
Identity = 97/177 (54.80%), Postives = 122/177 (68.93%), Query Frame = 1


Query: 20  SSPLTIS-------FQSFNTTPNCSKNAK-NISRRLGLGFIALMASSVTAIPA----EVA 79
           SSPL +S         SF    N  K  K N +RR+G   IA MA  + A  A    ++A
Sbjct: 10  SSPLYLSPTIICHLKPSFLLRENPEKVPKSNFTRRIGA--IATMAKVLLAREAIFNVKIA 69

Query: 80  NALNLKLIAPEQSLDEAERGIRGHAEALLQVRSLMESEAWKEAQKRLRSTSALLKQDLYT 139
           N  + K++AP Q+L+EAE GIRGHA ALLQV++L+ESEAWK+ QK LR +S+LLKQD+YT
Sbjct: 70  NGFDFKMVAPGQTLEEAESGIRGHALALLQVKALIESEAWKDMQKALRKSSSLLKQDIYT 129

Query: 140 IIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKDAGGVRECYKKMEMAISDILSRI 185
           II+ KP + RP LRKLYS LFNNVTR+DYAARD DA  V E Y+K+ + + DILSRI
Sbjct: 130 IIQSKPGSMRPQLRKLYSNLFNNVTRLDYAARDNDATQVWEYYEKIAITLDDILSRI 184

[Close]

BLAST of MELO3C025069 vs. TrEMBL
Match: F6HNZ9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0142g00310 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 8.1e-37
Identity = 97/177 (54.80%), Postives = 122/177 (68.93%), Query Frame = 1


Query: 20  SSPLTISFQ-------SFNTTPNCSKNAK-NISRRLGLGFIALMASSVTAIPA----EVA 79
           SSPL +S         SF    N  K  K N +RR+G   IA MA  + A  A    ++A
Sbjct: 55  SSPLYLSPNFICHLKPSFLLRENPEKVPKSNFTRRIGA--IATMAKVLLAREAIFNVKIA 114

Query: 80  NALNLKLIAPEQSLDEAERGIRGHAEALLQVRSLMESEAWKEAQKRLRSTSALLKQDLYT 139
           N  + K++AP Q+L+EAE GIRGHA ALLQV++L+ESEAWK+ QK LR +S+LLKQD+YT
Sbjct: 115 NGFDFKMVAPGQTLEEAESGIRGHALALLQVKALIESEAWKDMQKALRKSSSLLKQDIYT 174

Query: 140 IIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKDAGGVRECYKKMEMAISDILSRI 185
           II+ KP + RP LRKLYS LFNNVTR+DYAARD DA  V E Y+K+ + + DILSRI
Sbjct: 175 IIQSKPGSMRPQLRKLYSNLFNNVTRLDYAARDNDATQVWEYYEKIAITLDDILSRI 229

[Close]

BLAST of MELO3C025069 vs. TrEMBL
Match: A0A067E6V8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030036mg PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.5e-35
Identity = 79/147 (53.74%), Postives = 112/147 (76.19%), Query Frame = 1


Query: 42  NISRRLGLGFIALMASSVTAIPA----EVANALNLKLIAPEQSLDEAERGIRGHAEALLQ 101
           NISRR+G+  IA+ AS++ A  A    ++ANA   +++AP+Q++++AE GIR HA++LL 
Sbjct: 40  NISRRIGV--IAVTASTMLAREAIFREDIANAFEFRMVAPDQTVEQAESGIRYHAQSLLH 99

Query: 102 VRSLMESEAWKEAQKRLRSTSALLKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMDYA 161
           V++L+ESE+W E QK LR++SA LKQD+YT+I  KP  ERP LRKLYS LFN VT++DYA
Sbjct: 100 VKALLESESWSEVQKALRASSASLKQDIYTLINNKPATERPQLRKLYSDLFNGVTKLDYA 159

Query: 162 ARDKDAGGVRECYKKMEMAISDILSRI 185
           ARDKD   V +CY+ + +A+  ILSR+
Sbjct: 160 ARDKDVSRVHQCYENVVVALDSILSRL 184

[Close]

BLAST of MELO3C025069 vs. TAIR10
Match: AT2G01918.1 (AT2G01918.1 PsbQ-like 3)

HSP 1 Score: 99.8 bits (247), Expect = 1.9e-21
Identity = 49/109 (44.95%), Postives = 71/109 (65.14%), Query Frame = 1


Query: 77  PEQSLDEAERGIRGHAEALLQVRSLM-ESEAWKEAQKRLRSTSALLKQDLYTIIEYKPPA 136
           PE++++ A+ G+R +AE + +++ +M E + WKE  K LR +++ +KQD Y II+ KPP 
Sbjct: 79  PERTVELAQEGLRKNAENIKRIKEIMIEKKLWKEGGKELRRSASNMKQDFYLIIQAKPPK 138

Query: 137 ERPALRKLYSLLFNNVTRMDYAARDKDAGGVRECYKKMEMAISDILSRI 185
           +RP  R LYS LFN++T+MDYAARD D   V E Y  +   + DI  RI
Sbjct: 139 DRPLFRSLYSSLFNSITKMDYAARDGDETKVLEYYINIVAILDDIFPRI 187

[Close]

BLAST of MELO3C025069 vs. TAIR10
Match: AT4G21280.2 (AT4G21280.2 photosystem II subunit QA)

HSP 1 Score: 67.4 bits (163), Expect = 1.1e-11
Identity = 44/179 (24.58%), Postives = 87/179 (48.60%), Query Frame = 1


Query: 37  SKNAKNISRRLGLGFIALMASSVTAIPAEVANALNLKLIAP--------------EQSLD 96
           ++ ++  SRR  +G +A   +  + + A +A+A+++K+  P              +Q+ D
Sbjct: 45  AQQSEETSRRSVIGLVAAGLAGGSFVQAVLADAISIKVGPPPAPSGGLPAGTDNSDQARD 104

Query: 97  -----------------EAERGIRGHAEALLQVRSLMESEAWKEAQKRLRSTSALLKQDL 156
                            EA    +  A+ ++ V+ L++ +AW   Q  LRS ++ L+ DL
Sbjct: 105 FALALKDRFYLQPLPPTEAAARAKESAKDIINVKPLIDRKAWPYVQNDLRSKASYLRYDL 164

Query: 157 YTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKDAGGVRECYKKMEMAISDILSRI 185
            TII  KP  E+ +L+ L + LF+ +  +DYAA+ K      + Y +   A++++L+++
Sbjct: 165 NTIISSKPKDEKKSLKDLTTKLFDTIDNLDYAAKKKSPSQAEKYYAETVSALNEVLAKL 223

[Close]

BLAST of MELO3C025069 vs. NCBI nr
Match: gi|659126329|ref|XP_008463126.1| (PREDICTED: psbQ-like protein 3, chloroplastic [Cucumis melo])

HSP 1 Score: 355.5 bits (911), Expect = 5.5e-95
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 1


Query: 1   MAKLIPISLSNLTNRIHFSSSPLTISFQSFNTTPNCSKNAKNISRRLGLGFIALMASSVT 60
           MAKLIPISLSNLTNRIHFSSSPLTISFQSFNTTPNCSKNAKNISRRLGLGFIALMASSVT
Sbjct: 1   MAKLIPISLSNLTNRIHFSSSPLTISFQSFNTTPNCSKNAKNISRRLGLGFIALMASSVT 60

Query: 61  AIPAEVANALNLKLIAPEQSLDEAERGIRGHAEALLQVRSLMESEAWKEAQKRLRSTSAL 120
           AIPAEVANALNLKLIAPEQSLDEAERGIRGHAEALLQVRSLMESEAWKEAQKRLRSTSAL
Sbjct: 61  AIPAEVANALNLKLIAPEQSLDEAERGIRGHAEALLQVRSLMESEAWKEAQKRLRSTSAL 120

Query: 121 LKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKDAGGVRECYKKMEMAISDI 180
           LKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKDAGGVRECYKKMEMAISDI
Sbjct: 121 LKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKDAGGVRECYKKMEMAISDI 180

Query: 181 LSRI 185
           LSRI
Sbjct: 181 LSRI 184

[Close]

BLAST of MELO3C025069 vs. NCBI nr
Match: gi|449462369|ref|XP_004148913.1| (PREDICTED: psbQ-like protein 3, chloroplastic [Cucumis sativus])

HSP 1 Score: 329.3 bits (843), Expect = 4.2e-87
Identity = 173/184 (94.02%), Postives = 175/184 (95.11%), Query Frame = 1


Query: 1   MAKLIPISLSNLTNRIHFSSSPLTISFQSFNTTPNCSKNAKNISRRLGLGFIALMASSVT 60
           MAKLIPISLSNLTNRIHFS SPLTISF SFNTTPNCS NA NISRRLGLGFIALMASSVT
Sbjct: 1   MAKLIPISLSNLTNRIHFSYSPLTISFPSFNTTPNCSNNATNISRRLGLGFIALMASSVT 60

Query: 61  AIPAEVANALNLKLIAPEQSLDEAERGIRGHAEALLQVRSLMESEAWKEAQKRLRSTSAL 120
           AIPAEVANAL+LKLIAPEQSLDEAE GIR HAEALLQVRSL+ESEAWKEAQKRLRSTSAL
Sbjct: 61  AIPAEVANALDLKLIAPEQSLDEAESGIRRHAEALLQVRSLIESEAWKEAQKRLRSTSAL 120

Query: 121 LKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKDAGGVRECYKKMEMAISDI 180
           LKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKD GGV E YKKMEMAISDI
Sbjct: 121 LKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKDVGGVWESYKKMEMAISDI 180

Query: 181 LSRI 185
           LSRI
Sbjct: 181 LSRI 184

[Close]

BLAST of MELO3C025069 vs. NCBI nr
Match: gi|1009110497|ref|XP_015895821.1| (PREDICTED: psbQ-like protein 3, chloroplastic [Ziziphus jujuba])

HSP 1 Score: 166.4 bits (420), Expect = 4.7e-38
Identity = 85/142 (59.86%), Postives = 108/142 (76.06%), Query Frame = 1


Query: 43  ISRRLGLGFIALMASSVTAIPAEVANALNLKLIAPEQSLDEAERGIRGHAEALLQVRSLM 102
           I+RR      +L+ +    +  EVA  L+L+LIAP+QS+ EAE GIRGHA ALLQV++L+
Sbjct: 41  INRRRAAMIASLLLAREAVLKQEVAYGLDLRLIAPDQSIQEAESGIRGHARALLQVKALI 100

Query: 103 ESEAWKEAQKRLRSTSALLKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKD 162
           +SE+W EAQK LR +SALLKQD+YTII+ KP  ERP LRKLYS LFNNV+R+DYAARD D
Sbjct: 101 DSESWVEAQKALRKSSALLKQDVYTIIQNKPATERPQLRKLYSDLFNNVSRLDYAARDGD 160

Query: 163 AGGVRECYKKMEMAISDILSRI 185
              V  CY+ + +A+SDILSRI
Sbjct: 161 ESSVLRCYENIVVALSDILSRI 182

[Close]

BLAST of MELO3C025069 vs. NCBI nr
Match: gi|590651808|ref|XP_007032986.1| (Calcium ion binding protein, putative isoform 1 [Theobroma cacao])

HSP 1 Score: 165.2 bits (417), Expect = 1.1e-37
Identity = 93/184 (50.54%), Postives = 133/184 (72.28%), Query Frame = 1


Query: 1   MAKLIPISLSNLTNRIHFSSSPLTISFQSFNTTPNCSKNAKNISRRLGLGFIALMASSVT 60
           M  L PI +S   N+ + S + +T   +     P    ++ N+SRR+G+  IA MA  + 
Sbjct: 1   MIALRPILVSKY-NQPYSSKTLITCHVKPSKEMPQKLLHS-NMSRRVGV--IATMAP-LL 60

Query: 61  AIPAEVANALNLKLIAPEQSLDEAERGIRGHAEALLQVRSLMESEAWKEAQKRLRSTSAL 120
            I  E A  L+L+++APEQ+L+EAE G+  HA+ALLQVR L+ES++W+EAQK+LR +S+L
Sbjct: 61  LIREETACGLDLRMVAPEQTLEEAESGVENHAKALLQVRDLIESKSWREAQKQLRKSSSL 120

Query: 121 LKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKDAGGVRECYKKMEMAISDI 180
           LKQD+YTII+ KP +ERP LRKLYS LFNNVT++DYAARD+DA  V +CY  + +A++DI
Sbjct: 121 LKQDIYTIIQGKPGSERPPLRKLYSNLFNNVTKLDYAARDEDASRVWQCYDNIVLALNDI 179

Query: 181 LSRI 185
           LS++
Sbjct: 181 LSKL 179

[Close]

BLAST of MELO3C025069 vs. NCBI nr
Match: gi|147853522|emb|CAN78534.1| (hypothetical protein VITISV_006311 [Vitis vinifera])

HSP 1 Score: 161.8 bits (408), Expect = 1.2e-36
Identity = 97/177 (54.80%), Postives = 122/177 (68.93%), Query Frame = 1


Query: 20  SSPLTIS-------FQSFNTTPNCSKNAK-NISRRLGLGFIALMASSVTAIPA----EVA 79
           SSPL +S         SF    N  K  K N +RR+G   IA MA  + A  A    ++A
Sbjct: 10  SSPLYLSPTIICHLKPSFLLRENPEKVPKSNFTRRIGA--IATMAKVLLAREAIFNVKIA 69

Query: 80  NALNLKLIAPEQSLDEAERGIRGHAEALLQVRSLMESEAWKEAQKRLRSTSALLKQDLYT 139
           N  + K++AP Q+L+EAE GIRGHA ALLQV++L+ESEAWK+ QK LR +S+LLKQD+YT
Sbjct: 70  NGFDFKMVAPGQTLEEAESGIRGHALALLQVKALIESEAWKDMQKALRKSSSLLKQDIYT 129

Query: 140 IIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKDAGGVRECYKKMEMAISDILSRI 185
           II+ KP + RP LRKLYS LFNNVTR+DYAARD DA  V E Y+K+ + + DILSRI
Sbjct: 130 IIQSKPGSMRPQLRKLYSNLFNNVTRLDYAARDNDATQVWEYYEKIAITLDDILSRI 184

The following BLAST results are available for this feature:

BLAST of MELO3C025069 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PQL3_ARATH	3.4e-20	44.95	PsbQ-like protein 3, chloroplastic OS=Arabidopsis thaliana GN=PQL3 PE=2 SV=1	[more]
PSBQ1_ARATH	1.9e-10	24.58	Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Arabidopsis thaliana GN=P...	[more]
PSBQ_ORYSI	1.3e-06	28.70	Oxygen-evolving enhancer protein 3, chloroplastic OS=Oryza sativa subsp. indica ...	[more]
PSBQ_ORYSJ	1.3e-06	28.70	Oxygen-evolving enhancer protein 3, chloroplastic OS=Oryza sativa subsp. japonic...	[more]

BLAST of MELO3C025069 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KT23_CUCSA	2.9e-87	94.02	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G315360 PE=4 SV=1	[more]
A0A061EGX6_THECC	7.4e-38	50.54	Calcium ion binding protein, putative isoform 1 OS=Theobroma cacao GN=TCM_019126...	[more]
A5B0Z9_VITVI	8.1e-37	54.80	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_006311 PE=4 SV=1	[more]
F6HNZ9_VITVI	8.1e-37	54.80	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0142g00310 PE=4 SV=...	[more]
A0A067E6V8_CITSI	1.5e-35	53.74	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030036mg PE=4 SV=1	[more]

BLAST of MELO3C025069 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G01918.1	1.9e-21	44.95	PsbQ-like 3	[more]
AT4G21280.2	1.1e-11	24.58	photosystem II subunit QA	[more]

BLAST of MELO3C025069 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659126329\|ref\|XP_008463126.1\|	5.5e-95	100.00	PREDICTED: psbQ-like protein 3, chloroplastic [Cucumis melo]	[more]
gi\|449462369\|ref\|XP_004148913.1\|	4.2e-87	94.02	PREDICTED: psbQ-like protein 3, chloroplastic [Cucumis sativus]	[more]
gi\|1009110497\|ref\|XP_015895821.1\|	4.7e-38	59.86	PREDICTED: psbQ-like protein 3, chloroplastic [Ziziphus jujuba]	[more]
gi\|590651808\|ref\|XP_007032986.1\|	1.1e-37	50.54	Calcium ion binding protein, putative isoform 1 [Theobroma cacao]	[more]
gi\|147853522\|emb\|CAN78534.1\|	1.2e-36	54.80	hypothetical protein VITISV_006311 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008797	PSII_PsbQ
IPR023222	PsbQ-like_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0005509	calcium ion binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0009523	photosystem II
GO:0009654	photosystem II oxygen evolving complex
GO:0019898	extrinsic component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0015979	photosynthesis

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009767	photosynthetic electron transport chain
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0019898	extrinsic component of membrane
cellular_component	GO:0009654	photosystem II oxygen evolving complex
cellular_component	GO:0009523	photosystem II
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0045156	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU50377	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C025069T1	MELO3C025069T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU50377	MU50377	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008797	Oxygen-evolving enhancer protein 3	PFAM	PF05757	PsbQ	coord: 78..183 score: 1.1
IPR023222	PsbQ-like domain	GENE3D	G3DSA:1.20.120.290		coord: 69..184 score: 7.7
IPR023222	PsbQ-like domain	unknown	SSF101112	Oxygen-evolving enhancer protein 3,	coord: 77..184 score: 6.02
None	No IPR available	PANTHER	PTHR33399	FAMILY NOT NAMED	coord: 1..184 score: 1.1
None	No IPR available	PANTHER	PTHR33399:SF6	SUBFAMILY NOT NAMED	coord: 1..184 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C025069	Csa5G315360	Cucumber (Chinese Long) v2	cumeB365
MELO3C025069	Cla009103	Watermelon (97103) v1	mewmB032
MELO3C025069	ClCG01G008280	Watermelon (Charleston Gray)	mewcgB019
MELO3C025069	Cla97C01G008630	Watermelon (97103) v2	mewmbB009
MELO3C025069	CSPI05G13290	Wild cucumber (PI 183967)	cpimeB345
MELO3C025069	CmaCh04G022550	Cucurbita maxima (Rimu)	cmameB635
MELO3C025069	Lsi09G008750	Bottle gourd (USVL1VR-Ls)	lsimeB013
MELO3C025069	Cp4.1LG01g19590	Cucurbita pepo (Zucchini)	cpemeB359
MELO3C025069	CsGy5G013320	Cucumber (Gy14) v2	cgybmeB304
MELO3C025069	Carg18301	Silver-seed gourd	carmeB0531
MELO3C025069	CsaV3_5G020220	Cucumber (Chinese Long) v3	cucmeB364

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C025069	Wild cucumber (PI 183967)	cpimeB356
MELO3C025069	Cucumber (Chinese Long) v2	cumeB352
MELO3C025069	Cucurbita pepo (Zucchini)	cpemeB157
MELO3C025069	Cucumber (Gy14) v2	cgybmeB295
MELO3C025069	Silver-seed gourd	carmeB0821
MELO3C025069	Cucumber (Chinese Long) v3	cucmeB352
MELO3C025069	Wax gourd	mewgoB017
MELO3C025069	Cucurbita maxima (Rimu)	cmameB252
MELO3C025069	Cucurbita moschata (Rifu)	cmomeB240
MELO3C025069	Cucurbita moschata (Rifu)	cmomeB625