MELO3C024949.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C024949.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	RPM1-interacting protein 4
Location	chr01 : 10670710 .. 10673019 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTGTTTAGTAGTTGAGAGTTAAAGAATTAGGATCTATATACTTCTTTGATAGTAGTAGATATATACTTCATATTGTTAAAGGTCATGTACTAATTTGTTTTTTCTTTTATATATTTGGTTGTATAATTTCTTTAGAAGATTTTGATATCCAATAAGCCCACATTTAGCCCAATTTACAAAAGTCGCCTCTTTCTTTCTTTCTTTCTTTCTCTCTTTCAATCTGCCAGTCTTACCCATTTTTCTCTCTTTTCATTGATTTGAAATTCCAATTTTTTTCCTCCGAAACGTTCTCTCTCTAGAATTCATGACGGTATTCTTTCTCTTTTTGATTTCTGCGTCTTCAACATATTATTACTAATTTTTTTCATCTTTGATTTCTTTCTTGCTTTGATGTGTTTGTTCGATCGGTTTCATTGTTACTTCCTGCTCAATTTCCCTTTTCTTGATTCCTTCCCCCACTTTGATTGCCCTATTGATTCTTCATTTTTGTTGTTTCCCACTTTCATTTCTTTATTCCTCTTCCTGGGATTCAAGTTTATTGATTGATAGATTATATGTTGTTCTATTGGACTGGCATAAATCTGGATTTTCTACCAGATTTAGTTAGTTGTTGAAGCTCGTTTTTTTCAATCAATAAATCCCTCACCTGCATTTAAATATGGATTAACTAGTGTTGGATTGGAGAAAACTTCTTAATTGGTTTATTTTGTTTGATTGATTAATATCGGTTTTGAAGGTATTTACAAAATCTGTTGCTATAAAGCACTGTTGTGTGGTAATAGATGATGGTTTTTAGATGGTAGATTCTTAGTCCGATTAGTAAGGTAACGCATAAGATTCACAGAGTGTACATCTTGTTTATTTATTTATTTTTATTATTATTTTTTTTCTTTTCTTGCAGGACAAAGGTCGGCCATTGCCAAAATTTGGTGAGTGGGATGTTAATGATCCGACATCAGCTGAGGGTTTCACCGTGATTTTTAACAAAGCTAGAGATGAGAAGAAAACAGGCGGCAAACCTGATTCACCTGGAAAAGTTGATGCACATGGCAGGACTGCACCAGATCCTGCCAAGGCACCTCCTGTAAGATACATTCATAATCTTTTTCCTATTTGGGCGTTGGATGGTTGTTGTACCTATATTGCATTGTATCTCTGTTGATAATAATTAATGAAGTAGTTGGCATCTAAACAATGCTTCTTTTATACCTCTGGACAATTGTTTGGTCTGTTACTGTCAATGAATTTCTGAGAGTGTTGCTTCTCAGTTCTGACAGTATATTTATTGTATTCCAACTAATAGTTGCAAACGTTTAGATATTTAACAAATGAAAAGAGGAACAAACAACCTTCAAAATCTATAATTTTAAGGAAGGAAATATCACGGTAACAAGGAAACACACATGATTGGGGCCAACGTCAATATAAAGGATTTAATAGTCTGGGAGGTTGCCATCTTGCCCTTATCTGTTCTAAAAAATCTTCTTGTGTTCCTTTGGACAATTGGTTTTGTCTGTTGCTTGCTTCTGATAGTGTGATGTGAGTGTGTATAGTAAGTATAACTCCGTTGAGCTTCATTCAAAATCTTGGAAAGTATGAAACTGAAAACATGTGGATAAAGTACCTAGAATTTAGTTAGGAGGAGAGAAGATATCACACCATTTAATGTATTAACATCAGAATGTCTTTCATTTTATGACTTGTTAGGAACTTTAGATTATGAAACATGAATTTTCTAGTTTTGTTCATCTTTGAGAGGGCTATGGTTCCTCTTGCATAAATGTAGGCCTTTGAAATAAATGGTTTGATCCCGGTGCTGCATTTATTCCTTTTTCTTTACCGTATATATTGTATTTACAAGTTTTCTTTGGGCTTTTTTTCTTTCATGTGGATGAATATCAGAAGAAATGGCTTTGCTGTATCCAAAGTCCCACTGCTGAATCTTAAGAAGGTTCGTTTAGAAGCCACAGTTGAAAAACTTCATATTATTCTGTAATTGTGTCTGCTGTTGGCTTCTCAAATTCAGTGCACTTTTCATGGAGCCTTGATGGTCCTGCTAAATTTTATGCAATTTCATGTAAATCTGAGTGTTGTCTTGTTGTTGTGGAGGAAAAAAAAAAATTGTAAAGAAGAACATGTATTGTATTTATATTATTGATATGGTGGTTTTTTTATTAGGGGATAAAGTTGCTATTCTGTCTTTGCCTTTGGTGTGTGAGCTGTAAAGCTTTGCACTGGACATCGTGTATAATTGTGGCTGGTATAATTAATGTAATACAACTTTTGCTTTTCTTCCAACATACCCTT

mRNA sequence

TTTTTGTTTAGTAGTTGAGAGTTAAAGAATTAGGATCTATATACTTCTTTGATAGTAGTAGATATATACTTCATATTGTTAAAGGTCATGTACTAATTTGTTTTTTCTTTTATATATTTGGTTGTATAATTTCTTTAGAAGATTTTGATATCCAATAAGCCCACATTTAGCCCAATTTACAAAAGTCGCCTCTTTCTTTCTTTCTTTCTTTCTCTCTTTCAATCTGCCAGTCTTACCCATTTTTCTCTCTTTTCATTGATTTGAAATTCCAATTTTTTTCCTCCGAAACGTTCTCTCTCTAGAATTCATGACGGTATTTACAAAATCTGTTGCTATAAAGCACTGTTGTGTGGACAAAGGTCGGCCATTGCCAAAATTTGGTGAGTGGGATGTTAATGATCCGACATCAGCTGAGGGTTTCACCGTGATTTTTAACAAAGCTAGAGATGAGAAGAAAACAGGCGGCAAACCTGATTCACCTGGAAAAGTTGATGCACATGGCAGGACTGCACCAGATCCTGCCAAGGCACCTCCTAAGAAATGGCTTTGCTGTATCCAAAGTCCCACTGCTGAATCTTAAGAAGGTTCGTTTAGAAGCCACAGTTGAAAAACTTCATATTATTCTGTAATTGTGTCTGCTGTTGGCTTCTCAAATTCAGTGCACTTTTCATGGAGCCTTGATGGTCCTGCTAAATTTTATGCAATTTCATGTAAATCTGAGTGTTGTCTTGTTGTTGTGGAGGAAAAAAAAAAATTGTAAAGAAGAACATGTATTGTATTTATATTATTGATATGGTGGTTTTTTTATTAGGGGATAAAGTTGCTATTCTGTCTTTGCCTTTGGTGTGTGAGCTGTAAAGCTTTGCACTGGACATCGTGTATAATTGTGGCTGGTATAATTAATGTAATACAACTTTTGCTTTTCTTCCAACATACCCTT

Coding sequence (CDS)

ATGACGGTATTTACAAAATCTGTTGCTATAAAGCACTGTTGTGTGGACAAAGGTCGGCCATTGCCAAAATTTGGTGAGTGGGATGTTAATGATCCGACATCAGCTGAGGGTTTCACCGTGATTTTTAACAAAGCTAGAGATGAGAAGAAAACAGGCGGCAAACCTGATTCACCTGGAAAAGTTGATGCACATGGCAGGACTGCACCAGATCCTGCCAAGGCACCTCCTAAGAAATGGCTTTGCTGTATCCAAAGTCCCACTGCTGAATCTTAA

Protein sequence

MTVFTKSVAIKHCCVDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRTAPDPAKAPPKKWLCCIQSPTAES

Homology

[Close]

BLAST of MELO3C024949.2 vs. NCBI nr
Match: XP_008463015.1 (PREDICTED: RPM1-interacting protein 4-like isoform X2 [Cucumis melo])

HSP 1 Score: 163.7 bits (413), Expect = 2.9e-37
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0


Query: 16 DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRTAPDPAKAP 75
          DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRTAPDPAKAP
Sbjct: 3  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRTAPDPAKAP 62

Query: 76 PKKWLCCIQSPTAES 91
          PKKWLCCIQSPTAES
Sbjct: 63 PKKWLCCIQSPTAES 77

[Close]

BLAST of MELO3C024949.2 vs. NCBI nr
Match: XP_004148923.1 (PREDICTED: RPM1-interacting protein 4-like [Cucumis sativus])

HSP 1 Score: 160.2 bits (404), Expect = 3.2e-36
Identity = 73/75 (97.33%), Postives = 73/75 (97.33%), Query Frame = 0


Query: 16 DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRTAPDPAKAP 75
          DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGR APDPAK P
Sbjct: 3  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTP 62

Query: 76 PKKWLCCIQSPTAES 91
          PKKWLCCIQSPTAES
Sbjct: 63 PKKWLCCIQSPTAES 77

[Close]

BLAST of MELO3C024949.2 vs. NCBI nr
Match: XP_022936748.1 (uncharacterized protein LOC111443250 [Cucurbita moschata] >XP_022975427.1 uncharacterized protein LOC111474733 isoform X2 [Cucurbita maxima] >XP_023535778.1 uncharacterized protein LOC111797108 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 152.1 bits (383), Expect = 8.8e-34
Identity = 70/75 (93.33%), Postives = 71/75 (94.67%), Query Frame = 0


Query: 16 DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRTAPDPAKAP 75
          DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDA GR+  DPAKAP
Sbjct: 3  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAKAP 62

Query: 76 PKKWLCCIQSPTAES 91
          PKKWLCCIQSP AES
Sbjct: 63 PKKWLCCIQSPPAES 77

[Close]

BLAST of MELO3C024949.2 vs. NCBI nr
Match: XP_022139562.1 (RPM1-interacting protein 4 [Momordica charantia])

HSP 1 Score: 150.2 bits (378), Expect = 3.3e-33
Identity = 69/75 (92.00%), Postives = 70/75 (93.33%), Query Frame = 0


Query: 16 DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRTAPDPAKAP 75
          DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDA GR   DP+KAP
Sbjct: 3  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDARGRPGADPSKAP 62

Query: 76 PKKWLCCIQSPTAES 91
          PKKWLCCIQSP AES
Sbjct: 63 PKKWLCCIQSPPAES 77

[Close]

BLAST of MELO3C024949.2 vs. NCBI nr
Match: XP_022941007.1 (RPM1-interacting protein 4-like [Cucurbita moschata] >XP_022981664.1 RPM1-interacting protein 4-like [Cucurbita maxima] >XP_023525056.1 RPM1-interacting protein 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 149.4 bits (376), Expect = 5.7e-33
Identity = 69/75 (92.00%), Postives = 70/75 (93.33%), Query Frame = 0


Query: 16 DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRTAPDPAKAP 75
          DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDA GR   +PAKAP
Sbjct: 3  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPGANPAKAP 62

Query: 76 PKKWLCCIQSPTAES 91
          PKKWLCCIQSP AES
Sbjct: 63 PKKWLCCIQSPPAES 77

[Close]

BLAST of MELO3C024949.2 vs. TAIR10
Match: AT2G04410.1 (RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 104.4 bits (259), Expect = 3.8e-23
Identity = 48/70 (68.57%), Postives = 55/70 (78.57%), Query Frame = 0


Query: 16 DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRTAPDPAKAP 75
          DKGRPLPKFGEWDVNDP+SAEGFTVIFNKAR+EKK GGK DSPGK +       +  + P
Sbjct: 3  DKGRPLPKFGEWDVNDPSSAEGFTVIFNKARNEKKGGGKSDSPGKDEPGYNKNGEVLEKP 62

Query: 76 PKKWLCCIQS 86
           KKW CCI++
Sbjct: 63 AKKWFCCIRA 72

[Close]

BLAST of MELO3C024949.2 vs. TAIR10
Match: AT5G55850.2 (RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 97.8 bits (242), Expect = 3.6e-21
Identity = 49/75 (65.33%), Postives = 58/75 (77.33%), Query Frame = 0


Query: 16 DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGK-VDAHGRT-APDPAK 75
          DKGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGGKP SPGK  + H ++   DP+K
Sbjct: 19 DKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKSSEGHVKSGGGDPSK 78

Query: 76 APPKKWLCCIQSPTA 89
            P K +  + + ++
Sbjct: 79 PQPVKKMALLHASSS 93

[Close]

BLAST of MELO3C024949.2 vs. TAIR10
Match: AT5G40645.1 (RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 73.2 bits (178), Expect = 9.4e-14
Identity = 37/64 (57.81%), Postives = 42/64 (65.62%), Query Frame = 0


Query: 19 RPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRTAPDPAKAPPKK 78
          RPLPKFGEWDVNDP SAEGFTVIF KARD+KKT    ++ G+  +  R        P KK
Sbjct: 13 RPLPKFGEWDVNDPASAEGFTVIFAKARDDKKT----NASGRAASQRRDNNKSQDEPTKK 72

Query: 79 WLCC 83
            CC
Sbjct: 73 RFCC 72

[Close]

BLAST of MELO3C024949.2 vs. TAIR10
Match: AT4G35655.1 (RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 71.2 bits (173), Expect = 3.6e-13
Identity = 37/63 (58.73%), Postives = 42/63 (66.67%), Query Frame = 0


Query: 19 RPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRTAPDPAKAPPKK 78
          RPLPKFGEWDVNDP +AEGFTVIF+KA ++KKTG          A  +   D  K P KK
Sbjct: 8  RPLPKFGEWDVNDPATAEGFTVIFSKAGEDKKTGRSSSK-----APSQRKQDGVK-PTKK 64

Query: 79 WLC 82
          WLC
Sbjct: 68 WLC 64

[Close]

BLAST of MELO3C024949.2 vs. TAIR10
Match: AT2G17660.1 (RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 69.7 bits (169), Expect = 1.0e-12
Identity = 34/66 (51.52%), Postives = 42/66 (63.64%), Query Frame = 0


Query: 16 DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRTAPDPAKAP 75
          + GR LPKFGEWDVNDP +A+GFTVIF+KA ++KKTG           + +   D  K  
Sbjct: 5  EAGRALPKFGEWDVNDPATADGFTVIFSKAGEDKKTG-----RSSTKTNSQRKQDGDKPA 64

Query: 76 PKKWLC 82
           KKWLC
Sbjct: 65 VKKWLC 65

[Close]

BLAST of MELO3C024949.2 vs. Swiss-Prot
Match: sp|O22633|NOI4_ARATH (Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.2e-26
Identity = 57/77 (74.03%), Postives = 64/77 (83.12%), Query Frame = 0


Query: 16 DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGK-VDAHGRT-APDPAK 75
          DKGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGGKP SPGK  + H ++   DP+K
Sbjct: 3  DKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKSSEGHVKSGGGDPSK 62

Query: 76 APPKKWLCCIQSPTAES 91
            PKKWLCC+Q+P  +S
Sbjct: 63 PQPKKWLCCMQAPAVDS 79

[Close]

BLAST of MELO3C024949.2 vs. Swiss-Prot
Match: sp|Q8GYN5|RIN4_ARATH (RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 3.1e-06
Identity = 24/67 (35.82%), Postives = 37/67 (55.22%), Query Frame = 0


Query: 16  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRTAPDPAKAP 75
           +K   +PKFG+WD N+P+SA+G+T IFNK R+E+ +G       +   H       ++ P
Sbjct: 143 EKVTVVPKFGDWDENNPSSADGYTHIFNKVREERSSGANVSGSSRTPTH-----QSSRNP 202

Query: 76  PKKWLCC 83
                CC
Sbjct: 203 NNTSSCC 204

[Close]

BLAST of MELO3C024949.2 vs. TrEMBL
Match: tr|A0A1S3CI91|A0A1S3CI91_CUCME (RPM1-interacting protein 4-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501257 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.9e-37
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0


Query: 16 DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRTAPDPAKAP 75
          DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRTAPDPAKAP
Sbjct: 3  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRTAPDPAKAP 62

Query: 76 PKKWLCCIQSPTAES 91
          PKKWLCCIQSPTAES
Sbjct: 63 PKKWLCCIQSPTAES 77

[Close]

BLAST of MELO3C024949.2 vs. TrEMBL
Match: tr|A0A2P5W3Y5|A0A2P5W3Y5_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA34903 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 8.7e-30
Identity = 61/75 (81.33%), Postives = 66/75 (88.00%), Query Frame = 0


Query: 16 DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRTAPDPAKAP 75
          DKGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGGKP+SP K DAHG+  PDP+K  
Sbjct: 4  DKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPESPAKADAHGKPGPDPSKPQ 63

Query: 76 PKKWLCCIQSPTAES 91
           KKWLCC+Q+P AES
Sbjct: 64 SKKWLCCVQAPPAES 78

[Close]

BLAST of MELO3C024949.2 vs. TrEMBL
Match: tr|A0A0B0PEC9|A0A0B0PEC9_GOSAR (RPM1-interacting 4-like protein OS=Gossypium arboreum OX=29729 GN=F383_07102 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 4.3e-29
Identity = 60/75 (80.00%), Postives = 65/75 (86.67%), Query Frame = 0


Query: 16 DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRTAPDPAKAP 75
          DKGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGGKP+SP K DAH +  PDP+K  
Sbjct: 4  DKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPESPAKADAHSKPGPDPSKPQ 63

Query: 76 PKKWLCCIQSPTAES 91
           KKWLCC+Q+P AES
Sbjct: 64 SKKWLCCVQAPPAES 78

[Close]

BLAST of MELO3C024949.2 vs. TrEMBL
Match: tr|A0A1U8LUV7|A0A1U8LUV7_GOSHI (RPM1-interacting protein 4-like OS=Gossypium hirsutum OX=3635 GN=LOC107931082 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 4.3e-29
Identity = 60/75 (80.00%), Postives = 65/75 (86.67%), Query Frame = 0


Query: 16 DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRTAPDPAKAP 75
          DKGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTG KP+SP K DAHG+  PDP+K  
Sbjct: 4  DKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGSKPESPAKADAHGKPGPDPSKPQ 63

Query: 76 PKKWLCCIQSPTAES 91
           KKWLCC+Q+P AES
Sbjct: 64 SKKWLCCVQAPPAES 78

[Close]

BLAST of MELO3C024949.2 vs. TrEMBL
Match: tr|A0A1U8J3F9|A0A1U8J3F9_GOSHI (RPM1-interacting protein 4-like OS=Gossypium hirsutum OX=3635 GN=LOC107903385 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 7.3e-29
Identity = 60/75 (80.00%), Postives = 65/75 (86.67%), Query Frame = 0


Query: 16 DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRTAPDPAKAP 75
          DKGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGGKP+SP K DAHG+   DP+K  
Sbjct: 4  DKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPESPAKADAHGKPGADPSKPQ 63

Query: 76 PKKWLCCIQSPTAES 91
           KKWLCC+Q+P AES
Sbjct: 64 SKKWLCCVQAPPAES 78

The following BLAST results are available for this feature:

BLAST of MELO3C024949.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008463015.1	2.9e-37	100.00	PREDICTED: RPM1-interacting protein 4-like isoform X2 [Cucumis melo]	[more]
XP_004148923.1	3.2e-36	97.33	PREDICTED: RPM1-interacting protein 4-like [Cucumis sativus]	[more]
XP_022936748.1	8.8e-34	93.33	uncharacterized protein LOC111443250 [Cucurbita moschata] >XP_022975427.1 unchar...	[more]
XP_022139562.1	3.3e-33	92.00	RPM1-interacting protein 4 [Momordica charantia]	[more]
XP_022941007.1	5.7e-33	92.00	RPM1-interacting protein 4-like [Cucurbita moschata] >XP_022981664.1 RPM1-intera...	[more]

BLAST of MELO3C024949.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G04410.1	3.8e-23	68.57	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G55850.2	3.6e-21	65.33	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G40645.1	9.4e-14	57.81	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT4G35655.1	3.6e-13	58.73	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT2G17660.1	1.0e-12	51.52	RPM1-interacting protein 4 (RIN4) family protein	[more]

BLAST of MELO3C024949.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O22633\|NOI4_ARATH	1.2e-26	74.03	Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1	[more]
sp\|Q8GYN5\|RIN4_ARATH	3.1e-06	35.82	RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1	[more]

BLAST of MELO3C024949.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CI91\|A0A1S3CI91_CUCME	1.9e-37	100.00	RPM1-interacting protein 4-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC1035012...	[more]
tr\|A0A2P5W3Y5\|A0A2P5W3Y5_GOSBA	8.7e-30	81.33	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA34903 PE=4 SV...	[more]
tr\|A0A0B0PEC9\|A0A0B0PEC9_GOSAR	4.3e-29	80.00	RPM1-interacting 4-like protein OS=Gossypium arboreum OX=29729 GN=F383_07102 PE=...	[more]
tr\|A0A1U8LUV7\|A0A1U8LUV7_GOSHI	4.3e-29	80.00	RPM1-interacting protein 4-like OS=Gossypium hirsutum OX=3635 GN=LOC107931082 PE...	[more]
tr\|A0A1U8J3F9\|A0A1U8J3F9_GOSHI	7.3e-29	80.00	RPM1-interacting protein 4-like OS=Gossypium hirsutum OX=3635 GN=LOC107903385 PE...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008700	TypeIII_avirulence_cleave

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006810	transport
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C024949.2.1	MELO3C024949.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008700	RIN4, pathogenic type III effector avirulence factor Avr cleavage site	PFAM	PF05627	AvrRpt-cleavage	coord: 16..51 e-value: 1.1E-21 score: 75.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..79
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..67
None	No IPR available	PANTHER	PTHR33159:SF2	RPM1-INTERACTING PROTEIN 4 RIN4 FAMILY PROTEIN	coord: 12..90
None	No IPR available	PANTHER	PTHR33159	FAMILY NOT NAMED	coord: 12..90

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C024949.2	Csa7G127370	Cucumber (Chinese Long) v2	cumedB517
MELO3C024949.2	CSPI07G08380	Wild cucumber (PI 183967)	cpimedB533
MELO3C024949.2	CmaCh09G010160	Cucurbita maxima (Rimu)	cmamedB019
MELO3C024949.2	CmoCh09G010190	Cucurbita moschata (Rifu)	cmomedB007
MELO3C024949.2	CmoCh01G011130	Cucurbita moschata (Rifu)	cmomedB443
MELO3C024949.2	Lsi02G018190	Bottle gourd (USVL1VR-Ls)	lsimedB196
MELO3C024949.2	Cp4.1LG06g08430	Cucurbita pepo (Zucchini)	cpemedB847
MELO3C024949.2	Cp4.1LG02g00550	Cucurbita pepo (Zucchini)	cpemedB595
MELO3C024949.2	CsGy7G007880	Cucumber (Gy14) v2	cgybmedB476
MELO3C024949.2	Cla003318	Watermelon (97103) v1	medwmB197
MELO3C024949.2	ClCG09G021410	Watermelon (Charleston Gray)	medwcgB172
MELO3C024949.2	Cla97C09G182810	Watermelon (97103) v2	medwmbB211
MELO3C024949.2	Bhi09G001488	Wax gourd	medwgoB256
MELO3C024949.2	Carg12880	Silver-seed gourd	carmedB0897
MELO3C024949.2	Carg22417	Silver-seed gourd	carmedB0880
MELO3C024949.2	CsaV3_7G011460	Cucumber (Chinese Long) v3	cucmedB546

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C024949.2	Cucurbita maxima (Rimu)	cmamedB455