Cla97C09G182810 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C09G182810
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	RPM1-interacting protein 4-like
Location	Cla97Chr09 : 36089333 .. 36090984 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGGTATGCTTCTCTTGATTTCTGCGTCTTATTAAGCATGTTATTACAATTTTGTTATTCATCTTTGATTCTTTGTTTTGATGTGTTGTTCGATCGGTTTGATTACTACTTTCTGCTGAATTTCCGTTTTCTTGATTCGATTCGCCACTTTGATTTCTTTATTCATTTGATTTCGCTAAGGATTGGTCAATTCTTCGCTTCTATGATTCCCACTTTGATGTGTTTATTCGTCTTCCTGAGATTCAAGTTGATAGATAGATTCTGTGCTTGTTATATTGGAGGGGCAGAAATCTGGATTTTCCTCGAGATTTAATTAGTTGTTGTAGGTCGTTTCTGAATCAGTAAATCCGTTTCTTGCAGTCCAATATGAGATGTATTTGGATTAACTGGTGTTGGAGGAAACTTCTTAATTGGTTTATTTTGTTTTGTTTGATTAATATCGGATTGAAGGTATTTACAAAATCTGTTGCCATTAAGGGTTAAGCAATGTTGTATGGTAATAGATGCTGGTTGTTGGATTCATAGTCATCAGATTCATAGAGGGTACATCGTGTTTGTTCTCTCATTTTGCAGGACAAAGGTCGGCCACTGCCAAAATTTGGTGAGTGGGATGTTAATGATCCGACATCAGCTGAGGGTTTTACCGTGATTTTTAACAAAGCTAGAGATGAGAAGAAAACAGGCGGCAAACCTGATTCACCTGGAAAAGTTGATGCACATGGCAGGCCTGCAGCAGATCCTGCCAAGGCACCGCCTGTAAGATACATTCATAATCCTTTTTCTATTTGGACGTTGGATGGTTGTTGTAGCTAGCGTATCTGTTGATAATAAAGTAGTTGGCATCTAAAGAATGCTTCTTTTACACCTCTGGACAATTGTTAGTCAATGTATTTCTGAGAGTGTTGCTTCTGATAGTATGTTTATTGTATTTCAACCAGTAGTTGCAAGCTTTTGGAGATTCATGAAATGAAAATGGGATCAATATGTAACTATAGAAACCAAATCTTCAAAATCTATAATTTTAAGAAGGAAAGATCAATGTAACAATTAAAGTAGAAATGAAAATGAAATACAAGTGGATAGGGCCAATATAAAGGATTTAATGGTCAGGGAGGTTCGCGTCATGCCCTTACCTGTTCTAAGGAGTGCTTCTTTTGCTCCTCTGGACAATTGTTTGGTCTGTTGCTTCTGATAGTGTGTGTATTTATGTACGTGTATCTGCGTTGAGCGTTGTTCAAAATCTTGGGAAGTATCCTAAATTGAAAGTGAAACATGTTGGTAAGGTACCTAGAATTTAGAGGACAGATGATATCACACCATTTAATGTATAAAATCAGAATCTCTTTGATTTTATAAGCCTTGTTAGGAGCTTTATGTTCATGAAACATGAATTTCCTAGCTTTGTACTTTGAGAGGGCTCTGGTTCTTCTTGCATAAATGTAGGCCTTGAATGAAATGATTTTATCTTTGTGCTGCATCTACTCCTTTGAATGAAATGATTTTATCTATGTTACCGTAGAAAATAAATAATCTGCAGTTTTACCTTACATATTGTATTTACAAGTTTTCTCTGGTCATTTTTCTTTCATGTGGATGATTATCAGAAGAAATGGCTTTGCTGTATCCAAAGTCCCCCTGCTGAATCTTGA

mRNA sequence

ATGACGGACAAAGGTCGGCCACTGCCAAAATTTGGTGAGTGGGATGTTAATGATCCGACATCAGCTGAGGGTTTTACCGTGATTTTTAACAAAGCTAGAGATGAGAAGAAAACAGGCGGCAAACCTGATTCACCTGGAAAAGTTGATGCACATGGCAGGCCTGCAGCAGATCCTGCCAAGGCACCGCCTAAGAAATGGCTTTGCTGTATCCAAAGTCCCCCTGCTGAATCTTGA

Coding sequence (CDS)

ATGACGGACAAAGGTCGGCCACTGCCAAAATTTGGTGAGTGGGATGTTAATGATCCGACATCAGCTGAGGGTTTTACCGTGATTTTTAACAAAGCTAGAGATGAGAAGAAAACAGGCGGCAAACCTGATTCACCTGGAAAAGTTGATGCACATGGCAGGCCTGCAGCAGATCCTGCCAAGGCACCGCCTAAGAAATGGCTTTGCTGTATCCAAAGTCCCCCTGCTGAATCTTGA

Protein sequence

MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRPAADPAKAPPKKWLCCIQSPPAES

Homology

[Close]

BLAST of Cla97C09G182810 vs. NCBI nr
Match: XP_022139562.1 (RPM1-interacting protein 4 [Momordica charantia])

HSP 1 Score: 160.6 bits (405), Expect = 2.1e-36
Identity = 74/77 (96.10%), Postives = 75/77 (97.40%), Query Frame = 0


Query: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRPAADPAK 60
          MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDA GRP ADP+K
Sbjct: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDARGRPGADPSK 60

Query: 61 APPKKWLCCIQSPPAES 78
          APPKKWLCCIQSPPAES
Sbjct: 61 APPKKWLCCIQSPPAES 77

[Close]

BLAST of Cla97C09G182810 vs. NCBI nr
Match: XP_022936748.1 (uncharacterized protein LOC111443250 [Cucurbita moschata] >XP_022975427.1 uncharacterized protein LOC111474733 isoform X2 [Cucurbita maxima] >XP_023535778.1 uncharacterized protein LOC111797108 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 158.7 bits (400), Expect = 8.0e-36
Identity = 74/77 (96.10%), Postives = 74/77 (96.10%), Query Frame = 0


Query: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRPAADPAK 60
          MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDA GR  ADPAK
Sbjct: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAK 60

Query: 61 APPKKWLCCIQSPPAES 78
          APPKKWLCCIQSPPAES
Sbjct: 61 APPKKWLCCIQSPPAES 77

[Close]

BLAST of Cla97C09G182810 vs. NCBI nr
Match: XP_008463015.1 (PREDICTED: RPM1-interacting protein 4-like isoform X2 [Cucumis melo])

HSP 1 Score: 158.3 bits (399), Expect = 1.0e-35
Identity = 74/77 (96.10%), Postives = 74/77 (96.10%), Query Frame = 0


Query: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRPAADPAK 60
          MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGR A DPAK
Sbjct: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRTAPDPAK 60

Query: 61 APPKKWLCCIQSPPAES 78
          APPKKWLCCIQSP AES
Sbjct: 61 APPKKWLCCIQSPTAES 77

[Close]

BLAST of Cla97C09G182810 vs. NCBI nr
Match: XP_022941007.1 (RPM1-interacting protein 4-like [Cucurbita moschata] >XP_022981664.1 RPM1-interacting protein 4-like [Cucurbita maxima] >XP_023525056.1 RPM1-interacting protein 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 157.9 bits (398), Expect = 1.4e-35
Identity = 73/77 (94.81%), Postives = 74/77 (96.10%), Query Frame = 0


Query: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRPAADPAK 60
          M DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDA GRP A+PAK
Sbjct: 1  MADKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPGANPAK 60

Query: 61 APPKKWLCCIQSPPAES 78
          APPKKWLCCIQSPPAES
Sbjct: 61 APPKKWLCCIQSPPAES 77

[Close]

BLAST of Cla97C09G182810 vs. NCBI nr
Match: XP_004148923.1 (PREDICTED: RPM1-interacting protein 4-like [Cucumis sativus])

HSP 1 Score: 156.4 bits (394), Expect = 4.0e-35
Identity = 73/77 (94.81%), Postives = 73/77 (94.81%), Query Frame = 0


Query: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRPAADPAK 60
          MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGR A DPAK
Sbjct: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAK 60

Query: 61 APPKKWLCCIQSPPAES 78
           PPKKWLCCIQSP AES
Sbjct: 61 TPPKKWLCCIQSPTAES 77

[Close]

BLAST of Cla97C09G182810 vs. TrEMBL
Match: tr|A0A1S3CI91|A0A1S3CI91_CUCME (RPM1-interacting protein 4-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501257 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 6.9e-36
Identity = 74/77 (96.10%), Postives = 74/77 (96.10%), Query Frame = 0


Query: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRPAADPAK 60
          MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGR A DPAK
Sbjct: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRTAPDPAK 60

Query: 61 APPKKWLCCIQSPPAES 78
          APPKKWLCCIQSP AES
Sbjct: 61 APPKKWLCCIQSPTAES 77

[Close]

BLAST of Cla97C09G182810 vs. TrEMBL
Match: tr|A0A1U8J3F9|A0A1U8J3F9_GOSHI (RPM1-interacting protein 4-like OS=Gossypium hirsutum OX=3635 GN=LOC107903385 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 8.8e-31
Identity = 63/75 (84.00%), Postives = 68/75 (90.67%), Query Frame = 0


Query: 3  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRPAADPAKAP 62
          DKGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGGKP+SP K DAHG+P ADP+K  
Sbjct: 4  DKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPESPAKADAHGKPGADPSKPQ 63

Query: 63 PKKWLCCIQSPPAES 78
           KKWLCC+Q+PPAES
Sbjct: 64 SKKWLCCVQAPPAES 78

[Close]

BLAST of Cla97C09G182810 vs. TrEMBL
Match: tr|A0A0D2U289|A0A0D2U289_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_009G451800 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 8.8e-31
Identity = 63/75 (84.00%), Postives = 68/75 (90.67%), Query Frame = 0


Query: 3  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRPAADPAKAP 62
          DKGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGGKP+SP K DAHG+P ADP+K  
Sbjct: 4  DKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPESPAKADAHGKPGADPSKPQ 63

Query: 63 PKKWLCCIQSPPAES 78
           KKWLCC+Q+PPAES
Sbjct: 64 SKKWLCCVQAPPAES 78

[Close]

BLAST of Cla97C09G182810 vs. TrEMBL
Match: tr|A0A2P5SCJ6|A0A2P5SCJ6_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD06183 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 8.8e-31
Identity = 63/75 (84.00%), Postives = 68/75 (90.67%), Query Frame = 0


Query: 3  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRPAADPAKAP 62
          DKGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGGKP+SP K DAHG+P ADP+K  
Sbjct: 4  DKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPESPAKADAHGKPGADPSKPQ 63

Query: 63 PKKWLCCIQSPPAES 78
           KKWLCC+Q+PPAES
Sbjct: 64 SKKWLCCVQAPPAES 78

[Close]

BLAST of Cla97C09G182810 vs. TrEMBL
Match: tr|A0A2P5W3Y5|A0A2P5W3Y5_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA34903 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 3.3e-30
Identity = 62/75 (82.67%), Postives = 67/75 (89.33%), Query Frame = 0


Query: 3  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRPAADPAKAP 62
          DKGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGGKP+SP K DAHG+P  DP+K  
Sbjct: 4  DKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPESPAKADAHGKPGPDPSKPQ 63

Query: 63 PKKWLCCIQSPPAES 78
           KKWLCC+Q+PPAES
Sbjct: 64 SKKWLCCVQAPPAES 78

[Close]

BLAST of Cla97C09G182810 vs. Swiss-Prot
Match: sp|O22633|NOI4_ARATH (Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 7.9e-27
Identity = 58/79 (73.42%), Postives = 65/79 (82.28%), Query Frame = 0


Query: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGK-VDAHGRP-AADP 60
          M+DKGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGGKP SPGK  + H +    DP
Sbjct: 1  MSDKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKSSEGHVKSGGGDP 60

Query: 61 AKAPPKKWLCCIQSPPAES 78
          +K  PKKWLCC+Q+P  +S
Sbjct: 61 SKPQPKKWLCCMQAPAVDS 79

[Close]

BLAST of Cla97C09G182810 vs. Swiss-Prot
Match: sp|Q8GYN5|RIN4_ARATH (RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 5.9e-06
Identity = 24/67 (35.82%), Postives = 37/67 (55.22%), Query Frame = 0


Query: 3   DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRPAADPAKAP 62
           +K   +PKFG+WD N+P+SA+G+T IFNK R+E+ +G       +   H       ++ P
Sbjct: 143 EKVTVVPKFGDWDENNPSSADGYTHIFNKVREERSSGANVSGSSRTPTH-----QSSRNP 202

Query: 63  PKKWLCC 70
                CC
Sbjct: 203 NNTSSCC 204

[Close]

BLAST of Cla97C09G182810 vs. TAIR10
Match: AT2G04410.1 (RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 105.9 bits (263), Expect = 1.1e-23
Identity = 49/72 (68.06%), Postives = 56/72 (77.78%), Query Frame = 0


Query: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRPAADPAK 60
          M DKGRPLPKFGEWDVNDP+SAEGFTVIFNKAR+EKK GGK DSPGK +       +  +
Sbjct: 1  MADKGRPLPKFGEWDVNDPSSAEGFTVIFNKARNEKKGGGKSDSPGKDEPGYNKNGEVLE 60

Query: 61 APPKKWLCCIQS 73
           P KKW CCI++
Sbjct: 61 KPAKKWFCCIRA 72

[Close]

BLAST of Cla97C09G182810 vs. TAIR10
Match: AT5G55850.2 (RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 96.7 bits (239), Expect = 6.8e-21
Identity = 49/72 (68.06%), Postives = 55/72 (76.39%), Query Frame = 0


Query: 3  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGK-VDAHGRP-AADPAK 62
          DKGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGGKP SPGK  + H +    DP+K
Sbjct: 19 DKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKSSEGHVKSGGGDPSK 78

Query: 63 APPKKWLCCIQS 73
            P K +  + +
Sbjct: 79 PQPVKKMALLHA 90

[Close]

BLAST of Cla97C09G182810 vs. TAIR10
Match: AT5G40645.1 (RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 72.4 bits (176), Expect = 1.4e-13
Identity = 37/64 (57.81%), Postives = 42/64 (65.62%), Query Frame = 0


Query: 6  RPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRPAADPAKAPPKK 65
          RPLPKFGEWDVNDP SAEGFTVIF KARD+KKT    ++ G+  +  R        P KK
Sbjct: 13 RPLPKFGEWDVNDPASAEGFTVIFAKARDDKKT----NASGRAASQRRDNNKSQDEPTKK 72

Query: 66 WLCC 70
            CC
Sbjct: 73 RFCC 72

[Close]

BLAST of Cla97C09G182810 vs. TAIR10
Match: AT4G35655.1 (RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 70.1 bits (170), Expect = 6.8e-13
Identity = 37/63 (58.73%), Postives = 42/63 (66.67%), Query Frame = 0


Query: 6  RPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRPAADPAKAPPKK 65
          RPLPKFGEWDVNDP +AEGFTVIF+KA ++KKTG          A  +   D  K P KK
Sbjct: 8  RPLPKFGEWDVNDPATAEGFTVIFSKAGEDKKTGRSSSK-----APSQRKQDGVK-PTKK 64

Query: 66 WLC 69
          WLC
Sbjct: 68 WLC 64

[Close]

BLAST of Cla97C09G182810 vs. TAIR10
Match: AT2G17660.1 (RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 68.9 bits (167), Expect = 1.5e-12
Identity = 36/66 (54.55%), Postives = 45/66 (68.18%), Query Frame = 0


Query: 3  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRPAADPAKAP 62
          + GR LPKFGEWDVNDP +A+GFTVIF+KA ++KKTG    S  K ++  +   D  K  
Sbjct: 5  EAGRALPKFGEWDVNDPATADGFTVIFSKAGEDKKTG---RSSTKTNSQRKQDGD--KPA 64

Query: 63 PKKWLC 69
           KKWLC
Sbjct: 65 VKKWLC 65

The following BLAST results are available for this feature:

BLAST of Cla97C09G182810 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139562.1	2.1e-36	96.10	RPM1-interacting protein 4 [Momordica charantia]	[more]
XP_022936748.1	8.0e-36	96.10	uncharacterized protein LOC111443250 [Cucurbita moschata] >XP_022975427.1 unchar...	[more]
XP_008463015.1	1.0e-35	96.10	PREDICTED: RPM1-interacting protein 4-like isoform X2 [Cucumis melo]	[more]
XP_022941007.1	1.4e-35	94.81	RPM1-interacting protein 4-like [Cucurbita moschata] >XP_022981664.1 RPM1-intera...	[more]
XP_004148923.1	4.0e-35	94.81	PREDICTED: RPM1-interacting protein 4-like [Cucumis sativus]	[more]

BLAST of Cla97C09G182810 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CI91\|A0A1S3CI91_CUCME	6.9e-36	96.10	RPM1-interacting protein 4-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC1035012...	[more]
tr\|A0A1U8J3F9\|A0A1U8J3F9_GOSHI	8.8e-31	84.00	RPM1-interacting protein 4-like OS=Gossypium hirsutum OX=3635 GN=LOC107903385 PE...	[more]
tr\|A0A0D2U289\|A0A0D2U289_GOSRA	8.8e-31	84.00	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_009G451800 PE=4 ...	[more]
tr\|A0A2P5SCJ6\|A0A2P5SCJ6_GOSBA	8.8e-31	84.00	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD06183 PE=4 SV...	[more]
tr\|A0A2P5W3Y5\|A0A2P5W3Y5_GOSBA	3.3e-30	82.67	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA34903 PE=4 SV...	[more]

BLAST of Cla97C09G182810 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O22633\|NOI4_ARATH	7.9e-27	73.42	Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1	[more]
sp\|Q8GYN5\|RIN4_ARATH	5.9e-06	35.82	RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1	[more]

BLAST of Cla97C09G182810 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G04410.1	1.1e-23	68.06	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G55850.2	6.8e-21	68.06	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G40645.1	1.4e-13	57.81	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT4G35655.1	6.8e-13	58.73	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT2G17660.1	1.5e-12	54.55	RPM1-interacting protein 4 (RIN4) family protein	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008700	TypeIII_avirulence_cleave

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006810	transport
biological_process	GO:0008150	biological_process
biological_process	GO:0010204	defense response signaling pathway, resistance gene-independent
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0044464	cell part
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016020	membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C09G182810.1	Cla97C09G182810.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008700	RIN4, pathogenic type III effector avirulence factor Avr cleavage site	PFAM	PF05627	AvrRpt-cleavage	coord: 3..38 e-value: 6.8E-22 score: 76.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..66
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..54
None	No IPR available	PANTHER	PTHR33159:SF2	RPM1-INTERACTING PROTEIN 4 RIN4 FAMILY PROTEIN	coord: 1..77
None	No IPR available	PANTHER	PTHR33159	FAMILY NOT NAMED	coord: 1..77

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C09G182810	Cla003318	Watermelon (97103) v1	wmwmbB042
Cla97C09G182810	Csa7G127370	Cucumber (Chinese Long) v2	cuwmbB563
Cla97C09G182810	MELO3C024949	Melon (DHL92) v3.5.1	mewmbB210
Cla97C09G182810	ClCG09G021410	Watermelon (Charleston Gray)	wcgwmbB035
Cla97C09G182810	CSPI07G08380	Wild cucumber (PI 183967)	cpiwmbB591
Cla97C09G182810	CmaCh09G010160	Cucurbita maxima (Rimu)	cmawmbB048
Cla97C09G182810	CmoCh09G010190	Cucurbita moschata (Rifu)	cmowmbB035
Cla97C09G182810	CmoCh01G011130	Cucurbita moschata (Rifu)	cmowmbB497
Cla97C09G182810	Lsi02G018190	Bottle gourd (USVL1VR-Ls)	lsiwmbB214
Cla97C09G182810	CsGy7G007880	Cucumber (Gy14) v2	cgybwmbB537
Cla97C09G182810	MELO3C024949.2	Melon (DHL92) v3.6.1	medwmbB211
Cla97C09G182810	Carg22417	Silver-seed gourd	carwmbB0922
Cla97C09G182810	Carg12880	Silver-seed gourd	carwmbB0949
Cla97C09G182810	CsaV3_7G011460	Cucumber (Chinese Long) v3	cucwmbB588
Cla97C09G182810	Bhi09G001488	Wax gourd	wgowmbB609

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C09G182810	Cucumber (Gy14) v2	cgybwmbB548
Cla97C09G182810	Cucurbita maxima (Rimu)	cmawmbB514