CsGy7G007880 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy7G007880
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	RPM1-interacting protein 4-like
Location	Chr7 : 6055087 .. 6057377 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAGTTTTAAAAGTCTAAAGATTAAGTTAATACAAAGTAAAGTAGAGGTGTTGTATAGTGATACATTTTGTTTACGGTTAAATTGAGTTTAGGTGGACATATGTATATGTATACACAATTGATGTAACCAAATATATATTATATATATGGTTATATAATTTCTCAAGAGGATTTTGGTATCCAATAAGCCCACATTTAGCCCATTTTACAAAAGTCGTCTTTCTTTCTCTCTTTCAATCTCCCACTCTTATTTTTCTCTCATTTCATTCATTTGAAATTCCATTTTTTTTTCCTCCGAAACCTTCTCTCTCTAGAATTCATGACGGTATGCTTTCTCTTTCATTTCTGCCTCTTCAACATATTATTACAATTTTTATTTTTTCTTCTTCGCTTTCTTGCTTTGATGTGTTTTTTCGATCGGTTTCATTATTACTTCCTTCTCAATTTCCCTTTTCTTGATTCCTTCCCCCACTTTGATTTCCCTATTGATTCTTCAATTCTTTTGTTTCCCACTTTCATTTCTTTATTCCTCTTCCTGGGATTCAAGTTTATCGATTGATAGATTCTATGCTTGTTCTATTGGACCCCCATAAATCTGGATTTTCTACCAGATTTATTTAGTTGTTGGAGCTCGTTTTTCAATCAATAAATCTCTCACCTGCATTTAAATACGGATTTAACTAGTGTTGGATTGGAGGAAAAAACCTCTTGATTGTTTTATTTTGTTTGATTGATTAGTATCGGTTTTGGAGGTATTTACAAAATCTGTTGCTATAAAGCACGTTGTGTGGTAATAGATGATGGTTTTTAGATGGTAGATTCTTTGTCCGATTAGTAAGGTAACGCATAAGATTCACAGAGGGTACATCTTGTTTATTTATTACTTTTTTTTCCCCTCTTCTTGTAGGACAAAGGTCGGCCATTGCCAAAATTTGGTGAGTGGGATGTTAATGATCCGACATCGGCTGAGGGTTTCACTGTGATTTTCAACAAAGCTAGAGATGAGAAGAAAACAGGCGGCAAACCTGATTCACCTGGAAAAGTTGATGCACATGGCAGGAATGCACCAGATCCTGCCAAGACACCTCCTGTAAGATACATTCATAATCTTTTTCCTACTTGGGCGTTGGATGGTTGTTGTAGCTATATTGCATTCTATCTCTGTTGATAATAATTAATAAAGTAGTTGGCATCTAAACAATGCTTCTTCTATACCTCTGGACAATTGTTTGGTCTGTTACTGTCAATGAATTTCTGAGAGTGTTGATTCTCAGTTCTGACAGTATATTTATTGTATTCCAACCAATAGTTGCAAGCTTTTAGATGTTAAACACATGAAAAAAGGAACAAACAACCTTCAAAATCTATAATTTTAAGAAAAGAAAAGAAATATCACGGTAACGAGATATAGTCAGTATAAAAGGGTTTAATAGTCAGGGAAGTTGCCATCTTGCCCTTATCTGTTCTAAAGAATGCTACTTGTGTTCCTTTGGGCAATTGGTTTTGTCTGTTGCTTGCTTCTGATAGTGTGATGTGAGTGTGTATAGTAAGTATAACTCTGTTGAGCTTTGTTCAAAATCTTGGAAAGTATGAAACTGAAACATGTTGATAAAGTATCTAGAATTTAGTTAGAAGGAGAGACGATATCACATCATTTAATGTATTAACATCAGAATGTCTTTCAGTTTATATGCCTTGTTAGGAACTTTAAGTTATGAAACATGAATTTTCTAGTTTTGTTCATCTTTGAGAGGGCTATGATTCTTCTTGCATAAATGTCGGCCTTTGAAATAAATGGTTTGATCCCGGTGCTGCATTTACCCCTTTTCTTTACTGTATATATTGTATTTACAAGTTTTCTTTGGGTTTTTTTCTTTCATGTGGATGAATATCAGAAGAAATGGCTTTGCTGTATTCAAAGTCCCACTGCTGAATCTTAAGAAGGTTCGTTTAGAAGCTACAGTTGAAAAACTTCATATTATTCTGTAATTGTGCCTGCTGTTGGCTTCTCAAATACAGTGAACTTTTCATGGAGCCTTGATGGTCCTGCTAAATTTTATGCAATTTCATGTAAATCTGAGTGTTGTCTTGTTGTTGTGGAGGAAAAAAAAAGTAAAGAAGAACATGTATTGTATTTATATTATTGATATGGTGGTTTTTTATTAGGGGATAAAGTTGCTATTCTGTCTTTGCCTTTGGTGTGTGAGCTGTAAAGCTTTGCACTGGACATCATGTATAATTGTGGCTGGTATAATTAATGTAATACAACTTTTGCTTTTCTTTCAAACATA

mRNA sequence

TTAGTTTTAAAAGTCTAAAGATTAAGTTAATACAAAGTAAAGTAGAGGTGTTGTATAGTGATACATTTTGTTTACGGTTAAATTGAGTTTAGGTGGACATATGTATATGTATACACAATTGATGTAACCAAATATATATTATATATATGGTTATATAATTTCTCAAGAGGATTTTGGTATCCAATAAGCCCACATTTAGCCCATTTTACAAAAGTCGTCTTTCTTTCTCTCTTTCAATCTCCCACTCTTATTTTTCTCTCATTTCATTCATTTGAAATTCCATTTTTTTTTCCTCCGAAACCTTCTCTCTCTAGAATTCATGACGGACAAAGGTCGGCCATTGCCAAAATTTGGTGAGTGGGATGTTAATGATCCGACATCGGCTGAGGGTTTCACTGTGATTTTCAACAAAGCTAGAGATGAGAAGAAAACAGGCGGCAAACCTGATTCACCTGGAAAAGTTGATGCACATGGCAGGAATGCACCAGATCCTGCCAAGACACCTCCTAATGCTACTTGTGTTCCTTTGGGCAATTGGTTTTGTCTGTTGCTTGCTTCTGATAGTGTGATAAGAAATGGCTTTGCTGTATTCAAAGTCCCACTGCTGAATCTTAAGAAGGTTCGTTTAGAAGCTACAGTTGAAAAACTTCATATTATTCTGTAATTGTGCCTGCTGTTGGCTTCTCAAATACAGTGAACTTTTCATGGAGCCTTGATGGTCCTGCTAAATTTTATGCAATTTCATGTAAATCTGAGTGTTGTCTTGTTGTTGTGGAGGAAAAAAAAAGTAAAGAAGAACATGTATTGTATTTATATTATTGATATGGTGGTTTTTTATTAGGGGATAAAGTTGCTATTCTGTCTTTGCCTTTGGTGTGTGAGCTGTAAAGCTTTGCACTGGACATCATGTATAATTGTGGCTGGTATAATTAATGTAATACAACTTTTGCTTTTCTTTCAAACATA

Coding sequence (CDS)

ATGACGGACAAAGGTCGGCCATTGCCAAAATTTGGTGAGTGGGATGTTAATGATCCGACATCGGCTGAGGGTTTCACTGTGATTTTCAACAAAGCTAGAGATGAGAAGAAAACAGGCGGCAAACCTGATTCACCTGGAAAAGTTGATGCACATGGCAGGAATGCACCAGATCCTGCCAAGACACCTCCTAATGCTACTTGTGTTCCTTTGGGCAATTGGTTTTGTCTGTTGCTTGCTTCTGATAGTGTGATAAGAAATGGCTTTGCTGTATTCAAAGTCCCACTGCTGAATCTTAAGAAGGTTCGTTTAGAAGCTACAGTTGAAAAACTTCATATTATTCTGTAA

Protein sequence

MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTPPNATCVPLGNWFCLLLASDSVIRNGFAVFKVPLLNLKKVRLEATVEKLHIIL

Homology

[Close]

BLAST of CsGy7G007880 vs. NCBI nr
Match: KGN44037.1 (hypothetical protein Csa_7G127370 [Cucumis sativus])

HSP 1 Score: 236.9 bits (603), Expect = 3.4e-59
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0


Query: 1   MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAK 60
           MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAK
Sbjct: 1   MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAK 60

Query: 61  TPPNATCVPLGNWFCLLLASDSVIRNGFAVFKVPLLNLKKVRLEATVEKLHIIL 115
           TPPNATCVPLGNWFCLLLASDSVIRNGFAVFKVPLLNLKKVRLEATVEKLHIIL
Sbjct: 61  TPPNATCVPLGNWFCLLLASDSVIRNGFAVFKVPLLNLKKVRLEATVEKLHIIL 114

[Close]

BLAST of CsGy7G007880 vs. NCBI nr
Match: XP_004148923.1 (PREDICTED: RPM1-interacting protein 4-like [Cucumis sativus])

HSP 1 Score: 138.7 bits (348), Expect = 1.3e-29
Identity = 65/77 (84.42%), Postives = 66/77 (85.71%), Query Frame = 0


Query: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAK 60
          MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAK
Sbjct: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAK 60

Query: 61 TPPNATCVPLGNWFCLL 78
          TPP         W C +
Sbjct: 61 TPPK-------KWLCCI 70

[Close]

BLAST of CsGy7G007880 vs. NCBI nr
Match: XP_008463015.1 (PREDICTED: RPM1-interacting protein 4-like isoform X2 [Cucumis melo])

HSP 1 Score: 134.4 bits (337), Expect = 2.4e-28
Identity = 63/77 (81.82%), Postives = 64/77 (83.12%), Query Frame = 0


Query: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAK 60
          MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGR APDPAK
Sbjct: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRTAPDPAK 60

Query: 61 TPPNATCVPLGNWFCLL 78
           PP         W C +
Sbjct: 61 APPK-------KWLCCI 70

[Close]

BLAST of CsGy7G007880 vs. NCBI nr
Match: XP_008463014.1 (PREDICTED: RPM1-interacting protein 4-like isoform X1 [Cucumis melo])

HSP 1 Score: 133.3 bits (334), Expect = 5.3e-28
Identity = 61/63 (96.83%), Postives = 61/63 (96.83%), Query Frame = 0


Query: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAK 60
          MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGR APDPAK
Sbjct: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRTAPDPAK 60

Query: 61 TPP 64
           PP
Sbjct: 61 APP 63

[Close]

BLAST of CsGy7G007880 vs. NCBI nr
Match: XP_022936748.1 (uncharacterized protein LOC111443250 [Cucurbita moschata] >XP_022975427.1 uncharacterized protein LOC111474733 isoform X2 [Cucurbita maxima] >XP_023535778.1 uncharacterized protein LOC111797108 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 127.1 bits (318), Expect = 3.8e-26
Identity = 60/77 (77.92%), Postives = 62/77 (80.52%), Query Frame = 0


Query: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAK 60
          MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDA GR+  DPAK
Sbjct: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAK 60

Query: 61 TPPNATCVPLGNWFCLL 78
           PP         W C +
Sbjct: 61 APPK-------KWLCCI 70

[Close]

BLAST of CsGy7G007880 vs. TAIR10
Match: AT5G55850.2 (RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 95.9 bits (237), Expect = 1.7e-20
Identity = 48/63 (76.19%), Postives = 52/63 (82.54%), Query Frame = 0


Query: 3  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGK-VDAHGRN-APDPAK 62
          DKGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGGKP SPGK  + H ++   DP+K
Sbjct: 19 DKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKSSEGHVKSGGGDPSK 78

Query: 63 TPP 64
            P
Sbjct: 79 PQP 81

[Close]

BLAST of CsGy7G007880 vs. TAIR10
Match: AT2G04410.1 (RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 94.0 bits (232), Expect = 6.5e-20
Identity = 50/79 (63.29%), Postives = 53/79 (67.09%), Query Frame = 0


Query: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAK 60
          M DKGRPLPKFGEWDVNDP+SAEGFTVIFNKAR+EKK GGK DSPGK D  G N      
Sbjct: 1  MADKGRPLPKFGEWDVNDPSSAEGFTVIFNKARNEKKGGGKSDSPGK-DEPGYNKNGEVL 60

Query: 61 TPPNATCVPLGNWFCLLLA 80
                  P   WFC + A
Sbjct: 61 EK------PAKKWFCCIRA 72

[Close]

BLAST of CsGy7G007880 vs. TAIR10
Match: AT5G40645.1 (RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 68.6 bits (166), Expect = 2.9e-12
Identity = 32/55 (58.18%), Postives = 39/55 (70.91%), Query Frame = 0


Query: 6  RPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAK 61
          RPLPKFGEWDVNDP SAEGFTVIF KARD+KKT     +  +   + ++  +P K
Sbjct: 13 RPLPKFGEWDVNDPASAEGFTVIFAKARDDKKTNASGRAASQRRDNNKSQDEPTK 67

[Close]

BLAST of CsGy7G007880 vs. TAIR10
Match: AT5G63270.1 (RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 68.2 bits (165), Expect = 3.8e-12
Identity = 39/80 (48.75%), Postives = 48/80 (60.00%), Query Frame = 0


Query: 3  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKT----GGKPD---SPGKVDAHGRNA 62
          +KG+PLPKFGEWDVN+P SAEGFTVIF+KA DEKKT    G  P+   SP +     +N 
Sbjct: 4  NKGKPLPKFGEWDVNNPASAEGFTVIFSKASDEKKTKKASGAGPNSLVSPQRNQNSDQNN 63

Query: 63 PDPAKTPPNATCVPLGNWFC 76
             ++ P          WFC
Sbjct: 64 NHSSQNPK-----AKNKWFC 78

[Close]

BLAST of CsGy7G007880 vs. TAIR10
Match: AT4G35655.1 (RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 66.2 bits (160), Expect = 1.5e-11
Identity = 28/34 (82.35%), Postives = 32/34 (94.12%), Query Frame = 0


Query: 6  RPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTG 40
          RPLPKFGEWDVNDP +AEGFTVIF+KA ++KKTG
Sbjct: 8  RPLPKFGEWDVNDPATAEGFTVIFSKAGEDKKTG 41

[Close]

BLAST of CsGy7G007880 vs. Swiss-Prot
Match: sp|O22633|NOI4_ARATH (Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.3e-20
Identity = 52/81 (64.20%), Postives = 58/81 (71.60%), Query Frame = 0


Query: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGK-VDAHGRN-APDP 60
          M+DKGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGGKP SPGK  + H ++   DP
Sbjct: 1  MSDKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKSSEGHVKSGGGDP 60

Query: 61 AKTPPNATCVPLGNWFCLLLA 80
          +K  P         W C + A
Sbjct: 61 SKPQPK-------KWLCCMQA 74

[Close]

BLAST of CsGy7G007880 vs. Swiss-Prot
Match: sp|Q8GYN5|RIN4_ARATH (RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 3.9e-06
Identity = 21/49 (42.86%), Postives = 32/49 (65.31%), Query Frame = 0


Query: 3   DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAH 52
           +K   +PKFG+WD N+P+SA+G+T IFNK R+E+ +G       +   H
Sbjct: 143 EKVTVVPKFGDWDENNPSSADGYTHIFNKVREERSSGANVSGSSRTPTH 191

[Close]

BLAST of CsGy7G007880 vs. TrEMBL
Match: tr|A0A0A0K6Y6|A0A0A0K6Y6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G127370 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 2.3e-59
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0


Query: 1   MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAK 60
           MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAK
Sbjct: 1   MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAK 60

Query: 61  TPPNATCVPLGNWFCLLLASDSVIRNGFAVFKVPLLNLKKVRLEATVEKLHIIL 115
           TPPNATCVPLGNWFCLLLASDSVIRNGFAVFKVPLLNLKKVRLEATVEKLHIIL
Sbjct: 61  TPPNATCVPLGNWFCLLLASDSVIRNGFAVFKVPLLNLKKVRLEATVEKLHIIL 114

[Close]

BLAST of CsGy7G007880 vs. TrEMBL
Match: tr|A0A1S3CI91|A0A1S3CI91_CUCME (RPM1-interacting protein 4-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501257 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.6e-28
Identity = 63/77 (81.82%), Postives = 64/77 (83.12%), Query Frame = 0


Query: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAK 60
          MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGR APDPAK
Sbjct: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRTAPDPAK 60

Query: 61 TPPNATCVPLGNWFCLL 78
           PP         W C +
Sbjct: 61 APPK-------KWLCCI 70

[Close]

BLAST of CsGy7G007880 vs. TrEMBL
Match: tr|A0A1S3CI83|A0A1S3CI83_CUCME (RPM1-interacting protein 4-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501257 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 3.5e-28
Identity = 61/63 (96.83%), Postives = 61/63 (96.83%), Query Frame = 0


Query: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAK 60
          MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGR APDPAK
Sbjct: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRTAPDPAK 60

Query: 61 TPP 64
           PP
Sbjct: 61 APP 63

[Close]

BLAST of CsGy7G007880 vs. TrEMBL
Match: tr|V4UTF7|V4UTF7_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10010079mg PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 7.6e-23
Identity = 56/77 (72.73%), Postives = 59/77 (76.62%), Query Frame = 0


Query: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAK 60
          M+DKGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGGKPDSPGKVD   R+  DPAK
Sbjct: 1  MSDKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPDSPGKVDPPIRHGVDPAK 60

Query: 61 TPPNATCVPLGNWFCLL 78
            P         WFC +
Sbjct: 61 PQPR-------KWFCCI 70

[Close]

BLAST of CsGy7G007880 vs. TrEMBL
Match: tr|A0A067F7I0|A0A067F7I0_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g034970mg PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 7.6e-23
Identity = 56/77 (72.73%), Postives = 59/77 (76.62%), Query Frame = 0


Query: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAK 60
          M+DKGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGGKPDSPGKVD   R+  DPAK
Sbjct: 1  MSDKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPDSPGKVDPPIRHGVDPAK 60

Query: 61 TPPNATCVPLGNWFCLL 78
            P         WFC +
Sbjct: 61 PQPR-------KWFCCI 70

The following BLAST results are available for this feature:

BLAST of CsGy7G007880 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN44037.1	3.4e-59	100.00	hypothetical protein Csa_7G127370 [Cucumis sativus]	[more]
XP_004148923.1	1.3e-29	84.42	PREDICTED: RPM1-interacting protein 4-like [Cucumis sativus]	[more]
XP_008463015.1	2.4e-28	81.82	PREDICTED: RPM1-interacting protein 4-like isoform X2 [Cucumis melo]	[more]
XP_008463014.1	5.3e-28	96.83	PREDICTED: RPM1-interacting protein 4-like isoform X1 [Cucumis melo]	[more]
XP_022936748.1	3.8e-26	77.92	uncharacterized protein LOC111443250 [Cucurbita moschata] >XP_022975427.1 unchar...	[more]

BLAST of CsGy7G007880 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G55850.2	1.7e-20	76.19	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT2G04410.1	6.5e-20	63.29	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G40645.1	2.9e-12	58.18	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G63270.1	3.8e-12	48.75	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT4G35655.1	1.5e-11	82.35	RPM1-interacting protein 4 (RIN4) family protein	[more]

BLAST of CsGy7G007880 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O22633\|NOI4_ARATH	1.3e-20	64.20	Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1	[more]
sp\|Q8GYN5\|RIN4_ARATH	3.9e-06	42.86	RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1	[more]

BLAST of CsGy7G007880 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K6Y6\|A0A0A0K6Y6_CUCSA	2.3e-59	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G127370 PE=4 SV=1	[more]
tr\|A0A1S3CI91\|A0A1S3CI91_CUCME	1.6e-28	81.82	RPM1-interacting protein 4-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC1035012...	[more]
tr\|A0A1S3CI83\|A0A1S3CI83_CUCME	3.5e-28	96.83	RPM1-interacting protein 4-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC1035012...	[more]
tr\|V4UTF7\|V4UTF7_9ROSI	7.6e-23	72.73	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10010079mg PE=4 ...	[more]
tr\|A0A067F7I0\|A0A067F7I0_CITSI	7.6e-23	72.73	Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g034970mg PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008700	TypeIII_avirulence_cleave

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy7G007880.1	CsGy7G007880.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008700	RIN4, pathogenic type III effector avirulence factor Avr cleavage site	PFAM	PF05627	AvrRpt-cleavage	coord: 3..38 e-value: 1.6E-21 score: 75.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..54
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..63
None	No IPR available	PANTHER	PTHR33159	FAMILY NOT NAMED	coord: 1..64
None	No IPR available	PANTHER	PTHR33159:SF2	RPM1-INTERACTING PROTEIN 4 RIN4 FAMILY PROTEIN	coord: 1..64

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy7G007880	Cla003318	Watermelon (97103) v1	cgybwmB523
CsGy7G007880	Csa7G127370	Cucumber (Chinese Long) v2	cgybcuB324
CsGy7G007880	MELO3C024949	Melon (DHL92) v3.5.1	cgybmeB463
CsGy7G007880	ClCG09G021410	Watermelon (Charleston Gray)	cgybwcgB480
CsGy7G007880	CSPI07G08380	Wild cucumber (PI 183967)	cgybcpiB332
CsGy7G007880	CmaCh09G010160	Cucurbita maxima (Rimu)	cgybcmaB884
CsGy7G007880	CmaCh01G010690	Cucurbita maxima (Rimu)	cgybcmaB928
CsGy7G007880	CmoCh09G010190	Cucurbita moschata (Rifu)	cgybcmoB866
CsGy7G007880	CmoCh01G011130	Cucurbita moschata (Rifu)	cgybcmoB924
CsGy7G007880	Lsi02G018190	Bottle gourd (USVL1VR-Ls)	cgyblsiB481
CsGy7G007880	Cp4.1LG06g08430	Cucurbita pepo (Zucchini)	cgybcpeB980
CsGy7G007880	Cp4.1LG02g00550	Cucurbita pepo (Zucchini)	cgybcpeB948
CsGy7G007880	MELO3C024949.2	Melon (DHL92) v3.6.1	cgybmedB476
CsGy7G007880	CsaV3_7G011460	Cucumber (Chinese Long) v3	cgybcucB348
CsGy7G007880	Cla97C09G182810	Watermelon (97103) v2	cgybwmbB537
CsGy7G007880	Bhi09G001488	Wax gourd	cgybwgoB666
CsGy7G007880	Carg22417	Silver-seed gourd	carcgybB0871
CsGy7G007880	Carg12880	Silver-seed gourd	carcgybB0894

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy7G007880	Cucurbita maxima (Rimu)	cgybcmaB942
CsGy7G007880	Bottle gourd (USVL1VR-Ls)	cgyblsiB473
CsGy7G007880	Melon (DHL92) v3.6.1	cgybmedB457