MELO3C021372 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C021372
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionDisease resistance protein (TIR-NBS-LRR class) family
Locationchr11 : 27086351 .. 27086999 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ACAATCACAACTCAACTAACCCCACCTCCCAAAAACCAAAAGCTAGAAAAAAAAGACCCAATTCTTTTTCTTTGTTTATTCCTTATAATAAACCACCAAAATTGATTTTTATTTATTTATAATAATAATAATCAATATCCCATCATATATGGACCAAATCAAAGATGCTTCTTCATTTTTCCTATGGGAAGATAGTGCAGATTCTGAGGTTGATAAATTATTGTCTCATCCTCATGAATTAGAGTCTGCTGTGGATGATGATGATCAGGAGGATGCTTGCTCCTGCAGTTGCAATAATAATGATTTTTCTATTGATGATTTGAGAGCCCTTGATTTCCAAGACGATGGGGATAATGGTGATAGAGATCTTGATCAAGACATTTGTTTGATTGGTGACGGCGGAAGGCGGCGGAGCGGGGCAGCGCTGAAGTATGGTTACGAAGAAGAGGAGGAGGAAGAAGAAGAAGAGTCGAGTGATGATGTGGGTGTGATTCGGAATATGAATGAAATGGAAGATAAGCTCTTTTGGGACACTTGCATGGCGGGAGGGTACCCCTGAACCTTTAAATTTGTTGTTCTGTCATAAACCCTATATCTCATTTTAGTTACAAAACCACTTTTATGATTATTCTATTTGGATCCATTGAGA

mRNA sequence

ACAATCACAACTCAACTAACCCCACCTCCCAAAAACCAAAAGCTAGAAAAAAAAGACCCAATTCTTTTTCTTTGTTTATTCCTTATAATAAACCACCAAAATTGATTTTTATTTATTTATAATAATAATAATCAATATCCCATCATATATGGACCAAATCAAAGATGCTTCTTCATTTTTCCTATGGGAAGATAGTGCAGATTCTGAGGTTGATAAATTATTGTCTCATCCTCATGAATTAGAGTCTGCTGTGGATGATGATGATCAGGAGGATGCTTGCTCCTGCAGTTGCAATAATAATGATTTTTCTATTGATGATTTGAGAGCCCTTGATTTCCAAGACGATGGGGATAATGGTGATAGAGATCTTGATCAAGACATTTGTTTGATTGGTGACGGCGGAAGGCGGCGGAGCGGGGCAGCGCTGAAGTATGGTTACGAAGAAGAGGAGGAGGAAGAAGAAGAAGAGTCGAGTGATGATGTGGGTGTGATTCGGAATATGAATGAAATGGAAGATAAGCTCTTTTGGGACACTTGCATGGCGGGAGGGTACCCCTGAACCTTTAAATTTGTTGTTCTGTCATAAACCCTATATCTCATTTTAGTTACAAAACCACTTTTATGATTATTCTATTTGGATCCATTGAGA

Coding sequence (CDS)

ATGGACCAAATCAAAGATGCTTCTTCATTTTTCCTATGGGAAGATAGTGCAGATTCTGAGGTTGATAAATTATTGTCTCATCCTCATGAATTAGAGTCTGCTGTGGATGATGATGATCAGGAGGATGCTTGCTCCTGCAGTTGCAATAATAATGATTTTTCTATTGATGATTTGAGAGCCCTTGATTTCCAAGACGATGGGGATAATGGTGATAGAGATCTTGATCAAGACATTTGTTTGATTGGTGACGGCGGAAGGCGGCGGAGCGGGGCAGCGCTGAAGTATGGTTACGAAGAAGAGGAGGAGGAAGAAGAAGAAGAGTCGAGTGATGATGTGGGTGTGATTCGGAATATGAATGAAATGGAAGATAAGCTCTTTTGGGACACTTGCATGGCGGGAGGGTACCCCTGA

Protein sequence

MDQIKDASSFFLWEDSADSEVDKLLSHPHELESAVDDDDQEDACSCSCNNNDFSIDDLRALDFQDDGDNGDRDLDQDICLIGDGGRRRSGAALKYGYEEEEEEEEEESSDDVGVIRNMNEMEDKLFWDTCMAGGYP*
Homology
[Close]
BLAST of MELO3C021372 vs. TrEMBL
Match: A0A0A0KBF3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G067420 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 4.2e-54
Identity = 119/141 (84.40%), Postives = 122/141 (86.52%), Query Frame = 1 

Query: 1   MDQIKDASSFFLWEDSADSEVDKLLSHP-HELESAVDD-DDQEDACSCSCNNNDFSIDDL 60
           MDQIKDASSFFLWEDSADSEVDKLLSHP H+LESAVDD DDQEDACSCSCNNNDFSIDD 
Sbjct: 1   MDQIKDASSFFLWEDSADSEVDKLLSHPPHQLESAVDDADDQEDACSCSCNNNDFSIDD- 60

Query: 61  RALDFQD--DGDNGDRDLDQDICLIGDGGRRRSGAALKYGYEEEEEEEEEESSD-DVGVI 120
               FQD  DGDNGD D  QDI LIGDGGRRRSGA    GYEEEEEEEEEESS+ DVG I
Sbjct: 61  ----FQDAYDGDNGDGD--QDIGLIGDGGRRRSGA----GYEEEEEEEEEESSNNDVGAI 120

Query: 121 RNMNEMEDKLFWDTCMAGGYP 137
           RNMNEMEDK+FWDTCMAGGYP
Sbjct: 121 RNMNEMEDKVFWDTCMAGGYP 130

[Close]
BLAST of MELO3C021372 vs. TrEMBL
Match: A0A067G8N3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032474mg PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.9e-14
Identity = 52/142 (36.62%), Postives = 77/142 (54.23%), Query Frame = 1 

Query: 6   DASSFFLWEDSADSEVDKLLSHPHELESAVDDDDQEDACSCSCNNNDFSID------DLR 65
           D SSF L E+SADSEVD L       ++ +   D++DA SCSC+  +   +      +L+
Sbjct: 8   DVSSFVLVEESADSEVDSLTCEMCLRDAVMATGDEDDAESCSCDTIEMQAEGLDYDHELK 67

Query: 66  ALDFQDDGDNGDRDLDQDICLIGDGGRRRSGAALKYGYEEEEEEEEEESSDDVGVIRNMN 125
             +F DDGD    D  + I            ++ K  + +  ++EEE SS D+G+  N++
Sbjct: 68  NEEFDDDGDGSSTDQHRQI---------NWSSSCKIWWADGADDEEEYSSWDIGINNNIS 127

Query: 126 -----EMEDKLFWDTCMAGGYP 137
                EMED+LFW+TCMA GYP
Sbjct: 128 RKVKDEMEDRLFWETCMAFGYP 140

[Close]
BLAST of MELO3C021372 vs. TrEMBL
Match: A0A061ENY6_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_021111 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.8e-09
Identity = 49/135 (36.30%), Postives = 64/135 (47.41%), Query Frame = 1 

Query: 4   IKDASSFFLWEDSADSEVD--KLLSHPHELESAVDDDDQEDACSCSCNNNDFSIDDLRAL 63
           I D + F L EDS DSE+D   ++   H ++  +  D+ +DA SCSC+ ++   D    L
Sbjct: 215 IVDVTCFLLVEDSGDSELDCEPIIQQCHNMDVGIAADE-DDAESCSCDTSERLDDCYEVL 274

Query: 64  DFQDDGDNGDRDLDQDICLIGDGGRRRSGAALKYGYEEEEEEEEEESSDDVGVIRNMNEM 123
               D D  D D   D    G             GY   EE EEE   D       M+ M
Sbjct: 275 QLDGDQDFSDWDEPAD----GWSSCEMWSIDEALGYASAEEGEEEPRFDINLCGEVMDGM 334

Query: 124 EDKLFWDTCMAGGYP 137
           ED+LFW+TCMA GYP
Sbjct: 335 EDRLFWETCMAVGYP 344

[Close]
BLAST of MELO3C021372 vs. TrEMBL
Match: A0A059B4L9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H03672 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 9.1e-09
Identity = 46/130 (35.38%), Postives = 65/130 (50.00%), Query Frame = 1 

Query: 8   SSFFLWEDSADSEVDKLLSHPHELESAVDDDDQEDACSCSCNNNDFSIDDLRALDFQDDG 67
           SS+ L E+SADSE D + S  + +    DDDD E   SCSC+  + S      +D QD G
Sbjct: 2   SSYLLMEESADSEADFVQSEFNAICGGSDDDDAE---SCSCDTGEVSGSHEDDVDGQDSG 61

Query: 68  DNGDRDLDQDICLIGDGGRRRSGAALKYGYEEEEEEEEEESSDDVGVIRN-MNEMEDKLF 127
           D  + +L     ++    R     ++    E+E        S   G+ +  M+ MEDK F
Sbjct: 62  DQWN-NLSHGSSIVWASDREDGHVSMGVDEEKESWVNSGGGSGGRGLSKEEMDAMEDKDF 121

Query: 128 WDTCMAGGYP 137
           W+TCMA GYP
Sbjct: 122 WETCMAIGYP 127

[Close]
BLAST of MELO3C021372 vs. TrEMBL
Match: A0A059B4B4_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H03671 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.0e-08
Identity = 49/149 (32.89%), Postives = 70/149 (46.98%), Query Frame = 1 

Query: 1   MDQIKDASSFFLWEDSADSEVDKLLSHPHELESAVDDDDQEDACSCSCNNNDFSIDDLRA 60
           M  + D SS+ L E+SADSEVD + S          DD  +DA SCSC+  + S   +  
Sbjct: 1   MSHLADMSSYLLMEESADSEVDFVQSKVTANCGGSIDDGDDDAESCSCDAREVSGSYVDD 60

Query: 61  LDFQDDGDNGDRDLDQDICLIGDGGRRRSGAALKYGYEEEEE-----EEEEESSDDVGVI 120
            D +D GD  +                R G++  +  + E+E     E+E+ES  D G  
Sbjct: 61  CDNRDPGDQWN--------------NLRQGSSTVWVSDREDEHMSRDEDEDESWVDSGSG 120

Query: 121 RNMNEM--------EDKLFWDTCMAGGYP 137
               ++        EDK+FW+TCMA GYP
Sbjct: 121 SGSRDLSKKETDATEDKVFWETCMAIGYP 135

[Close]
BLAST of MELO3C021372 vs. NCBI nr
Match: gi|700190980|gb|KGN46184.1| (hypothetical protein Csa_6G067420 [Cucumis sativus])

HSP 1 Score: 218.8 bits (556), Expect = 6.0e-54
Identity = 119/141 (84.40%), Postives = 122/141 (86.52%), Query Frame = 1 

Query: 1   MDQIKDASSFFLWEDSADSEVDKLLSHP-HELESAVDD-DDQEDACSCSCNNNDFSIDDL 60
           MDQIKDASSFFLWEDSADSEVDKLLSHP H+LESAVDD DDQEDACSCSCNNNDFSIDD 
Sbjct: 1   MDQIKDASSFFLWEDSADSEVDKLLSHPPHQLESAVDDADDQEDACSCSCNNNDFSIDD- 60

Query: 61  RALDFQD--DGDNGDRDLDQDICLIGDGGRRRSGAALKYGYEEEEEEEEEESSD-DVGVI 120
               FQD  DGDNGD D  QDI LIGDGGRRRSGA    GYEEEEEEEEEESS+ DVG I
Sbjct: 61  ----FQDAYDGDNGDGD--QDIGLIGDGGRRRSGA----GYEEEEEEEEEESSNNDVGAI 120

Query: 121 RNMNEMEDKLFWDTCMAGGYP 137
           RNMNEMEDK+FWDTCMAGGYP
Sbjct: 121 RNMNEMEDKVFWDTCMAGGYP 130

[Close]
BLAST of MELO3C021372 vs. NCBI nr
Match: gi|641856195|gb|KDO74975.1| (hypothetical protein CISIN_1g032474mg [Citrus sinensis])

HSP 1 Score: 87.0 bits (214), Expect = 2.7e-14
Identity = 52/142 (36.62%), Postives = 77/142 (54.23%), Query Frame = 1 

Query: 6   DASSFFLWEDSADSEVDKLLSHPHELESAVDDDDQEDACSCSCNNNDFSID------DLR 65
           D SSF L E+SADSEVD L       ++ +   D++DA SCSC+  +   +      +L+
Sbjct: 8   DVSSFVLVEESADSEVDSLTCEMCLRDAVMATGDEDDAESCSCDTIEMQAEGLDYDHELK 67

Query: 66  ALDFQDDGDNGDRDLDQDICLIGDGGRRRSGAALKYGYEEEEEEEEEESSDDVGVIRNMN 125
             +F DDGD    D  + I            ++ K  + +  ++EEE SS D+G+  N++
Sbjct: 68  NEEFDDDGDGSSTDQHRQI---------NWSSSCKIWWADGADDEEEYSSWDIGINNNIS 127

Query: 126 -----EMEDKLFWDTCMAGGYP 137
                EMED+LFW+TCMA GYP
Sbjct: 128 RKVKDEMEDRLFWETCMAFGYP 140

[Close]
BLAST of MELO3C021372 vs. NCBI nr
Match: gi|590660582|ref|XP_007035437.1| (Uncharacterized protein TCM_021111 [Theobroma cacao])

HSP 1 Score: 70.5 bits (171), Expect = 2.6e-09
Identity = 49/135 (36.30%), Postives = 64/135 (47.41%), Query Frame = 1 

Query: 4   IKDASSFFLWEDSADSEVD--KLLSHPHELESAVDDDDQEDACSCSCNNNDFSIDDLRAL 63
           I D + F L EDS DSE+D   ++   H ++  +  D+ +DA SCSC+ ++   D    L
Sbjct: 215 IVDVTCFLLVEDSGDSELDCEPIIQQCHNMDVGIAADE-DDAESCSCDTSERLDDCYEVL 274

Query: 64  DFQDDGDNGDRDLDQDICLIGDGGRRRSGAALKYGYEEEEEEEEEESSDDVGVIRNMNEM 123
               D D  D D   D    G             GY   EE EEE   D       M+ M
Sbjct: 275 QLDGDQDFSDWDEPAD----GWSSCEMWSIDEALGYASAEEGEEEPRFDINLCGEVMDGM 334

Query: 124 EDKLFWDTCMAGGYP 137
           ED+LFW+TCMA GYP
Sbjct: 335 EDRLFWETCMAVGYP 344

[Close]
BLAST of MELO3C021372 vs. NCBI nr
Match: gi|629094944|gb|KCW60939.1| (hypothetical protein EUGRSUZ_H03672 [Eucalyptus grandis])

HSP 1 Score: 68.2 bits (165), Expect = 1.3e-08
Identity = 46/130 (35.38%), Postives = 65/130 (50.00%), Query Frame = 1 

Query: 8   SSFFLWEDSADSEVDKLLSHPHELESAVDDDDQEDACSCSCNNNDFSIDDLRALDFQDDG 67
           SS+ L E+SADSE D + S  + +    DDDD E   SCSC+  + S      +D QD G
Sbjct: 2   SSYLLMEESADSEADFVQSEFNAICGGSDDDDAE---SCSCDTGEVSGSHEDDVDGQDSG 61

Query: 68  DNGDRDLDQDICLIGDGGRRRSGAALKYGYEEEEEEEEEESSDDVGVIRN-MNEMEDKLF 127
           D  + +L     ++    R     ++    E+E        S   G+ +  M+ MEDK F
Sbjct: 62  DQWN-NLSHGSSIVWASDREDGHVSMGVDEEKESWVNSGGGSGGRGLSKEEMDAMEDKDF 121

Query: 128 WDTCMAGGYP 137
           W+TCMA GYP
Sbjct: 122 WETCMAIGYP 127

[Close]
BLAST of MELO3C021372 vs. NCBI nr
Match: gi|629094943|gb|KCW60938.1| (hypothetical protein EUGRSUZ_H03671 [Eucalyptus grandis])

HSP 1 Score: 67.0 bits (162), Expect = 2.9e-08
Identity = 49/149 (32.89%), Postives = 70/149 (46.98%), Query Frame = 1 

Query: 1   MDQIKDASSFFLWEDSADSEVDKLLSHPHELESAVDDDDQEDACSCSCNNNDFSIDDLRA 60
           M  + D SS+ L E+SADSEVD + S          DD  +DA SCSC+  + S   +  
Sbjct: 1   MSHLADMSSYLLMEESADSEVDFVQSKVTANCGGSIDDGDDDAESCSCDAREVSGSYVDD 60

Query: 61  LDFQDDGDNGDRDLDQDICLIGDGGRRRSGAALKYGYEEEEE-----EEEEESSDDVGVI 120
            D +D GD  +                R G++  +  + E+E     E+E+ES  D G  
Sbjct: 61  CDNRDPGDQWN--------------NLRQGSSTVWVSDREDEHMSRDEDEDESWVDSGSG 120

Query: 121 RNMNEM--------EDKLFWDTCMAGGYP 137
               ++        EDK+FW+TCMA GYP
Sbjct: 121 SGSRDLSKKETDATEDKVFWETCMAIGYP 135

The following BLAST results are available for this feature:
BLAST of MELO3C021372 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KBF3_CUCSA4.2e-5484.40Uncharacterized protein OS=Cucumis sativus GN=Csa_6G067420 PE=4 SV=1[more]
A0A067G8N3_CITSI1.9e-1436.62Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032474mg PE=4 SV=1[more]
A0A061ENY6_THECC1.8e-0936.30Uncharacterized protein OS=Theobroma cacao GN=TCM_021111 PE=4 SV=1[more]
A0A059B4L9_EUCGR9.1e-0935.38Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H03672 PE=4 SV=1[more]
A0A059B4B4_EUCGR2.0e-0832.89Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H03671 PE=4 SV=1[more]
BLAST of MELO3C021372 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700190980|gb|KGN46184.1|6.0e-5484.40hypothetical protein Csa_6G067420 [Cucumis sativus][more]
gi|641856195|gb|KDO74975.1|2.7e-1436.62hypothetical protein CISIN_1g032474mg [Citrus sinensis][more]
gi|590660582|ref|XP_007035437.1|2.6e-0936.30Uncharacterized protein TCM_021111 [Theobroma cacao][more]
gi|629094944|gb|KCW60939.1|1.3e-0835.38hypothetical protein EUGRSUZ_H03672 [Eucalyptus grandis][more]
gi|629094943|gb|KCW60938.1|2.9e-0832.89hypothetical protein EUGRSUZ_H03671 [Eucalyptus grandis][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C021372T1MELO3C021372T1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C021372Csa6G067420Cucumber (Chinese Long) v2cumeB427
MELO3C021372Cla009342Watermelon (97103) v1mewmB141
MELO3C021372ClCG06G005490Watermelon (Charleston Gray)mewcgB124
MELO3C021372Cla97C06G115000Watermelon (97103) v2mewmbB128
MELO3C021372Bhi12G001565Wax gourdmewgoB100
MELO3C021372CSPI06G05320Wild cucumber (PI 183967)cpimeB421
MELO3C021372Cucsa.363340Cucumber (Gy14) v1cgymeB587
MELO3C021372CmaCh17G002990Cucurbita maxima (Rimu)cmameB313
MELO3C021372CmoCh17G002870Cucurbita moschata (Rifu)cmomeB306
MELO3C021372Lsi09G013870Bottle gourd (USVL1VR-Ls)lsimeB017
MELO3C021372Cp4.1LG12g02460Cucurbita pepo (Zucchini)cpemeB112
MELO3C021372CsGy6G005280Cucumber (Gy14) v2cgybmeB369
MELO3C021372CsaV3_6G005640Cucumber (Chinese Long) v3cucmeB433
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C021372Cucumber (Chinese Long) v3cucmeB176
MELO3C021372Watermelon (97103) v2mewmbB123
MELO3C021372Wax gourdmewgoB105
MELO3C021372Melon (DHL92) v3.5.1memeB051
MELO3C021372Cucumber (Gy14) v1cgymeB430
MELO3C021372Cucurbita maxima (Rimu)cmameB215
MELO3C021372Cucurbita maxima (Rimu)cmameB747
MELO3C021372Cucurbita maxima (Rimu)cmameB816
MELO3C021372Cucurbita moschata (Rifu)cmomeB200
MELO3C021372Cucurbita moschata (Rifu)cmomeB738
MELO3C021372Cucurbita moschata (Rifu)cmomeB800
MELO3C021372Wild cucumber (PI 183967)cpimeB174
MELO3C021372Cucumber (Chinese Long) v2cumeB180
MELO3C021372Watermelon (Charleston Gray)mewcgB121
MELO3C021372Watermelon (97103) v1mewmB096
MELO3C021372Cucurbita pepo (Zucchini)cpemeB289
MELO3C021372Cucurbita pepo (Zucchini)cpemeB555
MELO3C021372Cucurbita pepo (Zucchini)cpemeB793
MELO3C021372Bottle gourd (USVL1VR-Ls)lsimeB342
MELO3C021372Cucumber (Gy14) v2cgybmeB149
MELO3C021372Silver-seed gourdcarmeB0067
MELO3C021372Silver-seed gourdcarmeB0327
MELO3C021372Silver-seed gourdcarmeB0609
MELO3C021372Silver-seed gourdcarmeB0827