MELO3C019981 (gene) Melon (DHL92) v3.5.1

NameMELO3C019981
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionEarly response-like dehydration-protein
Locationchr3 : 19938106 .. 19940699 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTCATCCTCATCCCTCATCGACCTTCAAATTAACCAACCAACCCAGTGGCTATGGATGTTGTCACTCAAAGAAACTCCTCTTCTTCCGTTTCCATGTTGAATCCCAACGCTCCCTTGTTCGTTCCCATGGCGTATAGGACGGTCGAGGATTTCTCCGACCAGTGGTGGGAGCTCATCCAGTCCTCCCCCTGGTTCCGTGAGTACTGGCTTCAAGAACGCTTTCAAGATCCTCAAAATGAACTTCCGTTTGGTGAAAATGAAGAATTCGTCCTTCCGGATCTTGAAAGTTTCTTCGATGACTTCACTCGTCAACGTTAAAAAAAACGAAATCCAGTCATCGAATCTGTCTATTCGTTTTCCTTCTCTTAATCGAGCTTACTAATTCGTTGTTTCTTTTGTTTTCTTCTTCAGAGGAAGAGGAAGAATTGGAATTCTCGAAAGACTTAGTTCCAATGGGAGCTTTCAAATGGCAGAAGGCTCGGTCTGGAGCGGAGGTTCCTAAGTATGCTCAAAAGGCTCCCAAGATCGTGAACGTGAAAGTGAGTCCGAGAACGATTCACCAACCGAGATAGATTTTACGCGCCCAATCGAGTACGTTTCTTCATCAGAACTCAAGAACCAGTTTGAATTGTTGTTGATCTAGGGTTTTCCATTTTTCCTTTTTTTTTTTTTTTTTTTTTTATTTTTTT

mRNA sequence

ATTCATCCTCATCCCTCATCGACCTTCAAATTAACCAACCAACCCAGTGGCTATGGATGTTGTCACTCAAAGAAACTCCTCTTCTTCCGTTTCCATGTTGAATCCCAACGCTCCCTTGTTCGTTCCCATGGCGTATAGGACGGTCGAGGATTTCTCCGACCAGTGGTGGGAGCTCATCCAGTCCTCCCCCTGGTTCCGTGAGTACTGGCTTCAAGAACGCTTTCAAGATCCTCAAAATGAACTTCCGTTTGGTGAAAATGAAGAATTCGTCCTTCCGGATCTTGAAAGTTTCTTCGATGACTTCACTCGTCAACAGGAAGAGGAAGAATTGGAATTCTCGAAAGACTTAGTTCCAATGGGAGCTTTCAAATGGCAGAAGGCTCGGTCTGGAGCGGAGGTTCCTAAGTATGCTCAAAAGGCTCCCAAGATCGTGAACGTGAAAGTGAGTCCGAGAACGATTCACCAACCGAGATAGATTTTACGCGCCCAATCGAGTACGTTTCTTCATCAGAACTCAAGAACCAGTTTGAATTGTTGTTGATCTAGGGTTTTCCATTTTTCCTTTTTTTTTTTTTTTTTTTTTTATTTTTTT

Coding sequence (CDS)

ATGGATGTTGTCACTCAAAGAAACTCCTCTTCTTCCGTTTCCATGTTGAATCCCAACGCTCCCTTGTTCGTTCCCATGGCGTATAGGACGGTCGAGGATTTCTCCGACCAGTGGTGGGAGCTCATCCAGTCCTCCCCCTGGTTCCGTGAGTACTGGCTTCAAGAACGCTTTCAAGATCCTCAAAATGAACTTCCGTTTGGTGAAAATGAAGAATTCGTCCTTCCGGATCTTGAAAGTTTCTTCGATGACTTCACTCGTCAACAGGAAGAGGAAGAATTGGAATTCTCGAAAGACTTAGTTCCAATGGGAGCTTTCAAATGGCAGAAGGCTCGGTCTGGAGCGGAGGTTCCTAAGTATGCTCAAAAGGCTCCCAAGATCGTGAACGTGAAAGTGAGTCCGAGAACGATTCACCAACCGAGATAG

Protein sequence

MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDPQNELPFGENEEFVLPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYAQKAPKIVNVKVSPRTIHQPR*
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU45788melon EST collection version 4.0transcribed_cluster
MU50976melon EST collection version 4.0transcribed_cluster
MU51689melon EST collection version 4.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C019981T1MELO3C019981T1mRNA
MELO3C019981T2MELO3C019981T2mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU50976MU50976transcribed_cluster
MU45788MU45788transcribed_cluster
MU51689MU51689transcribed_cluster


Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33790FAMILY NOT NAMEDcoord: 6..140
score: 2.8
NoneNo IPR availablePANTHERPTHR33790:SF3SUBFAMILY NOT NAMEDcoord: 6..140
score: 2.8