CsaV3_6G002060 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G002060
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionProtein early responsive to dehydration 15
Locationchr6 : 1421313 .. 1423840 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTAACAAAATTAAATATTGTATATGAACTCAGATAACAAAATGAAAAGAAATACAAACTCAAAACTAAATTGAATGAACATTATTATATAATTATAACATATAAAAATATTTGTTACGTACATTGTTATATAATTTTTTTTATAAGATTAATAAAAAAAGATGTTACTTTACATTAATTATTATAAAAATATATGTTACTTATGGTTTGAAGATGACATGGGGACCAAAAACCGTGTGTAGTATTAAAAACTTCTGTCAATTAGTTAAAGAAATCCAACACCGTTTTTTTAAAAACATTGGGCCAAAATTCCATCTTCAATTTTGCTTTTAAACAGTGTCATTTCCGTAATAAAACTAAACTCTAAGTCCTATTCCATTTTTTCATTTTTATATATTTCATCCCATCTTCATCTTCATCTTCATAAACTCATCCCAACCCAACCCAACCGACCCAGTGGAATATGGATGTTGTTACTCAAAGAAACTCCTCTTCCTCCGTTTCCATGTTGAATCCCAACGCTCCTTTGTTCGTTCCCATGGCCTATAGAACGGTGGAGGATTTCTCCGACCAGTGGTGGGAGCTCATCCAGTCCTCCCCCTGGTTCCGTGAGTACTGGCTTCAAGAACGCTTTCAAGATCCTCAAAATGAACTTTCTTTTGGTGAAAATGAAGAATTCATCCTTCCGGATCTTGAAAGTTTCTTCGACGACTTCACTCGTCAACGTAAGAAACGAAATCGAGTCATCGAGTCAGTTTATTTCTTTTCCTTCTCTTAATCGAGCTTTCTAATTTGTTGTTTATTTTGTTTTCTTCTTCAGAGGAAGAGGAAGAATTGGAATTCTCGAAGGATTTAGTTCCAATGGGTGCTTTCAAATGGCAGAAGGCTCGGTCTGGAGCGGAGGTTCCTAAGTATGCTCAAAAGGCTCCCAAGATTGTGAACGTGAAAGTGAGTCCGAGAACGATTCACCAACCGAGATAGATTTCACGCGCTCAATCGAGTACGTTTCTTCATCAGAACTCCAGAAACAGTTTGAATTGTTGTTGATCTAGGGTTTTTCATTTCCT

mRNA sequence

ATGGATGTTGTTACTCAAAGAAACTCCTCTTCCTCCGTTTCCATGTTGAATCCCAACGCTCCTTTGTTCGTTCCCATGGCCTATAGAACGGTGGAGGATTTCTCCGACCAGTGGTGGGAGCTCATCCAGTCCTCCCCCTGGTTCCGTGAGTACTGGCTTCAAGAACGCTTTCAAGATCCTCAAAATGAACTTTCTTTTGGTGAAAATGAAGAATTCATCCTTCCGGATCTTGAAAGTTTCTTCGACGACTTCACTCGTCAACAGGAAGAGGAAGAATTGGAATTCTCGAAGGATTTAGTTCCAATGGGTGCTTTCAAATGGCAGAAGGCTCGGTCTGGAGCGGAGGTTCCTAAGTATGCTCAAAAGGCTCCCAAGATTGTGAACGTGAAAGTGAGTCCGAGAACGATTCACCAACCGAGATAG

Coding sequence (CDS)

ATGGATGTTGTTACTCAAAGAAACTCCTCTTCCTCCGTTTCCATGTTGAATCCCAACGCTCCTTTGTTCGTTCCCATGGCCTATAGAACGGTGGAGGATTTCTCCGACCAGTGGTGGGAGCTCATCCAGTCCTCCCCCTGGTTCCGTGAGTACTGGCTTCAAGAACGCTTTCAAGATCCTCAAAATGAACTTTCTTTTGGTGAAAATGAAGAATTCATCCTTCCGGATCTTGAAAGTTTCTTCGACGACTTCACTCGTCAACAGGAAGAGGAAGAATTGGAATTCTCGAAGGATTTAGTTCCAATGGGTGCTTTCAAATGGCAGAAGGCTCGGTCTGGAGCGGAGGTTCCTAAGTATGCTCAAAAGGCTCCCAAGATTGTGAACGTGAAAGTGAGTCCGAGAACGATTCACCAACCGAGATAG

Protein sequence

MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDPQNELSFGENEEFILPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYAQKAPKIVNVKVSPRTIHQPR
Homology
[Close]
BLAST of CsaV3_6G002060 vs. NCBI nr
Match: KGN45812.1 (Poly(A)-binding protein C-terminal interacting protein 6 [Cucumis sativus])

HSP 1 Score: 287.3 bits (734), Expect = 2.7e-74
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0 

Query: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDP 60
           MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDP
Sbjct: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDP 60

Query: 61  QNELSFGENEEFILPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA 120
           QNELSFGENEEFILPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA
Sbjct: 61  QNELSFGENEEFILPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA 120

Query: 121 QKAPKIVNVKVSPRTIHQPR 141
           QKAPKIVNVKVSPRTIHQPR
Sbjct: 121 QKAPKIVNVKVSPRTIHQPR 140

[Close]
BLAST of CsaV3_6G002060 vs. NCBI nr
Match: NP_001295813.1 (protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucumis sativus] >AAQ18141.1 poly(A)-binding protein C-terminal interacting protein 6 [Cucumis sativus])

HSP 1 Score: 269.6 bits (688), Expect = 5.9e-69
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDP 60
           MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDP
Sbjct: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDP 60

Query: 61  QNELSFGENEEFILPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA 120
           QNELSFGENEEFILPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA
Sbjct: 61  QNELSFGENEEFILPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA 120

Query: 121 QKAPKIVNVKVS 133
           QKAPKIVNVKVS
Sbjct: 121 QKAPKIVNVKVS 132

[Close]
BLAST of CsaV3_6G002060 vs. NCBI nr
Match: XP_022990060.1 (protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita maxima])

HSP 1 Score: 256.9 bits (655), Expect = 4.0e-65
Identity = 122/140 (87.14%), Postives = 129/140 (92.14%), Query Frame = 0 

Query: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDP 60
           MDVV +R SSSSVSMLNPNAPLFVPMAYRTVEDFSDQWW LIQSSPWFREYWLQERFQDP
Sbjct: 1   MDVVARRTSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWNLIQSSPWFREYWLQERFQDP 60

Query: 61  QNELSFGENEEFILPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA 120
           QN+ SF ENEE +LPDLE+ FDD  RQQEEEE EFSKDLVPMGAFKW KA++GAEVP+YA
Sbjct: 61  QNDFSFAENEEIVLPDLENIFDDLARQQEEEEFEFSKDLVPMGAFKWHKAQTGAEVPRYA 120

Query: 121 QKAPKIVNVKVSPRTIHQPR 141
           QKAPKIVNVKVSPRTIHQPR
Sbjct: 121 QKAPKIVNVKVSPRTIHQPR 140

[Close]
BLAST of CsaV3_6G002060 vs. NCBI nr
Match: XP_022992587.1 (protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita maxima])

HSP 1 Score: 256.5 bits (654), Expect = 5.2e-65
Identity = 122/140 (87.14%), Postives = 131/140 (93.57%), Query Frame = 0 

Query: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDP 60
           MDVV   NSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWW+LIQSSPWFREYWLQERFQDP
Sbjct: 1   MDVVALTNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWDLIQSSPWFREYWLQERFQDP 60

Query: 61  QNELSFGENEEFILPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA 120
           QN+LSF EN+E +LPDLE+F +DF  QQEEEELEFSKDLVPMGAFKW KAR+GAEVP+YA
Sbjct: 61  QNDLSFAENDEIVLPDLENFLEDFACQQEEEELEFSKDLVPMGAFKWHKARTGAEVPRYA 120

Query: 121 QKAPKIVNVKVSPRTIHQPR 141
           QKAPKIVNVKV+PRTIHQPR
Sbjct: 121 QKAPKIVNVKVTPRTIHQPR 140

[Close]
BLAST of CsaV3_6G002060 vs. NCBI nr
Match: XP_022939236.1 (protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita moschata])

HSP 1 Score: 255.0 bits (650), Expect = 1.5e-64
Identity = 122/140 (87.14%), Postives = 131/140 (93.57%), Query Frame = 0 

Query: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDP 60
           MDVV   NSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWW+LIQSSPWFREYWLQERFQDP
Sbjct: 1   MDVVALTNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWDLIQSSPWFREYWLQERFQDP 60

Query: 61  QNELSFGENEEFILPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA 120
           QN+LSF EN+E +LPDLE+F +DF  QQEEEELEFSKDLVPMGAFKW KAR+GAEVP+YA
Sbjct: 61  QNDLSFLENDEIVLPDLENFLEDFACQQEEEELEFSKDLVPMGAFKWHKARTGAEVPRYA 120

Query: 121 QKAPKIVNVKVSPRTIHQPR 141
           QKAPKIVNVKV+PRTIHQPR
Sbjct: 121 QKAPKIVNVKVTPRTIHQPR 140

[Close]
BLAST of CsaV3_6G002060 vs. TAIR10
Match: AT2G41430.1 (dehydration-induced protein (ERD15))

HSP 1 Score: 82.8 bits (203), Expect = 1.9e-16
Identity = 56/156 (35.90%), Postives = 76/156 (48.72%), Query Frame = 0 

Query: 14  SMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDPQNELSFGEN---- 73
           S LNP+APLF+P A R VEDFS +WW+L+ +S W+ +YW+ ++ Q        GEN    
Sbjct: 9   STLNPDAPLFIPAAVRQVEDFSPEWWQLVTTSTWYPDYWISQQQQGADGFYDNGENENGG 68

Query: 74  ----------EEFILPDLESFFDDFTRQ-----------QEEEELEFSK--DLVPMGAFK 133
                     E F   D+E FFD    +           Q   E  F K  ++V   +  
Sbjct: 69  GHIDVADLLPESFDFDDMEDFFDTDAAEFDQGFDGRMYYQAPSEFGFGKNGEMVKKSSGN 128

Query: 134 WQKARSGAEVPKYAQKAPKIVNVKV--SPRTIHQPR 141
            +  RS  E  KYA+K  K  N +V  +PR IHQPR
Sbjct: 129 -RSPRSIVEPAKYAEKPAKWGNQRVAAAPRNIHQPR 163

[Close]
BLAST of CsaV3_6G002060 vs. TAIR10
Match: AT4G14270.1 (Protein containing PAM2 motif which mediates interaction with the PABC domain of polyadenyl binding proteins.)

HSP 1 Score: 67.0 bits (162), Expect = 1.1e-11
Identity = 48/140 (34.29%), Postives = 72/140 (51.43%), Query Frame = 0 

Query: 13  VSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDPQNELSFGEN--- 72
           +S LNPNAP+F P+ +R VEDFS +WW+L+ +S WFR++WL     + +NE   G++   
Sbjct: 9   LSTLNPNAPVFDPVEFREVEDFSPKWWDLVTTSKWFRDFWLS---ANSENEFLGGDDFSV 68

Query: 73  --EEF----ILPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYAQKA 132
             EEF       D  S  D  T       L+   ++      K  +++  +  PKY QK 
Sbjct: 69  MEEEFEEMIASSDGGSMADTVTEADVASYLKMLLNIAESTKEKIYRSKVSSCSPKYNQK- 128

Query: 133 PKIVNVKVSPRT---IHQPR 141
            K +N   + R    I+QPR
Sbjct: 129 -KYMNPNFNCRRNHHIYQPR 143

[Close]
BLAST of CsaV3_6G002060 vs. Swiss-Prot
Match: sp|Q39096|ERD15_ARATH (Protein EARLY RESPONSIVE TO DEHYDRATION 15 OS=Arabidopsis thaliana OX=3702 GN=ERD15 PE=1 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 3.3e-15
Identity = 56/156 (35.90%), Postives = 76/156 (48.72%), Query Frame = 0 

Query: 14  SMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDPQNELSFGEN---- 73
           S LNP+APLF+P A R VEDFS +WW+L+ +S W+ +YW+ ++ Q        GEN    
Sbjct: 9   STLNPDAPLFIPAAVRQVEDFSPEWWQLVTTSTWYPDYWISQQQQGADGFYDNGENENGG 68

Query: 74  ----------EEFILPDLESFFDDFTRQ-----------QEEEELEFSK--DLVPMGAFK 133
                     E F   D+E FFD    +           Q   E  F K  ++V   +  
Sbjct: 69  GHIDVADLLPESFDFDDMEDFFDTDAAEFDQGFDGRMYYQAPSEFGFGKNGEMVKKSSGN 128

Query: 134 WQKARSGAEVPKYAQKAPKIVNVKV--SPRTIHQPR 141
            +  RS  E  KYA+K  K  N +V  +PR IHQPR
Sbjct: 129 -RSPRSIVEPAKYAEKPAKWGNQRVAAAPRNIHQPR 163

[Close]
BLAST of CsaV3_6G002060 vs. Swiss-Prot
Match: sp|Q94AR4|CID2_ARATH (Polyadenylate-binding protein-interacting protein 2 OS=Arabidopsis thaliana OX=3702 GN=CID2 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.9e-10
Identity = 48/140 (34.29%), Postives = 72/140 (51.43%), Query Frame = 0 

Query: 13  VSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDPQNELSFGEN--- 72
           +S LNPNAP+F P+ +R VEDFS +WW+L+ +S WFR++WL     + +NE   G++   
Sbjct: 9   LSTLNPNAPVFDPVEFREVEDFSPKWWDLVTTSKWFRDFWLS---ANSENEFLGGDDFSV 68

Query: 73  --EEF----ILPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYAQKA 132
             EEF       D  S  D  T       L+   ++      K  +++  +  PKY QK 
Sbjct: 69  MEEEFEEMIASSDGGSMADTVTEADVASYLKMLLNIAESTKEKIYRSKVSSCSPKYNQK- 128

Query: 133 PKIVNVKVSPRT---IHQPR 141
            K +N   + R    I+QPR
Sbjct: 129 -KYMNPNFNCRRNHHIYQPR 143

[Close]
BLAST of CsaV3_6G002060 vs. TrEMBL
Match: tr|A0A0A0KBP8|A0A0A0KBP8_CUCSA (Poly(A)-binding protein C-terminal interacting protein 6 OS=Cucumis sativus OX=3659 GN=Csa_6G013350 PE=4 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 1.8e-74
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0 

Query: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDP 60
           MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDP
Sbjct: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDP 60

Query: 61  QNELSFGENEEFILPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA 120
           QNELSFGENEEFILPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA
Sbjct: 61  QNELSFGENEEFILPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA 120

Query: 121 QKAPKIVNVKVSPRTIHQPR 141
           QKAPKIVNVKVSPRTIHQPR
Sbjct: 121 QKAPKIVNVKVSPRTIHQPR 140

[Close]
BLAST of CsaV3_6G002060 vs. TrEMBL
Match: tr|Q6ELF9|Q6ELF9_CUCSA (Poly(A)-binding protein C-terminal interacting protein 6 OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 3.9e-69
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDP 60
           MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDP
Sbjct: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDP 60

Query: 61  QNELSFGENEEFILPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA 120
           QNELSFGENEEFILPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA
Sbjct: 61  QNELSFGENEEFILPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA 120

Query: 121 QKAPKIVNVKVS 133
           QKAPKIVNVKVS
Sbjct: 121 QKAPKIVNVKVS 132

[Close]
BLAST of CsaV3_6G002060 vs. TrEMBL
Match: tr|A0A2P4HGR7|A0A2P4HGR7_QUESU (Protein early responsive to dehydration 15 OS=Quercus suber OX=58331 GN=CFP56_45815 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 4.6e-46
Identity = 96/142 (67.61%), Postives = 116/142 (81.69%), Query Frame = 0 

Query: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDP 60
           M+V++QR SSS+   LNPNAPLFVP+AYRTVEDFSD+WWEL+QSSPWFREYWLQERFQDP
Sbjct: 28  MEVISQRTSSST---LNPNAPLFVPLAYRTVEDFSDEWWELVQSSPWFREYWLQERFQDP 87

Query: 61  QNELSFGENEEFILP-DLESFFDD-FTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPK 120
           QN+  F +  + +LP D+++ FDD +  Q EEEE  F KDLV +G  KW KAR+ A+VP+
Sbjct: 88  QNDPFFPDIHDPVLPDDIDALFDDYYVDQHEEEERNFCKDLVSIGTLKWPKARALAKVPR 147

Query: 121 YAQKAPKIVNVKVSPRTIHQPR 141
           Y +KAPKIVNVKVSPRTI QPR
Sbjct: 148 YMEKAPKIVNVKVSPRTIQQPR 166

[Close]
BLAST of CsaV3_6G002060 vs. TrEMBL
Match: tr|W9QXE6|W9QXE6_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_012280 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 2.6e-41
Identity = 88/143 (61.54%), Postives = 111/143 (77.62%), Query Frame = 0 

Query: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDP 60
           MDV++ R+SSSS S LNPNAP+FVP+AYRTVEDFSD+WW L+QSSPWFR+YWLQER+ DP
Sbjct: 3   MDVISGRSSSSS-STLNPNAPMFVPLAYRTVEDFSDEWWALVQSSPWFRDYWLQERYCDP 62

Query: 61  QNELSFGENEEFILPDLESFFDD---FTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVP 120
           Q + SF +  +  L D++SFFDD     + +EE E ++SK LV +GA KW+K R+ AE P
Sbjct: 63  QTDPSFFDIYDLALLDVDSFFDDDVSSMKTEEEGERDYSKKLVRLGALKWRKGRALAEAP 122

Query: 121 KYAQKAPKIVNVKVSPRTIHQPR 141
           +Y +K PKIV VK SPRTI QPR
Sbjct: 123 RYIEKVPKIVKVKPSPRTIQQPR 144

[Close]
BLAST of CsaV3_6G002060 vs. TrEMBL
Match: tr|A0A2P5ECJ3|A0A2P5ECJ3_9ROSA (Ataxin-2, C-terminal OS=Trema orientalis OX=63057 GN=TorRG33x02_209600 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 3.4e-41
Identity = 90/141 (63.83%), Postives = 113/141 (80.14%), Query Frame = 0 

Query: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDP 60
           M+V++ R++SSS S LNPNAP+FVP+AYRTVEDFSD+WW L+QSSPWFR+YWLQERF DP
Sbjct: 3   MEVISGRSTSSS-STLNPNAPMFVPLAYRTVEDFSDEWWALVQSSPWFRDYWLQERFCDP 62

Query: 61  QNELSFGENEEFILPDLES-FFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKY 120
           Q + SF +  +  LPD++S  FDD   ++EE E + SKDLV MGA KW+KAR+ AE P+Y
Sbjct: 63  QTDPSFLDIYDPALPDVDSLLFDD--NEEEEVERDSSKDLVRMGAVKWRKARAPAEAPRY 122

Query: 121 AQKAPKIVNVKVSPRTIHQPR 141
            +KAPKIV  K+SPRTI QPR
Sbjct: 123 IEKAPKIVKPKLSPRTIQQPR 140

The following BLAST results are available for this feature:
BLAST of CsaV3_6G002060 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN45812.12.7e-74100.00Poly(A)-binding protein C-terminal interacting protein 6 [Cucumis sativus][more]
NP_001295813.15.9e-69100.00protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucumis sativus] >AAQ18141.1 po... [more]
XP_022990060.14.0e-6587.14protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita maxima][more]
XP_022992587.15.2e-6587.14protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita maxima][more]
XP_022939236.11.5e-6487.14protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita moschata][more]
BLAST of CsaV3_6G002060 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G41430.11.9e-1635.90dehydration-induced protein (ERD15)[more]
AT4G14270.11.1e-1134.29Protein containing PAM2 motif which mediates interaction with the PABC domain of... [more]
BLAST of CsaV3_6G002060 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q39096|ERD15_ARATH3.3e-1535.90Protein EARLY RESPONSIVE TO DEHYDRATION 15 OS=Arabidopsis thaliana OX=3702 GN=ER... [more]
sp|Q94AR4|CID2_ARATH1.9e-1034.29Polyadenylate-binding protein-interacting protein 2 OS=Arabidopsis thaliana OX=3... [more]
BLAST of CsaV3_6G002060 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KBP8|A0A0A0KBP8_CUCSA1.8e-74100.00Poly(A)-binding protein C-terminal interacting protein 6 OS=Cucumis sativus OX=3... [more]
tr|Q6ELF9|Q6ELF9_CUCSA3.9e-69100.00Poly(A)-binding protein C-terminal interacting protein 6 OS=Cucumis sativus OX=3... [more]
tr|A0A2P4HGR7|A0A2P4HGR7_QUESU4.6e-4667.61Protein early responsive to dehydration 15 OS=Quercus suber OX=58331 GN=CFP56_45... [more]
tr|W9QXE6|W9QXE6_9ROSA2.6e-4161.54Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_012280 PE=4 SV=1[more]
tr|A0A2P5ECJ3|A0A2P5ECJ3_9ROSA3.4e-4163.83Ataxin-2, C-terminal OS=Trema orientalis OX=63057 GN=TorRG33x02_209600 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G002060.1CsaV3_6G002060.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33790:SF6SUBFAMILY NOT NAMEDcoord: 7..93
NoneNo IPR availablePANTHERPTHR33790FAMILY NOT NAMEDcoord: 7..93

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_6G002060CSPI06G01910Wild cucumber (PI 183967)cpicucB364
CsaV3_6G002060Cucsa.136830Cucumber (Gy14) v1cgycucB203
CsaV3_6G002060CmaCh15G001480Cucurbita maxima (Rimu)cmacucB0363
CsaV3_6G002060CmaCh04G028850Cucurbita maxima (Rimu)cmacucB0906
CsaV3_6G002060CmoCh04G030100Cucurbita moschata (Rifu)cmocucB0899
CsaV3_6G002060Cp4.1LG13g07330Cucurbita pepo (Zucchini)cpecucB0238
CsaV3_6G002060Cp4.1LG01g21820Cucurbita pepo (Zucchini)cpecucB0569
CsaV3_6G002060Carg05958Silver-seed gourdcarcucB0024
CsaV3_6G002060Carg02140Silver-seed gourdcarcucB0300
CsaV3_6G002060Cla006610Watermelon (97103) v1cucwmB558
CsaV3_6G002060MELO3C019981Melon (DHL92) v3.5.1cucmeB487
CsaV3_6G002060ClCG11G005940Watermelon (Charleston Gray)cucwcgB452
CsaV3_6G002060Lsi03G002860Bottle gourd (USVL1VR-Ls)cuclsiB473
CsaV3_6G002060MELO3C019981.2Melon (DHL92) v3.6.1cucmedB473
CsaV3_6G002060Cla97C11G212840Watermelon (97103) v2cucwmbB441
CsaV3_6G002060Bhi04G001863Wax gourdcucwgoB605
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_6G002060Watermelon (97103) v2cucwmbB476
CsaV3_6G002060Watermelon (97103) v2cucwmbB500
CsaV3_6G002060Wax gourdcucwgoB646
CsaV3_6G002060Cucumber (Chinese Long) v3cuccucB179
CsaV3_6G002060Cucumber (Chinese Long) v3cuccucB203
CsaV3_6G002060Silver-seed gourdcarcucB0594
CsaV3_6G002060Silver-seed gourdcarcucB0711
CsaV3_6G002060Cucumber (Gy14) v2cgybcucB189
CsaV3_6G002060Cucumber (Gy14) v2cgybcucB242
CsaV3_6G002060Cucumber (Gy14) v2cgybcucB298
CsaV3_6G002060Cucumber (Gy14) v1cgycucB187
CsaV3_6G002060Cucumber (Gy14) v1cgycucB218
CsaV3_6G002060Cucurbita maxima (Rimu)cmacucB0811
CsaV3_6G002060Cucurbita maxima (Rimu)cmacucB0912
CsaV3_6G002060Cucurbita maxima (Rimu)cmacucB0913
CsaV3_6G002060Cucurbita moschata (Rifu)cmocucB0358
CsaV3_6G002060Cucurbita moschata (Rifu)cmocucB0795
CsaV3_6G002060Cucurbita moschata (Rifu)cmocucB0903
CsaV3_6G002060Cucurbita pepo (Zucchini)cpecucB0094
CsaV3_6G002060Cucurbita pepo (Zucchini)cpecucB0574
CsaV3_6G002060Wild cucumber (PI 183967)cpicucB240
CsaV3_6G002060Bottle gourd (USVL1VR-Ls)cuclsiB459
CsaV3_6G002060Bottle gourd (USVL1VR-Ls)cuclsiB487
CsaV3_6G002060Melon (DHL92) v3.5.1cucmeB465
CsaV3_6G002060Melon (DHL92) v3.5.1cucmeB525
CsaV3_6G002060Watermelon (Charleston Gray)cucwcgB488
CsaV3_6G002060Watermelon (Charleston Gray)cucwcgB510
CsaV3_6G002060Watermelon (97103) v1cucwmB508
CsaV3_6G002060Watermelon (97103) v1cucwmB511
CsaV3_6G002060Watermelon (97103) v1cucwmB533