CmaCh15G001480 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh15G001480
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Polyadenylate-binding-interacting protein 2-like protein
Location	Cma_Chr15 : 694620 .. 695889 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATTCACTTTTTCTTTTTTATATATTTCATCCCACGCTTTGGGTAAACAATTCGTCTTCAACTTCAAGCTTCTATTCAGTTTTCCACAGAGCTTAAGCAAGCAGTGGCTATGGATGTGGTTGCTCTAACAAATTCGTCGTCTTCCGTTTCCATGTTGAATCCTAACGCTCCATTGTTCGTTCCGATGGCCTACAGGACGGTGGAGGATTTCTCCGACCAGTGGTGGGATCTCATCCAGTCGTCGCCGTGGTTTCGTGAGTACTGGCTTCAAGAGCGCTTTCAAGATCCTCAAAACGATCTTTCATTTGCAGAAAATGATGAAATTGTCCTTCCGGATCTCGAGAATTTCCTCGAGGACTTCGCTTGTCAACGTAAGATCTCAAATCGAGTCAAGTTTTTCCCGTCTCTTAATCGAGCTCACTAATCTGTTGTTTCTTCTGATTTCTTCTGCAGAGGAAGAGGAGGAATTGGAGTTTTCCAAGGATTTGGTTCCAATGGGAGCGTTCAAATGGCATAAGGCTCGAACTGGAGCGGAGGTTCCTAGGTATGCTCAAAAGGCCCCCAAAATCGTGAACGTGAAAGTGACTCCGAGGACGATTCACCAACCGCGATAGACTCAACGAGGAATCTCCAACTCATCGAGTACGTTTCTTCATCAGAACTCGGGAACCATTTTAAATTGTTGTTGATCTAGGTTCTCCACATGGTTGTTTATGTACAGAGGCTAGAACTTGATCTGTTCAAATTTAGCTCTGTTTGTCTGTGTTTAGTTGATGTAAATTTGTACCTAGTCTCACTTTCGTTTCCGAAAGAATCTAGATATTAATGTTGTTGACTTCATAGCCTTGCCATAGAATTGCAATTACGCTAATTTTCTGAAGAACTTTGAGAATAAAGAACTATCCTAAAGGGGGCCTCATTGCCTTGAGCATTATGAAAACTTGAACCATTTGATGAGACATTGAACACAGAGCTTAGGTTTTCTTGATGCACTCCACTCCTGACAATGCAAACAGACCTTCAATTCCACCACATATAGCCAGAAAACCAAGACCCATTAGCATTATGAAATCCTCCGATTCCAAGAATTTCTGGTTCTGAAATGCTTGCATTAGCCATTCTGATCAATTCCTGATCCAAATGCATGAATCTGAGGAGTGTAAAGGGAATAAAAGGGCTTCTGCCTCAAGAAGGAATTGGATTCATTCATTCATTCATTCATTCATTCATTCCTTTGAGCTCAAAAAAGCAGAGATTCTTTGAGTGGGGT

mRNA sequence

TATTCACTTTTTCTTTTTTATATATTTCATCCCACGCTTTGGGTAAACAATTCGTCTTCAACTTCAAGCTTCTATTCAGTTTTCCACAGAGCTTAAGCAAGCAGTGGCTATGGATGTGGTTGCTCTAACAAATTCGTCGTCTTCCGTTTCCATGTTGAATCCTAACGCTCCATTGTTCGTTCCGATGGCCTACAGGACGGTGGAGGATTTCTCCGACCAGTGGTGGGATCTCATCCAGTCGTCGCCGTGGTTTCGTGAGTACTGGCTTCAAGAGCGCTTTCAAGATCCTCAAAACGATCTTTCATTTGCAGAAAATGATGAAATTGTCCTTCCGGATCTCGAGAATTTCCTCGAGGACTTCGCTTGTCAACAGGAAGAGGAGGAATTGGAGTTTTCCAAGGATTTGGTTCCAATGGGAGCGTTCAAATGGCATAAGGCTCGAACTGGAGCGGAGGTTCCTAGGTATGCTCAAAAGGCCCCCAAAATCGTGAACGTGAAAGTGACTCCGAGGACGATTCACCAACCGCGATAGACTCAACGAGGAATCTCCAACTCATCGAGTACGTTTCTTCATCAGAACTCGGGAACCATTTTAAATTGTTGTTGATCTAGGTTCTCCACATGGTTGTTTATGTACAGAGGCTAGAACTTGATCTGTTCAAATTTAGCTCTGTTTGTCTGTGTTTAGTTGATGTAAATTTGTACCTAGTCTCACTTTCGTTTCCGAAAGAATCTAGATATTAATGTTGTTGACTTCATAGCCTTGCCATAGAATTGCAATTACGCTAATTTTCTGAAGAACTTTGAGAATAAAGAACTATCCTAAAGGGGGCCTCATTGCCTTGAGCATTATGAAAACTTGAACCATTTGATGAGACATTGAACACAGAGCTTAGGTTTTCTTGATGCACTCCACTCCTGACAATGCAAACAGACCTTCAATTCCACCACATATAGCCAGAAAACCAAGACCCATTAGCATTATGAAATCCTCCGATTCCAAGAATTTCTGGTTCTGAAATGCTTGCATTAGCCATTCTGATCAATTCCTGATCCAAATGCATGAATCTGAGGAGTGTAAAGGGAATAAAAGGGCTTCTGCCTCAAGAAGGAATTGGATTCATTCATTCATTCATTCATTCATTCATTCCTTTGAGCTCAAAAAAGCAGAGATTCTTTGAGTGGGGT

Coding sequence (CDS)

ATGGATGTGGTTGCTCTAACAAATTCGTCGTCTTCCGTTTCCATGTTGAATCCTAACGCTCCATTGTTCGTTCCGATGGCCTACAGGACGGTGGAGGATTTCTCCGACCAGTGGTGGGATCTCATCCAGTCGTCGCCGTGGTTTCGTGAGTACTGGCTTCAAGAGCGCTTTCAAGATCCTCAAAACGATCTTTCATTTGCAGAAAATGATGAAATTGTCCTTCCGGATCTCGAGAATTTCCTCGAGGACTTCGCTTGTCAACAGGAAGAGGAGGAATTGGAGTTTTCCAAGGATTTGGTTCCAATGGGAGCGTTCAAATGGCATAAGGCTCGAACTGGAGCGGAGGTTCCTAGGTATGCTCAAAAGGCCCCCAAAATCGTGAACGTGAAAGTGACTCCGAGGACGATTCACCAACCGCGATAG

Protein sequence

MDVVALTNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWDLIQSSPWFREYWLQERFQDPQNDLSFAENDEIVLPDLENFLEDFACQQEEEELEFSKDLVPMGAFKWHKARTGAEVPRYAQKAPKIVNVKVTPRTIHQPR

Homology

[Close]

BLAST of CmaCh15G001480 vs. Swiss-Prot
Match: ERD15_ARATH (Protein EARLY RESPONSIVE TO DEHYDRATION 15 OS=Arabidopsis thaliana GN=ERD15 PE=1 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.5e-12
Identity = 51/155 (32.90%), Postives = 76/155 (49.03%), Query Frame = 1


Query: 14  SMLNPNAPLFVPMAYRTVEDFSDQWWDLIQSSPWFREYWLQERFQDPQNDLSFAENDE-- 73
           S LNP+APLF+P A R VEDFS +WW L+ +S W+ +YW+ ++ Q         EN+   
Sbjct: 9   STLNPDAPLFIPAAVRQVEDFSPEWWQLVTTSTWYPDYWISQQQQGADGFYDNGENENGG 68

Query: 74  ------IVLP------DLENFLEDFACQ-----------QEEEELEFSKDLVPMGAFKWH 133
                  +LP      D+E+F +  A +           Q   E  F K+   +     +
Sbjct: 69  GHIDVADLLPESFDFDDMEDFFDTDAAEFDQGFDGRMYYQAPSEFGFGKNGEMVKKSSGN 128

Query: 134 KA-RTGAEVPRYAQKAPKIVNVKV--TPRTIHQPR 141
           ++ R+  E  +YA+K  K  N +V   PR IHQPR
Sbjct: 129 RSPRSIVEPAKYAEKPAKWGNQRVAAAPRNIHQPR 163

[Close]

BLAST of CmaCh15G001480 vs. Swiss-Prot
Match: CID2_ARATH (Polyadenylate-binding protein-interacting protein 2 OS=Arabidopsis thaliana GN=CID2 PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 5.4e-10
Identity = 43/137 (31.39%), Postives = 72/137 (52.55%), Query Frame = 1


Query: 13  VSMLNPNAPLFVPMAYRTVEDFSDQWWDLIQSSPWFREYWLQERFQDP---QNDLSFAEN 72
           +S LNPNAP+F P+ +R VEDFS +WWDL+ +S WFR++WL    ++     +D S  E 
Sbjct: 9   LSTLNPNAPVFDPVEFREVEDFSPKWWDLVTTSKWFRDFWLSANSENEFLGGDDFSVMEE 68

Query: 73  --DEIVLPDLENFLEDFACQQE-EEELEFSKDLVPMGAFKWHKARTGAEVPRYAQKAPKI 132
             +E++       + D   + +    L+   ++      K ++++  +  P+Y QK  K 
Sbjct: 69  EFEEMIASSDGGSMADTVTEADVASYLKMLLNIAESTKEKIYRSKVSSCSPKYNQK--KY 128

Query: 133 VNVKVTPRT---IHQPR 141
           +N     R    I+QPR
Sbjct: 129 MNPNFNCRRNHHIYQPR 143

[Close]

BLAST of CmaCh15G001480 vs. TrEMBL
Match: A0A0A0KBP8_CUCSA (Poly(A)-binding protein C-terminal interacting protein 6 OS=Cucumis sativus GN=Csa_6G013350 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 1.4e-65
Identity = 122/140 (87.14%), Postives = 131/140 (93.57%), Query Frame = 1


Query: 1   MDVVALTNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWDLIQSSPWFREYWLQERFQDP 60
           MDVV   NSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWW+LIQSSPWFREYWLQERFQDP
Sbjct: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDP 60

Query: 61  QNDLSFAENDEIVLPDLENFLEDFACQQEEEELEFSKDLVPMGAFKWHKARTGAEVPRYA 120
           QN+LSF EN+E +LPDLE+F +DF  QQEEEELEFSKDLVPMGAFKW KAR+GAEVP+YA
Sbjct: 61  QNELSFGENEEFILPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA 120

Query: 121 QKAPKIVNVKVTPRTIHQPR 141
           QKAPKIVNVKV+PRTIHQPR
Sbjct: 121 QKAPKIVNVKVSPRTIHQPR 140

[Close]

BLAST of CmaCh15G001480 vs. TrEMBL
Match: Q6ELF9_CUCSA (Poly(A)-binding protein C-terminal interacting protein 6 OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 1.8e-60
Identity = 114/132 (86.36%), Postives = 123/132 (93.18%), Query Frame = 1


Query: 1   MDVVALTNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWDLIQSSPWFREYWLQERFQDP 60
           MDVV   NSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWW+LIQSSPWFREYWLQERFQDP
Sbjct: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDP 60

Query: 61  QNDLSFAENDEIVLPDLENFLEDFACQQEEEELEFSKDLVPMGAFKWHKARTGAEVPRYA 120
           QN+LSF EN+E +LPDLE+F +DF  QQEEEELEFSKDLVPMGAFKW KAR+GAEVP+YA
Sbjct: 61  QNELSFGENEEFILPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA 120

Query: 121 QKAPKIVNVKVT 133
           QKAPKIVNVKV+
Sbjct: 121 QKAPKIVNVKVS 132

[Close]

BLAST of CmaCh15G001480 vs. TrEMBL
Match: V4SMQ7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033013mg PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 7.8e-40
Identity = 83/140 (59.29%), Postives = 106/140 (75.71%), Query Frame = 1


Query: 1   MDVVALTNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWDLIQSSPWFREYWLQERFQDP 60
           M+V++  +SSSS S LNPNAP+F+P AYR VEDFSD+WW LIQSSPWFR+YWLQE + DP
Sbjct: 5   MEVLSQRSSSSSTSTLNPNAPMFIPFAYRMVEDFSDEWWALIQSSPWFRDYWLQECYFDP 64

Query: 61  QNDLSFAENDEIVLPDLENFLEDFACQQEEEELEFSKDLVPMGAFKWHKARTGAEVPRYA 120
           Q+D  F++ D++VLPD++    D   Q+E EE +F KDLV +G  KW K     E  RY+
Sbjct: 65  QSDPLFSDFDDLVLPDVDEIFPD-KHQEEMEERDFCKDLVSLGTLKWKKGGAMIEKQRYS 124

Query: 121 QKAPKIVNVKVTPRTIHQPR 141
           +KAPKIV+VKV+PRTI QPR
Sbjct: 125 EKAPKIVSVKVSPRTIQQPR 143

[Close]

BLAST of CmaCh15G001480 vs. TrEMBL
Match: A0A067E1T5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032323mg PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 1.0e-39
Identity = 83/140 (59.29%), Postives = 106/140 (75.71%), Query Frame = 1


Query: 1   MDVVALTNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWDLIQSSPWFREYWLQERFQDP 60
           M+V++  +SSSS S LNPNAP+F+P AYR VEDFSD+WW LIQSSPWFR+YWLQE + DP
Sbjct: 5   MEVLSQRSSSSSTSTLNPNAPMFIPFAYRMVEDFSDEWWALIQSSPWFRDYWLQECYFDP 64

Query: 61  QNDLSFAENDEIVLPDLENFLEDFACQQEEEELEFSKDLVPMGAFKWHKARTGAEVPRYA 120
           Q+D  F++ D++VLPD++    D   Q+E EE +F KDLV +G  KW K     E  RY+
Sbjct: 65  QSDPLFSDFDDLVLPDVDEIFPD-KHQEEIEERDFCKDLVSLGTLKWKKGGAMIEKQRYS 124

Query: 121 QKAPKIVNVKVTPRTIHQPR 141
           +KAPKIV+VKV+PRTI QPR
Sbjct: 125 EKAPKIVSVKVSPRTIQQPR 143

[Close]

BLAST of CmaCh15G001480 vs. TrEMBL
Match: W9QXE6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_012280 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 1.7e-39
Identity = 85/143 (59.44%), Postives = 107/143 (74.83%), Query Frame = 1


Query: 1   MDVVALTNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWDLIQSSPWFREYWLQERFQDP 60
           MDV++  +SSSS S LNPNAP+FVP+AYRTVEDFSD+WW L+QSSPWFR+YWLQER+ DP
Sbjct: 3   MDVISGRSSSSS-STLNPNAPMFVPLAYRTVEDFSDEWWALVQSSPWFRDYWLQERYCDP 62

Query: 61  QNDLSFAENDEIVLPDLENFLEDFACQ---QEEEELEFSKDLVPMGAFKWHKARTGAEVP 120
           Q D SF +  ++ L D+++F +D       +EE E ++SK LV +GA KW K R  AE P
Sbjct: 63  QTDPSFFDIYDLALLDVDSFFDDDVSSMKTEEEGERDYSKKLVRLGALKWRKGRALAEAP 122

Query: 121 RYAQKAPKIVNVKVTPRTIHQPR 141
           RY +K PKIV VK +PRTI QPR
Sbjct: 123 RYIEKVPKIVKVKPSPRTIQQPR 144

[Close]

BLAST of CmaCh15G001480 vs. TAIR10
Match: AT2G41430.1 (AT2G41430.1 dehydration-induced protein (ERD15))

HSP 1 Score: 73.9 bits (180), Expect = 8.6e-14
Identity = 51/155 (32.90%), Postives = 76/155 (49.03%), Query Frame = 1


Query: 14  SMLNPNAPLFVPMAYRTVEDFSDQWWDLIQSSPWFREYWLQERFQDPQNDLSFAENDE-- 73
           S LNP+APLF+P A R VEDFS +WW L+ +S W+ +YW+ ++ Q         EN+   
Sbjct: 9   STLNPDAPLFIPAAVRQVEDFSPEWWQLVTTSTWYPDYWISQQQQGADGFYDNGENENGG 68

Query: 74  ------IVLP------DLENFLEDFACQ-----------QEEEELEFSKDLVPMGAFKWH 133
                  +LP      D+E+F +  A +           Q   E  F K+   +     +
Sbjct: 69  GHIDVADLLPESFDFDDMEDFFDTDAAEFDQGFDGRMYYQAPSEFGFGKNGEMVKKSSGN 128

Query: 134 KA-RTGAEVPRYAQKAPKIVNVKV--TPRTIHQPR 141
           ++ R+  E  +YA+K  K  N +V   PR IHQPR
Sbjct: 129 RSPRSIVEPAKYAEKPAKWGNQRVAAAPRNIHQPR 163

[Close]

BLAST of CmaCh15G001480 vs. TAIR10
Match: AT4G14270.1 (AT4G14270.1 Protein containing PAM2 motif which mediates interaction with the PABC domain of polyadenyl binding proteins.)

HSP 1 Score: 65.5 bits (158), Expect = 3.0e-11
Identity = 43/137 (31.39%), Postives = 72/137 (52.55%), Query Frame = 1


Query: 13  VSMLNPNAPLFVPMAYRTVEDFSDQWWDLIQSSPWFREYWLQERFQDP---QNDLSFAEN 72
           +S LNPNAP+F P+ +R VEDFS +WWDL+ +S WFR++WL    ++     +D S  E 
Sbjct: 9   LSTLNPNAPVFDPVEFREVEDFSPKWWDLVTTSKWFRDFWLSANSENEFLGGDDFSVMEE 68

Query: 73  --DEIVLPDLENFLEDFACQQE-EEELEFSKDLVPMGAFKWHKARTGAEVPRYAQKAPKI 132
             +E++       + D   + +    L+   ++      K ++++  +  P+Y QK  K 
Sbjct: 69  EFEEMIASSDGGSMADTVTEADVASYLKMLLNIAESTKEKIYRSKVSSCSPKYNQK--KY 128

Query: 133 VNVKVTPRT---IHQPR 141
           +N     R    I+QPR
Sbjct: 129 MNPNFNCRRNHHIYQPR 143

[Close]

BLAST of CmaCh15G001480 vs. NCBI nr
Match: gi|700190608|gb|KGN45812.1| (Poly(A)-binding protein C-terminal interacting protein 6 [Cucumis sativus])

HSP 1 Score: 256.9 bits (655), Expect = 2.0e-65
Identity = 122/140 (87.14%), Postives = 131/140 (93.57%), Query Frame = 1


Query: 1   MDVVALTNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWDLIQSSPWFREYWLQERFQDP 60
           MDVV   NSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWW+LIQSSPWFREYWLQERFQDP
Sbjct: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDP 60

Query: 61  QNDLSFAENDEIVLPDLENFLEDFACQQEEEELEFSKDLVPMGAFKWHKARTGAEVPRYA 120
           QN+LSF EN+E +LPDLE+F +DF  QQEEEELEFSKDLVPMGAFKW KAR+GAEVP+YA
Sbjct: 61  QNELSFGENEEFILPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA 120

Query: 121 QKAPKIVNVKVTPRTIHQPR 141
           QKAPKIVNVKV+PRTIHQPR
Sbjct: 121 QKAPKIVNVKVSPRTIHQPR 140

[Close]

BLAST of CmaCh15G001480 vs. NCBI nr
Match: gi|821595273|ref|NP_001295813.1| (protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucumis sativus])

HSP 1 Score: 240.0 bits (611), Expect = 2.6e-60
Identity = 114/132 (86.36%), Postives = 123/132 (93.18%), Query Frame = 1


Query: 1   MDVVALTNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWDLIQSSPWFREYWLQERFQDP 60
           MDVV   NSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWW+LIQSSPWFREYWLQERFQDP
Sbjct: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDP 60

Query: 61  QNDLSFAENDEIVLPDLENFLEDFACQQEEEELEFSKDLVPMGAFKWHKARTGAEVPRYA 120
           QN+LSF EN+E +LPDLE+F +DF  QQEEEELEFSKDLVPMGAFKW KAR+GAEVP+YA
Sbjct: 61  QNELSFGENEEFILPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA 120

Query: 121 QKAPKIVNVKVT 133
           QKAPKIVNVKV+
Sbjct: 121 QKAPKIVNVKVS 132

[Close]

BLAST of CmaCh15G001480 vs. NCBI nr
Match: gi|1009121463|ref|XP_015877468.1| (PREDICTED: protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Ziziphus jujuba])

HSP 1 Score: 172.9 bits (437), Expect = 3.8e-40
Identity = 86/140 (61.43%), Postives = 104/140 (74.29%), Query Frame = 1


Query: 1   MDVVALTNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWDLIQSSPWFREYWLQERFQDP 60
           MDV++   SSS+   LNPNAP+FVP+AYRTVEDFSD+WW L+QSSPWFR+YWLQE F DP
Sbjct: 98  MDVISARMSSST---LNPNAPMFVPLAYRTVEDFSDEWWALVQSSPWFRDYWLQECFHDP 157

Query: 61  QNDLSFAENDEIVLPDLENFLEDFACQQEEEELEFSKDLVPMGAFKWHKARTGAEVPRYA 120
           Q+D SF +  + VLP+++    D     EE   + SK+LV MGA KW K R   EVPRY 
Sbjct: 158 QDDPSFVDIYDPVLPEIDALFHDADIINEEGGGDHSKELVSMGALKWRKGRALTEVPRYI 217

Query: 121 QKAPKIVNVKVTPRTIHQPR 141
           +KAPKIVNVKV+PRTI QPR
Sbjct: 218 EKAPKIVNVKVSPRTIQQPR 234

[Close]

BLAST of CmaCh15G001480 vs. NCBI nr
Match: gi|567886632|ref|XP_006435838.1| (hypothetical protein CICLE_v10033013mg [Citrus clementina])

HSP 1 Score: 171.4 bits (433), Expect = 1.1e-39
Identity = 83/140 (59.29%), Postives = 106/140 (75.71%), Query Frame = 1


Query: 1   MDVVALTNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWDLIQSSPWFREYWLQERFQDP 60
           M+V++  +SSSS S LNPNAP+F+P AYR VEDFSD+WW LIQSSPWFR+YWLQE + DP
Sbjct: 5   MEVLSQRSSSSSTSTLNPNAPMFIPFAYRMVEDFSDEWWALIQSSPWFRDYWLQECYFDP 64

Query: 61  QNDLSFAENDEIVLPDLENFLEDFACQQEEEELEFSKDLVPMGAFKWHKARTGAEVPRYA 120
           Q+D  F++ D++VLPD++    D   Q+E EE +F KDLV +G  KW K     E  RY+
Sbjct: 65  QSDPLFSDFDDLVLPDVDEIFPD-KHQEEMEERDFCKDLVSLGTLKWKKGGAMIEKQRYS 124

Query: 121 QKAPKIVNVKVTPRTIHQPR 141
           +KAPKIV+VKV+PRTI QPR
Sbjct: 125 EKAPKIVSVKVSPRTIQQPR 143

[Close]

BLAST of CmaCh15G001480 vs. NCBI nr
Match: gi|694386924|ref|XP_009369231.1| (PREDICTED: protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Pyrus x bretschneideri])

HSP 1 Score: 171.4 bits (433), Expect = 1.1e-39
Identity = 87/149 (58.39%), Postives = 109/149 (73.15%), Query Frame = 1


Query: 1   MDVVALTNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWDLIQSSPWFREYWLQERFQDP 60
           MDV++ T + SS   LNPNAP+FVP+AYRTVEDFS +WW L+QSSPWF++YWLQERFQDP
Sbjct: 1   MDVISRTTTMSS--NLNPNAPMFVPLAYRTVEDFSAEWWALVQSSPWFQDYWLQERFQDP 60

Query: 61  QNDLSFAE-NDEIVLPDLENFLEDF--------ACQQEEEELEFSKDLVPMGAFKWHKAR 120
           QND SF++ +D  +L D++   +D         A   EEEE +F+K+LV +G  KW K R
Sbjct: 61  QNDPSFSDIHDPALLSDVDALFDDVENIHHSPNAQPAEEEEKDFNKELVSLGLLKWRKGR 120

Query: 121 TGAEVPRYAQKAPKIVNVKVTPRTIHQPR 141
             AE PRY +KAPKIVNVKV+PR I QPR
Sbjct: 121 PVAEAPRYIEKAPKIVNVKVSPRAIQQPR 147

The following BLAST results are available for this feature:

BLAST of CmaCh15G001480 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ERD15_ARATH	1.5e-12	32.90	Protein EARLY RESPONSIVE TO DEHYDRATION 15 OS=Arabidopsis thaliana GN=ERD15 PE=1...	[more]
CID2_ARATH	5.4e-10	31.39	Polyadenylate-binding protein-interacting protein 2 OS=Arabidopsis thaliana GN=C...	[more]

BLAST of CmaCh15G001480 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KBP8_CUCSA	1.4e-65	87.14	Poly(A)-binding protein C-terminal interacting protein 6 OS=Cucumis sativus GN=C...	[more]
Q6ELF9_CUCSA	1.8e-60	86.36	Poly(A)-binding protein C-terminal interacting protein 6 OS=Cucumis sativus PE=2...	[more]
V4SMQ7_9ROSI	7.8e-40	59.29	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033013mg PE=4 SV=1	[more]
A0A067E1T5_CITSI	1.0e-39	59.29	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032323mg PE=4 SV=1	[more]
W9QXE6_9ROSA	1.7e-39	59.44	Uncharacterized protein OS=Morus notabilis GN=L484_012280 PE=4 SV=1	[more]

BLAST of CmaCh15G001480 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G41430.1	8.6e-14	32.90	dehydration-induced protein (ERD15)	[more]
AT4G14270.1	3.0e-11	31.39	Protein containing PAM2 motif which mediates interaction with the PA...	[more]

BLAST of CmaCh15G001480 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700190608\|gb\|KGN45812.1\|	2.0e-65	87.14	Poly(A)-binding protein C-terminal interacting protein 6 [Cucumis sativus]	[more]
gi\|821595273\|ref\|NP_001295813.1\|	2.6e-60	86.36	protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucumis sativus]	[more]
gi\|1009121463\|ref\|XP_015877468.1\|	3.8e-40	61.43	PREDICTED: protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Ziziphus jujuba]	[more]
gi\|567886632\|ref\|XP_006435838.1\|	1.1e-39	59.29	hypothetical protein CICLE_v10033013mg [Citrus clementina]	[more]
gi\|694386924\|ref\|XP_009369231.1\|	1.1e-39	58.39	PREDICTED: protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Pyrus x bretschneide...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh15G001480.1	CmaCh15G001480.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33790	FAMILY NOT NAMED	coord: 7..140 score: 2.4
None	No IPR available	PANTHER	PTHR33790:SF3	SUBFAMILY NOT NAMED	coord: 7..140 score: 2.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh15G001480	Cucsa.136830	Cucumber (Gy14) v1	cgycmaB0369
CmaCh15G001480	Cla006610	Watermelon (97103) v1	cmawmB283
CmaCh15G001480	Csa6G013350	Cucumber (Chinese Long) v2	cmacuB309
CmaCh15G001480	MELO3C019981	Melon (DHL92) v3.5.1	cmameB272
CmaCh15G001480	ClCG11G005940	Watermelon (Charleston Gray)	cmawcgB252
CmaCh15G001480	CSPI06G01910	Wild cucumber (PI 183967)	cmacpiB314
CmaCh15G001480	CmoCh04G030100	Cucurbita moschata (Rifu)	cmacmoB308
CmaCh15G001480	Lsi03G002860	Bottle gourd (USVL1VR-Ls)	cmalsiB276
CmaCh15G001480	Cp4.1LG01g21820	Cucurbita pepo (Zucchini)	cmacpeB317
CmaCh15G001480	Cp4.1LG13g07330	Cucurbita pepo (Zucchini)	cmacpeB305
CmaCh15G001480	MELO3C019981.2	Melon (DHL92) v3.6.1	cmamedB312
CmaCh15G001480	CsaV3_6G002060	Cucumber (Chinese Long) v3	cmacucB0363
CmaCh15G001480	Cla97C11G212840	Watermelon (97103) v2	cmawmbB296
CmaCh15G001480	Bhi04G001863	Wax gourd	cmawgoB0397
CmaCh15G001480	Carg05958	Silver-seed gourd	carcmaB0030
CmaCh15G001480	Carg02140	Silver-seed gourd	carcmaB0362

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh15G001480	CmaCh04G028850	Cucurbita maxima (Rimu)	cmacmaB324

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh15G001480	Cucurbita pepo (Zucchini)	cmacpeB302
CmaCh15G001480	Cucurbita pepo (Zucchini)	cmacpeB320
CmaCh15G001480	Bottle gourd (USVL1VR-Ls)	cmalsiB270
CmaCh15G001480	Bottle gourd (USVL1VR-Ls)	cmalsiB285
CmaCh15G001480	Cucumber (Gy14) v2	cgybcmaB490
CmaCh15G001480	Cucumber (Gy14) v2	cgybcmaB741
CmaCh15G001480	Melon (DHL92) v3.6.1	cmamedB324
CmaCh15G001480	Silver-seed gourd	carcmaB0774
CmaCh15G001480	Silver-seed gourd	carcmaB0943
CmaCh15G001480	Cucumber (Chinese Long) v3	cmacucB0339
CmaCh15G001480	Cucumber (Chinese Long) v3	cmacucB0350
CmaCh15G001480	Watermelon (97103) v2	cmawmbB303
CmaCh15G001480	Watermelon (97103) v2	cmawmbB315
CmaCh15G001480	Wax gourd	cmawgoB0402
CmaCh15G001480	Cucurbita maxima (Rimu)	cmacmaB326
CmaCh15G001480	Cucumber (Gy14) v1	cgycmaB0353
CmaCh15G001480	Cucurbita moschata (Rifu)	cmacmoB287
CmaCh15G001480	Cucurbita moschata (Rifu)	cmacmoB300
CmaCh15G001480	Cucurbita moschata (Rifu)	cmacmoB315