ClCG11G005940 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG11G005940
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Early response to dehydration 15-like protein
Location	CG_Chr11 : 6425394 .. 6426279 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCCATCTTCCTTTAAACAGTGTCATTTCCGTAATAAAACTAAAACCTGAGTGCTATTTCACTTTTTCATTTTTATATATTTCATCCCAACCTCTCCATAAATCTTCGTCTTCCAACTTCAAACTTCGATTAAGCAAGCTTCGGCTATGGATGTTGTTACTCAAAGAAACTCTTCTTCTTCCGTTTCCATGTTGAATCCTAACGCTCCCTTGTTCGTTCCGATGGCGTACAGGACGGTGGAGGATTTCTCCGACCAGTGGTGGGATCTTATCCAGTCGTCGCCGTGGTTTCGTGAGTACTGGCTTCAAGAACGCTTTCAAGATCCTCAAAATGATCTTTCGTTCGCAGAAAATGAAGAATTTGTCCTTCCGGATCTTGAGAATTTCTTCGACGACTTCACTCGTCAACGTAAGAAACGAAATCCAGTCATCCATTCAGTAATTCGTTTTACCTCTCTTAATCCAACTTACTAATTTGTTGTTCCTTTTGTTTTCTTCTTCAGAGGAAGAGGAAGAATTGGACTTCTCGAAGGATTTGGTTCCAATGGGAGCTTTCAAATGGCAGAAGGCTCGGTCTGGAGCGGAGGTTCCTAAGTATGCTCAAAAGGCTCCCAAGATCGTGAACGTGAAAGTGAGTCCGAGGACGATTCACCAGCCGAGATGAACTCGACGCGGTATTTCCAACTCATCGAGTATGTTTCTTCATCAGAACTCAGGAACCAGTTTGAATTGTTGTTGATCTAGGTTTTCCATTTCGTTTATGTACAGAGTCTAGAACTTGATCTGTTACAAATTAACTCCGATGGTCTGTGTTTAGTTCATGTAAATTTGTACCAAGTCTTACTTTCGATTATGATAGAATAAAGAGTTCCAAAATTCTCAACAAA

mRNA sequence

TTCCATCTTCCTTTAAACAGTGTCATTTCCGTAATAAAACTAAAACCTGAGTGCTATTTCACTTTTTCATTTTTATATATTTCATCCCAACCTCTCCATAAATCTTCGTCTTCCAACTTCAAACTTCGATTAAGCAAGCTTCGGCTATGGATGTTGTTACTCAAAGAAACTCTTCTTCTTCCGTTTCCATGTTGAATCCTAACGCTCCCTTGTTCGTTCCGATGGCGTACAGGACGGTGGAGGATTTCTCCGACCAGTGGTGGGATCTTATCCAGTCGTCGCCGTGGTTTCGTGAGTACTGGCTTCAAGAACGCTTTCAAGATCCTCAAAATGATCTTTCGTTCGCAGAAAATGAAGAATTTGTCCTTCCGGATCTTGAGAATTTCTTCGACGACTTCACTCGTCAACAGGAAGAGGAAGAATTGGACTTCTCGAAGGATTTGGTTCCAATGGGAGCTTTCAAATGGCAGAAGGCTCGGTCTGGAGCGGAGGTTCCTAAGTATGCTCAAAAGGCTCCCAAGATCGTGAACGTGAAAGTGAGTCCGAGGACGATTCACCAGCCGAGATGAACTCGACGCGGTATTTCCAACTCATCGAGTATGTTTCTTCATCAGAACTCAGGAACCAGTTTGAATTGTTGTTGATCTAGGTTTTCCATTTCGTTTATGTACAGAGTCTAGAACTTGATCTGTTACAAATTAACTCCGATGGTCTGTGTTTAGTTCATGTAAATTTGTACCAAGTCTTACTTTCGATTATGATAGAATAAAGAGTTCCAAAATTCTCAACAAA

Coding sequence (CDS)

ATGGATGTTGTTACTCAAAGAAACTCTTCTTCTTCCGTTTCCATGTTGAATCCTAACGCTCCCTTGTTCGTTCCGATGGCGTACAGGACGGTGGAGGATTTCTCCGACCAGTGGTGGGATCTTATCCAGTCGTCGCCGTGGTTTCGTGAGTACTGGCTTCAAGAACGCTTTCAAGATCCTCAAAATGATCTTTCGTTCGCAGAAAATGAAGAATTTGTCCTTCCGGATCTTGAGAATTTCTTCGACGACTTCACTCGTCAACAGGAAGAGGAAGAATTGGACTTCTCGAAGGATTTGGTTCCAATGGGAGCTTTCAAATGGCAGAAGGCTCGGTCTGGAGCGGAGGTTCCTAAGTATGCTCAAAAGGCTCCCAAGATCGTGAACGTGAAAGTGAGTCCGAGGACGATTCACCAGCCGAGATGA

Protein sequence

MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWDLIQSSPWFREYWLQERFQDPQNDLSFAENEEFVLPDLENFFDDFTRQQEEEELDFSKDLVPMGAFKWQKARSGAEVPKYAQKAPKIVNVKVSPRTIHQPR

Homology

[Close]

BLAST of ClCG11G005940 vs. Swiss-Prot
Match: ERD15_ARATH (Protein EARLY RESPONSIVE TO DEHYDRATION 15 OS=Arabidopsis thaliana GN=ERD15 PE=1 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 6.6e-16
Identity = 55/156 (35.26%), Postives = 73/156 (46.79%), Query Frame = 1


Query: 14  SMLNPNAPLFVPMAYRTVEDFSDQWWDLIQSSPWFREYWLQERFQDPQNDLSFAEN---- 73
           S LNP+APLF+P A R VEDFS +WW L+ +S W+ +YW+ ++ Q         EN    
Sbjct: 9   STLNPDAPLFIPAAVRQVEDFSPEWWQLVTTSTWYPDYWISQQQQGADGFYDNGENENGG 68

Query: 74  ----------EEFVLPDLENFFDDFTRQ-----------QEEEELDFSK--DLVPMGAFK 133
                     E F   D+E+FFD    +           Q   E  F K  ++V   +  
Sbjct: 69  GHIDVADLLPESFDFDDMEDFFDTDAAEFDQGFDGRMYYQAPSEFGFGKNGEMVKKSSGN 128

Query: 134 WQKARSGAEVPKYAQKAPKIVNVKV--SPRTIHQPR 141
            +  RS  E  KYA+K  K  N +V  +PR IHQPR
Sbjct: 129 -RSPRSIVEPAKYAEKPAKWGNQRVAAAPRNIHQPR 163

[Close]

BLAST of ClCG11G005940 vs. Swiss-Prot
Match: CID2_ARATH (Polyadenylate-binding protein-interacting protein 2 OS=Arabidopsis thaliana GN=CID2 PE=2 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.3e-11
Identity = 46/137 (33.58%), Postives = 66/137 (48.18%), Query Frame = 1


Query: 13  VSMLNPNAPLFVPMAYRTVEDFSDQWWDLIQSSPWFREYWLQERFQDP---QNDLSFAE- 72
           +S LNPNAP+F P+ +R VEDFS +WWDL+ +S WFR++WL    ++     +D S  E 
Sbjct: 9   LSTLNPNAPVFDPVEFREVEDFSPKWWDLVTTSKWFRDFWLSANSENEFLGGDDFSVMEE 68

Query: 73  --NEEFVLPDLENFFDDFTRQQEEEELDFSKDLVPMGAFKWQKARSGAEVPKYAQKAPKI 132
              E     D  +  D  T       L    ++      K  +++  +  PKY QK  K 
Sbjct: 69  EFEEMIASSDGGSMADTVTEADVASYLKMLLNIAESTKEKIYRSKVSSCSPKYNQK--KY 128

Query: 133 VNVKVSPRT---IHQPR 141
           +N   + R    I+QPR
Sbjct: 129 MNPNFNCRRNHHIYQPR 143

[Close]

BLAST of ClCG11G005940 vs. TrEMBL
Match: A0A0A0KBP8_CUCSA (Poly(A)-binding protein C-terminal interacting protein 6 OS=Cucumis sativus GN=Csa_6G013350 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 6.3e-74
Identity = 134/140 (95.71%), Postives = 139/140 (99.29%), Query Frame = 1


Query: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWDLIQSSPWFREYWLQERFQDP 60
           MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWW+LIQSSPWFREYWLQERFQDP
Sbjct: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDP 60

Query: 61  QNDLSFAENEEFVLPDLENFFDDFTRQQEEEELDFSKDLVPMGAFKWQKARSGAEVPKYA 120
           QN+LSF ENEEF+LPDLE+FFDDFTRQQEEEEL+FSKDLVPMGAFKWQKARSGAEVPKYA
Sbjct: 61  QNELSFGENEEFILPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA 120

Query: 121 QKAPKIVNVKVSPRTIHQPR 141
           QKAPKIVNVKVSPRTIHQPR
Sbjct: 121 QKAPKIVNVKVSPRTIHQPR 140

[Close]

BLAST of ClCG11G005940 vs. TrEMBL
Match: Q6ELF9_CUCSA (Poly(A)-binding protein C-terminal interacting protein 6 OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 1.4e-68
Identity = 126/132 (95.45%), Postives = 131/132 (99.24%), Query Frame = 1


Query: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWDLIQSSPWFREYWLQERFQDP 60
           MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWW+LIQSSPWFREYWLQERFQDP
Sbjct: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDP 60

Query: 61  QNDLSFAENEEFVLPDLENFFDDFTRQQEEEELDFSKDLVPMGAFKWQKARSGAEVPKYA 120
           QN+LSF ENEEF+LPDLE+FFDDFTRQQEEEEL+FSKDLVPMGAFKWQKARSGAEVPKYA
Sbjct: 61  QNELSFGENEEFILPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA 120

Query: 121 QKAPKIVNVKVS 133
           QKAPKIVNVKVS
Sbjct: 121 QKAPKIVNVKVS 132

[Close]

BLAST of ClCG11G005940 vs. TrEMBL
Match: V4SMQ7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033013mg PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 8.9e-44
Identity = 86/140 (61.43%), Postives = 110/140 (78.57%), Query Frame = 1


Query: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWDLIQSSPWFREYWLQERFQDP 60
           M+V++QR+SSSS S LNPNAP+F+P AYR VEDFSD+WW LIQSSPWFR+YWLQE + DP
Sbjct: 5   MEVLSQRSSSSSTSTLNPNAPMFIPFAYRMVEDFSDEWWALIQSSPWFRDYWLQECYFDP 64

Query: 61  QNDLSFAENEEFVLPDLENFFDDFTRQQEEEELDFSKDLVPMGAFKWQKARSGAEVPKYA 120
           Q+D  F++ ++ VLPD++  F D   Q+E EE DF KDLV +G  KW+K  +  E  +Y+
Sbjct: 65  QSDPLFSDFDDLVLPDVDEIFPD-KHQEEMEERDFCKDLVSLGTLKWKKGGAMIEKQRYS 124

Query: 121 QKAPKIVNVKVSPRTIHQPR 141
           +KAPKIV+VKVSPRTI QPR
Sbjct: 125 EKAPKIVSVKVSPRTIQQPR 143

[Close]

BLAST of ClCG11G005940 vs. TrEMBL
Match: A0A067E1T5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032323mg PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.2e-43
Identity = 86/140 (61.43%), Postives = 110/140 (78.57%), Query Frame = 1


Query: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWDLIQSSPWFREYWLQERFQDP 60
           M+V++QR+SSSS S LNPNAP+F+P AYR VEDFSD+WW LIQSSPWFR+YWLQE + DP
Sbjct: 5   MEVLSQRSSSSSTSTLNPNAPMFIPFAYRMVEDFSDEWWALIQSSPWFRDYWLQECYFDP 64

Query: 61  QNDLSFAENEEFVLPDLENFFDDFTRQQEEEELDFSKDLVPMGAFKWQKARSGAEVPKYA 120
           Q+D  F++ ++ VLPD++  F D   Q+E EE DF KDLV +G  KW+K  +  E  +Y+
Sbjct: 65  QSDPLFSDFDDLVLPDVDEIFPD-KHQEEIEERDFCKDLVSLGTLKWKKGGAMIEKQRYS 124

Query: 121 QKAPKIVNVKVSPRTIHQPR 141
           +KAPKIV+VKVSPRTI QPR
Sbjct: 125 EKAPKIVSVKVSPRTIQQPR 143

[Close]

BLAST of ClCG11G005940 vs. TrEMBL
Match: W9QXE6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_012280 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.2e-43
Identity = 89/143 (62.24%), Postives = 111/143 (77.62%), Query Frame = 1


Query: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWDLIQSSPWFREYWLQERFQDP 60
           MDV++ R+SSSS S LNPNAP+FVP+AYRTVEDFSD+WW L+QSSPWFR+YWLQER+ DP
Sbjct: 3   MDVISGRSSSSS-STLNPNAPMFVPLAYRTVEDFSDEWWALVQSSPWFRDYWLQERYCDP 62

Query: 61  QNDLSFAENEEFVLPDLENFFDD---FTRQQEEEELDFSKDLVPMGAFKWQKARSGAEVP 120
           Q D SF +  +  L D+++FFDD     + +EE E D+SK LV +GA KW+K R+ AE P
Sbjct: 63  QTDPSFFDIYDLALLDVDSFFDDDVSSMKTEEEGERDYSKKLVRLGALKWRKGRALAEAP 122

Query: 121 KYAQKAPKIVNVKVSPRTIHQPR 141
           +Y +K PKIV VK SPRTI QPR
Sbjct: 123 RYIEKVPKIVKVKPSPRTIQQPR 144

[Close]

BLAST of ClCG11G005940 vs. TAIR10
Match: AT2G41430.1 (AT2G41430.1 dehydration-induced protein (ERD15))

HSP 1 Score: 85.1 bits (209), Expect = 3.7e-17
Identity = 55/156 (35.26%), Postives = 73/156 (46.79%), Query Frame = 1


Query: 14  SMLNPNAPLFVPMAYRTVEDFSDQWWDLIQSSPWFREYWLQERFQDPQNDLSFAEN---- 73
           S LNP+APLF+P A R VEDFS +WW L+ +S W+ +YW+ ++ Q         EN    
Sbjct: 9   STLNPDAPLFIPAAVRQVEDFSPEWWQLVTTSTWYPDYWISQQQQGADGFYDNGENENGG 68

Query: 74  ----------EEFVLPDLENFFDDFTRQ-----------QEEEELDFSK--DLVPMGAFK 133
                     E F   D+E+FFD    +           Q   E  F K  ++V   +  
Sbjct: 69  GHIDVADLLPESFDFDDMEDFFDTDAAEFDQGFDGRMYYQAPSEFGFGKNGEMVKKSSGN 128

Query: 134 WQKARSGAEVPKYAQKAPKIVNVKV--SPRTIHQPR 141
            +  RS  E  KYA+K  K  N +V  +PR IHQPR
Sbjct: 129 -RSPRSIVEPAKYAEKPAKWGNQRVAAAPRNIHQPR 163

[Close]

BLAST of ClCG11G005940 vs. TAIR10
Match: AT4G14270.1 (AT4G14270.1 Protein containing PAM2 motif which mediates interaction with the PABC domain of polyadenyl binding proteins.)

HSP 1 Score: 70.9 bits (172), Expect = 7.2e-13
Identity = 46/137 (33.58%), Postives = 66/137 (48.18%), Query Frame = 1


Query: 13  VSMLNPNAPLFVPMAYRTVEDFSDQWWDLIQSSPWFREYWLQERFQDP---QNDLSFAE- 72
           +S LNPNAP+F P+ +R VEDFS +WWDL+ +S WFR++WL    ++     +D S  E 
Sbjct: 9   LSTLNPNAPVFDPVEFREVEDFSPKWWDLVTTSKWFRDFWLSANSENEFLGGDDFSVMEE 68

Query: 73  --NEEFVLPDLENFFDDFTRQQEEEELDFSKDLVPMGAFKWQKARSGAEVPKYAQKAPKI 132
              E     D  +  D  T       L    ++      K  +++  +  PKY QK  K 
Sbjct: 69  EFEEMIASSDGGSMADTVTEADVASYLKMLLNIAESTKEKIYRSKVSSCSPKYNQK--KY 128

Query: 133 VNVKVSPRT---IHQPR 141
           +N   + R    I+QPR
Sbjct: 129 MNPNFNCRRNHHIYQPR 143

[Close]

BLAST of ClCG11G005940 vs. NCBI nr
Match: gi|700190608|gb|KGN45812.1| (Poly(A)-binding protein C-terminal interacting protein 6 [Cucumis sativus])

HSP 1 Score: 284.6 bits (727), Expect = 9.0e-74
Identity = 134/140 (95.71%), Postives = 139/140 (99.29%), Query Frame = 1


Query: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWDLIQSSPWFREYWLQERFQDP 60
           MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWW+LIQSSPWFREYWLQERFQDP
Sbjct: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDP 60

Query: 61  QNDLSFAENEEFVLPDLENFFDDFTRQQEEEELDFSKDLVPMGAFKWQKARSGAEVPKYA 120
           QN+LSF ENEEF+LPDLE+FFDDFTRQQEEEEL+FSKDLVPMGAFKWQKARSGAEVPKYA
Sbjct: 61  QNELSFGENEEFILPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA 120

Query: 121 QKAPKIVNVKVSPRTIHQPR 141
           QKAPKIVNVKVSPRTIHQPR
Sbjct: 121 QKAPKIVNVKVSPRTIHQPR 140

[Close]

BLAST of ClCG11G005940 vs. NCBI nr
Match: gi|821595273|ref|NP_001295813.1| (protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucumis sativus])

HSP 1 Score: 266.9 bits (681), Expect = 2.0e-68
Identity = 126/132 (95.45%), Postives = 131/132 (99.24%), Query Frame = 1


Query: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWDLIQSSPWFREYWLQERFQDP 60
           MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWW+LIQSSPWFREYWLQERFQDP
Sbjct: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDP 60

Query: 61  QNDLSFAENEEFVLPDLENFFDDFTRQQEEEELDFSKDLVPMGAFKWQKARSGAEVPKYA 120
           QN+LSF ENEEF+LPDLE+FFDDFTRQQEEEEL+FSKDLVPMGAFKWQKARSGAEVPKYA
Sbjct: 61  QNELSFGENEEFILPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA 120

Query: 121 QKAPKIVNVKVS 133
           QKAPKIVNVKVS
Sbjct: 121 QKAPKIVNVKVS 132

[Close]

BLAST of ClCG11G005940 vs. NCBI nr
Match: gi|567886632|ref|XP_006435838.1| (hypothetical protein CICLE_v10033013mg [Citrus clementina])

HSP 1 Score: 184.5 bits (467), Expect = 1.3e-43
Identity = 86/140 (61.43%), Postives = 110/140 (78.57%), Query Frame = 1


Query: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWDLIQSSPWFREYWLQERFQDP 60
           M+V++QR+SSSS S LNPNAP+F+P AYR VEDFSD+WW LIQSSPWFR+YWLQE + DP
Sbjct: 5   MEVLSQRSSSSSTSTLNPNAPMFIPFAYRMVEDFSDEWWALIQSSPWFRDYWLQECYFDP 64

Query: 61  QNDLSFAENEEFVLPDLENFFDDFTRQQEEEELDFSKDLVPMGAFKWQKARSGAEVPKYA 120
           Q+D  F++ ++ VLPD++  F D   Q+E EE DF KDLV +G  KW+K  +  E  +Y+
Sbjct: 65  QSDPLFSDFDDLVLPDVDEIFPD-KHQEEMEERDFCKDLVSLGTLKWKKGGAMIEKQRYS 124

Query: 121 QKAPKIVNVKVSPRTIHQPR 141
           +KAPKIV+VKVSPRTI QPR
Sbjct: 125 EKAPKIVSVKVSPRTIQQPR 143

[Close]

BLAST of ClCG11G005940 vs. NCBI nr
Match: gi|641825580|gb|KDO44846.1| (hypothetical protein CISIN_1g032323mg [Citrus sinensis])

HSP 1 Score: 184.1 bits (466), Expect = 1.7e-43
Identity = 86/140 (61.43%), Postives = 110/140 (78.57%), Query Frame = 1


Query: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWDLIQSSPWFREYWLQERFQDP 60
           M+V++QR+SSSS S LNPNAP+F+P AYR VEDFSD+WW LIQSSPWFR+YWLQE + DP
Sbjct: 5   MEVLSQRSSSSSTSTLNPNAPMFIPFAYRMVEDFSDEWWALIQSSPWFRDYWLQECYFDP 64

Query: 61  QNDLSFAENEEFVLPDLENFFDDFTRQQEEEELDFSKDLVPMGAFKWQKARSGAEVPKYA 120
           Q+D  F++ ++ VLPD++  F D   Q+E EE DF KDLV +G  KW+K  +  E  +Y+
Sbjct: 65  QSDPLFSDFDDLVLPDVDEIFPD-KHQEEIEERDFCKDLVSLGTLKWKKGGAMIEKQRYS 124

Query: 121 QKAPKIVNVKVSPRTIHQPR 141
           +KAPKIV+VKVSPRTI QPR
Sbjct: 125 EKAPKIVSVKVSPRTIQQPR 143

[Close]

BLAST of ClCG11G005940 vs. NCBI nr
Match: gi|703063768|ref|XP_010087036.1| (hypothetical protein L484_012280 [Morus notabilis])

HSP 1 Score: 184.1 bits (466), Expect = 1.7e-43
Identity = 89/143 (62.24%), Postives = 111/143 (77.62%), Query Frame = 1


Query: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWDLIQSSPWFREYWLQERFQDP 60
           MDV++ R+SSSS S LNPNAP+FVP+AYRTVEDFSD+WW L+QSSPWFR+YWLQER+ DP
Sbjct: 3   MDVISGRSSSSS-STLNPNAPMFVPLAYRTVEDFSDEWWALVQSSPWFRDYWLQERYCDP 62

Query: 61  QNDLSFAENEEFVLPDLENFFDD---FTRQQEEEELDFSKDLVPMGAFKWQKARSGAEVP 120
           Q D SF +  +  L D+++FFDD     + +EE E D+SK LV +GA KW+K R+ AE P
Sbjct: 63  QTDPSFFDIYDLALLDVDSFFDDDVSSMKTEEEGERDYSKKLVRLGALKWRKGRALAEAP 122

Query: 121 KYAQKAPKIVNVKVSPRTIHQPR 141
           +Y +K PKIV VK SPRTI QPR
Sbjct: 123 RYIEKVPKIVKVKPSPRTIQQPR 144

The following BLAST results are available for this feature:

BLAST of ClCG11G005940 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ERD15_ARATH	6.6e-16	35.26	Protein EARLY RESPONSIVE TO DEHYDRATION 15 OS=Arabidopsis thaliana GN=ERD15 PE=1...	[more]
CID2_ARATH	1.3e-11	33.58	Polyadenylate-binding protein-interacting protein 2 OS=Arabidopsis thaliana GN=C...	[more]

BLAST of ClCG11G005940 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KBP8_CUCSA	6.3e-74	95.71	Poly(A)-binding protein C-terminal interacting protein 6 OS=Cucumis sativus GN=C...	[more]
Q6ELF9_CUCSA	1.4e-68	95.45	Poly(A)-binding protein C-terminal interacting protein 6 OS=Cucumis sativus PE=2...	[more]
V4SMQ7_9ROSI	8.9e-44	61.43	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033013mg PE=4 SV=1	[more]
A0A067E1T5_CITSI	1.2e-43	61.43	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032323mg PE=4 SV=1	[more]
W9QXE6_9ROSA	1.2e-43	62.24	Uncharacterized protein OS=Morus notabilis GN=L484_012280 PE=4 SV=1	[more]

BLAST of ClCG11G005940 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G41430.1	3.7e-17	35.26	dehydration-induced protein (ERD15)	[more]
AT4G14270.1	7.2e-13	33.58	Protein containing PAM2 motif which mediates interaction with the PA...	[more]

BLAST of ClCG11G005940 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700190608\|gb\|KGN45812.1\|	9.0e-74	95.71	Poly(A)-binding protein C-terminal interacting protein 6 [Cucumis sativus]	[more]
gi\|821595273\|ref\|NP_001295813.1\|	2.0e-68	95.45	protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucumis sativus]	[more]
gi\|567886632\|ref\|XP_006435838.1\|	1.3e-43	61.43	hypothetical protein CICLE_v10033013mg [Citrus clementina]	[more]
gi\|641825580\|gb\|KDO44846.1\|	1.7e-43	61.43	hypothetical protein CISIN_1g032323mg [Citrus sinensis]	[more]
gi\|703063768\|ref\|XP_010087036.1\|	1.7e-43	62.24	hypothetical protein L484_012280 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0009617	response to bacterium
biological_process	GO:0009644	response to high light intensity
biological_process	GO:0009414	response to water deprivation
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG11G005940.1	ClCG11G005940.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 140..140 scor
None	No IPR available	PANTHER	PTHR33790	FAMILY NOT NAMED	coord: 6..140 score: 8.3
None	No IPR available	PANTHER	PTHR33790:SF3	SUBFAMILY NOT NAMED	coord: 6..140 score: 8.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG11G005940	Csa6G013350	Cucumber (Chinese Long) v2	cuwcgB429
ClCG11G005940	MELO3C019981	Melon (DHL92) v3.5.1	mewcgB268
ClCG11G005940	Cla006610	Watermelon (97103) v1	wcgwmB108
ClCG11G005940	Cla97C11G212840	Watermelon (97103) v2	wcgwmbB065
ClCG11G005940	Bhi04G001863	Wax gourd	wcgwgoB158
ClCG11G005940	CSPI06G01910	Wild cucumber (PI 183967)	cpiwcgB450
ClCG11G005940	Cucsa.136830	Cucumber (Gy14) v1	cgywcgB224
ClCG11G005940	CmaCh15G001480	Cucurbita maxima (Rimu)	cmawcgB252
ClCG11G005940	CmaCh04G028850	Cucurbita maxima (Rimu)	cmawcgB619
ClCG11G005940	CmoCh04G030100	Cucurbita moschata (Rifu)	cmowcgB621
ClCG11G005940	CmoCh15G001620	Cucurbita moschata (Rifu)	cmowcgB240
ClCG11G005940	Lsi03G002860	Bottle gourd (USVL1VR-Ls)	lsiwcgB226
ClCG11G005940	Cp4.1LG13g07330	Cucurbita pepo (Zucchini)	cpewcgB159
ClCG11G005940	Cp4.1LG01g21820	Cucurbita pepo (Zucchini)	cpewcgB355
ClCG11G005940	MELO3C019981.2	Melon (DHL92) v3.6.1	medwcgB259
ClCG11G005940	Carg02140	Silver-seed gourd	carwcgB0255
ClCG11G005940	Carg05958	Silver-seed gourd	carwcgB0019
ClCG11G005940	CsaV3_6G002060	Cucumber (Chinese Long) v3	cucwcgB452

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG11G005940	Cucurbita pepo (Zucchini)	cpewcgB060
ClCG11G005940	Cucurbita pepo (Zucchini)	cpewcgB358
ClCG11G005940	Bottle gourd (USVL1VR-Ls)	lsiwcgB124
ClCG11G005940	Bottle gourd (USVL1VR-Ls)	lsiwcgB263
ClCG11G005940	Cucumber (Gy14) v2	cgybwcgB262
ClCG11G005940	Cucumber (Gy14) v2	cgybwcgB397
ClCG11G005940	Melon (DHL92) v3.6.1	medwcgB506
ClCG11G005940	Silver-seed gourd	carwcgB0541
ClCG11G005940	Silver-seed gourd	carwcgB0644
ClCG11G005940	Cucumber (Chinese Long) v3	cucwcgB293
ClCG11G005940	Cucumber (Chinese Long) v3	cucwcgB384
ClCG11G005940	Watermelon (97103) v2	wcgwmbB063
ClCG11G005940	Watermelon (97103) v2	wcgwmbB072
ClCG11G005940	Watermelon (97103) v2	wcgwmbB080
ClCG11G005940	Wax gourd	wcgwgoB138
ClCG11G005940	Wax gourd	wcgwgoB169
ClCG11G005940	Watermelon (Charleston Gray)	wcgwcgB040
ClCG11G005940	Watermelon (Charleston Gray)	wcgwcgB067
ClCG11G005940	Watermelon (Charleston Gray)	wcgwcgB076
ClCG11G005940	Cucumber (Gy14) v1	cgywcgB213
ClCG11G005940	Cucumber (Gy14) v1	cgywcgB243
ClCG11G005940	Cucurbita maxima (Rimu)	cmawcgB575
ClCG11G005940	Cucurbita maxima (Rimu)	cmawcgB624
ClCG11G005940	Cucurbita maxima (Rimu)	cmawcgB625
ClCG11G005940	Cucurbita moschata (Rifu)	cmowcgB572
ClCG11G005940	Cucurbita moschata (Rifu)	cmowcgB625
ClCG11G005940	Wild cucumber (PI 183967)	cpiwcgB294
ClCG11G005940	Cucumber (Chinese Long) v2	cuwcgB361
ClCG11G005940	Melon (DHL92) v3.5.1	mewcgB511
ClCG11G005940	Watermelon (97103) v1	wcgwmB094
ClCG11G005940	Watermelon (97103) v1	wcgwmB100