Carg05958 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg05958
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Protein early responsive to dehydration 15
Location	Cucurbita_argyrosperma_scaffold_026 : 434073 .. 434905 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCAAATTCATTTCTTCAGTTTTATATATCTCTTCCCCAGCTCTGGATAAAACTTCATCTGCAACTCCTTGATTCGTTTTCGCAAGCAGTAGCTATGGATGTGGTTGCTCGAAGAACCTCCTCGTCTTCCGTTTCGATGTTGAACCCTAATGCTCCGTTGTTCGTTCCCATGGCGTACAGGACGGTCGAGGATTTCTCTGACCAGTGGTGGAATTTGATCCAGTCCTCCCCGTGGTTTCGCGAGTACTGGCTTCAAGAACGCTTTCAAGATCCTCAAAACGATTTTTCATTTGCAGAGAATGAAGAAATTGTTCTTCCGGATCTCGAGAATATTTTCGAGGACTTCGCTCGTCAACGTAAGTGATGTAATCTAGTCACTGGTTGAGTCGATTTGTTCCCTCTCTTGACAAATCTAACGAACTCGTTGTTTCTTTTGTTTTCTTCTTCAGAGGAAGAGGAAGAATTTGAATTCTCCAAGGATTTGGTGCCAATGGGGGCTTTCAAATGGCATAAGGCTCAGACTGGAGCCGAGGTTCCCAGGTATGCTCAAAAGGCTCCCAAGATCGTGAACGTGAAAGTGAGTCCGAGAACGATTCACCAGCCGAGATAGATTCGTCGCGGAATTTCCAACTCATCGCAGTATGTTTCTTCAACAGAACTCAGGAACCAGTTTAAATTGTTGTGGATCTAGGTTTTCCATTTCGTCCATGTATAGAGTCTAGAACTTGATCGGTTAAGCATCAACTCTGATGATCTGTGTTTAGCTACTGTAAATTTGTACCAAGTCTTACTTTTCAATTATGATATAATAAAATAGTTCCAAAATTCTCAACC

mRNA sequence

GCAAATTCATTTCTTCAGTTTTATATATCTCTTCCCCAGCTCTGGATAAAACTTCATCTGCAACTCCTTGATTCGTTTTCGCAAGCAGTAGCTATGGATGTGGTTGCTCGAAGAACCTCCTCGTCTTCCGTTTCGATGTTGAACCCTAATGCTCCGTTGTTCGTTCCCATGGCGTACAGGACGGTCGAGGATTTCTCTGACCAGTGGTGGAATTTGATCCAGTCCTCCCCGTGGTTTCGCGAGTACTGGCTTCAAGAACGCTTTCAAGATCCTCAAAACGATTTTTCATTTGCAGAGAATGAAGAAATTGTTCTTCCGGATCTCGAGAATATTTTCGAGGACTTCGCTCGTCAACAGGAAGAGGAAGAATTTGAATTCTCCAAGGATTTGGTGCCAATGGGGGCTTTCAAATGGCATAAGGCTCAGACTGGAGCCGAGGTTCCCAGGTATGCTCAAAAGGCTCCCAAGATCGTGAACGTGAAAGTGAGTCCGAGAACGATTCACCAGCCGAGATAGATTCGTCGCGGAATTTCCAACTCATCGCAGTATGTTTCTTCAACAGAACTCAGGAACCAGTTTAAATTGTTGTGGATCTAGGTTTTCCATTTCGTCCATGTATAGAGTCTAGAACTTGATCGGTTAAGCATCAACTCTGATGATCTGTGTTTAGCTACTGTAAATTTGTACCAAGTCTTACTTTTCAATTATGATATAATAAAATAGTTCCAAAATTCTCAACC

Coding sequence (CDS)

GCAAATTCATTTCTTCAGTTTTATATATCTCTTCCCCAGCTCTGGATAAAACTTCATCTGCAACTCCTTGATTCGTTTTCGCAAGCAGTAGCTATGGATGTGGTTGCTCGAAGAACCTCCTCGTCTTCCGTTTCGATGTTGAACCCTAATGCTCCGTTGTTCGTTCCCATGGCGTACAGGACGGTCGAGGATTTCTCTGACCAGTGGTGGAATTTGATCCAGTCCTCCCCGTGGTTTCGCGAGTACTGGCTTCAAGAACGCTTTCAAGATCCTCAAAACGATTTTTCATTTGCAGAGAATGAAGAAATTGTTCTTCCGGATCTCGAGAATATTTTCGAGGACTTCGCTCGTCAACAGGAAGAGGAAGAATTTGAATTCTCCAAGGATTTGGTGCCAATGGGGGCTTTCAAATGGCATAAGGCTCAGACTGGAGCCGAGGTTCCCAGGTATGCTCAAAAGGCTCCCAAGATCGTGAACGTGAAAGTGAGTCCGAGAACGATTCACCAGCCGAGATAG

Protein sequence

ANSFLQFYISLPQLWIKLHLQLLDSFSQAVAMDVVARRTSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWNLIQSSPWFREYWLQERFQDPQNDFSFAENEEIVLPDLENIFEDFARQQEEEEFEFSKDLVPMGAFKWHKAQTGAEVPRYAQKAPKIVNVKVSPRTIHQPR

Homology

[Close]

BLAST of Carg05958 vs. NCBI nr
Match: XP_022990060.1 (protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita maxima])

HSP 1 Score: 284.3 bits (726), Expect = 2.8e-73
Identity = 138/140 (98.57%), Postives = 139/140 (99.29%), Query Frame = 0


Query: 32  MDVVARRTSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWNLIQSSPWFREYWLQERFQDP 91
           MDVVARRTSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWNLIQSSPWFREYWLQERFQDP
Sbjct: 1   MDVVARRTSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWNLIQSSPWFREYWLQERFQDP 60

Query: 92  QNDFSFAENEEIVLPDLENIFEDFARQQEEEEFEFSKDLVPMGAFKWHKAQTGAEVPRYA 151
           QNDFSFAENEEIVLPDLENIF+D ARQQEEEEFEFSKDLVPMGAFKWHKAQTGAEVPRYA
Sbjct: 61  QNDFSFAENEEIVLPDLENIFDDLARQQEEEEFEFSKDLVPMGAFKWHKAQTGAEVPRYA 120

Query: 152 QKAPKIVNVKVSPRTIHQPR 172
           QKAPKIVNVKVSPRTIHQPR
Sbjct: 121 QKAPKIVNVKVSPRTIHQPR 140

[Close]

BLAST of Carg05958 vs. NCBI nr
Match: XP_022992587.1 (protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita maxima])

HSP 1 Score: 263.5 bits (672), Expect = 5.1e-67
Identity = 128/140 (91.43%), Postives = 132/140 (94.29%), Query Frame = 0


Query: 32  MDVVARRTSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWNLIQSSPWFREYWLQERFQDP 91
           MDVVA   SSSSVSMLNPNAPLFVPMAYRTVEDFSDQWW+LIQSSPWFREYWLQERFQDP
Sbjct: 1   MDVVALTNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWDLIQSSPWFREYWLQERFQDP 60

Query: 92  QNDFSFAENEEIVLPDLENIFEDFARQQEEEEFEFSKDLVPMGAFKWHKAQTGAEVPRYA 151
           QND SFAEN+EIVLPDLEN  EDFA QQEEEE EFSKDLVPMGAFKWHKA+TGAEVPRYA
Sbjct: 61  QNDLSFAENDEIVLPDLENFLEDFACQQEEEELEFSKDLVPMGAFKWHKARTGAEVPRYA 120

Query: 152 QKAPKIVNVKVSPRTIHQPR 172
           QKAPKIVNVKV+PRTIHQPR
Sbjct: 121 QKAPKIVNVKVTPRTIHQPR 140

[Close]

BLAST of Carg05958 vs. NCBI nr
Match: XP_022939236.1 (protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita moschata])

HSP 1 Score: 261.5 bits (667), Expect = 1.9e-66
Identity = 127/140 (90.71%), Postives = 131/140 (93.57%), Query Frame = 0


Query: 32  MDVVARRTSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWNLIQSSPWFREYWLQERFQDP 91
           MDVVA   SSSSVSMLNPNAPLFVPMAYRTVEDFSDQWW+LIQSSPWFREYWLQERFQDP
Sbjct: 1   MDVVALTNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWDLIQSSPWFREYWLQERFQDP 60

Query: 92  QNDFSFAENEEIVLPDLENIFEDFARQQEEEEFEFSKDLVPMGAFKWHKAQTGAEVPRYA 151
           QND SF EN+EIVLPDLEN  EDFA QQEEEE EFSKDLVPMGAFKWHKA+TGAEVPRYA
Sbjct: 61  QNDLSFLENDEIVLPDLENFLEDFACQQEEEELEFSKDLVPMGAFKWHKARTGAEVPRYA 120

Query: 152 QKAPKIVNVKVSPRTIHQPR 172
           QKAPKIVNVKV+PRTIHQPR
Sbjct: 121 QKAPKIVNVKVTPRTIHQPR 140

[Close]

BLAST of Carg05958 vs. NCBI nr
Match: XP_023550947.1 (protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 260.0 bits (663), Expect = 5.7e-66
Identity = 126/140 (90.00%), Postives = 131/140 (93.57%), Query Frame = 0


Query: 32  MDVVARRTSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWNLIQSSPWFREYWLQERFQDP 91
           MDVVA   SSSSVSMLNPNAPLFVPMAYRTVEDFSDQWW+LIQSSPWFREYWLQERFQDP
Sbjct: 1   MDVVALTNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWDLIQSSPWFREYWLQERFQDP 60

Query: 92  QNDFSFAENEEIVLPDLENIFEDFARQQEEEEFEFSKDLVPMGAFKWHKAQTGAEVPRYA 151
           QND SF EN+EIVLPDLEN  EDFA QQEEEE EFSKDLVPMGAF+WHKA+TGAEVPRYA
Sbjct: 61  QNDLSFPENDEIVLPDLENFLEDFACQQEEEELEFSKDLVPMGAFQWHKARTGAEVPRYA 120

Query: 152 QKAPKIVNVKVSPRTIHQPR 172
           QKAPKIVNVKV+PRTIHQPR
Sbjct: 121 QKAPKIVNVKVTPRTIHQPR 140

[Close]

BLAST of Carg05958 vs. NCBI nr
Match: KGN45812.1 (Poly(A)-binding protein C-terminal interacting protein 6 [Cucumis sativus])

HSP 1 Score: 257.3 bits (656), Expect = 3.7e-65
Identity = 122/140 (87.14%), Postives = 130/140 (92.86%), Query Frame = 0


Query: 32  MDVVARRTSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWNLIQSSPWFREYWLQERFQDP 91
           MDVV +R SSSSVSMLNPNAPLFVPMAYRTVEDFSDQWW LIQSSPWFREYWLQERFQDP
Sbjct: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDP 60

Query: 92  QNDFSFAENEEIVLPDLENIFEDFARQQEEEEFEFSKDLVPMGAFKWHKAQTGAEVPRYA 151
           QN+ SF ENEE +LPDLE+ F+DF RQQEEEE EFSKDLVPMGAFKW KA++GAEVP+YA
Sbjct: 61  QNELSFGENEEFILPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA 120

Query: 152 QKAPKIVNVKVSPRTIHQPR 172
           QKAPKIVNVKVSPRTIHQPR
Sbjct: 121 QKAPKIVNVKVSPRTIHQPR 140

[Close]

BLAST of Carg05958 vs. TAIR10
Match: AT2G41430.1 (dehydration-induced protein (ERD15))

HSP 1 Score: 76.6 bits (187), Expect = 1.6e-14
Identity = 52/155 (33.55%), Postives = 79/155 (50.97%), Query Frame = 0


Query: 45  SMLNPNAPLFVPMAYRTVEDFSDQWWNLIQSSPWFREYWLQERFQDPQNDFSFAENEE-- 104
           S LNP+APLF+P A R VEDFS +WW L+ +S W+ +YW+ ++ Q     +   ENE   
Sbjct: 9   STLNPDAPLFIPAAVRQVEDFSPEWWQLVTTSTWYPDYWISQQQQGADGFYDNGENENGG 68

Query: 105 ------IVLP------DLENIFEDFARQ-----------QEEEEFEFSKDLVPMGAFKWH 164
                  +LP      D+E+ F+  A +           Q   EF F K+   +     +
Sbjct: 69  GHIDVADLLPESFDFDDMEDFFDTDAAEFDQGFDGRMYYQAPSEFGFGKNGEMVKKSSGN 128

Query: 165 KA-QTGAEVPRYAQKAPKIVNVKV--SPRTIHQPR 172
           ++ ++  E  +YA+K  K  N +V  +PR IHQPR
Sbjct: 129 RSPRSIVEPAKYAEKPAKWGNQRVAAAPRNIHQPR 163

[Close]

BLAST of Carg05958 vs. TAIR10
Match: AT4G14270.1 (Protein containing PAM2 motif which mediates interaction with the PABC domain of polyadenyl binding proteins.)

HSP 1 Score: 65.1 bits (157), Expect = 4.9e-11
Identity = 44/142 (30.99%), Postives = 72/142 (50.70%), Query Frame = 0


Query: 39  TSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWNLIQSSPWFREYWLQERFQDP---QNDF 98
           T    +S LNPNAP+F P+ +R VEDFS +WW+L+ +S WFR++WL    ++     +DF
Sbjct: 4   TIDRRLSTLNPNAPVFDPVEFREVEDFSPKWWDLVTTSKWFRDFWLSANSENEFLGGDDF 63

Query: 99  SFAE---NEEIVLPDLENIFEDFARQQEEEEFEFSKDLVPMGAFKWHKAQTGAEVPRYAQ 158
           S  E    E I   D  ++ +           +   ++      K ++++  +  P+Y Q
Sbjct: 64  SVMEEEFEEMIASSDGGSMADTVTEADVASYLKMLLNIAESTKEKIYRSKVSSCSPKYNQ 123

Query: 159 KAPKIVNVKVSPRT---IHQPR 172
           K  K +N   + R    I+QPR
Sbjct: 124 K--KYMNPNFNCRRNHHIYQPR 143

[Close]

BLAST of Carg05958 vs. Swiss-Prot
Match: sp|Q39096|ERD15_ARATH (Protein EARLY RESPONSIVE TO DEHYDRATION 15 OS=Arabidopsis thaliana OX=3702 GN=ERD15 PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 2.9e-13
Identity = 52/155 (33.55%), Postives = 79/155 (50.97%), Query Frame = 0


Query: 45  SMLNPNAPLFVPMAYRTVEDFSDQWWNLIQSSPWFREYWLQERFQDPQNDFSFAENEE-- 104
           S LNP+APLF+P A R VEDFS +WW L+ +S W+ +YW+ ++ Q     +   ENE   
Sbjct: 9   STLNPDAPLFIPAAVRQVEDFSPEWWQLVTTSTWYPDYWISQQQQGADGFYDNGENENGG 68

Query: 105 ------IVLP------DLENIFEDFARQ-----------QEEEEFEFSKDLVPMGAFKWH 164
                  +LP      D+E+ F+  A +           Q   EF F K+   +     +
Sbjct: 69  GHIDVADLLPESFDFDDMEDFFDTDAAEFDQGFDGRMYYQAPSEFGFGKNGEMVKKSSGN 128

Query: 165 KA-QTGAEVPRYAQKAPKIVNVKV--SPRTIHQPR 172
           ++ ++  E  +YA+K  K  N +V  +PR IHQPR
Sbjct: 129 RSPRSIVEPAKYAEKPAKWGNQRVAAAPRNIHQPR 163

[Close]

BLAST of Carg05958 vs. Swiss-Prot
Match: sp|Q94AR4|CID2_ARATH (Polyadenylate-binding protein-interacting protein 2 OS=Arabidopsis thaliana OX=3702 GN=CID2 PE=2 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 8.8e-10
Identity = 44/142 (30.99%), Postives = 72/142 (50.70%), Query Frame = 0


Query: 39  TSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWNLIQSSPWFREYWLQERFQDP---QNDF 98
           T    +S LNPNAP+F P+ +R VEDFS +WW+L+ +S WFR++WL    ++     +DF
Sbjct: 4   TIDRRLSTLNPNAPVFDPVEFREVEDFSPKWWDLVTTSKWFRDFWLSANSENEFLGGDDF 63

Query: 99  SFAE---NEEIVLPDLENIFEDFARQQEEEEFEFSKDLVPMGAFKWHKAQTGAEVPRYAQ 158
           S  E    E I   D  ++ +           +   ++      K ++++  +  P+Y Q
Sbjct: 64  SVMEEEFEEMIASSDGGSMADTVTEADVASYLKMLLNIAESTKEKIYRSKVSSCSPKYNQ 123

Query: 159 KAPKIVNVKVSPRT---IHQPR 172
           K  K +N   + R    I+QPR
Sbjct: 124 K--KYMNPNFNCRRNHHIYQPR 143

[Close]

BLAST of Carg05958 vs. TrEMBL
Match: tr|A0A0A0KBP8|A0A0A0KBP8_CUCSA (Poly(A)-binding protein C-terminal interacting protein 6 OS=Cucumis sativus OX=3659 GN=Csa_6G013350 PE=4 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 2.4e-65
Identity = 122/140 (87.14%), Postives = 130/140 (92.86%), Query Frame = 0


Query: 32  MDVVARRTSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWNLIQSSPWFREYWLQERFQDP 91
           MDVV +R SSSSVSMLNPNAPLFVPMAYRTVEDFSDQWW LIQSSPWFREYWLQERFQDP
Sbjct: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDP 60

Query: 92  QNDFSFAENEEIVLPDLENIFEDFARQQEEEEFEFSKDLVPMGAFKWHKAQTGAEVPRYA 151
           QN+ SF ENEE +LPDLE+ F+DF RQQEEEE EFSKDLVPMGAFKW KA++GAEVP+YA
Sbjct: 61  QNELSFGENEEFILPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA 120

Query: 152 QKAPKIVNVKVSPRTIHQPR 172
           QKAPKIVNVKVSPRTIHQPR
Sbjct: 121 QKAPKIVNVKVSPRTIHQPR 140

[Close]

BLAST of Carg05958 vs. TrEMBL
Match: tr|Q6ELF9|Q6ELF9_CUCSA (Poly(A)-binding protein C-terminal interacting protein 6 OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 3.1e-60
Identity = 114/132 (86.36%), Postives = 122/132 (92.42%), Query Frame = 0


Query: 32  MDVVARRTSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWNLIQSSPWFREYWLQERFQDP 91
           MDVV +R SSSSVSMLNPNAPLFVPMAYRTVEDFSDQWW LIQSSPWFREYWLQERFQDP
Sbjct: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDP 60

Query: 92  QNDFSFAENEEIVLPDLENIFEDFARQQEEEEFEFSKDLVPMGAFKWHKAQTGAEVPRYA 151
           QN+ SF ENEE +LPDLE+ F+DF RQQEEEE EFSKDLVPMGAFKW KA++GAEVP+YA
Sbjct: 61  QNELSFGENEEFILPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA 120

Query: 152 QKAPKIVNVKVS 164
           QKAPKIVNVKVS
Sbjct: 121 QKAPKIVNVKVS 132

[Close]

BLAST of Carg05958 vs. TrEMBL
Match: tr|A0A2P4HGR7|A0A2P4HGR7_QUESU (Protein early responsive to dehydration 15 OS=Quercus suber OX=58331 GN=CFP56_45815 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 2.5e-46
Identity = 102/154 (66.23%), Postives = 123/154 (79.87%), Query Frame = 0


Query: 22  LLDSFS--QAVAMDVVARRTSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWNLIQSSPWF 81
           LL SF+  + VAM+V+++RTSSS+   LNPNAPLFVP+AYRTVEDFSD+WW L+QSSPWF
Sbjct: 16  LLFSFADWREVAMEVISQRTSSST---LNPNAPLFVPLAYRTVEDFSDEWWELVQSSPWF 75

Query: 82  REYWLQERFQDPQNDFSFAENEEIVLP-DLENIFED-FARQQEEEEFEFSKDLVPMGAFK 141
           REYWLQERFQDPQND  F +  + VLP D++ +F+D +  Q EEEE  F KDLV +G  K
Sbjct: 76  REYWLQERFQDPQNDPFFPDIHDPVLPDDIDALFDDYYVDQHEEEERNFCKDLVSIGTLK 135

Query: 142 WHKAQTGAEVPRYAQKAPKIVNVKVSPRTIHQPR 172
           W KA+  A+VPRY +KAPKIVNVKVSPRTI QPR
Sbjct: 136 WPKARALAKVPRYMEKAPKIVNVKVSPRTIQQPR 166

[Close]

BLAST of Carg05958 vs. TrEMBL
Match: tr|V4SMQ7|V4SMQ7_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10033013mg PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.2e-42
Identity = 88/142 (61.97%), Postives = 112/142 (78.87%), Query Frame = 0


Query: 30  VAMDVVARRTSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWNLIQSSPWFREYWLQERFQ 89
           VAM+V+++R+SSSS S LNPNAP+F+P AYR VEDFSD+WW LIQSSPWFR+YWLQE + 
Sbjct: 3   VAMEVLSQRSSSSSTSTLNPNAPMFIPFAYRMVEDFSDEWWALIQSSPWFRDYWLQECYF 62

Query: 90  DPQNDFSFAENEEIVLPDLENIFEDFARQQEEEEFEFSKDLVPMGAFKWHKAQTGAEVPR 149
           DPQ+D  F++ +++VLPD++ IF D   Q+E EE +F KDLV +G  KW K     E  R
Sbjct: 63  DPQSDPLFSDFDDLVLPDVDEIFPD-KHQEEMEERDFCKDLVSLGTLKWKKGGAMIEKQR 122

Query: 150 YAQKAPKIVNVKVSPRTIHQPR 172
           Y++KAPKIV+VKVSPRTI QPR
Sbjct: 123 YSEKAPKIVSVKVSPRTIQQPR 143

[Close]

BLAST of Carg05958 vs. TrEMBL
Match: tr|A0A2H5NK34|A0A2H5NK34_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_052650 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.2e-42
Identity = 88/142 (61.97%), Postives = 112/142 (78.87%), Query Frame = 0


Query: 30  VAMDVVARRTSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWNLIQSSPWFREYWLQERFQ 89
           VAM+V+++R+SSSS S LNPNAP+F+P AYR VEDFSD+WW LIQSSPWFR+YWLQE + 
Sbjct: 3   VAMEVLSQRSSSSSTSTLNPNAPMFIPFAYRMVEDFSDEWWALIQSSPWFRDYWLQECYF 62

Query: 90  DPQNDFSFAENEEIVLPDLENIFEDFARQQEEEEFEFSKDLVPMGAFKWHKAQTGAEVPR 149
           DPQ+D  F++ +++VLPD++ IF D   Q+E EE +F KDLV +G  KW K     E  R
Sbjct: 63  DPQSDPLFSDFDDLVLPDVDEIFPD-KHQEEMEERDFCKDLVSLGTLKWKKGGAMIEKQR 122

Query: 150 YAQKAPKIVNVKVSPRTIHQPR 172
           Y++KAPKIV+VKVSPRTI QPR
Sbjct: 123 YSEKAPKIVSVKVSPRTIQQPR 143

The following BLAST results are available for this feature:

BLAST of Carg05958 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022990060.1	2.8e-73	98.57	protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita maxima]	[more]
XP_022992587.1	5.1e-67	91.43	protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita maxima]	[more]
XP_022939236.1	1.9e-66	90.71	protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita moschata]	[more]
XP_023550947.1	5.7e-66	90.00	protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita pepo subsp. pepo]	[more]
KGN45812.1	3.7e-65	87.14	Poly(A)-binding protein C-terminal interacting protein 6 [Cucumis sativus]	[more]

BLAST of Carg05958 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G41430.1	1.6e-14	33.55	dehydration-induced protein (ERD15)	[more]
AT4G14270.1	4.9e-11	30.99	Protein containing PAM2 motif which mediates interaction with the PABC domain of...	[more]

BLAST of Carg05958 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q39096\|ERD15_ARATH	2.9e-13	33.55	Protein EARLY RESPONSIVE TO DEHYDRATION 15 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]
sp\|Q94AR4\|CID2_ARATH	8.8e-10	30.99	Polyadenylate-binding protein-interacting protein 2 OS=Arabidopsis thaliana OX=3...	[more]

BLAST of Carg05958 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KBP8\|A0A0A0KBP8_CUCSA	2.4e-65	87.14	Poly(A)-binding protein C-terminal interacting protein 6 OS=Cucumis sativus OX=3...	[more]
tr\|Q6ELF9\|Q6ELF9_CUCSA	3.1e-60	86.36	Poly(A)-binding protein C-terminal interacting protein 6 OS=Cucumis sativus OX=3...	[more]
tr\|A0A2P4HGR7\|A0A2P4HGR7_QUESU	2.5e-46	66.23	Protein early responsive to dehydration 15 OS=Quercus suber OX=58331 GN=CFP56_45...	[more]
tr\|V4SMQ7\|V4SMQ7_9ROSI	2.2e-42	61.97	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10033013mg PE=4 ...	[more]
tr\|A0A2H5NK34\|A0A2H5NK34_CITUN	2.2e-42	61.97	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_052650 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg05958-RA	Carg05958-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33790:SF6	SUBFAMILY NOT NAMED	coord: 40..123
None	No IPR available	PANTHER	PTHR33790	FAMILY NOT NAMED	coord: 40..123

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg05958	Cla006610	Watermelon (97103) v1	carwmB0024
Carg05958	Csa6G013350	Cucumber (Chinese Long) v2	carcuB0023
Carg05958	MELO3C019981	Melon (DHL92) v3.5.1	carmeB0021
Carg05958	ClCG11G005940	Watermelon (Charleston Gray)	carwcgB0019
Carg05958	CSPI06G01910	Wild cucumber (PI 183967)	carcpiB0024
Carg05958	Cucsa.136830	Cucumber (Gy14) v1	carcgyB0019
Carg05958	CmaCh04G028850	Cucurbita maxima (Rimu)	carcmaB0033
Carg05958	CmaCh15G001480	Cucurbita maxima (Rimu)	carcmaB0030
Carg05958	CmoCh15G001620	Cucurbita moschata (Rifu)	carcmoB0031
Carg05958	CmoCh04G030100	Cucurbita moschata (Rifu)	carcmoB0033
Carg05958	Lsi03G002860	Bottle gourd (USVL1VR-Ls)	carlsiB017
Carg05958	Cp4.1LG01g21820	Cucurbita pepo (Zucchini)	carcpeB0034
Carg05958	Cp4.1LG13g07330	Cucurbita pepo (Zucchini)	carcpeB0031
Carg05958	MELO3C019981.2	Melon (DHL92) v3.6.1	carmedB0022
Carg05958	CsaV3_6G002060	Cucumber (Chinese Long) v3	carcucB0024
Carg05958	Cla97C11G212840	Watermelon (97103) v2	carwmbB0015
Carg05958	Bhi04G001863	Wax gourd	carwgoB0022

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg05958	Carg02140	Silver-seed gourd	carcarB020

The following block(s) are covering this gene:


Gene	Organism	Block
Carg05958	Watermelon (97103) v2	carwmbB0021
Carg05958	Wax gourd	carwgoB0025
Carg05958	Silver-seed gourd	carcarB022
Carg05958	Silver-seed gourd	carcarB025
Carg05958	Cucumber (Gy14) v2	carcgybB0023