CSPI06G01910 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI06G01910
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionPolyadenylate-binding-interacting protein 2-like protein
LocationChr6 : 1433880 .. 1434397 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGTTGTTACTCAAAGAAACTCCTCTTCCTCCGTTTCCATGTTGAATCCCAACGCTCCTTTGTTCGTTCCCATGGCCTATAGAACGGTGGAGGATTTCTCCGACCAGTGGTGGGAGCTCATCCAGTCCTCCCCCTGGTTCCGTGAGTACTGGCTTCAAGAACGCTTTCAAGATCCTCAAAATGAACTTTCTTTTGGTGAAAATGAAGAATTCGTCCTTCCGGATCTTGAAAGTTTCTTCGACGACTTCACTCGTCAACGTAAGAAACGAAATCGAGTCATCGAGTCAGTTTATTTCTTTTCCTTCTCTTAATCGAGCTTTCTAATTTGTTGTTTATTTTGTTTTCTTCTTCAGAGGAAGAGGAAGAATTGGAATTCTCGAAGGATTTAGTTCCAATGGGTGCTTTCAAATGGCAGAAGGCTCGGTCTGGAGCGGAGGTTCCTAAGTATGCTCAAAAGGCTCCCAAGATTGTGAACGTGAAAGTGAGTCCGAGAACGATTCACCAACCGAGATAG

mRNA sequence

ATGGATGTTGTTACTCAAAGAAACTCCTCTTCCTCCGTTTCCATGTTGAATCCCAACGCTCCTTTGTTCGTTCCCATGGCCTATAGAACGGTGGAGGATTTCTCCGACCAGTGGTGGGAGCTCATCCAGTCCTCCCCCTGGTTCCGTGAGTACTGGCTTCAAGAACGCTTTCAAGATCCTCAAAATGAACTTTCTTTTGGTGAAAATGAAGAATTCGTCCTTCCGGATCTTGAAAGTTTCTTCGACGACTTCACTCGTCAACAGGAAGAGGAAGAATTGGAATTCTCGAAGGATTTAGTTCCAATGGGTGCTTTCAAATGGCAGAAGGCTCGGTCTGGAGCGGAGGTTCCTAAGTATGCTCAAAAGGCTCCCAAGATTGTGAACGTGAAAGTGAGTCCGAGAACGATTCACCAACCGAGATAG

Coding sequence (CDS)

ATGGATGTTGTTACTCAAAGAAACTCCTCTTCCTCCGTTTCCATGTTGAATCCCAACGCTCCTTTGTTCGTTCCCATGGCCTATAGAACGGTGGAGGATTTCTCCGACCAGTGGTGGGAGCTCATCCAGTCCTCCCCCTGGTTCCGTGAGTACTGGCTTCAAGAACGCTTTCAAGATCCTCAAAATGAACTTTCTTTTGGTGAAAATGAAGAATTCGTCCTTCCGGATCTTGAAAGTTTCTTCGACGACTTCACTCGTCAACAGGAAGAGGAAGAATTGGAATTCTCGAAGGATTTAGTTCCAATGGGTGCTTTCAAATGGCAGAAGGCTCGGTCTGGAGCGGAGGTTCCTAAGTATGCTCAAAAGGCTCCCAAGATTGTGAACGTGAAAGTGAGTCCGAGAACGATTCACCAACCGAGATAG
Homology
[Close]
BLAST of CSPI06G01910 vs. Swiss-Prot
Match: ERD15_ARATH (Protein EARLY RESPONSIVE TO DEHYDRATION 15 OS=Arabidopsis thaliana GN=ERD15 PE=1 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 3.3e-15
Identity = 56/156 (35.90%), Postives = 76/156 (48.72%), Query Frame = 1 

Query: 14  SMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDPQNELSFGEN---- 73
           S LNP+APLF+P A R VEDFS +WW+L+ +S W+ +YW+ ++ Q        GEN    
Sbjct: 9   STLNPDAPLFIPAAVRQVEDFSPEWWQLVTTSTWYPDYWISQQQQGADGFYDNGENENGG 68

Query: 74  ----------EEFVLPDLESFFDDFTRQ-----------QEEEELEFSK--DLVPMGAFK 133
                     E F   D+E FFD    +           Q   E  F K  ++V   +  
Sbjct: 69  GHIDVADLLPESFDFDDMEDFFDTDAAEFDQGFDGRMYYQAPSEFGFGKNGEMVKKSSGN 128

Query: 134 WQKARSGAEVPKYAQKAPKIVNVKV--SPRTIHQPR 141
            +  RS  E  KYA+K  K  N +V  +PR IHQPR
Sbjct: 129 -RSPRSIVEPAKYAEKPAKWGNQRVAAAPRNIHQPR 163

[Close]
BLAST of CSPI06G01910 vs. Swiss-Prot
Match: CID2_ARATH (Polyadenylate-binding protein-interacting protein 2 OS=Arabidopsis thaliana GN=CID2 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.4e-10
Identity = 48/140 (34.29%), Postives = 72/140 (51.43%), Query Frame = 1 

Query: 13  VSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDPQNELSFGEN--- 72
           +S LNPNAP+F P+ +R VEDFS +WW+L+ +S WFR++WL     + +NE   G++   
Sbjct: 9   LSTLNPNAPVFDPVEFREVEDFSPKWWDLVTTSKWFRDFWLS---ANSENEFLGGDDFSV 68

Query: 73  --EEF----VLPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYAQKA 132
             EEF       D  S  D  T       L+   ++      K  +++  +  PKY QK 
Sbjct: 69  MEEEFEEMIASSDGGSMADTVTEADVASYLKMLLNIAESTKEKIYRSKVSSCSPKYNQK- 128

Query: 133 PKIVNVKVSPRT---IHQPR 141
            K +N   + R    I+QPR
Sbjct: 129 -KYMNPNFNCRRNHHIYQPR 143

[Close]
BLAST of CSPI06G01910 vs. TrEMBL
Match: A0A0A0KBP8_CUCSA (Poly(A)-binding protein C-terminal interacting protein 6 OS=Cucumis sativus GN=Csa_6G013350 PE=4 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 1.7e-74
Identity = 139/140 (99.29%), Postives = 140/140 (100.00%), Query Frame = 1 

Query: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDP 60
           MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDP
Sbjct: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDP 60

Query: 61  QNELSFGENEEFVLPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA 120
           QNELSFGENEEF+LPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA
Sbjct: 61  QNELSFGENEEFILPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA 120

Query: 121 QKAPKIVNVKVSPRTIHQPR 141
           QKAPKIVNVKVSPRTIHQPR
Sbjct: 121 QKAPKIVNVKVSPRTIHQPR 140

[Close]
BLAST of CSPI06G01910 vs. TrEMBL
Match: Q6ELF9_CUCSA (Poly(A)-binding protein C-terminal interacting protein 6 OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 2.8e-69
Identity = 131/132 (99.24%), Postives = 132/132 (100.00%), Query Frame = 1 

Query: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDP 60
           MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDP
Sbjct: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDP 60

Query: 61  QNELSFGENEEFVLPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA 120
           QNELSFGENEEF+LPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA
Sbjct: 61  QNELSFGENEEFILPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA 120

Query: 121 QKAPKIVNVKVS 133
           QKAPKIVNVKVS
Sbjct: 121 QKAPKIVNVKVS 132

[Close]
BLAST of CSPI06G01910 vs. TrEMBL
Match: W9QXE6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_012280 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.1e-41
Identity = 88/143 (61.54%), Postives = 111/143 (77.62%), Query Frame = 1 

Query: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDP 60
           MDV++ R+SSSS S LNPNAP+FVP+AYRTVEDFSD+WW L+QSSPWFR+YWLQER+ DP
Sbjct: 3   MDVISGRSSSSS-STLNPNAPMFVPLAYRTVEDFSDEWWALVQSSPWFRDYWLQERYCDP 62

Query: 61  QNELSFGENEEFVLPDLESFFDD---FTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVP 120
           Q + SF +  +  L D++SFFDD     + +EE E ++SK LV +GA KW+K R+ AE P
Sbjct: 63  QTDPSFFDIYDLALLDVDSFFDDDVSSMKTEEEGERDYSKKLVRLGALKWRKGRALAEAP 122

Query: 121 KYAQKAPKIVNVKVSPRTIHQPR 141
           +Y +K PKIV VK SPRTI QPR
Sbjct: 123 RYIEKVPKIVKVKPSPRTIQQPR 144

[Close]
BLAST of CSPI06G01910 vs. TrEMBL
Match: V4SMQ7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033013mg PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 1.9e-41
Identity = 84/140 (60.00%), Postives = 109/140 (77.86%), Query Frame = 1 

Query: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDP 60
           M+V++QR+SSSS S LNPNAP+F+P AYR VEDFSD+WW LIQSSPWFR+YWLQE + DP
Sbjct: 5   MEVLSQRSSSSSTSTLNPNAPMFIPFAYRMVEDFSDEWWALIQSSPWFRDYWLQECYFDP 64

Query: 61  QNELSFGENEEFVLPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA 120
           Q++  F + ++ VLPD++  F D   Q+E EE +F KDLV +G  KW+K  +  E  +Y+
Sbjct: 65  QSDPLFSDFDDLVLPDVDEIFPD-KHQEEMEERDFCKDLVSLGTLKWKKGGAMIEKQRYS 124

Query: 121 QKAPKIVNVKVSPRTIHQPR 141
           +KAPKIV+VKVSPRTI QPR
Sbjct: 125 EKAPKIVSVKVSPRTIQQPR 143

[Close]
BLAST of CSPI06G01910 vs. TrEMBL
Match: A0A067E1T5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032323mg PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 2.4e-41
Identity = 84/140 (60.00%), Postives = 109/140 (77.86%), Query Frame = 1 

Query: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDP 60
           M+V++QR+SSSS S LNPNAP+F+P AYR VEDFSD+WW LIQSSPWFR+YWLQE + DP
Sbjct: 5   MEVLSQRSSSSSTSTLNPNAPMFIPFAYRMVEDFSDEWWALIQSSPWFRDYWLQECYFDP 64

Query: 61  QNELSFGENEEFVLPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA 120
           Q++  F + ++ VLPD++  F D   Q+E EE +F KDLV +G  KW+K  +  E  +Y+
Sbjct: 65  QSDPLFSDFDDLVLPDVDEIFPD-KHQEEIEERDFCKDLVSLGTLKWKKGGAMIEKQRYS 124

Query: 121 QKAPKIVNVKVSPRTIHQPR 141
           +KAPKIV+VKVSPRTI QPR
Sbjct: 125 EKAPKIVSVKVSPRTIQQPR 143

[Close]
BLAST of CSPI06G01910 vs. TAIR10
Match: AT2G41430.1 (AT2G41430.1 dehydration-induced protein (ERD15))

HSP 1 Score: 82.8 bits (203), Expect = 1.9e-16
Identity = 56/156 (35.90%), Postives = 76/156 (48.72%), Query Frame = 1 

Query: 14  SMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDPQNELSFGEN---- 73
           S LNP+APLF+P A R VEDFS +WW+L+ +S W+ +YW+ ++ Q        GEN    
Sbjct: 9   STLNPDAPLFIPAAVRQVEDFSPEWWQLVTTSTWYPDYWISQQQQGADGFYDNGENENGG 68

Query: 74  ----------EEFVLPDLESFFDDFTRQ-----------QEEEELEFSK--DLVPMGAFK 133
                     E F   D+E FFD    +           Q   E  F K  ++V   +  
Sbjct: 69  GHIDVADLLPESFDFDDMEDFFDTDAAEFDQGFDGRMYYQAPSEFGFGKNGEMVKKSSGN 128

Query: 134 WQKARSGAEVPKYAQKAPKIVNVKV--SPRTIHQPR 141
            +  RS  E  KYA+K  K  N +V  +PR IHQPR
Sbjct: 129 -RSPRSIVEPAKYAEKPAKWGNQRVAAAPRNIHQPR 163

[Close]
BLAST of CSPI06G01910 vs. TAIR10
Match: AT4G14270.1 (AT4G14270.1 Protein containing PAM2 motif which mediates interaction with the PABC domain of polyadenyl binding proteins.)

HSP 1 Score: 67.4 bits (163), Expect = 8.1e-12
Identity = 48/140 (34.29%), Postives = 72/140 (51.43%), Query Frame = 1 

Query: 13  VSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDPQNELSFGEN--- 72
           +S LNPNAP+F P+ +R VEDFS +WW+L+ +S WFR++WL     + +NE   G++   
Sbjct: 9   LSTLNPNAPVFDPVEFREVEDFSPKWWDLVTTSKWFRDFWLS---ANSENEFLGGDDFSV 68

Query: 73  --EEF----VLPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYAQKA 132
             EEF       D  S  D  T       L+   ++      K  +++  +  PKY QK 
Sbjct: 69  MEEEFEEMIASSDGGSMADTVTEADVASYLKMLLNIAESTKEKIYRSKVSSCSPKYNQK- 128

Query: 133 PKIVNVKVSPRT---IHQPR 141
            K +N   + R    I+QPR
Sbjct: 129 -KYMNPNFNCRRNHHIYQPR 143

[Close]
BLAST of CSPI06G01910 vs. NCBI nr
Match: gi|700190608|gb|KGN45812.1| (Poly(A)-binding protein C-terminal interacting protein 6 [Cucumis sativus])

HSP 1 Score: 286.6 bits (732), Expect = 2.4e-74
Identity = 139/140 (99.29%), Postives = 140/140 (100.00%), Query Frame = 1 

Query: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDP 60
           MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDP
Sbjct: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDP 60

Query: 61  QNELSFGENEEFVLPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA 120
           QNELSFGENEEF+LPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA
Sbjct: 61  QNELSFGENEEFILPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA 120

Query: 121 QKAPKIVNVKVSPRTIHQPR 141
           QKAPKIVNVKVSPRTIHQPR
Sbjct: 121 QKAPKIVNVKVSPRTIHQPR 140

[Close]
BLAST of CSPI06G01910 vs. NCBI nr
Match: gi|821595273|ref|NP_001295813.1| (protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucumis sativus])

HSP 1 Score: 269.2 bits (687), Expect = 4.0e-69
Identity = 131/132 (99.24%), Postives = 132/132 (100.00%), Query Frame = 1 

Query: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDP 60
           MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDP
Sbjct: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDP 60

Query: 61  QNELSFGENEEFVLPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA 120
           QNELSFGENEEF+LPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA
Sbjct: 61  QNELSFGENEEFILPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA 120

Query: 121 QKAPKIVNVKVS 133
           QKAPKIVNVKVS
Sbjct: 121 QKAPKIVNVKVS 132

[Close]
BLAST of CSPI06G01910 vs. NCBI nr
Match: gi|703063768|ref|XP_010087036.1| (hypothetical protein L484_012280 [Morus notabilis])

HSP 1 Score: 177.6 bits (449), Expect = 1.6e-41
Identity = 88/143 (61.54%), Postives = 111/143 (77.62%), Query Frame = 1 

Query: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDP 60
           MDV++ R+SSSS S LNPNAP+FVP+AYRTVEDFSD+WW L+QSSPWFR+YWLQER+ DP
Sbjct: 3   MDVISGRSSSSS-STLNPNAPMFVPLAYRTVEDFSDEWWALVQSSPWFRDYWLQERYCDP 62

Query: 61  QNELSFGENEEFVLPDLESFFDD---FTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVP 120
           Q + SF +  +  L D++SFFDD     + +EE E ++SK LV +GA KW+K R+ AE P
Sbjct: 63  QTDPSFFDIYDLALLDVDSFFDDDVSSMKTEEEGERDYSKKLVRLGALKWRKGRALAEAP 122

Query: 121 KYAQKAPKIVNVKVSPRTIHQPR 141
           +Y +K PKIV VK SPRTI QPR
Sbjct: 123 RYIEKVPKIVKVKPSPRTIQQPR 144

[Close]
BLAST of CSPI06G01910 vs. NCBI nr
Match: gi|567886632|ref|XP_006435838.1| (hypothetical protein CICLE_v10033013mg [Citrus clementina])

HSP 1 Score: 176.8 bits (447), Expect = 2.7e-41
Identity = 84/140 (60.00%), Postives = 109/140 (77.86%), Query Frame = 1 

Query: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDP 60
           M+V++QR+SSSS S LNPNAP+F+P AYR VEDFSD+WW LIQSSPWFR+YWLQE + DP
Sbjct: 5   MEVLSQRSSSSSTSTLNPNAPMFIPFAYRMVEDFSDEWWALIQSSPWFRDYWLQECYFDP 64

Query: 61  QNELSFGENEEFVLPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA 120
           Q++  F + ++ VLPD++  F D   Q+E EE +F KDLV +G  KW+K  +  E  +Y+
Sbjct: 65  QSDPLFSDFDDLVLPDVDEIFPD-KHQEEMEERDFCKDLVSLGTLKWKKGGAMIEKQRYS 124

Query: 121 QKAPKIVNVKVSPRTIHQPR 141
           +KAPKIV+VKVSPRTI QPR
Sbjct: 125 EKAPKIVSVKVSPRTIQQPR 143

[Close]
BLAST of CSPI06G01910 vs. NCBI nr
Match: gi|641825580|gb|KDO44846.1| (hypothetical protein CISIN_1g032323mg [Citrus sinensis])

HSP 1 Score: 176.4 bits (446), Expect = 3.5e-41
Identity = 84/140 (60.00%), Postives = 109/140 (77.86%), Query Frame = 1 

Query: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDP 60
           M+V++QR+SSSS S LNPNAP+F+P AYR VEDFSD+WW LIQSSPWFR+YWLQE + DP
Sbjct: 5   MEVLSQRSSSSSTSTLNPNAPMFIPFAYRMVEDFSDEWWALIQSSPWFRDYWLQECYFDP 64

Query: 61  QNELSFGENEEFVLPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA 120
           Q++  F + ++ VLPD++  F D   Q+E EE +F KDLV +G  KW+K  +  E  +Y+
Sbjct: 65  QSDPLFSDFDDLVLPDVDEIFPD-KHQEEIEERDFCKDLVSLGTLKWKKGGAMIEKQRYS 124

Query: 121 QKAPKIVNVKVSPRTIHQPR 141
           +KAPKIV+VKVSPRTI QPR
Sbjct: 125 EKAPKIVSVKVSPRTIQQPR 143

The following BLAST results are available for this feature:
BLAST of CSPI06G01910 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ERD15_ARATH3.3e-1535.90Protein EARLY RESPONSIVE TO DEHYDRATION 15 OS=Arabidopsis thaliana GN=ERD15 PE=1... [more]
CID2_ARATH1.4e-1034.29Polyadenylate-binding protein-interacting protein 2 OS=Arabidopsis thaliana GN=C... [more]
BLAST of CSPI06G01910 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KBP8_CUCSA1.7e-7499.29Poly(A)-binding protein C-terminal interacting protein 6 OS=Cucumis sativus GN=C... [more]
Q6ELF9_CUCSA2.8e-6999.24Poly(A)-binding protein C-terminal interacting protein 6 OS=Cucumis sativus PE=2... [more]
W9QXE6_9ROSA1.1e-4161.54Uncharacterized protein OS=Morus notabilis GN=L484_012280 PE=4 SV=1[more]
V4SMQ7_9ROSI1.9e-4160.00Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033013mg PE=4 SV=1[more]
A0A067E1T5_CITSI2.4e-4160.00Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032323mg PE=4 SV=1[more]
BLAST of CSPI06G01910 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G41430.11.9e-1635.90 dehydration-induced protein (ERD15)[more]
AT4G14270.18.1e-1234.29 Protein containing PAM2 motif which mediates interaction with the PA... [more]
BLAST of CSPI06G01910 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700190608|gb|KGN45812.1|2.4e-7499.29Poly(A)-binding protein C-terminal interacting protein 6 [Cucumis sativus][more]
gi|821595273|ref|NP_001295813.1|4.0e-6999.24protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucumis sativus][more]
gi|703063768|ref|XP_010087036.1|1.6e-4161.54hypothetical protein L484_012280 [Morus notabilis][more]
gi|567886632|ref|XP_006435838.1|2.7e-4160.00hypothetical protein CICLE_v10033013mg [Citrus clementina][more]
gi|641825580|gb|KDO44846.1|3.5e-4160.00hypothetical protein CISIN_1g032323mg [Citrus sinensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G01910.1CSPI06G01910.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33790FAMILY NOT NAMEDcoord: 6..140
score: 2.3
NoneNo IPR availablePANTHERPTHR33790:SF3SUBFAMILY NOT NAMEDcoord: 6..140
score: 2.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI06G01910Cla006610Watermelon (97103) v1cpiwmB552
CSPI06G01910Csa6G013350Cucumber (Chinese Long) v2cpicuB314
CSPI06G01910MELO3C019981Melon (DHL92) v3.5.1cpimeB476
CSPI06G01910ClCG11G005940Watermelon (Charleston Gray)cpiwcgB450
CSPI06G01910Lsi03G002860Bottle gourd (USVL1VR-Ls)cpilsiB451
CSPI06G01910MELO3C019981.2Melon (DHL92) v3.6.1cpimedB464
CSPI06G01910CsaV3_6G002060Cucumber (Chinese Long) v3cpicucB364
CSPI06G01910Cla97C11G212840Watermelon (97103) v2cpiwmbB447
CSPI06G01910Bhi04G001863Wax gourdcpiwgoB591
CSPI06G01910Cucsa.136830Cucumber (Gy14) v1cgycpiB198
CSPI06G01910CmaCh04G028850Cucurbita maxima (Rimu)cmacpiB777
CSPI06G01910CmaCh15G001480Cucurbita maxima (Rimu)cmacpiB314
CSPI06G01910CmoCh04G030100Cucurbita moschata (Rifu)cmocpiB768
CSPI06G01910Cp4.1LG13g07330Cucurbita pepo (Zucchini)cpecpiB199
CSPI06G01910Cp4.1LG01g21820Cucurbita pepo (Zucchini)cpecpiB461
CSPI06G01910Carg02140Silver-seed gourdcarcpiB0301
CSPI06G01910Carg05958Silver-seed gourdcarcpiB0024
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI06G01910Cucurbita moschata (Rifu)cmocpiB305
CSPI06G01910Cucurbita moschata (Rifu)cmocpiB682
CSPI06G01910Cucurbita moschata (Rifu)cmocpiB773
CSPI06G01910Cucumber (Chinese Long) v2cpicuB298
CSPI06G01910Cucumber (Chinese Long) v2cpicuB308
CSPI06G01910Melon (DHL92) v3.5.1cpimeB454
CSPI06G01910Melon (DHL92) v3.5.1cpimeB517
CSPI06G01910Watermelon (Charleston Gray)cpiwcgB491
CSPI06G01910Watermelon (Charleston Gray)cpiwcgB516
CSPI06G01910Watermelon (97103) v1cpiwmB497
CSPI06G01910Watermelon (97103) v1cpiwmB502
CSPI06G01910Watermelon (97103) v1cpiwmB527
CSPI06G01910Cucurbita pepo (Zucchini)cpecpiB082
CSPI06G01910Cucurbita pepo (Zucchini)cpecpiB466
CSPI06G01910Bottle gourd (USVL1VR-Ls)cpilsiB437
CSPI06G01910Bottle gourd (USVL1VR-Ls)cpilsiB465
CSPI06G01910Melon (DHL92) v3.6.1cpimedB500
CSPI06G01910Cucumber (Gy14) v2cgybcpiB187
CSPI06G01910Cucumber (Gy14) v2cgybcpiB288
CSPI06G01910Silver-seed gourdcarcpiB0592
CSPI06G01910Silver-seed gourdcarcpiB0709
CSPI06G01910Cucumber (Chinese Long) v3cpicucB348
CSPI06G01910Cucumber (Chinese Long) v3cpicucB357
CSPI06G01910Watermelon (97103) v2cpiwmbB483
CSPI06G01910Watermelon (97103) v2cpiwmbB508
CSPI06G01910Wax gourdcpiwgoB632
CSPI06G01910Wild cucumber (PI 183967)cpicpiB159
CSPI06G01910Cucumber (Gy14) v1cgycpiB184
CSPI06G01910Cucumber (Gy14) v1cgycpiB213
CSPI06G01910Cucurbita maxima (Rimu)cmacpiB690
CSPI06G01910Cucurbita maxima (Rimu)cmacpiB783
CSPI06G01910Cucurbita maxima (Rimu)cmacpiB784